; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc09g0247551 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc09g0247551
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionPolygalacturonase-like
Genome locationCMiso1.1chr09:12332130..12332960
RNA-Seq ExpressionCmc09g0247551
SyntenyCmc09g0247551
Gene Ontology termsGO:0005975 - carbohydrate metabolic process (biological process)
GO:0004650 - polygalacturonase activity (molecular function)
InterPro domainsIPR000743 - Glycoside hydrolase, family 28
IPR011050 - Pectin lyase fold/virulence factor
IPR012334 - Pectin lyase fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0062404.1 polygalacturonase-like [Cucumis melo var. makuwa]9.3e-135100Show/hide
Query:  MPLVGNLHLLFLLFLFLNHGLAAGSTFNIVSLGAKADGMTDASPAFQEAWANACGSSEPATIYVPNGAFYVHSGNFTGPCKNNAITVLINGTLMASSNIQ
        MPLVGNLHLLFLLFLFLNHGLAAGSTFNIVSLGAKADGMTDASPAFQEAWANACGSSEPATIYVPNGAFYVHSGNFTGPCKNNAITVLINGTLMASSNIQ
Subjt:  MPLVGNLHLLFLLFLFLNHGLAAGSTFNIVSLGAKADGMTDASPAFQEAWANACGSSEPATIYVPNGAFYVHSGNFTGPCKNNAITVLINGTLMASSNIQ

Query:  VLAQSQAWIAFRHINGLSIYGGVIDGQGMGLWNCKHSGQSCPDGATSLEIFDSQNVNVNGLSSVNSQMFNIVVYGCQNVQIQGVNVSSASDSPNTDGIHV
        VLAQSQAWIAFRHINGLSIYGGVIDGQGMGLWNCKHSGQSCPDGATSLEIFDSQNVNVNGLSSVNSQMFNIVVYGCQNVQIQGVNVSSASDSPNTDGIHV
Subjt:  VLAQSQAWIAFRHINGLSIYGGVIDGQGMGLWNCKHSGQSCPDGATSLEIFDSQNVNVNGLSSVNSQMFNIVVYGCQNVQIQGVNVSSASDSPNTDGIHV

Query:  QQSLNVNISNSNIGTGDDCISIGPGTTNLWMENINCGPGHGI
        QQSLNVNISNSNIGTGDDCISIGPGTTNLWMENINCGPGHGI
Subjt:  QQSLNVNISNSNIGTGDDCISIGPGTTNLWMENINCGPGHGI

KAE8648418.1 hypothetical protein Csa_008806 [Cucumis sativus]3.8e-12089.67Show/hide
Query:  MPLVGNLHLLFLLFLFLNHGLAAGSTFNIVSLGAKADGMTDASPAFQEAWANACGSSEPATIYVPNGAFYVHSGNFTGPCKNNAITVLINGTLMASSNIQ
        MPLVGNL LL LLFLFLNHGLAAGSTFNIVSLGA ADG TDAS AFQEAWANACGSSEPATIYVPNGAFY+ SGNF+GPCKNNAIT++INGTL+ASSNIQ
Subjt:  MPLVGNLHLLFLLFLFLNHGLAAGSTFNIVSLGAKADGMTDASPAFQEAWANACGSSEPATIYVPNGAFYVHSGNFTGPCKNNAITVLINGTLMASSNIQ

Query:  VLAQSQAWIAFRHINGLSIYGGVIDGQGMGLWNCKHSGQSCPDGATSLEIFDSQNVNVNGLSSVNSQMFNIVVYGCQNVQIQGVNVSSASDSPNTDGIHV
        VLAQSQAWIAFR INGLSIYGGVIDGQG+GLWNCKHSG+SCPDGAT+LEI  +QNVNVNGLSS+NSQMFNIVVYGC+NVQIQGVNVSSA DSPNTDGIHV
Subjt:  VLAQSQAWIAFRHINGLSIYGGVIDGQGMGLWNCKHSGQSCPDGATSLEIFDSQNVNVNGLSSVNSQMFNIVVYGCQNVQIQGVNVSSASDSPNTDGIHV

Query:  QQSLNVNISNSNIGTGDDCISIGPGTTNLWMENINCGPGHGI
        QQSLNVNIS+++IGTGDDCISIGPGTTNLWMENI CGPGHGI
Subjt:  QQSLNVNISNSNIGTGDDCISIGPGTTNLWMENINCGPGHGI

XP_004140371.1 polygalacturonase [Cucumis sativus]3.8e-12089.67Show/hide
Query:  MPLVGNLHLLFLLFLFLNHGLAAGSTFNIVSLGAKADGMTDASPAFQEAWANACGSSEPATIYVPNGAFYVHSGNFTGPCKNNAITVLINGTLMASSNIQ
        MPLVGNL LL LLFLFLNHGLAAGSTFNIVSLGA ADG TDAS AFQEAWANACGSSEPATIYVPNGAFY+ SGNF+GPCKNNAIT++INGTL+ASSNIQ
Subjt:  MPLVGNLHLLFLLFLFLNHGLAAGSTFNIVSLGAKADGMTDASPAFQEAWANACGSSEPATIYVPNGAFYVHSGNFTGPCKNNAITVLINGTLMASSNIQ

Query:  VLAQSQAWIAFRHINGLSIYGGVIDGQGMGLWNCKHSGQSCPDGATSLEIFDSQNVNVNGLSSVNSQMFNIVVYGCQNVQIQGVNVSSASDSPNTDGIHV
        VLAQSQAWIAFR INGLSIYGGVIDGQG+GLWNCKHSG+SCPDGAT+LEI  +QNVNVNGLSS+NSQMFNIVVYGC+NVQIQGVNVSSA DSPNTDGIHV
Subjt:  VLAQSQAWIAFRHINGLSIYGGVIDGQGMGLWNCKHSGQSCPDGATSLEIFDSQNVNVNGLSSVNSQMFNIVVYGCQNVQIQGVNVSSASDSPNTDGIHV

Query:  QQSLNVNISNSNIGTGDDCISIGPGTTNLWMENINCGPGHGI
        QQSLNVNIS+++IGTGDDCISIGPGTTNLWMENI CGPGHGI
Subjt:  QQSLNVNISNSNIGTGDDCISIGPGTTNLWMENINCGPGHGI

XP_008460550.1 PREDICTED: polygalacturonase-like [Cucumis melo]1.2e-13499.59Show/hide
Query:  MPLVGNLHLLFLLFLFLNHGLAAGSTFNIVSLGAKADGMTDASPAFQEAWANACGSSEPATIYVPNGAFYVHSGNFTGPCKNNAITVLINGTLMASSNIQ
        MPLVGNLHLLFLLFLFLNHGLAAGSTFNIVSLGAKADGMTDASPAFQEAWANACGSSEPATIYVPNGAFYVHSGNFTGPCKNNAIT+LINGTLMASSNIQ
Subjt:  MPLVGNLHLLFLLFLFLNHGLAAGSTFNIVSLGAKADGMTDASPAFQEAWANACGSSEPATIYVPNGAFYVHSGNFTGPCKNNAITVLINGTLMASSNIQ

Query:  VLAQSQAWIAFRHINGLSIYGGVIDGQGMGLWNCKHSGQSCPDGATSLEIFDSQNVNVNGLSSVNSQMFNIVVYGCQNVQIQGVNVSSASDSPNTDGIHV
        VLAQSQAWIAFRHINGLSIYGGVIDGQGMGLWNCKHSGQSCPDGATSLEIFDSQNVNVNGLSSVNSQMFNIVVYGCQNVQIQGVNVSSASDSPNTDGIHV
Subjt:  VLAQSQAWIAFRHINGLSIYGGVIDGQGMGLWNCKHSGQSCPDGATSLEIFDSQNVNVNGLSSVNSQMFNIVVYGCQNVQIQGVNVSSASDSPNTDGIHV

Query:  QQSLNVNISNSNIGTGDDCISIGPGTTNLWMENINCGPGHGI
        QQSLNVNISNSNIGTGDDCISIGPGTTNLWMENINCGPGHGI
Subjt:  QQSLNVNISNSNIGTGDDCISIGPGTTNLWMENINCGPGHGI

XP_038887074.1 polygalacturonase-like [Benincasa hispida]5.5e-10377.37Show/hide
Query:  MPLVGNLHLLF-LLFLFLNHGLAAGSTFNIVSLGAKADGMTDASPAFQEAWANACGSSEPATIYVPNGAFYVHSGNFTGPCKNNAITVLINGTLMASSNI
        MP++G L LL  LL LF  H LA G TF+IVSLGAK +G TD+SPAFQ AW NAC SS PATIYVPNG FYV SGNF GPCKNNAIT+LI+GTLMASS+I
Subjt:  MPLVGNLHLLF-LLFLFLNHGLAAGSTFNIVSLGAKADGMTDASPAFQEAWANACGSSEPATIYVPNGAFYVHSGNFTGPCKNNAITVLINGTLMASSNI

Query:  QVLAQSQAWIAFRHINGLSIYGGVIDGQGMGLWNCKHSGQSCPDGATSLEIFDSQNVNVNGLSSVNSQMFNIVVYGCQNVQIQGVNVSSASDSPNTDGIH
        QVLAQ+++WI+F+ INGLSI GGV+DGQG+GLWNCKHSGQSCPDGAT+L I ++QNV V+GLSSVNSQMFNIVV+GCQNV +QG+NVS A DSPNTDGIH
Subjt:  QVLAQSQAWIAFRHINGLSIYGGVIDGQGMGLWNCKHSGQSCPDGATSLEIFDSQNVNVNGLSSVNSQMFNIVVYGCQNVQIQGVNVSSASDSPNTDGIH

Query:  VQQSLNVNISNSNIGTGDDCISIGPGTTNLWMENINCGPGHGI
        V+QSLNV I NS+IGTGDDCISIGPGTTNLWMENI CGPGHG+
Subjt:  VQQSLNVNISNSNIGTGDDCISIGPGTTNLWMENINCGPGHGI

TrEMBL top hitse value%identityAlignment
A0A0A0KN91 Uncharacterized protein1.8e-12089.67Show/hide
Query:  MPLVGNLHLLFLLFLFLNHGLAAGSTFNIVSLGAKADGMTDASPAFQEAWANACGSSEPATIYVPNGAFYVHSGNFTGPCKNNAITVLINGTLMASSNIQ
        MPLVGNL LL LLFLFLNHGLAAGSTFNIVSLGA ADG TDAS AFQEAWANACGSSEPATIYVPNGAFY+ SGNF+GPCKNNAIT++INGTL+ASSNIQ
Subjt:  MPLVGNLHLLFLLFLFLNHGLAAGSTFNIVSLGAKADGMTDASPAFQEAWANACGSSEPATIYVPNGAFYVHSGNFTGPCKNNAITVLINGTLMASSNIQ

Query:  VLAQSQAWIAFRHINGLSIYGGVIDGQGMGLWNCKHSGQSCPDGATSLEIFDSQNVNVNGLSSVNSQMFNIVVYGCQNVQIQGVNVSSASDSPNTDGIHV
        VLAQSQAWIAFR INGLSIYGGVIDGQG+GLWNCKHSG+SCPDGAT+LEI  +QNVNVNGLSS+NSQMFNIVVYGC+NVQIQGVNVSSA DSPNTDGIHV
Subjt:  VLAQSQAWIAFRHINGLSIYGGVIDGQGMGLWNCKHSGQSCPDGATSLEIFDSQNVNVNGLSSVNSQMFNIVVYGCQNVQIQGVNVSSASDSPNTDGIHV

Query:  QQSLNVNISNSNIGTGDDCISIGPGTTNLWMENINCGPGHGI
        QQSLNVNIS+++IGTGDDCISIGPGTTNLWMENI CGPGHGI
Subjt:  QQSLNVNISNSNIGTGDDCISIGPGTTNLWMENINCGPGHGI

A0A1S3CCA2 polygalacturonase-like5.9e-13599.59Show/hide
Query:  MPLVGNLHLLFLLFLFLNHGLAAGSTFNIVSLGAKADGMTDASPAFQEAWANACGSSEPATIYVPNGAFYVHSGNFTGPCKNNAITVLINGTLMASSNIQ
        MPLVGNLHLLFLLFLFLNHGLAAGSTFNIVSLGAKADGMTDASPAFQEAWANACGSSEPATIYVPNGAFYVHSGNFTGPCKNNAIT+LINGTLMASSNIQ
Subjt:  MPLVGNLHLLFLLFLFLNHGLAAGSTFNIVSLGAKADGMTDASPAFQEAWANACGSSEPATIYVPNGAFYVHSGNFTGPCKNNAITVLINGTLMASSNIQ

Query:  VLAQSQAWIAFRHINGLSIYGGVIDGQGMGLWNCKHSGQSCPDGATSLEIFDSQNVNVNGLSSVNSQMFNIVVYGCQNVQIQGVNVSSASDSPNTDGIHV
        VLAQSQAWIAFRHINGLSIYGGVIDGQGMGLWNCKHSGQSCPDGATSLEIFDSQNVNVNGLSSVNSQMFNIVVYGCQNVQIQGVNVSSASDSPNTDGIHV
Subjt:  VLAQSQAWIAFRHINGLSIYGGVIDGQGMGLWNCKHSGQSCPDGATSLEIFDSQNVNVNGLSSVNSQMFNIVVYGCQNVQIQGVNVSSASDSPNTDGIHV

Query:  QQSLNVNISNSNIGTGDDCISIGPGTTNLWMENINCGPGHGI
        QQSLNVNISNSNIGTGDDCISIGPGTTNLWMENINCGPGHGI
Subjt:  QQSLNVNISNSNIGTGDDCISIGPGTTNLWMENINCGPGHGI

A0A5D3DS41 Polygalacturonase-like4.5e-135100Show/hide
Query:  MPLVGNLHLLFLLFLFLNHGLAAGSTFNIVSLGAKADGMTDASPAFQEAWANACGSSEPATIYVPNGAFYVHSGNFTGPCKNNAITVLINGTLMASSNIQ
        MPLVGNLHLLFLLFLFLNHGLAAGSTFNIVSLGAKADGMTDASPAFQEAWANACGSSEPATIYVPNGAFYVHSGNFTGPCKNNAITVLINGTLMASSNIQ
Subjt:  MPLVGNLHLLFLLFLFLNHGLAAGSTFNIVSLGAKADGMTDASPAFQEAWANACGSSEPATIYVPNGAFYVHSGNFTGPCKNNAITVLINGTLMASSNIQ

Query:  VLAQSQAWIAFRHINGLSIYGGVIDGQGMGLWNCKHSGQSCPDGATSLEIFDSQNVNVNGLSSVNSQMFNIVVYGCQNVQIQGVNVSSASDSPNTDGIHV
        VLAQSQAWIAFRHINGLSIYGGVIDGQGMGLWNCKHSGQSCPDGATSLEIFDSQNVNVNGLSSVNSQMFNIVVYGCQNVQIQGVNVSSASDSPNTDGIHV
Subjt:  VLAQSQAWIAFRHINGLSIYGGVIDGQGMGLWNCKHSGQSCPDGATSLEIFDSQNVNVNGLSSVNSQMFNIVVYGCQNVQIQGVNVSSASDSPNTDGIHV

Query:  QQSLNVNISNSNIGTGDDCISIGPGTTNLWMENINCGPGHGI
        QQSLNVNISNSNIGTGDDCISIGPGTTNLWMENINCGPGHGI
Subjt:  QQSLNVNISNSNIGTGDDCISIGPGTTNLWMENINCGPGHGI

A0A6J1F386 polygalacturonase-like1.5e-9371.6Show/hide
Query:  MPLVGNLHL-LFLLFLFLNHGLAAGSTFNIVSLGAKADGMTDASPAFQEAWANACGSSEPATIYVPNGAFYVHSGNFTGPCKNNAITVLINGTLMASSNI
        M L+G LH+ L LL LF NH  A G TFNIV+LGAK+DG  D SP  Q AW  AC SS+P TIYVP G FYV S +F GPCKNNAIT+LI+GTL+AS NI
Subjt:  MPLVGNLHL-LFLLFLFLNHGLAAGSTFNIVSLGAKADGMTDASPAFQEAWANACGSSEPATIYVPNGAFYVHSGNFTGPCKNNAITVLINGTLMASSNI

Query:  QVLAQSQAWIAFRHINGLSIYGGVIDGQGMGLWNCKHSGQSCPDGATSLEIFDSQNVNVNGLSSVNSQMFNIVVYGCQNVQIQGVNVSSASDSPNTDGIH
        QVLA++++W+ F HINGLSI GGVIDGQG  LW+CK SG+SCP+GA SL+I D++NVN+  LSS+NSQMFNIVV+GCQNV + GV+VSSA DSPNTDGIH
Subjt:  QVLAQSQAWIAFRHINGLSIYGGVIDGQGMGLWNCKHSGQSCPDGATSLEIFDSQNVNVNGLSSVNSQMFNIVVYGCQNVQIQGVNVSSASDSPNTDGIH

Query:  VQQSLNVNISNSNIGTGDDCISIGPGTTNLWMENINCGPGHGI
        VQQS NV I NSNIGTGDDCISIGPGT+NLWMENI CGPGHGI
Subjt:  VQQSLNVNISNSNIGTGDDCISIGPGTTNLWMENINCGPGHGI

A0A6J1IEE8 polygalacturonase-like8.6e-9472.84Show/hide
Query:  MPLVGNLHL-LFLLFLFLNHGLAAGSTFNIVSLGAKADGMTDASPAFQEAWANACGSSEPATIYVPNGAFYVHSGNFTGPCKNNAITVLINGTLMASSNI
        M L+ +LH+ L LL LF NH LA G TFNIVSLGAK+DG  D S   Q AWA AC SS+P TIYVP G FYV S +F GPCKNNAIT+LI+GTL+ASSNI
Subjt:  MPLVGNLHL-LFLLFLFLNHGLAAGSTFNIVSLGAKADGMTDASPAFQEAWANACGSSEPATIYVPNGAFYVHSGNFTGPCKNNAITVLINGTLMASSNI

Query:  QVLAQSQAWIAFRHINGLSIYGGVIDGQGMGLWNCKHSGQSCPDGATSLEIFDSQNVNVNGLSSVNSQMFNIVVYGCQNVQIQGVNVSSASDSPNTDGIH
        QVLA+++ W+ F HINGLSI GGVIDGQG  LW+CK SG+SCP+GA SL+I D++NVN+ GLSS+NSQMFNIVV GCQNV + GV+VSSA DSPNTDGIH
Subjt:  QVLAQSQAWIAFRHINGLSIYGGVIDGQGMGLWNCKHSGQSCPDGATSLEIFDSQNVNVNGLSSVNSQMFNIVVYGCQNVQIQGVNVSSASDSPNTDGIH

Query:  VQQSLNVNISNSNIGTGDDCISIGPGTTNLWMENINCGPGHGI
        VQQS NV I NSNIGTGDDCISIGPGT+NLWMENI CGPGHGI
Subjt:  VQQSLNVNISNSNIGTGDDCISIGPGTTNLWMENINCGPGHGI

SwissProt top hitse value%identityAlignment
O22818 Probable polygalacturonase At2g438609.6e-5849.57Show/hide
Query:  FLLFLFLNHGLAAGSTFNIVSLGAKADGMTDASPAFQEAWANACGSSEPATIYVPNGAFYVHSGNFTG-PCKNNAITVLINGTLMASSNIQVLAQSQAWI
        F L   L H +   ST N++S GAK DG  D++ AF  AW  AC S+ P TI VP G F V +  F G  CK   I++ I G+++A  + +++A S+ WI
Subjt:  FLLFLFLNHGLAAGSTFNIVSLGAKADGMTDASPAFQEAWANACGSSEPATIYVPNGAFYVHSGNFTG-PCKNNAITVLINGTLMASSNIQVLAQSQAWI

Query:  AFRHINGLSIYGGVIDGQGMGLWNCKHS-GQSCPDGATSLEIFDSQNVNVNGLSSVNSQMFNIVVYGCQNVQIQGVNVSSASDSPNTDGIHVQQSLNVNI
         F  +  +SIYGG++D QG  LW CK++ G +CP GA SL    S N+ ++GL+S+NSQ F+IV+    NV I GV VS+  +SPNTDGIHV+ S +V+I
Subjt:  AFRHINGLSIYGGVIDGQGMGLWNCKHS-GQSCPDGATSLEIFDSQNVNVNGLSSVNSQMFNIVVYGCQNVQIQGVNVSSASDSPNTDGIHVQQSLNVNI

Query:  SNSNIGTGDDCISIGPGTTNLWMENINCGPGHGI
        +NS IGTGDDCISIGPG+TN++++ I CGPGHGI
Subjt:  SNSNIGTGDDCISIGPGTTNLWMENINCGPGHGI

P26216 Exopolygalacturonase1.9e-4240.08Show/hide
Query:  LHLLFLLFLF-LNHG------------LAAGSTFNIVSLGAKADGMTDASPAFQEAWANACGSSEPATIYVPNGAFYVHSGNFTGPCKNNAITVLINGTL
        +  LFLL LF + HG               G +F+I  LGA  +G TD++ A QEAWA+ACG +   TI +P G F V   NFTGPCK + +T+ ++G L
Subjt:  LHLLFLLFLF-LNHG------------LAAGSTFNIVSLGAKADGMTDASPAFQEAWANACGSSEPATIYVPNGAFYVHSGNFTGPCKNNAITVLINGTL

Query:  MASSNIQVLAQSQAWIAFRHINGLSIYG-GVIDGQGMGLW--NCKHSGQSCPDGATSLEIFDSQNVNVNGLSSVNSQMFNIVVYGCQNVQIQGVNVSSAS
        +A++++        WI    ++ L I G G +DGQG  +W  N       C     SL +    N  V+G++ +NS+ F++ +Y C+++ I+ V V++  
Subjt:  MASSNIQVLAQSQAWIAFRHINGLSIYG-GVIDGQGMGLW--NCKHSGQSCPDGATSLEIFDSQNVNVNGLSSVNSQMFNIVVYGCQNVQIQGVNVSSAS

Query:  DSPNTDGIHVQQSLNVNISNSNIGTGDDCISIGPGTTNLWMENINCGPGHGI
        DSPNTDGIH+  S  + I+N+ IG GDDCISIGPGT+ + +  + CGPGHGI
Subjt:  DSPNTDGIHVQQSLNVNISNSNIGTGDDCISIGPGTTNLWMENINCGPGHGI

P35338 Exopolygalacturonase3.0e-4340.48Show/hide
Query:  LHLLFLLFLF-LNHG------------LAAGSTFNIVSLGAKADGMTDASPAFQEAWANACGSSEPATIYVPNGAFYVHSGNFTGPCKNNAITVLINGTL
        +  LFLL LF + HG               G +F+I  LGA  +G TD++ A QEAWA+ACG +   TI +P G F V   NFTGPCK + +T+ ++G L
Subjt:  LHLLFLLFLF-LNHG------------LAAGSTFNIVSLGAKADGMTDASPAFQEAWANACGSSEPATIYVPNGAFYVHSGNFTGPCKNNAITVLINGTL

Query:  MASSNIQVLAQSQAWIAFRHINGLSIYG-GVIDGQGMGLW--NCKHSGQSCPDGATSLEIFDSQNVNVNGLSSVNSQMFNIVVYGCQNVQIQGVNVSSAS
        +A++++    +   WI    ++ L I G G +DGQG  +W  N       C     SL +    N  V+G++ +NS+ F++ +Y C+N+ I+ V V++  
Subjt:  MASSNIQVLAQSQAWIAFRHINGLSIYG-GVIDGQGMGLW--NCKHSGQSCPDGATSLEIFDSQNVNVNGLSSVNSQMFNIVVYGCQNVQIQGVNVSSAS

Query:  DSPNTDGIHVQQSLNVNISNSNIGTGDDCISIGPGTTNLWMENINCGPGHGI
        DSPNTDGIH+  S  + I+N+ IG GDDCISIGPGT+ + +  + CGPGHGI
Subjt:  DSPNTDGIHVQQSLNVNISNSNIGTGDDCISIGPGTTNLWMENINCGPGHGI

P35339 Exopolygalacturonase6.0e-4441.67Show/hide
Query:  LHLLFLLFLF-LNHGLAA------------GSTFNIVSLGAKADGMTDASPAFQEAWANACGSSEPATIYVPNGAFYVHSGNFTGPCKNNAITVLINGTL
        +  LFLL LF + HG  A            G +F+I  LGA  +G TD++ A QEAWA+ACG +   TI +P G F V   NFTGPCK + +T+ +NG L
Subjt:  LHLLFLLFLF-LNHGLAA------------GSTFNIVSLGAKADGMTDASPAFQEAWANACGSSEPATIYVPNGAFYVHSGNFTGPCKNNAITVLINGTL

Query:  MASSNIQVLAQSQAWIAFRHINGLSIYG-GVIDGQGMGLW--NCKHSGQSCPDGATSLEIFDSQNVNVNGLSSVNSQMFNIVVYGCQNVQIQGVNVSSAS
        +A++++        WI    ++ L I G G +DGQG  +W  N       C     SL +    N  V+G++ +NS+ F++ +Y C+++ I+ VNV++  
Subjt:  MASSNIQVLAQSQAWIAFRHINGLSIYG-GVIDGQGMGLW--NCKHSGQSCPDGATSLEIFDSQNVNVNGLSSVNSQMFNIVVYGCQNVQIQGVNVSSAS

Query:  DSPNTDGIHVQQSLNVNISNSNIGTGDDCISIGPGTTNLWMENINCGPGHGI
        DSPNTDGIH+  S  V I+N+ IG GDDCISIGPGT+ + +  + CGPGHGI
Subjt:  DSPNTDGIHVQQSLNVNISNSNIGTGDDCISIGPGTTNLWMENINCGPGHGI

P48979 Polygalacturonase4.7e-7357.32Show/hide
Query:  NLHLLFLLFLF-LNHGLAAGSTFNIVSLGAKADGMTDASPAFQEAWANACGSSEPATIYVPNGAFYVHSGNFTGPCKNNAITVLINGTLMASSNIQVLAQ
        +L  L L+F+F +N  +A+  T+N+ SLGAKADG TD++ AF  AWA AC S  P  IYVP G F++    F+GPCKNNAIT  I GTL+A S+ +V+  
Subjt:  NLHLLFLLFLF-LNHGLAAGSTFNIVSLGAKADGMTDASPAFQEAWANACGSSEPATIYVPNGAFYVHSGNFTGPCKNNAITVLINGTLMASSNIQVLAQ

Query:  SQAWIAFRHINGLSIYGGVIDGQGMGLWNCKH-SGQSCPDGATSLEIFDSQNVNVNGLSSVNSQMFNIVVYGCQNVQIQGVNVSSASDSPNTDGIHVQQS
        +  WI F H+NG++I GG++DGQG  LW CK   G+SCP GAT+L   DS N+ V+GL+S+NSQMF+IV+   QNVQ+QGV VS + +SPNTDGIHVQ S
Subjt:  SQAWIAFRHINGLSIYGGVIDGQGMGLWNCKH-SGQSCPDGATSLEIFDSQNVNVNGLSSVNSQMFNIVVYGCQNVQIQGVNVSSASDSPNTDGIHVQQS

Query:  LNVNISNSNIGTGDDCISIGPGTTNLWMENINCGPGHGI
          V I NS I TGDDC+SIGPGT+NLW+E + CGPGHGI
Subjt:  LNVNISNSNIGTGDDCISIGPGTTNLWMENINCGPGHGI

Arabidopsis top hitse value%identityAlignment
AT1G65570.1 Pectin lyase-like superfamily protein1.0e-5443.24Show/hide
Query:  AGSTFNIVSLGAKADGMTDASPAFQEAWANACGSSEPATIYVPNGAFYVHSG-NFTG-PCKNNAITVLINGTLMASSNIQVLAQSQAWIAFRHINGLSIY
        A ++ N++S GA  +G+ +++ AF +AW  ACG  +   IYVP G + V     F G  CK+  IT+ I+GTL+   +  +L + + W +F  ++ +++ 
Subjt:  AGSTFNIVSLGAKADGMTDASPAFQEAWANACGSSEPATIYVPNGAFYVHSG-NFTG-PCKNNAITVLINGTLMASSNIQVLAQSQAWIAFRHINGLSIY

Query:  GGVIDGQGMGLWNCKHSGQSCPDGATSLEIFDSQNVNVNGLSSVNSQMFNIVVYGCQNVQIQGVNVSSASDSPNTDGIHVQQSLNVNISNSNIGTGDDCI
        GG  D +G  LW+CK +G +CP+GAT+L   DS NV + G+ S+NSQ+F+I +  C+N++I+ V + +  +SPNTDGIH+Q S ++ + N++I TGDDCI
Subjt:  GGVIDGQGMGLWNCKHSGQSCPDGATSLEIFDSQNVNVNGLSSVNSQMFNIVVYGCQNVQIQGVNVSSASDSPNTDGIHVQQSLNVNISNSNIGTGDDCI

Query:  SIGPGTTNLWMENINCGPGHGI
        SIGPGT NL ++ I CGPGHGI
Subjt:  SIGPGTTNLWMENINCGPGHGI

AT2G43860.1 Pectin lyase-like superfamily protein6.8e-5949.57Show/hide
Query:  FLLFLFLNHGLAAGSTFNIVSLGAKADGMTDASPAFQEAWANACGSSEPATIYVPNGAFYVHSGNFTG-PCKNNAITVLINGTLMASSNIQVLAQSQAWI
        F L   L H +   ST N++S GAK DG  D++ AF  AW  AC S+ P TI VP G F V +  F G  CK   I++ I G+++A  + +++A S+ WI
Subjt:  FLLFLFLNHGLAAGSTFNIVSLGAKADGMTDASPAFQEAWANACGSSEPATIYVPNGAFYVHSGNFTG-PCKNNAITVLINGTLMASSNIQVLAQSQAWI

Query:  AFRHINGLSIYGGVIDGQGMGLWNCKHS-GQSCPDGATSLEIFDSQNVNVNGLSSVNSQMFNIVVYGCQNVQIQGVNVSSASDSPNTDGIHVQQSLNVNI
         F  +  +SIYGG++D QG  LW CK++ G +CP GA SL    S N+ ++GL+S+NSQ F+IV+    NV I GV VS+  +SPNTDGIHV+ S +V+I
Subjt:  AFRHINGLSIYGGVIDGQGMGLWNCKHS-GQSCPDGATSLEIFDSQNVNVNGLSSVNSQMFNIVVYGCQNVQIQGVNVSSASDSPNTDGIHVQQSLNVNI

Query:  SNSNIGTGDDCISIGPGTTNLWMENINCGPGHGI
        +NS IGTGDDCISIGPG+TN++++ I CGPGHGI
Subjt:  SNSNIGTGDDCISIGPGTTNLWMENINCGPGHGI

AT2G43870.1 Pectin lyase-like superfamily protein9.5e-6951.71Show/hide
Query:  LFLLFLFLNHGLAAGSTFNIVSLGAKADGMTDASPAFQEAWANACGSSEPATIYVPNGAFYVHSGNFTG-PCKNNAITVLINGTLMASSNIQVLAQSQAW
        L +LF+F      +  ++N++S GAK DG TDA+ AF   W  AC SS P TI VP G F + S  F G  CK   +T  I+GTL+A ++ +V+     W
Subjt:  LFLLFLFLNHGLAAGSTFNIVSLGAKADGMTDASPAFQEAWANACGSSEPATIYVPNGAFYVHSGNFTG-PCKNNAITVLINGTLMASSNIQVLAQSQAW

Query:  IAFRHINGLSIYGGVIDGQGMGLWNCKHSGQSCPDGATSLEIFDSQNVNVNGLSSVNSQMFNIVVYGCQNVQIQGVNVSSASDSPNTDGIHVQQSLNVNI
        I F+H++G+++YGGV+D +G  LW+CK SG++CP GAT++    S NV V+GL+S+NSQMF++V+ GC NV++QGV V +A +SPNTDGIHVQ S +V+I
Subjt:  IAFRHINGLSIYGGVIDGQGMGLWNCKHSGQSCPDGATSLEIFDSQNVNVNGLSSVNSQMFNIVVYGCQNVQIQGVNVSSASDSPNTDGIHVQQSLNVNI

Query:  SNSNIGTGDDCISIGPGTTNLWMENINCGPGHGI
         N+ I TGDDC+SIGPGT  LW+EN+ CGPGHGI
Subjt:  SNSNIGTGDDCISIGPGTTNLWMENINCGPGHGI

AT2G43880.1 Pectin lyase-like superfamily protein4.6e-5546.7Show/hide
Query:  FLNHGLAAGSTFNIVSLGAKADGMTDASPAFQEAWANACGSSEPATIYVPNGAFYVHSGNFTGPCKNNAITVLINGTLMASSNIQVLAQSQAWIAFRHIN
        FL     A  +FN+   GA+ DG  DA+ +F  AW+ ACGS   A +YVP G + V +  F GPCK N IT   +GTL+A +N   +  S  WI F  +N
Subjt:  FLNHGLAAGSTFNIVSLGAKADGMTDASPAFQEAWANACGSSEPATIYVPNGAFYVHSGNFTGPCKNNAITVLINGTLMASSNIQVLAQSQAWIAFRHIN

Query:  GLSIYGGVIDGQGMGLWNCKHSGQSCPDGATSLEIFDSQNVNVNGLSSVNSQMFNIVVYGCQNVQIQGVNVSSASDSPNTDGIHVQQSLNVNISNSNIGT
         +S+YGG ID +G G W+C+  G  CP GA S+      NV ++GLSS NSQ  ++ V+   NV+I+ V + + S SPNTDGIHVQ S  V IS   I T
Subjt:  GLSIYGGVIDGQGMGLWNCKHSGQSCPDGATSLEIFDSQNVNVNGLSSVNSQMFNIVVYGCQNVQIQGVNVSSASDSPNTDGIHVQQSLNVNISNSNIGT

Query:  GDDCISIGPGTTNLWMENINCGPGHGI
        GDDCI++  G+ N+W+E +NCGPGHGI
Subjt:  GDDCISIGPGTTNLWMENINCGPGHGI

AT3G59850.1 Pectin lyase-like superfamily protein3.3e-6952.77Show/hide
Query:  LLFLLFLFLNHGLAAGSTFNIVSLGAKADGMTDASPAFQEAWANACGSSEPATIYVPNGAFYVHSGNFTG-PCKNNAITVLINGTLMASSNIQVLAQSQA
        LL +L   L+   ++  T+NI+S GAK DG TD++ AF   WA AC S +P TI VP G F + S  F G  CK  ++T  I GTL+A S+ +V+ +   
Subjt:  LLFLLFLFLNHGLAAGSTFNIVSLGAKADGMTDASPAFQEAWANACGSSEPATIYVPNGAFYVHSGNFTG-PCKNNAITVLINGTLMASSNIQVLAQSQA

Query:  WIAFRHINGLSIYGGVIDGQGMGLWNCKHSGQSCPDGATSLEIFDSQNVNVNGLSSVNSQMFNIVVYGCQNVQIQGVNVSSASDSPNTDGIHVQQSLNVN
        WI F+H++G+S+YGGV+D QG  LW+CK SG++CP GATS+    S+NV ++GL+S+NSQMF++ + GC NV++ GV VS+  +SPNTDGIHVQ S  V+
Subjt:  WIAFRHINGLSIYGGVIDGQGMGLWNCKHSGQSCPDGATSLEIFDSQNVNVNGLSSVNSQMFNIVVYGCQNVQIQGVNVSSASDSPNTDGIHVQQSLNVN

Query:  ISNSNIGTGDDCISIGPGTTNLWMENINCGPGHGI
        I NS I TGDDC+SIGPGT  LW+EN+ CGPGHGI
Subjt:  ISNSNIGTGDDCISIGPGTTNLWMENINCGPGHGI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTCTAGTTGGAAACTTACACCTTCTTTTCCTTCTTTTTCTATTTCTTAACCACGGTTTGGCTGCTGGATCGACATTCAACATCGTTAGTCTTGGAGCCAAAGCCGA
TGGCATGACGGACGCCTCACCAGCATTTCAAGAGGCATGGGCAAATGCCTGCGGCTCGTCAGAACCGGCCACCATTTACGTGCCGAACGGTGCATTCTACGTTCATAGTG
GGAACTTTACTGGACCTTGTAAGAACAATGCTATTACTGTTCTCATCAATGGTACTCTTATGGCTTCTTCAAATATTCAAGTTTTAGCTCAATCTCAAGCTTGGATAGCC
TTTAGACACATAAATGGGCTTTCCATCTATGGAGGTGTTATTGATGGTCAAGGAATGGGGTTATGGAATTGTAAGCATTCAGGACAGAGTTGCCCTGATGGAGCCACGAG
CCTTGAAATCTTCGACTCACAAAATGTAAATGTAAATGGATTATCTTCGGTTAATAGCCAAATGTTCAATATTGTGGTGTATGGTTGTCAAAATGTACAAATCCAAGGAG
TGAATGTCTCGTCTGCCAGCGATAGTCCAAACACTGATGGTATCCATGTCCAACAATCATTGAACGTGAACATATCGAACTCAAACATTGGCACTGGTGACGACTGCATT
TCAATTGGTCCAGGAACTACCAACTTATGGATGGAAAATATTAATTGTGGACCCGGACATGGAATCAGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGCCTCTAGTTGGAAACTTACACCTTCTTTTCCTTCTTTTTCTATTTCTTAACCACGGTTTGGCTGCTGGATCGACATTCAACATCGTTAGTCTTGGAGCCAAAGCCGA
TGGCATGACGGACGCCTCACCAGCATTTCAAGAGGCATGGGCAAATGCCTGCGGCTCGTCAGAACCGGCCACCATTTACGTGCCGAACGGTGCATTCTACGTTCATAGTG
GGAACTTTACTGGACCTTGTAAGAACAATGCTATTACTGTTCTCATCAATGGTACTCTTATGGCTTCTTCAAATATTCAAGTTTTAGCTCAATCTCAAGCTTGGATAGCC
TTTAGACACATAAATGGGCTTTCCATCTATGGAGGTGTTATTGATGGTCAAGGAATGGGGTTATGGAATTGTAAGCATTCAGGACAGAGTTGCCCTGATGGAGCCACGAG
CCTTGAAATCTTCGACTCACAAAATGTAAATGTAAATGGATTATCTTCGGTTAATAGCCAAATGTTCAATATTGTGGTGTATGGTTGTCAAAATGTACAAATCCAAGGAG
TGAATGTCTCGTCTGCCAGCGATAGTCCAAACACTGATGGTATCCATGTCCAACAATCATTGAACGTGAACATATCGAACTCAAACATTGGCACTGGTGACGACTGCATT
TCAATTGGTCCAGGAACTACCAACTTATGGATGGAAAATATTAATTGTGGACCCGGACATGGAATCAGGTAA
Protein sequenceShow/hide protein sequence
MPLVGNLHLLFLLFLFLNHGLAAGSTFNIVSLGAKADGMTDASPAFQEAWANACGSSEPATIYVPNGAFYVHSGNFTGPCKNNAITVLINGTLMASSNIQVLAQSQAWIA
FRHINGLSIYGGVIDGQGMGLWNCKHSGQSCPDGATSLEIFDSQNVNVNGLSSVNSQMFNIVVYGCQNVQIQGVNVSSASDSPNTDGIHVQQSLNVNISNSNIGTGDDCI
SIGPGTTNLWMENINCGPGHGIR