| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0025945.1 gag/pol protein [Cucumis melo var. makuwa] | 5.4e-104 | 96 | Show/hide |
Query: MLKSIRILLSITTFYDYEIWQMDVKTAFLNSNLEESIFMSQPQGFITQGQEQKVCKLNQSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKG
MLKSIRILLSI TFYDYEIWQMDVKTAFLN NLEESIFMSQP+GFITQGQEQKVCKLN+SIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKG
Subjt: MLKSIRILLSITTFYDYEIWQMDVKTAFLNSNLEESIFMSQPQGFITQGQEQKVCKLNQSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKG
Query: KVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGETQYVLGIQIIRDRKNKMLALSQATYIDKMLVRYSMQNSKKGLLPFRHGVHLSKEQCPKTP
KVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGE QYVLGIQIIRDRKNK LALSQATYIDK+LVRYSMQNSKKGLLPFRHGVHLSKEQ PKTP
Subjt: KVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGETQYVLGIQIIRDRKNKMLALSQATYIDKMLVRYSMQNSKKGLLPFRHGVHLSKEQCPKTP
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| KAA0033121.1 gag/pol protein [Cucumis melo var. makuwa] | 1.6e-103 | 95 | Show/hide |
Query: MLKSIRILLSITTFYDYEIWQMDVKTAFLNSNLEESIFMSQPQGFITQGQEQKVCKLNQSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKG
MLKSIRILLSI TFYDYEIW+MDV TAFLN NLEESIFMSQP+GFITQGQEQKVCKLN+SIYGLKQASRSWNIRFDTAIKSYGF+QNVDEPCVYKKINKG
Subjt: MLKSIRILLSITTFYDYEIWQMDVKTAFLNSNLEESIFMSQPQGFITQGQEQKVCKLNQSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKG
Query: KVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGETQYVLGIQIIRDRKNKMLALSQATYIDKMLVRYSMQNSKKGLLPFRHGVHLSKEQCPKTP
KV FLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGE QYVLGIQIIRDRKNK LALSQATYIDKMLVRYSMQNSKKGLLPFRHGVHLSKEQCPKTP
Subjt: KVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGETQYVLGIQIIRDRKNKMLALSQATYIDKMLVRYSMQNSKKGLLPFRHGVHLSKEQCPKTP
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| KAA0040367.1 gag/pol protein [Cucumis melo var. makuwa] | 4.1e-104 | 95.5 | Show/hide |
Query: MLKSIRILLSITTFYDYEIWQMDVKTAFLNSNLEESIFMSQPQGFITQGQEQKVCKLNQSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKG
MLKSIRILLSI TFYDYEIWQMDVKTAFLN NLEESIFMSQP+GFITQGQEQKVCKLN+SIYGLKQ+SRSWN+RFDTAIKSYGFDQNVDEPCVYKKINKG
Subjt: MLKSIRILLSITTFYDYEIWQMDVKTAFLNSNLEESIFMSQPQGFITQGQEQKVCKLNQSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKG
Query: KVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGETQYVLGIQIIRDRKNKMLALSQATYIDKMLVRYSMQNSKKGLLPFRHGVHLSKEQCPKTP
KVAFLVLYVDDILLIGNDVGYLTDVKAWLA QFQMKDLGETQYVLGIQIIRDRKNK LALSQATYIDKMLVRYSMQNSKK LLPFRHGVHLSKEQCPKTP
Subjt: KVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGETQYVLGIQIIRDRKNKMLALSQATYIDKMLVRYSMQNSKKGLLPFRHGVHLSKEQCPKTP
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| KAA0059226.1 gag/pol protein [Cucumis melo var. makuwa] | 5.4e-104 | 96 | Show/hide |
Query: MLKSIRILLSITTFYDYEIWQMDVKTAFLNSNLEESIFMSQPQGFITQGQEQKVCKLNQSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKG
MLKSIRILLSI TFYDYEIWQMDVKTAFLN NLEESIFMSQP+GFITQGQEQKVCKLN+SIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKG
Subjt: MLKSIRILLSITTFYDYEIWQMDVKTAFLNSNLEESIFMSQPQGFITQGQEQKVCKLNQSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKG
Query: KVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGETQYVLGIQIIRDRKNKMLALSQATYIDKMLVRYSMQNSKKGLLPFRHGVHLSKEQCPKTP
KVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGE QYVLGIQIIRDRKNK LALSQATYIDK+LVRYSMQNSKKGLLPFRHGVHLSKEQ PKTP
Subjt: KVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGETQYVLGIQIIRDRKNKMLALSQATYIDKMLVRYSMQNSKKGLLPFRHGVHLSKEQCPKTP
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| KAA0059556.1 gag/pol protein [Cucumis melo var. makuwa] | 3.1e-104 | 95.5 | Show/hide |
Query: MLKSIRILLSITTFYDYEIWQMDVKTAFLNSNLEESIFMSQPQGFITQGQEQKVCKLNQSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKG
MLKSIRILLSI TFYDYEIWQMDVKTAFLN NLEESIFMSQP+GFITQGQEQKVCKLN+SIYGLKQASRSWNIRFDTAIK YGFDQNVDEPCVYKKINKG
Subjt: MLKSIRILLSITTFYDYEIWQMDVKTAFLNSNLEESIFMSQPQGFITQGQEQKVCKLNQSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKG
Query: KVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGETQYVLGIQIIRDRKNKMLALSQATYIDKMLVRYSMQNSKKGLLPFRHGVHLSKEQCPKTP
KVAFLVLY+DDILLIGNDVGYLTDVKAWLAAQFQMKD+GE QYVLGIQIIRDRKNK LALSQATYIDKMLVRYSMQNSKKGLLPFRHGVHLSKEQCPKTP
Subjt: KVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGETQYVLGIQIIRDRKNKMLALSQATYIDKMLVRYSMQNSKKGLLPFRHGVHLSKEQCPKTP
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7TZD0 Gag/pol protein | 2.6e-104 | 96 | Show/hide |
Query: MLKSIRILLSITTFYDYEIWQMDVKTAFLNSNLEESIFMSQPQGFITQGQEQKVCKLNQSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKG
MLKSIRILLSI TFYDYEIWQMDVKTAFLN NLEESIFMSQP+GFITQGQEQKVCKLN+SIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKG
Subjt: MLKSIRILLSITTFYDYEIWQMDVKTAFLNSNLEESIFMSQPQGFITQGQEQKVCKLNQSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKG
Query: KVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGETQYVLGIQIIRDRKNKMLALSQATYIDKMLVRYSMQNSKKGLLPFRHGVHLSKEQCPKTP
KVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGE QYVLGIQIIRDRKNK LALSQATYIDK+LVRYSMQNSKKGLLPFRHGVHLSKEQ PKTP
Subjt: KVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGETQYVLGIQIIRDRKNKMLALSQATYIDKMLVRYSMQNSKKGLLPFRHGVHLSKEQCPKTP
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| A0A5A7UYE8 Gag/pol protein | 2.6e-104 | 96 | Show/hide |
Query: MLKSIRILLSITTFYDYEIWQMDVKTAFLNSNLEESIFMSQPQGFITQGQEQKVCKLNQSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKG
MLKSIRILLSI TFYDYEIWQMDVKTAFLN NLEESIFMSQP+GFITQGQEQKVCKLN+SIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKG
Subjt: MLKSIRILLSITTFYDYEIWQMDVKTAFLNSNLEESIFMSQPQGFITQGQEQKVCKLNQSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKG
Query: KVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGETQYVLGIQIIRDRKNKMLALSQATYIDKMLVRYSMQNSKKGLLPFRHGVHLSKEQCPKTP
KVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGE QYVLGIQIIRDRKNK LALSQATYIDK+LVRYSMQNSKKGLLPFRHGVHLSKEQ PKTP
Subjt: KVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGETQYVLGIQIIRDRKNKMLALSQATYIDKMLVRYSMQNSKKGLLPFRHGVHLSKEQCPKTP
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| A0A5A7UZF3 Gag/pol protein | 1.5e-104 | 95.5 | Show/hide |
Query: MLKSIRILLSITTFYDYEIWQMDVKTAFLNSNLEESIFMSQPQGFITQGQEQKVCKLNQSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKG
MLKSIRILLSI TFYDYEIWQMDVKTAFLN NLEESIFMSQP+GFITQGQEQKVCKLN+SIYGLKQASRSWNIRFDTAIK YGFDQNVDEPCVYKKINKG
Subjt: MLKSIRILLSITTFYDYEIWQMDVKTAFLNSNLEESIFMSQPQGFITQGQEQKVCKLNQSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKG
Query: KVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGETQYVLGIQIIRDRKNKMLALSQATYIDKMLVRYSMQNSKKGLLPFRHGVHLSKEQCPKTP
KVAFLVLY+DDILLIGNDVGYLTDVKAWLAAQFQMKD+GE QYVLGIQIIRDRKNK LALSQATYIDKMLVRYSMQNSKKGLLPFRHGVHLSKEQCPKTP
Subjt: KVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGETQYVLGIQIIRDRKNKMLALSQATYIDKMLVRYSMQNSKKGLLPFRHGVHLSKEQCPKTP
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| A0A5D3CZY3 Gag/pol protein | 7.5e-104 | 95 | Show/hide |
Query: MLKSIRILLSITTFYDYEIWQMDVKTAFLNSNLEESIFMSQPQGFITQGQEQKVCKLNQSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKG
MLKSIRILLSI TFYDYEIW+MDV TAFLN NLEESIFMSQP+GFITQGQEQKVCKLN+SIYGLKQASRSWNIRFDTAIKSYGF+QNVDEPCVYKKINKG
Subjt: MLKSIRILLSITTFYDYEIWQMDVKTAFLNSNLEESIFMSQPQGFITQGQEQKVCKLNQSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKG
Query: KVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGETQYVLGIQIIRDRKNKMLALSQATYIDKMLVRYSMQNSKKGLLPFRHGVHLSKEQCPKTP
KV FLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGE QYVLGIQIIRDRKNK LALSQATYIDKMLVRYSMQNSKKGLLPFRHGVHLSKEQCPKTP
Subjt: KVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGETQYVLGIQIIRDRKNKMLALSQATYIDKMLVRYSMQNSKKGLLPFRHGVHLSKEQCPKTP
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| A0A5D3DI92 Gag/pol protein | 2.0e-104 | 95.5 | Show/hide |
Query: MLKSIRILLSITTFYDYEIWQMDVKTAFLNSNLEESIFMSQPQGFITQGQEQKVCKLNQSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKG
MLKSIRILLSI TFYDYEIWQMDVKTAFLN NLEESIFMSQP+GFITQGQEQKVCKLN+SIYGLKQ+SRSWN+RFDTAIKSYGFDQNVDEPCVYKKINKG
Subjt: MLKSIRILLSITTFYDYEIWQMDVKTAFLNSNLEESIFMSQPQGFITQGQEQKVCKLNQSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKG
Query: KVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGETQYVLGIQIIRDRKNKMLALSQATYIDKMLVRYSMQNSKKGLLPFRHGVHLSKEQCPKTP
KVAFLVLYVDDILLIGNDVGYLTDVKAWLA QFQMKDLGETQYVLGIQIIRDRKNK LALSQATYIDKMLVRYSMQNSKK LLPFRHGVHLSKEQCPKTP
Subjt: KVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGETQYVLGIQIIRDRKNKMLALSQATYIDKMLVRYSMQNSKKGLLPFRHGVHLSKEQCPKTP
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 2.2e-28 | 38.2 | Show/hide |
Query: LKSIRILLSITTFYDYEIWQMDVKTAFLNSNLEESIFMSQPQGFITQGQEQKVCKLNQSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVY--KKINK
+ S R +LS+ Y+ ++ QMDVKTAFLN L+E I+M PQG VCKLN++IYGLKQA+R W F+ A+K F + + C+Y K N
Subjt: LKSIRILLSITTFYDYEIWQMDVKTAFLNSNLEESIFMSQPQGFITQGQEQKVCKLNQSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVY--KKINK
Query: GKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGETQYVLGIQIIRDRKNKMLALSQATYIDKMLVRYSMQN
+ +++LYVDD+++ D+ + + K +L +F+M DL E ++ +GI+I + + + LSQ+ Y+ K+L +++M+N
Subjt: GKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGETQYVLGIQIIRDRKNKMLALSQATYIDKMLVRYSMQN
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 2.4e-46 | 45.23 | Show/hide |
Query: LKSIRILLSITTFYDYEIWQMDVKTAFLNSNLEESIFMSQPQGFITQGQEQKVCKLNQSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVY-KKINKG
+ SIR +LS+ D E+ Q+DVKTAFL+ +LEE I+M QP+GF G++ VCKLN+S+YGLKQA R W ++FD+ +KS + + +PCVY K+ ++
Subjt: LKSIRILLSITTFYDYEIWQMDVKTAFLNSNLEESIFMSQPQGFITQGQEQKVCKLNQSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVY-KKINKG
Query: KVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGETQYVLGIQIIRDRKNKMLALSQATYIDKMLVRYSMQNSKKGLLPFRHGVHLSKEQCPKT
L+LYVDD+L++G D G + +K L+ F MKDLG Q +LG++I+R+R ++ L LSQ YI+++L R++M+N+K P + LSK+ CP T
Subjt: KVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGETQYVLGIQIIRDRKNKMLALSQATYIDKMLVRYSMQNSKKGLLPFRHGVHLSKEQCPKT
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| P25600 Putative transposon Ty5-1 protein YCL074W | 1.8e-17 | 35.37 | Show/hide |
Query: MDVKTAFLNSNLEESIFMSQPQGFITQGQEQKVCKLNQSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGY
MDV TAFLNS ++E I++ QP GF+ + V +L +YGLKQA WN + +K GF ++ E +Y + ++ +YVDD+L+
Subjt: MDVKTAFLNSNLEESIFMSQPQGFITQGQEQKVCKLNQSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGY
Query: LTDVKAWLAAQFQMKDLGETQYVLGIQIIRDRKNKMLALSQATYIDK
VK L + MKDLG+ LG+ I N + LS YI K
Subjt: LTDVKAWLAAQFQMKDLGETQYVLGIQIIRDRKNKMLALSQATYIDK
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 3.9e-25 | 35.98 | Show/hide |
Query: SIRILLSITTFYDYEIWQMDVKTAFLNSNLEESIFMSQPQGFITQGQEQKVCKLNQSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVA
SIRI+L + + I Q+DV AFL L + ++MSQP GFI + + VCKL +++YGLKQA R+W + + + GF +V + ++ +
Subjt: SIRILLSITTFYDYEIWQMDVKTAFLNSNLEESIFMSQPQGFITQGQEQKVCKLNQSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVA
Query: FLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGETQYVLGIQIIRDRKNKMLALSQATYIDKMLVRYSMQNSKKGLLPFRHGVHLS
++++YVDDIL+ GND L + L+ +F +KD E Y LGI+ R L LSQ YI +L R +M +K P LS
Subjt: FLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGETQYVLGIQIIRDRKNKMLALSQATYIDKMLVRYSMQNSKKGLLPFRHGVHLS
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 1.5e-24 | 32.99 | Show/hide |
Query: SIRILLSITTFYDYEIWQMDVKTAFLNSNLEESIFMSQPQGFITQGQEQKVCKLNQSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVA
SIRI+L + + I Q+DV AFL L + ++MSQP GF+ + + VC+L ++IYGLKQA R+W + T + + GF ++ + ++ +
Subjt: SIRILLSITTFYDYEIWQMDVKTAFLNSNLEESIFMSQPQGFITQGQEQKVCKLNQSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVA
Query: FLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGETQYVLGIQIIRDRKNKMLALSQATYIDKMLVRYSMQNSKKGLLPFRHGVHLSKEQCPKTP
++++YVDDIL+ GND L L+ +F +K+ + Y LGI+ R + L LSQ Y +L R +M +K P L+ K P
Subjt: FLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGETQYVLGIQIIRDRKNKMLALSQATYIDKMLVRYSMQNSKKGLLPFRHGVHLSKEQCPKTP
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