| GenBank top hits | e value | %identity | Alignment |
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| KAA0037906.1 reverse transcriptase [Cucumis melo var. makuwa] | 9.8e-51 | 79.69 | Show/hide |
Query: MRFCIGYRVLNKVIVKNRYPLPKIDDLFDHLQGAIVFSKIDLRSEYHQLRIKDSDVSKTAFCSRYGQYEFIVMSFGLTNAPTVFVDLMNSVFKDFLDIFV
MR CI YR LNKV VKNRYPLPKIDDLFD LQGA VFSKIDLRS YHQLRI+D D+ KTAFCSRYG YEF+VMSFGLTNAP VF+DLMN VFKDFLD FV
Subjt: MRFCIGYRVLNKVIVKNRYPLPKIDDLFDHLQGAIVFSKIDLRSEYHQLRIKDSDVSKTAFCSRYGQYEFIVMSFGLTNAPTVFVDLMNSVFKDFLDIFV
Query: MVFINDILVYSKTKIGHEKQLHIVLETL
+VFI+DIL+YSKT+ HE+ LH VLETL
Subjt: MVFINDILVYSKTKIGHEKQLHIVLETL
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| KAA0045329.1 pol protein [Cucumis melo var. makuwa] | 2.2e-50 | 78.91 | Show/hide |
Query: MRFCIGYRVLNKVIVKNRYPLPKIDDLFDHLQGAIVFSKIDLRSEYHQLRIKDSDVSKTAFCSRYGQYEFIVMSFGLTNAPTVFVDLMNSVFKDFLDIFV
MR CI YR LNKV VKNRYPLP+IDDLFD LQGA VFSKIDLRS YHQLRIKD DV KTAFCSRYGQYEFIVM FGLTNAPTVF+DLMN VF++FLD FV
Subjt: MRFCIGYRVLNKVIVKNRYPLPKIDDLFDHLQGAIVFSKIDLRSEYHQLRIKDSDVSKTAFCSRYGQYEFIVMSFGLTNAPTVFVDLMNSVFKDFLDIFV
Query: MVFINDILVYSKTKIGHEKQLHIVLETL
++FI+DIL+YSKT+ HE+ LH+VL+TL
Subjt: MVFINDILVYSKTKIGHEKQLHIVLETL
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| KAA0047209.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] | 9.8e-51 | 80.47 | Show/hide |
Query: MRFCIGYRVLNKVIVKNRYPLPKIDDLFDHLQGAIVFSKIDLRSEYHQLRIKDSDVSKTAFCSRYGQYEFIVMSFGLTNAPTVFVDLMNSVFKDFLDIFV
MR CI YR LNKV VKNRYPLP+IDDLFD LQGA VFSKIDLRS YHQLRIKD DV KTAFCSRYG YEFIVMSFGLTNAP VF+DLMN VF++FLD FV
Subjt: MRFCIGYRVLNKVIVKNRYPLPKIDDLFDHLQGAIVFSKIDLRSEYHQLRIKDSDVSKTAFCSRYGQYEFIVMSFGLTNAPTVFVDLMNSVFKDFLDIFV
Query: MVFINDILVYSKTKIGHEKQLHIVLETL
+VFI+DIL+YSKTK HEK L IVL+TL
Subjt: MVFINDILVYSKTKIGHEKQLHIVLETL
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| KAA0051925.1 pol protein [Cucumis melo var. makuwa] | 2.6e-51 | 80.47 | Show/hide |
Query: MRFCIGYRVLNKVIVKNRYPLPKIDDLFDHLQGAIVFSKIDLRSEYHQLRIKDSDVSKTAFCSRYGQYEFIVMSFGLTNAPTVFVDLMNSVFKDFLDIFV
MR CI YR LNKV VKNRYPLP+IDDLFD LQGA VFSKIDLRS YHQLRI+DS++ KTAFCSRYG YEFIVMSFGLTNAP VF+DLMN VFKDFLD FV
Subjt: MRFCIGYRVLNKVIVKNRYPLPKIDDLFDHLQGAIVFSKIDLRSEYHQLRIKDSDVSKTAFCSRYGQYEFIVMSFGLTNAPTVFVDLMNSVFKDFLDIFV
Query: MVFINDILVYSKTKIGHEKQLHIVLETL
+VFI+DIL+YSKT++ HEK LH VLETL
Subjt: MVFINDILVYSKTKIGHEKQLHIVLETL
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| TYK12237.1 pol protein [Cucumis melo var. makuwa] | 2.6e-51 | 80.47 | Show/hide |
Query: MRFCIGYRVLNKVIVKNRYPLPKIDDLFDHLQGAIVFSKIDLRSEYHQLRIKDSDVSKTAFCSRYGQYEFIVMSFGLTNAPTVFVDLMNSVFKDFLDIFV
MR CI YR LNKV VKNRYPLP+IDDLFD LQGA VFSKIDLRS YHQLRI+DS++ KTAFCSRYG YEFIVMSFGLTNAP VF+DLMN VFKDFLD FV
Subjt: MRFCIGYRVLNKVIVKNRYPLPKIDDLFDHLQGAIVFSKIDLRSEYHQLRIKDSDVSKTAFCSRYGQYEFIVMSFGLTNAPTVFVDLMNSVFKDFLDIFV
Query: MVFINDILVYSKTKIGHEKQLHIVLETL
+VFI+DIL+YSKT++ HEK LH VLETL
Subjt: MVFINDILVYSKTKIGHEKQLHIVLETL
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7T6U3 Reverse transcriptase | 4.7e-51 | 79.69 | Show/hide |
Query: MRFCIGYRVLNKVIVKNRYPLPKIDDLFDHLQGAIVFSKIDLRSEYHQLRIKDSDVSKTAFCSRYGQYEFIVMSFGLTNAPTVFVDLMNSVFKDFLDIFV
MR CI YR LNKV VKNRYPLPKIDDLFD LQGA VFSKIDLRS YHQLRI+D D+ KTAFCSRYG YEF+VMSFGLTNAP VF+DLMN VFKDFLD FV
Subjt: MRFCIGYRVLNKVIVKNRYPLPKIDDLFDHLQGAIVFSKIDLRSEYHQLRIKDSDVSKTAFCSRYGQYEFIVMSFGLTNAPTVFVDLMNSVFKDFLDIFV
Query: MVFINDILVYSKTKIGHEKQLHIVLETL
+VFI+DIL+YSKT+ HE+ LH VLETL
Subjt: MVFINDILVYSKTKIGHEKQLHIVLETL
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| A0A5A7TVQ8 Reverse transcriptase | 1.1e-50 | 78.91 | Show/hide |
Query: MRFCIGYRVLNKVIVKNRYPLPKIDDLFDHLQGAIVFSKIDLRSEYHQLRIKDSDVSKTAFCSRYGQYEFIVMSFGLTNAPTVFVDLMNSVFKDFLDIFV
MR CI YR LNKV VKNRYPLP+IDDLFD LQGA VFSKIDLRS YHQLRIKD DV KTAFCSRYGQYEFIVM FGLTNAPTVF+DLMN VF++FLD FV
Subjt: MRFCIGYRVLNKVIVKNRYPLPKIDDLFDHLQGAIVFSKIDLRSEYHQLRIKDSDVSKTAFCSRYGQYEFIVMSFGLTNAPTVFVDLMNSVFKDFLDIFV
Query: MVFINDILVYSKTKIGHEKQLHIVLETL
++FI+DIL+YSKT+ HE+ LH+VL+TL
Subjt: MVFINDILVYSKTKIGHEKQLHIVLETL
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| A0A5A7U149 Reverse transcriptase | 4.7e-51 | 80.47 | Show/hide |
Query: MRFCIGYRVLNKVIVKNRYPLPKIDDLFDHLQGAIVFSKIDLRSEYHQLRIKDSDVSKTAFCSRYGQYEFIVMSFGLTNAPTVFVDLMNSVFKDFLDIFV
MR CI YR LNKV VKNRYPLP+IDDLFD LQGA VFSKIDLRS YHQLRIKD DV KTAFCSRYG YEFIVMSFGLTNAP VF+DLMN VF++FLD FV
Subjt: MRFCIGYRVLNKVIVKNRYPLPKIDDLFDHLQGAIVFSKIDLRSEYHQLRIKDSDVSKTAFCSRYGQYEFIVMSFGLTNAPTVFVDLMNSVFKDFLDIFV
Query: MVFINDILVYSKTKIGHEKQLHIVLETL
+VFI+DIL+YSKTK HEK L IVL+TL
Subjt: MVFINDILVYSKTKIGHEKQLHIVLETL
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| A0A5A7UDZ3 Reverse transcriptase | 1.2e-51 | 80.47 | Show/hide |
Query: MRFCIGYRVLNKVIVKNRYPLPKIDDLFDHLQGAIVFSKIDLRSEYHQLRIKDSDVSKTAFCSRYGQYEFIVMSFGLTNAPTVFVDLMNSVFKDFLDIFV
MR CI YR LNKV VKNRYPLP+IDDLFD LQGA VFSKIDLRS YHQLRI+DS++ KTAFCSRYG YEFIVMSFGLTNAP VF+DLMN VFKDFLD FV
Subjt: MRFCIGYRVLNKVIVKNRYPLPKIDDLFDHLQGAIVFSKIDLRSEYHQLRIKDSDVSKTAFCSRYGQYEFIVMSFGLTNAPTVFVDLMNSVFKDFLDIFV
Query: MVFINDILVYSKTKIGHEKQLHIVLETL
+VFI+DIL+YSKT++ HEK LH VLETL
Subjt: MVFINDILVYSKTKIGHEKQLHIVLETL
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| A0A5D3CJW2 Reverse transcriptase | 1.2e-51 | 80.47 | Show/hide |
Query: MRFCIGYRVLNKVIVKNRYPLPKIDDLFDHLQGAIVFSKIDLRSEYHQLRIKDSDVSKTAFCSRYGQYEFIVMSFGLTNAPTVFVDLMNSVFKDFLDIFV
MR CI YR LNKV VKNRYPLP+IDDLFD LQGA VFSKIDLRS YHQLRI+DS++ KTAFCSRYG YEFIVMSFGLTNAP VF+DLMN VFKDFLD FV
Subjt: MRFCIGYRVLNKVIVKNRYPLPKIDDLFDHLQGAIVFSKIDLRSEYHQLRIKDSDVSKTAFCSRYGQYEFIVMSFGLTNAPTVFVDLMNSVFKDFLDIFV
Query: MVFINDILVYSKTKIGHEKQLHIVLETL
+VFI+DIL+YSKT++ HEK LH VLETL
Subjt: MVFINDILVYSKTKIGHEKQLHIVLETL
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04323 Retrovirus-related Pol polyprotein from transposon 17.6 | 1.9e-20 | 37.8 | Show/hide |
Query: RFCIGYRVLNKVIVKNRYPLPKIDDLFDHLQGAIVFSKIDLRSEYHQLRIKDSDVSKTAFCSRYGQYEFIVMSFGLTNAPTVFVDLMNSVFKDFLDIFVM
R I YR LN++ V +R+P+P +D++ L F+ IDL +HQ+ + VSKTAF +++G YE++ M FGL NAP F MN + + L+ +
Subjt: RFCIGYRVLNKVIVKNRYPLPKIDDLFDHLQGAIVFSKIDLRSEYHQLRIKDSDVSKTAFCSRYGQYEFIVMSFGLTNAPTVFVDLMNSVFKDFLDIFVM
Query: VFINDILVYSKTKIGHEKQLHIVLETL
V+++DI+V+S + H + L +V E L
Subjt: VFINDILVYSKTKIGHEKQLHIVLETL
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| P0CT41 Transposon Tf2-12 polyprotein | 2.4e-20 | 35.94 | Show/hide |
Query: MRFCIGYRVLNKVIVKNRYPLPKIDDLFDHLQGAIVFSKIDLRSEYHQLRIKDSDVSKTAFCSRYGQYEFIVMSFGLTNAPTVFVDLMNSVFKDFLDIFV
+R + Y+ LNK + N YPLP I+ L +QG+ +F+K+DL+S YH +R++ D K AF G +E++VM +G++ AP F +N++ + + V
Subjt: MRFCIGYRVLNKVIVKNRYPLPKIDDLFDHLQGAIVFSKIDLRSEYHQLRIKDSDVSKTAFCSRYGQYEFIVMSFGLTNAPTVFVDLMNSVFKDFLDIFV
Query: MVFINDILVYSKTKIGHEKQLHIVLETL
+ +++DIL++SK++ H K + VL+ L
Subjt: MVFINDILVYSKTKIGHEKQLHIVLETL
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| P31843 RNA-directed DNA polymerase homolog | 1.7e-29 | 50 | Show/hide |
Query: MRFCIGYRVLNKVIVKNRYPLPKIDDLFDHLQGAIVFSKIDLRSEYHQLRIKDSDVSKTAFCSRYGQYEFIVMSFGLTNAPTVFVDLMNSVFKDFLDIFV
+R CI YR L KV +KN+YP+P++DDLFD L A F+K+DLRS Y Q+RI D KT +RYG +EF VM FGLTNA F +LMN+V ++LD FV
Subjt: MRFCIGYRVLNKVIVKNRYPLPKIDDLFDHLQGAIVFSKIDLRSEYHQLRIKDSDVSKTAFCSRYGQYEFIVMSFGLTNAPTVFVDLMNSVFKDFLDIFV
Query: MVFINDILV---YSKTKIGHEKQLHIVLET
+V+++D++V YS + H K L +V E+
Subjt: MVFINDILV---YSKTKIGHEKQLHIVLET
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| Q7LHG5 Transposon Ty3-I Gag-Pol polyprotein | 6.2e-24 | 43.31 | Show/hide |
Query: RFCIGYRVLNKVIVKNRYPLPKIDDLFDHLQGAIVFSKIDLRSEYHQLRIKDSDVSKTAFCSRYGQYEFIVMSFGLTNAPTVFVDLMNSVFKDFLDIFVM
R C+ YR LNK + + +PLP+ID+L + A +F+ +DL S YHQ+ ++ D KTAF + G+YE+ VM FGL NAP+ F M F+D FV
Subjt: RFCIGYRVLNKVIVKNRYPLPKIDDLFDHLQGAIVFSKIDLRSEYHQLRIKDSDVSKTAFCSRYGQYEFIVMSFGLTNAPTVFVDLMNSVFKDFLDIFVM
Query: VFINDILVYSKTKIGHEKQLHIVLETL
V+++DIL++S++ H K L VLE L
Subjt: VFINDILVYSKTKIGHEKQLHIVLETL
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| Q99315 Transposon Ty3-G Gag-Pol polyprotein | 6.2e-24 | 43.31 | Show/hide |
Query: RFCIGYRVLNKVIVKNRYPLPKIDDLFDHLQGAIVFSKIDLRSEYHQLRIKDSDVSKTAFCSRYGQYEFIVMSFGLTNAPTVFVDLMNSVFKDFLDIFVM
R C+ YR LNK + + +PLP+ID+L + A +F+ +DL S YHQ+ ++ D KTAF + G+YE+ VM FGL NAP+ F M F+D FV
Subjt: RFCIGYRVLNKVIVKNRYPLPKIDDLFDHLQGAIVFSKIDLRSEYHQLRIKDSDVSKTAFCSRYGQYEFIVMSFGLTNAPTVFVDLMNSVFKDFLDIFVM
Query: VFINDILVYSKTKIGHEKQLHIVLETL
V+++DIL++S++ H K L VLE L
Subjt: VFINDILVYSKTKIGHEKQLHIVLETL
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