; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc09g0246951 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc09g0246951
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionReverse transcriptase
Genome locationCMiso1.1chr09:11271559..11272623
RNA-Seq ExpressionCmc09g0246951
SyntenyCmc09g0246951
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0004190 - aspartic-type endopeptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001584 - Integrase, catalytic core
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR041588 - Integrase zinc-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047501.1 hypothetical protein E6C27_scaffold498G001280 [Cucumis melo var. makuwa]8.9e-20398.56Show/hide
Query:  MVKQGRLCVLNISELKNAILEEAHSSAYAIHPGSTKMYRTLKKIYWWSGMKQEIAEYVDKCLICQQVKPVRLKPGGFLNPLPVPEWKWEHITMDFLFGLP
        MVKQGRLCVLNISELKNAILEEAHSSAYAIHPGSTKMYRTLKK YWWSGMKQEIAEYVDKCLICQQVKPVRL+PGGFLNPLPVPEWKWEHITMDFLFGLP
Subjt:  MVKQGRLCVLNISELKNAILEEAHSSAYAIHPGSTKMYRTLKKIYWWSGMKQEIAEYVDKCLICQQVKPVRLKPGGFLNPLPVPEWKWEHITMDFLFGLP

Query:  RTSNGHDGIWVIVDRLTKMARFIPIKATSTLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTRLKFSTSFHPQTDGQYERTIQTLEDM
        RTSNGHDGIWVIVDRLTKMARFIPIKATSTLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTRLKFSTSFHPQTDGQYERTIQTLEDM
Subjt:  RTSNGHDGIWVIVDRLTKMARFIPIKATSTLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTRLKFSTSFHPQTDGQYERTIQTLEDM

Query:  LRACVFQLKGSWDTHLPLMEFAYNNNYQSSISMAPYEVLYERPCRTPVCWNEVGERKLVGHELVQITTNNIKLIRENLRIAQDRQKSYADKRRRNLEFQV
        LRACVFQLKGSWDTHLPLMEFAYNNNYQSSISMAPYEVLYERPCRTPVCWNEVGERKLVGHELVQITTNNIKLIRENLRIA DRQKSYADKRRRNLEFQV
Subjt:  LRACVFQLKGSWDTHLPLMEFAYNNNYQSSISMAPYEVLYERPCRTPVCWNEVGERKLVGHELVQITTNNIKLIRENLRIAQDRQKSYADKRRRNLEFQV

Query:  GDQVFLKLSPWRGVIRFGRKGKLSPRYTGPYQITERVGPVAYRLELPV
        GDQVFLKLSPWRGVIRFGRKGKLSPRY GPYQITERVGP AYRLELPV
Subjt:  GDQVFLKLSPWRGVIRFGRKGKLSPRYTGPYQITERVGPVAYRLELPV

KAA0050493.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]4.1e-19293.14Show/hide
Query:  MVKQGRLCVLNISELKNAILEEAHSSAYAIHPGSTKMYRTLKKIYWWSGMKQEIAEYVDKCLICQQVKPVRLKPGGFLNPLPVPEWKWEHITMDFLFGLP
        +VKQGRLCV NISELKNAILEEAHSSAYA+HPGSTKMYRTLKK YWWSGMKQEIAEYVD+CLICQQVKPVR +PGGFLNPLPVPEWKWEHITMDFLFGLP
Subjt:  MVKQGRLCVLNISELKNAILEEAHSSAYAIHPGSTKMYRTLKKIYWWSGMKQEIAEYVDKCLICQQVKPVRLKPGGFLNPLPVPEWKWEHITMDFLFGLP

Query:  RTSNGHDGIWVIVDRLTKMARFIPIKATSTLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTRLKFSTSFHPQTDGQYERTIQTLEDM
        RTS+GHDGIWVIVDRLTK  RFIPIK TSTLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGT LKFSTSFHPQTDGQ ERTIQTLEDM
Subjt:  RTSNGHDGIWVIVDRLTKMARFIPIKATSTLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTRLKFSTSFHPQTDGQYERTIQTLEDM

Query:  LRACVFQLKGSWDTHLPLMEFAYNNNYQSSISMAPYEVLYERPCRTPVCWNEVGERKLVGHELVQITTNNIKLIRENLRIAQDRQKSYADKRRRNLEFQV
        LRACV QLKGSWDTHLPLMEFAYNNNYQSSI MAPYE LY RPCRTPVCWNEVGERKLVG ELVQITTNNIKLIRENLR AQDRQKSYADKRRRNLEFQV
Subjt:  LRACVFQLKGSWDTHLPLMEFAYNNNYQSSISMAPYEVLYERPCRTPVCWNEVGERKLVGHELVQITTNNIKLIRENLRIAQDRQKSYADKRRRNLEFQV

Query:  GDQVFLKLSPWRGVIRFGRKGKLSPRYTGPYQITERVGPVAYRLELPVRV
        GDQVFLKLSPWRGVIRFGRKGKLSPRY GPYQITERVGP AYRLELP+ +
Subjt:  GDQVFLKLSPWRGVIRFGRKGKLSPRYTGPYQITERVGPVAYRLELPVRV

KAA0050527.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]4.1e-19293.14Show/hide
Query:  MVKQGRLCVLNISELKNAILEEAHSSAYAIHPGSTKMYRTLKKIYWWSGMKQEIAEYVDKCLICQQVKPVRLKPGGFLNPLPVPEWKWEHITMDFLFGLP
        +VKQGRLCV NISELKNAILEEAHSSAYA+HPGSTKMYRTLKK YWWSGMKQEIAEYVD+CLICQQVKPVR +PGGFLNPLPVPEWKWEHITMDFLFGLP
Subjt:  MVKQGRLCVLNISELKNAILEEAHSSAYAIHPGSTKMYRTLKKIYWWSGMKQEIAEYVDKCLICQQVKPVRLKPGGFLNPLPVPEWKWEHITMDFLFGLP

Query:  RTSNGHDGIWVIVDRLTKMARFIPIKATSTLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTRLKFSTSFHPQTDGQYERTIQTLEDM
        RTS+GHDGIWVIVDRLTK  RFIPIK TSTLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGT LKFSTSFHPQTDGQ ERTIQTLEDM
Subjt:  RTSNGHDGIWVIVDRLTKMARFIPIKATSTLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTRLKFSTSFHPQTDGQYERTIQTLEDM

Query:  LRACVFQLKGSWDTHLPLMEFAYNNNYQSSISMAPYEVLYERPCRTPVCWNEVGERKLVGHELVQITTNNIKLIRENLRIAQDRQKSYADKRRRNLEFQV
        LRACV QLKGSWDTHLPLMEFAYNNNYQSSI MAPYE LY RPCRTPVCWNEVGERKLVG ELVQITTNNIKLIRENLR AQDRQKSYADKRRRNLEFQV
Subjt:  LRACVFQLKGSWDTHLPLMEFAYNNNYQSSISMAPYEVLYERPCRTPVCWNEVGERKLVGHELVQITTNNIKLIRENLRIAQDRQKSYADKRRRNLEFQV

Query:  GDQVFLKLSPWRGVIRFGRKGKLSPRYTGPYQITERVGPVAYRLELPVRV
        GDQVFLKLSPWRGVIRFGRKGKLSPRY GPYQITERVGP AYRLELP+ +
Subjt:  GDQVFLKLSPWRGVIRFGRKGKLSPRYTGPYQITERVGPVAYRLELPVRV

KAA0053246.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]4.1e-19293.14Show/hide
Query:  MVKQGRLCVLNISELKNAILEEAHSSAYAIHPGSTKMYRTLKKIYWWSGMKQEIAEYVDKCLICQQVKPVRLKPGGFLNPLPVPEWKWEHITMDFLFGLP
        +VKQGRLCV NISELKNAILEEAHSSAYA+HPGSTKMYRTLKK YWWSGMKQEIAEYVD+CLICQQVKPVR +PGGFLNPLPVPEWKWEHITMDFLFGLP
Subjt:  MVKQGRLCVLNISELKNAILEEAHSSAYAIHPGSTKMYRTLKKIYWWSGMKQEIAEYVDKCLICQQVKPVRLKPGGFLNPLPVPEWKWEHITMDFLFGLP

Query:  RTSNGHDGIWVIVDRLTKMARFIPIKATSTLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTRLKFSTSFHPQTDGQYERTIQTLEDM
        RTS+GHDGIWVIVDRLTK  RFIPIK TSTLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGT LKFSTSFHPQTDGQ ERTIQTLEDM
Subjt:  RTSNGHDGIWVIVDRLTKMARFIPIKATSTLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTRLKFSTSFHPQTDGQYERTIQTLEDM

Query:  LRACVFQLKGSWDTHLPLMEFAYNNNYQSSISMAPYEVLYERPCRTPVCWNEVGERKLVGHELVQITTNNIKLIRENLRIAQDRQKSYADKRRRNLEFQV
        LRACV QLKGSWDTHLPLMEFAYNNNYQSSI MAPYE LY RPCRTPVCWNEVGERKLVG ELVQITTNNIKLIRENLR AQDRQKSYADKRRRNLEFQV
Subjt:  LRACVFQLKGSWDTHLPLMEFAYNNNYQSSISMAPYEVLYERPCRTPVCWNEVGERKLVGHELVQITTNNIKLIRENLRIAQDRQKSYADKRRRNLEFQV

Query:  GDQVFLKLSPWRGVIRFGRKGKLSPRYTGPYQITERVGPVAYRLELPVRV
        GDQVFLKLSPWRGVIRFGRKGKLSPRY GPYQITERVGP AYRLELP+ +
Subjt:  GDQVFLKLSPWRGVIRFGRKGKLSPRYTGPYQITERVGPVAYRLELPVRV

KAA0059912.1 reverse transcriptase [Cucumis melo var. makuwa]4.1e-19293.14Show/hide
Query:  MVKQGRLCVLNISELKNAILEEAHSSAYAIHPGSTKMYRTLKKIYWWSGMKQEIAEYVDKCLICQQVKPVRLKPGGFLNPLPVPEWKWEHITMDFLFGLP
        +VKQGRLCV NISELKNAILEEAHSSAYA+HPGSTKMYRTLKK YWWSGMKQEIAEYVD+CLICQQVKPVR +PGGFLNPLPVPEWKWEHITMDFLFGLP
Subjt:  MVKQGRLCVLNISELKNAILEEAHSSAYAIHPGSTKMYRTLKKIYWWSGMKQEIAEYVDKCLICQQVKPVRLKPGGFLNPLPVPEWKWEHITMDFLFGLP

Query:  RTSNGHDGIWVIVDRLTKMARFIPIKATSTLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTRLKFSTSFHPQTDGQYERTIQTLEDM
        RTS+GHDGIWVIVDRLTK  RFIPIK TSTLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGT LKFSTSFHPQTDGQ ERTIQTLEDM
Subjt:  RTSNGHDGIWVIVDRLTKMARFIPIKATSTLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTRLKFSTSFHPQTDGQYERTIQTLEDM

Query:  LRACVFQLKGSWDTHLPLMEFAYNNNYQSSISMAPYEVLYERPCRTPVCWNEVGERKLVGHELVQITTNNIKLIRENLRIAQDRQKSYADKRRRNLEFQV
        LRACV QLKGSWDTHLPLMEFAYNNNYQSSI MAPYE LY RPCRTPVCWNEVGERKLVG ELVQITTNNIKLIRENLR AQDRQKSYADKRRRNLEFQV
Subjt:  LRACVFQLKGSWDTHLPLMEFAYNNNYQSSISMAPYEVLYERPCRTPVCWNEVGERKLVGHELVQITTNNIKLIRENLRIAQDRQKSYADKRRRNLEFQV

Query:  GDQVFLKLSPWRGVIRFGRKGKLSPRYTGPYQITERVGPVAYRLELPVRV
        GDQVFLKLSPWRGVIRFGRKGKLSPRY GPYQITERVGP AYRLELP+ +
Subjt:  GDQVFLKLSPWRGVIRFGRKGKLSPRYTGPYQITERVGPVAYRLELPVRV

TrEMBL top hitse value%identityAlignment
A0A5A7T1Y5 Reverse transcriptase2.0e-19293.14Show/hide
Query:  MVKQGRLCVLNISELKNAILEEAHSSAYAIHPGSTKMYRTLKKIYWWSGMKQEIAEYVDKCLICQQVKPVRLKPGGFLNPLPVPEWKWEHITMDFLFGLP
        +VKQGRLCV NISELKNAILEEAHSSAYA+HPGSTKMYRTLKK YWWSGMKQEIAEYVD+CLICQQVKPVR +PGGFLNPLPVPEWKWEHITMDFLFGLP
Subjt:  MVKQGRLCVLNISELKNAILEEAHSSAYAIHPGSTKMYRTLKKIYWWSGMKQEIAEYVDKCLICQQVKPVRLKPGGFLNPLPVPEWKWEHITMDFLFGLP

Query:  RTSNGHDGIWVIVDRLTKMARFIPIKATSTLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTRLKFSTSFHPQTDGQYERTIQTLEDM
        RTS+GHDGIWVIVDRLTK  RFIPIK TSTLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGT LKFSTSFHPQTDGQ ERTIQTLEDM
Subjt:  RTSNGHDGIWVIVDRLTKMARFIPIKATSTLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTRLKFSTSFHPQTDGQYERTIQTLEDM

Query:  LRACVFQLKGSWDTHLPLMEFAYNNNYQSSISMAPYEVLYERPCRTPVCWNEVGERKLVGHELVQITTNNIKLIRENLRIAQDRQKSYADKRRRNLEFQV
        LRACV QLKGSWDTHLPLMEFAYNNNYQSSI MAPYE LY RPCRTPVCWNEVGERKLVG ELVQITTNNIKLIRENLR AQDRQKSYADKRRRNLEFQV
Subjt:  LRACVFQLKGSWDTHLPLMEFAYNNNYQSSISMAPYEVLYERPCRTPVCWNEVGERKLVGHELVQITTNNIKLIRENLRIAQDRQKSYADKRRRNLEFQV

Query:  GDQVFLKLSPWRGVIRFGRKGKLSPRYTGPYQITERVGPVAYRLELPVRV
        GDQVFLKLSPWRGVIRFGRKGKLSPRY GPYQITERVGP AYRLELP+ +
Subjt:  GDQVFLKLSPWRGVIRFGRKGKLSPRYTGPYQITERVGPVAYRLELPVRV

A0A5A7U1N9 Integrase catalytic domain-containing protein4.3e-20398.56Show/hide
Query:  MVKQGRLCVLNISELKNAILEEAHSSAYAIHPGSTKMYRTLKKIYWWSGMKQEIAEYVDKCLICQQVKPVRLKPGGFLNPLPVPEWKWEHITMDFLFGLP
        MVKQGRLCVLNISELKNAILEEAHSSAYAIHPGSTKMYRTLKK YWWSGMKQEIAEYVDKCLICQQVKPVRL+PGGFLNPLPVPEWKWEHITMDFLFGLP
Subjt:  MVKQGRLCVLNISELKNAILEEAHSSAYAIHPGSTKMYRTLKKIYWWSGMKQEIAEYVDKCLICQQVKPVRLKPGGFLNPLPVPEWKWEHITMDFLFGLP

Query:  RTSNGHDGIWVIVDRLTKMARFIPIKATSTLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTRLKFSTSFHPQTDGQYERTIQTLEDM
        RTSNGHDGIWVIVDRLTKMARFIPIKATSTLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTRLKFSTSFHPQTDGQYERTIQTLEDM
Subjt:  RTSNGHDGIWVIVDRLTKMARFIPIKATSTLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTRLKFSTSFHPQTDGQYERTIQTLEDM

Query:  LRACVFQLKGSWDTHLPLMEFAYNNNYQSSISMAPYEVLYERPCRTPVCWNEVGERKLVGHELVQITTNNIKLIRENLRIAQDRQKSYADKRRRNLEFQV
        LRACVFQLKGSWDTHLPLMEFAYNNNYQSSISMAPYEVLYERPCRTPVCWNEVGERKLVGHELVQITTNNIKLIRENLRIA DRQKSYADKRRRNLEFQV
Subjt:  LRACVFQLKGSWDTHLPLMEFAYNNNYQSSISMAPYEVLYERPCRTPVCWNEVGERKLVGHELVQITTNNIKLIRENLRIAQDRQKSYADKRRRNLEFQV

Query:  GDQVFLKLSPWRGVIRFGRKGKLSPRYTGPYQITERVGPVAYRLELPV
        GDQVFLKLSPWRGVIRFGRKGKLSPRY GPYQITERVGP AYRLELPV
Subjt:  GDQVFLKLSPWRGVIRFGRKGKLSPRYTGPYQITERVGPVAYRLELPV

A0A5A7U2V7 Reverse transcriptase2.0e-19293.14Show/hide
Query:  MVKQGRLCVLNISELKNAILEEAHSSAYAIHPGSTKMYRTLKKIYWWSGMKQEIAEYVDKCLICQQVKPVRLKPGGFLNPLPVPEWKWEHITMDFLFGLP
        +VKQGRLCV NISELKNAILEEAHSSAYA+HPGSTKMYRTLKK YWWSGMKQEIAEYVD+CLICQQVKPVR +PGGFLNPLPVPEWKWEHITMDFLFGLP
Subjt:  MVKQGRLCVLNISELKNAILEEAHSSAYAIHPGSTKMYRTLKKIYWWSGMKQEIAEYVDKCLICQQVKPVRLKPGGFLNPLPVPEWKWEHITMDFLFGLP

Query:  RTSNGHDGIWVIVDRLTKMARFIPIKATSTLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTRLKFSTSFHPQTDGQYERTIQTLEDM
        RTS+GHDGIWVIVDRLTK  RFIPIK TSTLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGT LKFSTSFHPQTDGQ ERTIQTLEDM
Subjt:  RTSNGHDGIWVIVDRLTKMARFIPIKATSTLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTRLKFSTSFHPQTDGQYERTIQTLEDM

Query:  LRACVFQLKGSWDTHLPLMEFAYNNNYQSSISMAPYEVLYERPCRTPVCWNEVGERKLVGHELVQITTNNIKLIRENLRIAQDRQKSYADKRRRNLEFQV
        LRACV QLKGSWDTHLPLMEFAYNNNYQSSI MAPYE LY RPCRTPVCWNEVGERKLVG ELVQITTNNIKLIRENLR AQDRQKSYADKRRRNLEFQV
Subjt:  LRACVFQLKGSWDTHLPLMEFAYNNNYQSSISMAPYEVLYERPCRTPVCWNEVGERKLVGHELVQITTNNIKLIRENLRIAQDRQKSYADKRRRNLEFQV

Query:  GDQVFLKLSPWRGVIRFGRKGKLSPRYTGPYQITERVGPVAYRLELPVRV
        GDQVFLKLSPWRGVIRFGRKGKLSPRY GPYQITERVGP AYRLELP+ +
Subjt:  GDQVFLKLSPWRGVIRFGRKGKLSPRYTGPYQITERVGPVAYRLELPVRV

A0A5D3BHI1 Reverse transcriptase2.0e-19293.14Show/hide
Query:  MVKQGRLCVLNISELKNAILEEAHSSAYAIHPGSTKMYRTLKKIYWWSGMKQEIAEYVDKCLICQQVKPVRLKPGGFLNPLPVPEWKWEHITMDFLFGLP
        +VKQGRLCV NISELKNAILEEAHSSAYA+HPGSTKMYRTLKK YWWSGMKQEIAEYVD+CLICQQVKPVR +PGGFLNPLPVPEWKWEHITMDFLFGLP
Subjt:  MVKQGRLCVLNISELKNAILEEAHSSAYAIHPGSTKMYRTLKKIYWWSGMKQEIAEYVDKCLICQQVKPVRLKPGGFLNPLPVPEWKWEHITMDFLFGLP

Query:  RTSNGHDGIWVIVDRLTKMARFIPIKATSTLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTRLKFSTSFHPQTDGQYERTIQTLEDM
        RTS+GHDGIWVIVDRLTK  RFIPIK TSTLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGT LKFSTSFHPQTDGQ ERTIQTLEDM
Subjt:  RTSNGHDGIWVIVDRLTKMARFIPIKATSTLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTRLKFSTSFHPQTDGQYERTIQTLEDM

Query:  LRACVFQLKGSWDTHLPLMEFAYNNNYQSSISMAPYEVLYERPCRTPVCWNEVGERKLVGHELVQITTNNIKLIRENLRIAQDRQKSYADKRRRNLEFQV
        LRACV QLKGSWDTHLPLMEFAYNNNYQSSI MAPYE LY RPCRTPVCWNEVGERKLVG ELVQITTNNIKLIRENLR AQDRQKSYADKRRRNLEFQV
Subjt:  LRACVFQLKGSWDTHLPLMEFAYNNNYQSSISMAPYEVLYERPCRTPVCWNEVGERKLVGHELVQITTNNIKLIRENLRIAQDRQKSYADKRRRNLEFQV

Query:  GDQVFLKLSPWRGVIRFGRKGKLSPRYTGPYQITERVGPVAYRLELPVRV
        GDQVFLKLSPWRGVIRFGRKGKLSPRY GPYQITERVGP AYRLELP+ +
Subjt:  GDQVFLKLSPWRGVIRFGRKGKLSPRYTGPYQITERVGPVAYRLELPVRV

A0A5D3BS67 Reverse transcriptase2.0e-19293.14Show/hide
Query:  MVKQGRLCVLNISELKNAILEEAHSSAYAIHPGSTKMYRTLKKIYWWSGMKQEIAEYVDKCLICQQVKPVRLKPGGFLNPLPVPEWKWEHITMDFLFGLP
        +VKQGRLCV NISELKNAILEEAHSSAYA+HPGSTKMYRTLKK YWWSGMKQEIAEYVD+CLICQQVKPVR +PGGFLNPLPVPEWKWEHITMDFLFGLP
Subjt:  MVKQGRLCVLNISELKNAILEEAHSSAYAIHPGSTKMYRTLKKIYWWSGMKQEIAEYVDKCLICQQVKPVRLKPGGFLNPLPVPEWKWEHITMDFLFGLP

Query:  RTSNGHDGIWVIVDRLTKMARFIPIKATSTLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTRLKFSTSFHPQTDGQYERTIQTLEDM
        RTS+GHDGIWVIVDRLTK  RFIPIK TSTLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGT LKFSTSFHPQTDGQ ERTIQTLEDM
Subjt:  RTSNGHDGIWVIVDRLTKMARFIPIKATSTLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTRLKFSTSFHPQTDGQYERTIQTLEDM

Query:  LRACVFQLKGSWDTHLPLMEFAYNNNYQSSISMAPYEVLYERPCRTPVCWNEVGERKLVGHELVQITTNNIKLIRENLRIAQDRQKSYADKRRRNLEFQV
        LRACV QLKGSWDTHLPLMEFAYNNNYQSSI MAPYE LY RPCRTPVCWNEVGERKLVG ELVQITTNNIKLIRENLR AQDRQKSYADKRRRNLEFQV
Subjt:  LRACVFQLKGSWDTHLPLMEFAYNNNYQSSISMAPYEVLYERPCRTPVCWNEVGERKLVGHELVQITTNNIKLIRENLRIAQDRQKSYADKRRRNLEFQV

Query:  GDQVFLKLSPWRGVIRFGRKGKLSPRYTGPYQITERVGPVAYRLELPVRV
        GDQVFLKLSPWRGVIRFGRKGKLSPRY GPYQITERVGP AYRLELP+ +
Subjt:  GDQVFLKLSPWRGVIRFGRKGKLSPRYTGPYQITERVGPVAYRLELPVRV

SwissProt top hitse value%identityAlignment
P0CT34 Transposon Tf2-1 polyprotein1.0e-5232.74Show/hide
Query:  NISELKNAILEEAHSSAYAIHPGSTKMYRTLKKIYWWSGMKQEIAEYVDKCLICQQVKPVRLKPGGFLNPLPVPEWKWEHITMDFLFGLPRTSNGHDGIW
        N ++L   I+++ H     IHPG   +   + + + W G++++I EYV  C  CQ  K    KP G L P+P  E  WE ++MDF+  LP  S+G++ ++
Subjt:  NISELKNAILEEAHSSAYAIHPGSTKMYRTLKKIYWWSGMKQEIAEYVDKCLICQQVKPVRLKPGGFLNPLPVPEWKWEHITMDFLFGLPRTSNGHDGIW

Query:  VIVDRLTKMARFIPIKATSTLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTRLKFSTSFHPQTDGQYERTIQTLEDMLRACVFQLKG
        V+VDR +KMA  +P   + T +Q AR++  ++++ +G P  I++D D  FTS+ W          +KFS  + PQTDGQ ERT QT+E +LR        
Subjt:  VIVDRLTKMARFIPIKATSTLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTRLKFSTSFHPQTDGQYERTIQTLEDMLRACVFQLKG

Query:  SWDTHLPLMEFAYNNNYQSSISMAPYEVLYE-RPCRTPVCWNEVGERKLVGHELVQITTNNIKLIRENLRIAQDRQKSYADKRRRNL-EFQVGDQVFLKL
        +W  H+ L++ +YNN   S+  M P+E+++   P  +P+      ++     E  Q T    + ++E+L     + K Y D + + + EFQ GD V +K 
Subjt:  SWDTHLPLMEFAYNNNYQSSISMAPYEVLYE-RPCRTPVCWNEVGERKLVGHELVQITTNNIKLIRENLRIAQDRQKSYADKRRRNL-EFQVGDQVFLKL

Query:  SPWRGVIRFGRKGKLSPRYTGPYQITERVGPVAYRLELP
        +   G +   +  KL+P + GP+ + ++ GP  Y L+LP
Subjt:  SPWRGVIRFGRKGKLSPRYTGPYQITERVGPVAYRLELP

P0CT35 Transposon Tf2-2 polyprotein1.0e-5232.74Show/hide
Query:  NISELKNAILEEAHSSAYAIHPGSTKMYRTLKKIYWWSGMKQEIAEYVDKCLICQQVKPVRLKPGGFLNPLPVPEWKWEHITMDFLFGLPRTSNGHDGIW
        N ++L   I+++ H     IHPG   +   + + + W G++++I EYV  C  CQ  K    KP G L P+P  E  WE ++MDF+  LP  S+G++ ++
Subjt:  NISELKNAILEEAHSSAYAIHPGSTKMYRTLKKIYWWSGMKQEIAEYVDKCLICQQVKPVRLKPGGFLNPLPVPEWKWEHITMDFLFGLPRTSNGHDGIW

Query:  VIVDRLTKMARFIPIKATSTLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTRLKFSTSFHPQTDGQYERTIQTLEDMLRACVFQLKG
        V+VDR +KMA  +P   + T +Q AR++  ++++ +G P  I++D D  FTS+ W          +KFS  + PQTDGQ ERT QT+E +LR        
Subjt:  VIVDRLTKMARFIPIKATSTLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTRLKFSTSFHPQTDGQYERTIQTLEDMLRACVFQLKG

Query:  SWDTHLPLMEFAYNNNYQSSISMAPYEVLYE-RPCRTPVCWNEVGERKLVGHELVQITTNNIKLIRENLRIAQDRQKSYADKRRRNL-EFQVGDQVFLKL
        +W  H+ L++ +YNN   S+  M P+E+++   P  +P+      ++     E  Q T    + ++E+L     + K Y D + + + EFQ GD V +K 
Subjt:  SWDTHLPLMEFAYNNNYQSSISMAPYEVLYE-RPCRTPVCWNEVGERKLVGHELVQITTNNIKLIRENLRIAQDRQKSYADKRRRNL-EFQVGDQVFLKL

Query:  SPWRGVIRFGRKGKLSPRYTGPYQITERVGPVAYRLELP
        +   G +   +  KL+P + GP+ + ++ GP  Y L+LP
Subjt:  SPWRGVIRFGRKGKLSPRYTGPYQITERVGPVAYRLELP

P0CT36 Transposon Tf2-3 polyprotein1.0e-5232.74Show/hide
Query:  NISELKNAILEEAHSSAYAIHPGSTKMYRTLKKIYWWSGMKQEIAEYVDKCLICQQVKPVRLKPGGFLNPLPVPEWKWEHITMDFLFGLPRTSNGHDGIW
        N ++L   I+++ H     IHPG   +   + + + W G++++I EYV  C  CQ  K    KP G L P+P  E  WE ++MDF+  LP  S+G++ ++
Subjt:  NISELKNAILEEAHSSAYAIHPGSTKMYRTLKKIYWWSGMKQEIAEYVDKCLICQQVKPVRLKPGGFLNPLPVPEWKWEHITMDFLFGLPRTSNGHDGIW

Query:  VIVDRLTKMARFIPIKATSTLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTRLKFSTSFHPQTDGQYERTIQTLEDMLRACVFQLKG
        V+VDR +KMA  +P   + T +Q AR++  ++++ +G P  I++D D  FTS+ W          +KFS  + PQTDGQ ERT QT+E +LR        
Subjt:  VIVDRLTKMARFIPIKATSTLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTRLKFSTSFHPQTDGQYERTIQTLEDMLRACVFQLKG

Query:  SWDTHLPLMEFAYNNNYQSSISMAPYEVLYE-RPCRTPVCWNEVGERKLVGHELVQITTNNIKLIRENLRIAQDRQKSYADKRRRNL-EFQVGDQVFLKL
        +W  H+ L++ +YNN   S+  M P+E+++   P  +P+      ++     E  Q T    + ++E+L     + K Y D + + + EFQ GD V +K 
Subjt:  SWDTHLPLMEFAYNNNYQSSISMAPYEVLYE-RPCRTPVCWNEVGERKLVGHELVQITTNNIKLIRENLRIAQDRQKSYADKRRRNL-EFQVGDQVFLKL

Query:  SPWRGVIRFGRKGKLSPRYTGPYQITERVGPVAYRLELP
        +   G +   +  KL+P + GP+ + ++ GP  Y L+LP
Subjt:  SPWRGVIRFGRKGKLSPRYTGPYQITERVGPVAYRLELP

P0CT41 Transposon Tf2-12 polyprotein1.0e-5232.74Show/hide
Query:  NISELKNAILEEAHSSAYAIHPGSTKMYRTLKKIYWWSGMKQEIAEYVDKCLICQQVKPVRLKPGGFLNPLPVPEWKWEHITMDFLFGLPRTSNGHDGIW
        N ++L   I+++ H     IHPG   +   + + + W G++++I EYV  C  CQ  K    KP G L P+P  E  WE ++MDF+  LP  S+G++ ++
Subjt:  NISELKNAILEEAHSSAYAIHPGSTKMYRTLKKIYWWSGMKQEIAEYVDKCLICQQVKPVRLKPGGFLNPLPVPEWKWEHITMDFLFGLPRTSNGHDGIW

Query:  VIVDRLTKMARFIPIKATSTLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTRLKFSTSFHPQTDGQYERTIQTLEDMLRACVFQLKG
        V+VDR +KMA  +P   + T +Q AR++  ++++ +G P  I++D D  FTS+ W          +KFS  + PQTDGQ ERT QT+E +LR        
Subjt:  VIVDRLTKMARFIPIKATSTLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTRLKFSTSFHPQTDGQYERTIQTLEDMLRACVFQLKG

Query:  SWDTHLPLMEFAYNNNYQSSISMAPYEVLYE-RPCRTPVCWNEVGERKLVGHELVQITTNNIKLIRENLRIAQDRQKSYADKRRRNL-EFQVGDQVFLKL
        +W  H+ L++ +YNN   S+  M P+E+++   P  +P+      ++     E  Q T    + ++E+L     + K Y D + + + EFQ GD V +K 
Subjt:  SWDTHLPLMEFAYNNNYQSSISMAPYEVLYE-RPCRTPVCWNEVGERKLVGHELVQITTNNIKLIRENLRIAQDRQKSYADKRRRNL-EFQVGDQVFLKL

Query:  SPWRGVIRFGRKGKLSPRYTGPYQITERVGPVAYRLELP
        +   G +   +  KL+P + GP+ + ++ GP  Y L+LP
Subjt:  SPWRGVIRFGRKGKLSPRYTGPYQITERVGPVAYRLELP

Q9UR07 Transposon Tf2-11 polyprotein1.0e-5232.74Show/hide
Query:  NISELKNAILEEAHSSAYAIHPGSTKMYRTLKKIYWWSGMKQEIAEYVDKCLICQQVKPVRLKPGGFLNPLPVPEWKWEHITMDFLFGLPRTSNGHDGIW
        N ++L   I+++ H     IHPG   +   + + + W G++++I EYV  C  CQ  K    KP G L P+P  E  WE ++MDF+  LP  S+G++ ++
Subjt:  NISELKNAILEEAHSSAYAIHPGSTKMYRTLKKIYWWSGMKQEIAEYVDKCLICQQVKPVRLKPGGFLNPLPVPEWKWEHITMDFLFGLPRTSNGHDGIW

Query:  VIVDRLTKMARFIPIKATSTLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTRLKFSTSFHPQTDGQYERTIQTLEDMLRACVFQLKG
        V+VDR +KMA  +P   + T +Q AR++  ++++ +G P  I++D D  FTS+ W          +KFS  + PQTDGQ ERT QT+E +LR        
Subjt:  VIVDRLTKMARFIPIKATSTLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTRLKFSTSFHPQTDGQYERTIQTLEDMLRACVFQLKG

Query:  SWDTHLPLMEFAYNNNYQSSISMAPYEVLYE-RPCRTPVCWNEVGERKLVGHELVQITTNNIKLIRENLRIAQDRQKSYADKRRRNL-EFQVGDQVFLKL
        +W  H+ L++ +YNN   S+  M P+E+++   P  +P+      ++     E  Q T    + ++E+L     + K Y D + + + EFQ GD V +K 
Subjt:  SWDTHLPLMEFAYNNNYQSSISMAPYEVLYE-RPCRTPVCWNEVGERKLVGHELVQITTNNIKLIRENLRIAQDRQKSYADKRRRNL-EFQVGDQVFLKL

Query:  SPWRGVIRFGRKGKLSPRYTGPYQITERVGPVAYRLELP
        +   G +   +  KL+P + GP+ + ++ GP  Y L+LP
Subjt:  SPWRGVIRFGRKGKLSPRYTGPYQITERVGPVAYRLELP

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTAAACAGGGAAGATTATGTGTTCTGAATATCAGTGAGCTTAAGAATGCTATTCTAGAAGAAGCTCACAGTTCAGCTTATGCTATACATCCAGGTAGCACC
AAGATGTACAGAACTTTAAAGAAGATTTATTGGTGGTCTGGAATGAAGCAAGAGATAGCTGAATATGTTGATAAATGTTTGATTTGTCAACAGGTTAAACCAGTA
AGACTGAAGCCAGGAGGATTTCTTAATCCTTTGCCAGTGCCAGAGTGGAAATGGGAGCATATTACTATGGATTTTCTATTTGGATTACCTCGTACATCCAATGGA
CATGATGGTATATGGGTAATAGTAGACAGACTCACCAAGATGGCACGATTTATACCGATTAAAGCGACATCTACGTTAGACCAGCTAGCTAGATTATATGTTGAT
AAGATTGTGAGTCAGTATGGAGTACCAGTGTCCATAGTTTCAGATAGGGATCCGAGGTTTACTTCTAAATTTTGGCCTAGTTTACAGAAAGCAATGGGAACAAGG
CTAAAGTTTAGTACATCATTTCATCCCCAAACAGATGGTCAGTATGAGAGGACCATCCAAACTTTAGAGGACATGTTGAGAGCATGTGTCTTTCAACTTAAAGGA
AGTTGGGATACCCACTTGCCACTTATGGAGTTTGCTTATAATAATAACTATCAGTCTAGTATCAGTATGGCACCATATGAAGTCTTATACGAGAGACCATGCAGA
ACTCCTGTGTGCTGGAATGAAGTAGGAGAGCGAAAGTTAGTAGGTCATGAGTTGGTTCAGATTACGACAAACAATATTAAGTTGATTAGAGAAAATCTGAGGATA
GCCCAAGATCGACAGAAAAGTTATGCGGATAAGCGACGAAGAAACCTAGAATTCCAAGTTGGAGATCAAGTTTTCTTGAAATTATCTCCATGGCGAGGTGTTATT
CGTTTCGGAAGAAAAGGTAAATTAAGTCCTAGATATACTGGGCCATATCAGATAACGGAACGAGTGGGACCAGTAGCGTATAGACTTGAGTTGCCAGTACGTGTT
TTGAGTTGCGCATAG
mRNA sequenceShow/hide mRNA sequence
ATGGTTAAACAGGGAAGATTATGTGTTCTGAATATCAGTGAGCTTAAGAATGCTATTCTAGAAGAAGCTCACAGTTCAGCTTATGCTATACATCCAGGTAGCACC
AAGATGTACAGAACTTTAAAGAAGATTTATTGGTGGTCTGGAATGAAGCAAGAGATAGCTGAATATGTTGATAAATGTTTGATTTGTCAACAGGTTAAACCAGTA
AGACTGAAGCCAGGAGGATTTCTTAATCCTTTGCCAGTGCCAGAGTGGAAATGGGAGCATATTACTATGGATTTTCTATTTGGATTACCTCGTACATCCAATGGA
CATGATGGTATATGGGTAATAGTAGACAGACTCACCAAGATGGCACGATTTATACCGATTAAAGCGACATCTACGTTAGACCAGCTAGCTAGATTATATGTTGAT
AAGATTGTGAGTCAGTATGGAGTACCAGTGTCCATAGTTTCAGATAGGGATCCGAGGTTTACTTCTAAATTTTGGCCTAGTTTACAGAAAGCAATGGGAACAAGG
CTAAAGTTTAGTACATCATTTCATCCCCAAACAGATGGTCAGTATGAGAGGACCATCCAAACTTTAGAGGACATGTTGAGAGCATGTGTCTTTCAACTTAAAGGA
AGTTGGGATACCCACTTGCCACTTATGGAGTTTGCTTATAATAATAACTATCAGTCTAGTATCAGTATGGCACCATATGAAGTCTTATACGAGAGACCATGCAGA
ACTCCTGTGTGCTGGAATGAAGTAGGAGAGCGAAAGTTAGTAGGTCATGAGTTGGTTCAGATTACGACAAACAATATTAAGTTGATTAGAGAAAATCTGAGGATA
GCCCAAGATCGACAGAAAAGTTATGCGGATAAGCGACGAAGAAACCTAGAATTCCAAGTTGGAGATCAAGTTTTCTTGAAATTATCTCCATGGCGAGGTGTTATT
CGTTTCGGAAGAAAAGGTAAATTAAGTCCTAGATATACTGGGCCATATCAGATAACGGAACGAGTGGGACCAGTAGCGTATAGACTTGAGTTGCCAGTACGTGTT
TTGAGTTGCGCATAG
Protein sequenceShow/hide protein sequence
MVKQGRLCVLNISELKNAILEEAHSSAYAIHPGSTKMYRTLKKIYWWSGMKQEIAEYVDKCLICQQVKPVRLKPGGFLNPLPVPEWKWEHITMDFLFGLPRTSNG
HDGIWVIVDRLTKMARFIPIKATSTLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTRLKFSTSFHPQTDGQYERTIQTLEDMLRACVFQLKG
SWDTHLPLMEFAYNNNYQSSISMAPYEVLYERPCRTPVCWNEVGERKLVGHELVQITTNNIKLIRENLRIAQDRQKSYADKRRRNLEFQVGDQVFLKLSPWRGVI
RFGRKGKLSPRYTGPYQITERVGPVAYRLELPVRVLSCA