; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc09g0247401 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc09g0247401
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionTy3/gypsy retrotransposon protein
Genome locationCMiso1.1chr09:12071969..12072922
RNA-Seq ExpressionCmc09g0247401
SyntenyCmc09g0247401
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0098869 - cellular oxidant detoxification (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004601 - peroxidase activity (molecular function)
GO:0016779 - nucleotidyltransferase activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
GO:0051536 - iron-sulfur cluster binding (molecular function)
InterPro domainsIPR000477 - Reverse transcriptase domain
IPR043128 - Reverse transcriptase/Diguanylate cyclase domain
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0062448.1 disease resistance protein [Cucumis melo var. makuwa]8.7e-14181.76Show/hide
Query:  MGIHWSSMTMVFMARMTQVVLEGDPSLTKAECSLTTISETWEEEDQGFLLEFQNVEMNIDTEEESEKEEEGEESKLRMINNLLKRYRSIFEMPKRLPQKR
        M IHW SMTMVFM   +QV+L+GDPSLTKAECSL TIS+TWEEEDQGFL+EFQ +E+   +E ESEKEEEGEES L MI NLL + R IFE+PK LP KR
Subjt:  MGIHWSSMTMVFMARMTQVVLEGDPSLTKAECSLTTISETWEEEDQGFLLEFQNVEMNIDTEEESEKEEEGEESKLRMINNLLKRYRSIFEMPKRLPQKR

Query:  VVDHRILIVDGQKPINVHPYKYGYIQKEEIEKLVSEMIQAGIIRSSRRPYSSPVLLVKKRDGGWRFCVDYCKLNQVTIVDTFPIPVIEELLDELHGAKVF
         VDHRILI +GQ PINV PYKYGYIQK EIE+LVSEM+QA IIR SR PYSSPVLLVKK+DGGWRFCVDY KLNQVTI D FPIPVIEELLDELHGA+VF
Subjt:  VVDHRILIVDGQKPINVHPYKYGYIQKEEIEKLVSEMIQAGIIRSSRRPYSSPVLLVKKRDGGWRFCVDYCKLNQVTIVDTFPIPVIEELLDELHGAKVF

Query:  SKLDLRSGYLQIRMK-EDSEKTDFRTHEGHYEFFVMSFGLTNASTTFQSLMNQIFRPFLRRFVLVFFFDDILIYSKDITEHERHLGVVFNVMKDNQLSAN
        SKLDLRSGY QIRMK ED EKT FRTHEGHYEF VM FGLTNA  TFQSLMNQIFRPFLRRFVLV FFDDILIYSK+ITEHE+HLGVVFNVMKDNQL AN
Subjt:  SKLDLRSGYLQIRMK-EDSEKTDFRTHEGHYEFFVMSFGLTNASTTFQSLMNQIFRPFLRRFVLVFFFDDILIYSKDITEHERHLGVVFNVMKDNQLSAN

Query:  EKKCMIGHSRVNYLGHWI
        EKKCMIGHSR+NYLGHWI
Subjt:  EKKCMIGHSRVNYLGHWI

KAE8637561.1 hypothetical protein CSA_017659 [Cucumis sativus]2.2e-12069.5Show/hide
Query:  MGIHWSSMTMVFMARMTQVVLEGDPSLTKAECSLTTISETWEEEDQGFLLEFQNVEMNIDTEEESEKEEEGEESKLRMINNLLKRYRSIFEMPKRLPQKR
        M IHW S+TM F +   +++L+GDPSL +AEC L TI +TWE EDQGFLLEFQ  E  IDT+ E ++  +G+E ++ MI NLL++Y +IFE PK+LP KR
Subjt:  MGIHWSSMTMVFMARMTQVVLEGDPSLTKAECSLTTISETWEEEDQGFLLEFQNVEMNIDTEEESEKEEEGEESKLRMINNLLKRYRSIFEMPKRLPQKR

Query:  VVDHRILIVDGQKPINVHPYKYGYIQKEEIEKLVSEMIQAGIIRSSRRPYSSPVLLVKKRDGGWRFCVDYCKLNQVTIVDTFPIPVIEELLDELHGAKVF
         +DHRIL++  Q+PINV PYKYGY+QKEEIEKLV EM+QAG+IR S  PYSSPVLLVKK+DGGWRFCVDY KLNQVTI D FPIPVIEELLDELHGA VF
Subjt:  VVDHRILIVDGQKPINVHPYKYGYIQKEEIEKLVSEMIQAGIIRSSRRPYSSPVLLVKKRDGGWRFCVDYCKLNQVTIVDTFPIPVIEELLDELHGAKVF

Query:  SKLDLRSGYLQIRM-KEDSEKTDFRTHEGHYEFFVMSFGLTNASTTFQSLMNQIFRPFLRRFVLVFFFDDILIYSKDITEHERHLGVVFNVMKDNQLSAN
        SKLD++S Y QIRM +ED EKT FRTHEGHYEF VM FGLTNA  TFQSLMNQ+F+PFLRR VLV FFDDIL+YSKDI+EHE+HLG+VF V++DN L AN
Subjt:  SKLDLRSGYLQIRM-KEDSEKTDFRTHEGHYEFFVMSFGLTNASTTFQSLMNQIFRPFLRRFVLVFFFDDILIYSKDITEHERHLGVVFNVMKDNQLSAN

Query:  EKKCMIGHSRVNYLGHWI
        +KKC+I HS++ YLGH I
Subjt:  EKKCMIGHSRVNYLGHWI

TYJ98046.1 peroxidase 64 [Cucumis melo var. makuwa]1.3e-13980.82Show/hide
Query:  MGIHWSSMTMVFMARMTQVVLEGDPSLTKAECSLTTISETWEEEDQGFLLEFQNVEMNIDTEEESEKEEEGEESKLRMINNLLKRYRSIFEMPKRLPQKR
        M IHW SMTMVFM   +QV+L+GDPSL KAECSL TIS+TWEEEDQGFL+EFQ +E+   +E ESEKEEEGEES L MI NLL + R IFE+PK LP KR
Subjt:  MGIHWSSMTMVFMARMTQVVLEGDPSLTKAECSLTTISETWEEEDQGFLLEFQNVEMNIDTEEESEKEEEGEESKLRMINNLLKRYRSIFEMPKRLPQKR

Query:  VVDHRILIVDGQKPINVHPYKYGYIQKEEIEKLVSEMIQAGIIRSSRRPYSSPVLLVKKRDGGWRFCVDYCKLNQVTIVDTFPIPVIEELLDELHGAKVF
         VDHRILI +GQ PINV PYKYGYIQK EIE+LVSEM+QA IIR SR PYSSPVLLVKKRDGGWRFCVDY KLNQVT+ D FPIPVIEELLDELHGA+VF
Subjt:  VVDHRILIVDGQKPINVHPYKYGYIQKEEIEKLVSEMIQAGIIRSSRRPYSSPVLLVKKRDGGWRFCVDYCKLNQVTIVDTFPIPVIEELLDELHGAKVF

Query:  SKLDLRSGYLQIRMK-EDSEKTDFRTHEGHYEFFVMSFGLTNASTTFQSLMNQIFRPFLRRFVLVFFFDDILIYSKDITEHERHLGVVFNVMKDNQLSAN
        SKLDLRSGY QIRMK ED EKT FRTHEGHYEF VM FGLTN   TFQSLMNQIFRPFLRRFVLV FFDDILIYSK+ITEHE+HLGVVFNVMKDNQL AN
Subjt:  SKLDLRSGYLQIRMK-EDSEKTDFRTHEGHYEFFVMSFGLTNASTTFQSLMNQIFRPFLRRFVLVFFFDDILIYSKDITEHERHLGVVFNVMKDNQLSAN

Query:  EKKCMIGHSRVNYLGHWI
        EKKC+IGHSR+NYLGHWI
Subjt:  EKKCMIGHSRVNYLGHWI

TYK27437.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]8.7e-14181.76Show/hide
Query:  MGIHWSSMTMVFMARMTQVVLEGDPSLTKAECSLTTISETWEEEDQGFLLEFQNVEMNIDTEEESEKEEEGEESKLRMINNLLKRYRSIFEMPKRLPQKR
        M IHW SMTMVFM   +QV+L+GDPSLTKAECSL TIS+TWEEEDQGFL+EFQ +E+   +E ESEKEEEGEES L MI NLL + R IFE+PK LP KR
Subjt:  MGIHWSSMTMVFMARMTQVVLEGDPSLTKAECSLTTISETWEEEDQGFLLEFQNVEMNIDTEEESEKEEEGEESKLRMINNLLKRYRSIFEMPKRLPQKR

Query:  VVDHRILIVDGQKPINVHPYKYGYIQKEEIEKLVSEMIQAGIIRSSRRPYSSPVLLVKKRDGGWRFCVDYCKLNQVTIVDTFPIPVIEELLDELHGAKVF
         VDHRILI +GQ PINV PYKYGYIQK EIE+LVSEM+QA IIR SR PYSSPVLLVKK+DGGWRFCVDY KLNQVTI D FPIPVIEELLDELHGA+VF
Subjt:  VVDHRILIVDGQKPINVHPYKYGYIQKEEIEKLVSEMIQAGIIRSSRRPYSSPVLLVKKRDGGWRFCVDYCKLNQVTIVDTFPIPVIEELLDELHGAKVF

Query:  SKLDLRSGYLQIRMK-EDSEKTDFRTHEGHYEFFVMSFGLTNASTTFQSLMNQIFRPFLRRFVLVFFFDDILIYSKDITEHERHLGVVFNVMKDNQLSAN
        SKLDLRSGY QIRMK ED EKT FRTHEGHYEF VM FGLTNA  TFQSLMNQIFRPFLRRFVLV FFDDILIYSK+ITEHE+HLGVVFNVMKDNQL AN
Subjt:  SKLDLRSGYLQIRMK-EDSEKTDFRTHEGHYEFFVMSFGLTNASTTFQSLMNQIFRPFLRRFVLVFFFDDILIYSKDITEHERHLGVVFNVMKDNQLSAN

Query:  EKKCMIGHSRVNYLGHWI
        EKKCMIGHSR+NYLGHWI
Subjt:  EKKCMIGHSRVNYLGHWI

XP_031745528.1 uncharacterized protein LOC116405915 [Cucumis sativus]1.2e-11869.81Show/hide
Query:  MGIHWSSMTMVFMARMTQVVLEGDPSLTKAECSLTTISETWEEEDQGFLLEFQNVEMNIDTEEESEKEEEGEESKLRMINNLLKRYRSIFEMPKRLPQKR
        M IHW S+TM F     Q +L+GDPSL +AECSL TI +TWEE+DQGFLLE QN E   D E +  +  +G+E +  MI  LL++Y  +FE PK LP KR
Subjt:  MGIHWSSMTMVFMARMTQVVLEGDPSLTKAECSLTTISETWEEEDQGFLLEFQNVEMNIDTEEESEKEEEGEESKLRMINNLLKRYRSIFEMPKRLPQKR

Query:  VVDHRILIVDGQKPINVHPYKYGYIQKEEIEKLVSEMIQAGIIRSSRRPYSSPVLLVKKRDGGWRFCVDYCKLNQVTIVDTFPIPVIEELLDELHGAKVF
          DHRIL+V GQKPINV PYKYG+ QKEEIEKL+SEM+Q GIIR S  PYSSPVLLV+K+DGGWRFCVDY KLNQVTI D FPIPVIEELLDELHGA VF
Subjt:  VVDHRILIVDGQKPINVHPYKYGYIQKEEIEKLVSEMIQAGIIRSSRRPYSSPVLLVKKRDGGWRFCVDYCKLNQVTIVDTFPIPVIEELLDELHGAKVF

Query:  SKLDLRSGYLQIRMK-EDSEKTDFRTHEGHYEFFVMSFGLTNASTTFQSLMNQIFRPFLRRFVLVFFFDDILIYSKDITEHERHLGVVFNVMKDNQLSAN
        SKLDL+SGY QIRMK ED EKT FRTHEGHYEF VM FGLTNA  TFQSLMN +F+PFLRR VLV FFDDILIYS ++TEHE+HL +VF VM+DNQL AN
Subjt:  SKLDLRSGYLQIRMK-EDSEKTDFRTHEGHYEFFVMSFGLTNASTTFQSLMNQIFRPFLRRFVLVFFFDDILIYSKDITEHERHLGVVFNVMKDNQLSAN

Query:  EKKCMIGHSRVNYLGHWI
        +KKC+I HS++ YLGH I
Subjt:  EKKCMIGHSRVNYLGHWI

TrEMBL top hitse value%identityAlignment
A0A5A7UM77 Ty3/gypsy retrotransposon protein2.9e-11868.24Show/hide
Query:  MGIHWSSMTMVFMARMTQVVLEGDPSLTKAECSLTTISETWEEEDQGFLLEFQNVEMNIDTEEESEKEEEGEESKLRMINNLLKRYRSIFEMPKRLPQKR
        M IHW S+TM F     Q+VL+GDPSL +AECSL T+ +TW+EEDQGFLLE+ N+++  D   +++++EEG+E+ + MI  LL++Y  IF  PK LP KR
Subjt:  MGIHWSSMTMVFMARMTQVVLEGDPSLTKAECSLTTISETWEEEDQGFLLEFQNVEMNIDTEEESEKEEEGEESKLRMINNLLKRYRSIFEMPKRLPQKR

Query:  VVDHRILIVDGQKPINVHPYKYGYIQKEEIEKLVSEMIQAGIIRSSRRPYSSPVLLVKKRDGGWRFCVDYCKLNQVTIVDTFPIPVIEELLDELHGAKVF
         +DHRIL +  QKPINV PYKYG+IQK EIEKLV+EM+Q G+IR SR PYSSPVLLVKK++GGWRFCVDY KLNQ TI D FPIPVIEELLDEL+GA VF
Subjt:  VVDHRILIVDGQKPINVHPYKYGYIQKEEIEKLVSEMIQAGIIRSSRRPYSSPVLLVKKRDGGWRFCVDYCKLNQVTIVDTFPIPVIEELLDELHGAKVF

Query:  SKLDLRSGYLQIRMK-EDSEKTDFRTHEGHYEFFVMSFGLTNASTTFQSLMNQIFRPFLRRFVLVFFFDDILIYSKDITEHERHLGVVFNVMKDNQLSAN
        SKLDL+SGY QIRMK ED EKT FRTHEGHYEF VM FGLTNA  TFQSLMNQ+F+PFLRR VLVFF+ DIL+YS+DITEHE+HLG+VF V++DNQL AN
Subjt:  SKLDLRSGYLQIRMK-EDSEKTDFRTHEGHYEFFVMSFGLTNASTTFQSLMNQIFRPFLRRFVLVFFFDDILIYSKDITEHERHLGVVFNVMKDNQLSAN

Query:  EKKCMIGHSRVNYLGHWI
         KKC+  HS++ YLGH I
Subjt:  EKKCMIGHSRVNYLGHWI

A0A5A7V4D8 Disease resistance protein4.2e-14181.76Show/hide
Query:  MGIHWSSMTMVFMARMTQVVLEGDPSLTKAECSLTTISETWEEEDQGFLLEFQNVEMNIDTEEESEKEEEGEESKLRMINNLLKRYRSIFEMPKRLPQKR
        M IHW SMTMVFM   +QV+L+GDPSLTKAECSL TIS+TWEEEDQGFL+EFQ +E+   +E ESEKEEEGEES L MI NLL + R IFE+PK LP KR
Subjt:  MGIHWSSMTMVFMARMTQVVLEGDPSLTKAECSLTTISETWEEEDQGFLLEFQNVEMNIDTEEESEKEEEGEESKLRMINNLLKRYRSIFEMPKRLPQKR

Query:  VVDHRILIVDGQKPINVHPYKYGYIQKEEIEKLVSEMIQAGIIRSSRRPYSSPVLLVKKRDGGWRFCVDYCKLNQVTIVDTFPIPVIEELLDELHGAKVF
         VDHRILI +GQ PINV PYKYGYIQK EIE+LVSEM+QA IIR SR PYSSPVLLVKK+DGGWRFCVDY KLNQVTI D FPIPVIEELLDELHGA+VF
Subjt:  VVDHRILIVDGQKPINVHPYKYGYIQKEEIEKLVSEMIQAGIIRSSRRPYSSPVLLVKKRDGGWRFCVDYCKLNQVTIVDTFPIPVIEELLDELHGAKVF

Query:  SKLDLRSGYLQIRMK-EDSEKTDFRTHEGHYEFFVMSFGLTNASTTFQSLMNQIFRPFLRRFVLVFFFDDILIYSKDITEHERHLGVVFNVMKDNQLSAN
        SKLDLRSGY QIRMK ED EKT FRTHEGHYEF VM FGLTNA  TFQSLMNQIFRPFLRRFVLV FFDDILIYSK+ITEHE+HLGVVFNVMKDNQL AN
Subjt:  SKLDLRSGYLQIRMK-EDSEKTDFRTHEGHYEFFVMSFGLTNASTTFQSLMNQIFRPFLRRFVLVFFFDDILIYSKDITEHERHLGVVFNVMKDNQLSAN

Query:  EKKCMIGHSRVNYLGHWI
        EKKCMIGHSR+NYLGHWI
Subjt:  EKKCMIGHSRVNYLGHWI

A0A5D3BG24 Peroxidase 646.1e-14080.82Show/hide
Query:  MGIHWSSMTMVFMARMTQVVLEGDPSLTKAECSLTTISETWEEEDQGFLLEFQNVEMNIDTEEESEKEEEGEESKLRMINNLLKRYRSIFEMPKRLPQKR
        M IHW SMTMVFM   +QV+L+GDPSL KAECSL TIS+TWEEEDQGFL+EFQ +E+   +E ESEKEEEGEES L MI NLL + R IFE+PK LP KR
Subjt:  MGIHWSSMTMVFMARMTQVVLEGDPSLTKAECSLTTISETWEEEDQGFLLEFQNVEMNIDTEEESEKEEEGEESKLRMINNLLKRYRSIFEMPKRLPQKR

Query:  VVDHRILIVDGQKPINVHPYKYGYIQKEEIEKLVSEMIQAGIIRSSRRPYSSPVLLVKKRDGGWRFCVDYCKLNQVTIVDTFPIPVIEELLDELHGAKVF
         VDHRILI +GQ PINV PYKYGYIQK EIE+LVSEM+QA IIR SR PYSSPVLLVKKRDGGWRFCVDY KLNQVT+ D FPIPVIEELLDELHGA+VF
Subjt:  VVDHRILIVDGQKPINVHPYKYGYIQKEEIEKLVSEMIQAGIIRSSRRPYSSPVLLVKKRDGGWRFCVDYCKLNQVTIVDTFPIPVIEELLDELHGAKVF

Query:  SKLDLRSGYLQIRMK-EDSEKTDFRTHEGHYEFFVMSFGLTNASTTFQSLMNQIFRPFLRRFVLVFFFDDILIYSKDITEHERHLGVVFNVMKDNQLSAN
        SKLDLRSGY QIRMK ED EKT FRTHEGHYEF VM FGLTN   TFQSLMNQIFRPFLRRFVLV FFDDILIYSK+ITEHE+HLGVVFNVMKDNQL AN
Subjt:  SKLDLRSGYLQIRMK-EDSEKTDFRTHEGHYEFFVMSFGLTNASTTFQSLMNQIFRPFLRRFVLVFFFDDILIYSKDITEHERHLGVVFNVMKDNQLSAN

Query:  EKKCMIGHSRVNYLGHWI
        EKKC+IGHSR+NYLGHWI
Subjt:  EKKCMIGHSRVNYLGHWI

A0A5D3CW02 Uncharacterized protein1.0e-11867.3Show/hide
Query:  MGIHWSSMTMVFMARMTQVVLEGDPSLTKAECSLTTISETWEEEDQGFLLEFQNVEMNIDTEEESEKEEEGEESKLRMINNLLKRYRSIFEMPKRLPQKR
        M IHW S+TM+F     Q+VL+GDPSL KAECSL T+ +TW+++DQGFLLE+ N+EM+ + + E++KE +G+E+ + MI  LL++Y  IF  PK LP KR
Subjt:  MGIHWSSMTMVFMARMTQVVLEGDPSLTKAECSLTTISETWEEEDQGFLLEFQNVEMNIDTEEESEKEEEGEESKLRMINNLLKRYRSIFEMPKRLPQKR

Query:  VVDHRILIVDGQKPINVHPYKYGYIQKEEIEKLVSEMIQAGIIRSSRRPYSSPVLLVKKRDGGWRFCVDYCKLNQVTIVDTFPIPVIEELLDELHGAKVF
         +DHRIL +  Q+PINV PYKYG++QKEEIE LV+EM+Q GIIR S  PYSSPVLLVK++DGGWRFCVDY KLNQ T+ D FPIPVIEELLDELHGA VF
Subjt:  VVDHRILIVDGQKPINVHPYKYGYIQKEEIEKLVSEMIQAGIIRSSRRPYSSPVLLVKKRDGGWRFCVDYCKLNQVTIVDTFPIPVIEELLDELHGAKVF

Query:  SKLDLRSGYLQIRMK-EDSEKTDFRTHEGHYEFFVMSFGLTNASTTFQSLMNQIFRPFLRRFVLVFFFDDILIYSKDITEHERHLGVVFNVMKDNQLSAN
        SKLDL+SGY QIRMK ED EKT FRTHEGHYEF VM FGLTNAS TFQSLMNQ+F+PFLRR VLVF + DIL+YS DI+EHE+HLG+VF +++DNQL AN
Subjt:  SKLDLRSGYLQIRMK-EDSEKTDFRTHEGHYEFFVMSFGLTNASTTFQSLMNQIFRPFLRRFVLVFFFDDILIYSKDITEHERHLGVVFNVMKDNQLSAN

Query:  EKKCMIGHSRVNYLGHWI
        +KKC+  HS++ YLGH I
Subjt:  EKKCMIGHSRVNYLGHWI

A0A5D3DUJ0 Ty3/gypsy retrotransposon protein4.2e-14181.76Show/hide
Query:  MGIHWSSMTMVFMARMTQVVLEGDPSLTKAECSLTTISETWEEEDQGFLLEFQNVEMNIDTEEESEKEEEGEESKLRMINNLLKRYRSIFEMPKRLPQKR
        M IHW SMTMVFM   +QV+L+GDPSLTKAECSL TIS+TWEEEDQGFL+EFQ +E+   +E ESEKEEEGEES L MI NLL + R IFE+PK LP KR
Subjt:  MGIHWSSMTMVFMARMTQVVLEGDPSLTKAECSLTTISETWEEEDQGFLLEFQNVEMNIDTEEESEKEEEGEESKLRMINNLLKRYRSIFEMPKRLPQKR

Query:  VVDHRILIVDGQKPINVHPYKYGYIQKEEIEKLVSEMIQAGIIRSSRRPYSSPVLLVKKRDGGWRFCVDYCKLNQVTIVDTFPIPVIEELLDELHGAKVF
         VDHRILI +GQ PINV PYKYGYIQK EIE+LVSEM+QA IIR SR PYSSPVLLVKK+DGGWRFCVDY KLNQVTI D FPIPVIEELLDELHGA+VF
Subjt:  VVDHRILIVDGQKPINVHPYKYGYIQKEEIEKLVSEMIQAGIIRSSRRPYSSPVLLVKKRDGGWRFCVDYCKLNQVTIVDTFPIPVIEELLDELHGAKVF

Query:  SKLDLRSGYLQIRMK-EDSEKTDFRTHEGHYEFFVMSFGLTNASTTFQSLMNQIFRPFLRRFVLVFFFDDILIYSKDITEHERHLGVVFNVMKDNQLSAN
        SKLDLRSGY QIRMK ED EKT FRTHEGHYEF VM FGLTNA  TFQSLMNQIFRPFLRRFVLV FFDDILIYSK+ITEHE+HLGVVFNVMKDNQL AN
Subjt:  SKLDLRSGYLQIRMK-EDSEKTDFRTHEGHYEFFVMSFGLTNASTTFQSLMNQIFRPFLRRFVLVFFFDDILIYSKDITEHERHLGVVFNVMKDNQLSAN

Query:  EKKCMIGHSRVNYLGHWI
        EKKCMIGHSR+NYLGHWI
Subjt:  EKKCMIGHSRVNYLGHWI

SwissProt top hitse value%identityAlignment
P04323 Retrovirus-related Pol polyprotein from transposon 17.62.5e-3434.98Show/hide
Query:  FQNVEMNIDTEEESEKE----EEGEESKLRMINN--------LLKRYRSI-FEMPKRLPQKRVVDHRILIVDGQKPINVHPYKYGYIQKEEIEKLVSEMI
        FQNV M  DT      +     E +  +L  +NN        LL++Y  I +    +L       H I         + + Y   Y  ++E+E  + +M+
Subjt:  FQNVEMNIDTEEESEKE----EEGEESKLRMINN--------LLKRYRSI-FEMPKRLPQKRVVDHRILIVDGQKPINVHPYKYGYIQKEEIEKLVSEMI

Query:  QAGIIRSSRRPYSSPVLLV-KKRDGG----WRFCVDYCKLNQVTIVDTFPIPVIEELLDELHGAKVFSKLDLRSGYLQIRMKEDS-EKTDFRTHEGHYEF
          GIIR+S  PY+SP+ +V KK+D      +R  +DY KLN++T+ D  PIP ++E+L +L     F+ +DL  G+ QI M  +S  KT F T  GHYE+
Subjt:  QAGIIRSSRRPYSSPVLLV-KKRDGG----WRFCVDYCKLNQVTIVDTFPIPVIEELLDELHGAKVFSKLDLRSGYLQIRMKEDS-EKTDFRTHEGHYEF

Query:  FVMSFGLTNASTTFQSLMNQIFRPFLRRFVLVFFFDDILIYSKDITEHERHLGVVFNVMKDNQLSANEKKCMIGHSRVNYLGH
          M FGL NA  TFQ  MN I RP L +  LV + DDI+++S  + EH + LG+VF  +    L     KC        +LGH
Subjt:  FVMSFGLTNASTTFQSLMNQIFRPFLRRFVLVFFFDDILIYSKDITEHERHLGVVFNVMKDNQLSANEKKCMIGHSRVNYLGH

P20825 Retrovirus-related Pol polyprotein from transposon 2977.1e-3734.71Show/hide
Query:  TWEEEDQGFLLEFQNVEMNIDTEEESEKEEEGEESKLRMIN--------NLLKRYRSI-FEMPKRLPQKRVVDHRILIVDGQKPINVHPYKYGYIQKEEI
        T E E    L   +  E    +++ES K+ +  + +L  +N         LL ++R++ ++  ++L     + H +L      PI    Y      + E+
Subjt:  TWEEEDQGFLLEFQNVEMNIDTEEESEKEEEGEESKLRMIN--------NLLKRYRSI-FEMPKRLPQKRVVDHRILIVDGQKPINVHPYKYGYIQKEEI

Query:  EKLVSEMIQAGIIRSSRRPYSSPVLLVKKRDGG-----WRFCVDYCKLNQVTIVDTFPIPVIEELLDELHGAKVFSKLDLRSGYLQIRMKEDS-EKTDFR
        E  V EM+  G+IR S  PY+SP  +V K+        +R  +DY KLN++TI D +PIP ++E+L +L   + F+ +DL  G+ QI M E+S  KT F 
Subjt:  EKLVSEMIQAGIIRSSRRPYSSPVLLVKKRDGG-----WRFCVDYCKLNQVTIVDTFPIPVIEELLDELHGAKVFSKLDLRSGYLQIRMKEDS-EKTDFR

Query:  THEGHYEFFVMSFGLTNASTTFQSLMNQIFRPFLRRFVLVFFFDDILIYSKDITEHERHLGVVFNVMKDNQLSANEKKCMIGHSRVNYLGH
        T  GHYE+  M FGL NA  TFQ  MN I RP L +  LV + DDI+I+S  +TEH   + +VF  + D  L     KC       N+LGH
Subjt:  THEGHYEFFVMSFGLTNASTTFQSLMNQIFRPFLRRFVLVFFFDDILIYSKDITEHERHLGVVFNVMKDNQLSANEKKCMIGHSRVNYLGH

Q7LHG5 Transposon Ty3-I Gag-Pol polyprotein8.4e-3837.87Show/hide
Query:  EFQNVEMNIDTEEESEKEEEGEESKLRMINNLLKRYRSIF--EMPKRLP--QKRVVDHRILIVDGQKPINVHPYKYGYIQKEEIEKLVSEMIQAGIIRSS
        ++ NV   I + E +  +   +++   +   L ++YR I   ++P R        V H I I  G +   + PY      ++EI K+V +++    I  S
Subjt:  EFQNVEMNIDTEEESEKEEEGEESKLRMINNLLKRYRSIF--EMPKRLP--QKRVVDHRILIVDGQKPINVHPYKYGYIQKEEIEKLVSEMIQAGIIRSS

Query:  RRPYSSPVLLVKKRDGGWRFCVDYCKLNQVTIVDTFPIPVIEELLDELHGAKVFSKLDLRSGYLQIRMK-EDSEKTDFRTHEGHYEFFVMSFGLTNASTT
        + P SSPV+LV K+DG +R CVDY  LN+ TI D FP+P I+ LL  +  A++F+ LDL SGY QI M+ +D  KT F T  G YE+ VM FGL NA +T
Subjt:  RRPYSSPVLLVKKRDGGWRFCVDYCKLNQVTIVDTFPIPVIEELLDELHGAKVFSKLDLRSGYLQIRMK-EDSEKTDFRTHEGHYEFFVMSFGLTNASTT

Query:  FQSLMNQIFRPFLRRFVLVFFFDDILIYSKDITEHERHLGVVFNVMKDNQLSANEKKCMIGHSRVNYLGHWI
        F   M   FR    RFV V + DDILI+S+   EH +HL  V   +K+  L   +KKC        +LG+ I
Subjt:  FQSLMNQIFRPFLRRFVLVFFFDDILIYSKDITEHERHLGVVFNVMKDNQLSANEKKCMIGHSRVNYLGHWI

Q8I7P9 Retrovirus-related Pol polyprotein from transposon opus4.3e-3435.71Show/hide
Query:  EGEESKLRMINNLLKRYRSIFEMPKRLPQKRVVDHRILIVDGQKPINVHPYKYGYIQKEEIEKLVSEMIQAGIIRSSRRPYSSPVLLVKKR-----DGGW
        E  +    ++N+LL  +  IFE P             +  + Q PI    Y Y    + E+E+ + E++Q GIIR S  PY+SP+ +V K+     +  +
Subjt:  EGEESKLRMINNLLKRYRSIFEMPKRLPQKRVVDHRILIVDGQKPINVHPYKYGYIQKEEIEKLVSEMIQAGIIRSSRRPYSSPVLLVKKR-----DGGW

Query:  RFCVDYCKLNQVTIVDTFPIPVIEELLDELHGAKVFSKLDLRSGYLQIRMKE-DSEKTDFRTHEGHYEFFVMSFGLTNASTTFQSLMNQIFRPFLRRFVL
        R  VD+ +LN VTI DT+PIP I   L  L  AK F+ LDL SG+ QI MKE D  KT F T  G YEF  + FGL NA   FQ +++ I R  + + V 
Subjt:  RFCVDYCKLNQVTIVDTFPIPVIEELLDELHGAKVFSKLDLRSGYLQIRMKE-DSEKTDFRTHEGHYEFFVMSFGLTNASTTFQSLMNQIFRPFLRRFVL

Query:  VFFFDDILIYSKDITEHERHLGVVFNVMKDNQLSANEKKCMIGHSRVNYLGH
          + DDI+++S+D   H ++L +V   +    L  N +K     ++V +LG+
Subjt:  VFFFDDILIYSKDITEHERHLGVVFNVMKDNQLSANEKKCMIGHSRVNYLGH

Q99315 Transposon Ty3-G Gag-Pol polyprotein8.4e-3837.87Show/hide
Query:  EFQNVEMNIDTEEESEKEEEGEESKLRMINNLLKRYRSIF--EMPKRLP--QKRVVDHRILIVDGQKPINVHPYKYGYIQKEEIEKLVSEMIQAGIIRSS
        ++ NV   I + E +  +   +++   +   L ++YR I   ++P R        V H I I  G +   + PY      ++EI K+V +++    I  S
Subjt:  EFQNVEMNIDTEEESEKEEEGEESKLRMINNLLKRYRSIF--EMPKRLP--QKRVVDHRILIVDGQKPINVHPYKYGYIQKEEIEKLVSEMIQAGIIRSS

Query:  RRPYSSPVLLVKKRDGGWRFCVDYCKLNQVTIVDTFPIPVIEELLDELHGAKVFSKLDLRSGYLQIRMK-EDSEKTDFRTHEGHYEFFVMSFGLTNASTT
        + P SSPV+LV K+DG +R CVDY  LN+ TI D FP+P I+ LL  +  A++F+ LDL SGY QI M+ +D  KT F T  G YE+ VM FGL NA +T
Subjt:  RRPYSSPVLLVKKRDGGWRFCVDYCKLNQVTIVDTFPIPVIEELLDELHGAKVFSKLDLRSGYLQIRMK-EDSEKTDFRTHEGHYEFFVMSFGLTNASTT

Query:  FQSLMNQIFRPFLRRFVLVFFFDDILIYSKDITEHERHLGVVFNVMKDNQLSANEKKCMIGHSRVNYLGHWI
        F   M   FR    RFV V + DDILI+S+   EH +HL  V   +K+  L   +KKC        +LG+ I
Subjt:  FQSLMNQIFRPFLRRFVLVFFFDDILIYSKDITEHERHLGVVFNVMKDNQLSANEKKCMIGHSRVNYLGHWI

Arabidopsis top hitse value%identityAlignment
ATMG00850.1 DNA/RNA polymerases superfamily protein8.7e-0650Show/hide
Query:  IQKEEIEKLVSEMIQAGIIRSSRRPYSSPVLLVKKRDGGW
        +++  ++  + EM++A II+ S  PYSSPVLLV+K+DGGW
Subjt:  IQKEEIEKLVSEMIQAGIIRSSRRPYSSPVLLVKKRDGGW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGATTCACTGGTCATCAATGACTATGGTGTTTATGGCAAGAATGACGCAAGTGGTGTTAGAAGGAGACCCGTCACTGACAAAGGCAGAGTGTTCTTTGACAACGAT
CTCCGAAACATGGGAAGAGGAGGACCAAGGATTTTTATTAGAATTCCAGAATGTTGAAATGAATATAGACACCGAGGAGGAAAGCGAAAAAGAGGAGGAAGGGGAGGAAT
CGAAATTGCGGATGATTAATAATTTGTTGAAAAGATACAGGAGCATATTTGAGATGCCAAAGAGATTACCTCAGAAAAGAGTCGTGGACCATCGAATATTGATTGTAGAC
GGGCAGAAACCCATCAATGTGCATCCTTACAAGTATGGGTACATACAAAAAGAGGAGATAGAAAAGTTGGTATCGGAAATGATTCAAGCGGGAATTATCAGATCAAGTCG
ACGTCCTTATTCAAGTCCAGTTTTACTAGTAAAGAAACGAGACGGAGGGTGGCGATTCTGCGTTGATTATTGTAAGTTGAATCAGGTGACTATTGTCGATACATTTCCCA
TTCCAGTTATCGAAGAACTACTGGATGAGTTACACGGTGCTAAGGTTTTTTCGAAATTAGATTTACGCTCAGGTTACCTTCAAATTCGGATGAAGGAGGACAGTGAGAAA
ACGGATTTTCGCACCCATGAGGGACACTATGAATTTTTTGTTATGTCTTTTGGTTTAACCAACGCGTCGACAACCTTTCAATCCCTCATGAACCAAATCTTCCGGCCCTT
CCTAAGGCGGTTCGTGCTAGTTTTTTTTTTTGATGACATACTAATTTACAGCAAGGACATCACTGAACATGAGAGGCATTTGGGAGTAGTTTTTAATGTGATGAAGGATA
ATCAGCTGTCTGCTAACGAAAAGAAATGCATGATCGGACACTCAAGAGTCAATTATTTGGGCCATTGGATATAG
mRNA sequenceShow/hide mRNA sequence
ATGGGGATTCACTGGTCATCAATGACTATGGTGTTTATGGCAAGAATGACGCAAGTGGTGTTAGAAGGAGACCCGTCACTGACAAAGGCAGAGTGTTCTTTGACAACGAT
CTCCGAAACATGGGAAGAGGAGGACCAAGGATTTTTATTAGAATTCCAGAATGTTGAAATGAATATAGACACCGAGGAGGAAAGCGAAAAAGAGGAGGAAGGGGAGGAAT
CGAAATTGCGGATGATTAATAATTTGTTGAAAAGATACAGGAGCATATTTGAGATGCCAAAGAGATTACCTCAGAAAAGAGTCGTGGACCATCGAATATTGATTGTAGAC
GGGCAGAAACCCATCAATGTGCATCCTTACAAGTATGGGTACATACAAAAAGAGGAGATAGAAAAGTTGGTATCGGAAATGATTCAAGCGGGAATTATCAGATCAAGTCG
ACGTCCTTATTCAAGTCCAGTTTTACTAGTAAAGAAACGAGACGGAGGGTGGCGATTCTGCGTTGATTATTGTAAGTTGAATCAGGTGACTATTGTCGATACATTTCCCA
TTCCAGTTATCGAAGAACTACTGGATGAGTTACACGGTGCTAAGGTTTTTTCGAAATTAGATTTACGCTCAGGTTACCTTCAAATTCGGATGAAGGAGGACAGTGAGAAA
ACGGATTTTCGCACCCATGAGGGACACTATGAATTTTTTGTTATGTCTTTTGGTTTAACCAACGCGTCGACAACCTTTCAATCCCTCATGAACCAAATCTTCCGGCCCTT
CCTAAGGCGGTTCGTGCTAGTTTTTTTTTTTGATGACATACTAATTTACAGCAAGGACATCACTGAACATGAGAGGCATTTGGGAGTAGTTTTTAATGTGATGAAGGATA
ATCAGCTGTCTGCTAACGAAAAGAAATGCATGATCGGACACTCAAGAGTCAATTATTTGGGCCATTGGATATAG
Protein sequenceShow/hide protein sequence
MGIHWSSMTMVFMARMTQVVLEGDPSLTKAECSLTTISETWEEEDQGFLLEFQNVEMNIDTEEESEKEEEGEESKLRMINNLLKRYRSIFEMPKRLPQKRVVDHRILIVD
GQKPINVHPYKYGYIQKEEIEKLVSEMIQAGIIRSSRRPYSSPVLLVKKRDGGWRFCVDYCKLNQVTIVDTFPIPVIEELLDELHGAKVFSKLDLRSGYLQIRMKEDSEK
TDFRTHEGHYEFFVMSFGLTNASTTFQSLMNQIFRPFLRRFVLVFFFDDILIYSKDITEHERHLGVVFNVMKDNQLSANEKKCMIGHSRVNYLGHWI