; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc09g0247701 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc09g0247701
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionrRNA 2'-O-methyltransferase fibrillarin 2
Genome locationCMiso1.1chr09:12755718..12755927
RNA-Seq ExpressionCmc09g0247701
SyntenyCmc09g0247701
Gene Ontology termsGO:0000494 - box C/D snoRNA 3'-end processing (biological process)
GO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0031167 - rRNA methylation (biological process)
GO:1990258 - histone glutamine methylation (biological process)
GO:0005730 - nucleolus (cellular component)
GO:0016020 - membrane (cellular component)
GO:0031428 - box C/D snoRNP complex (cellular component)
GO:0032040 - small-subunit processome (cellular component)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
GO:0003723 - RNA binding (molecular function)
GO:0008649 - rRNA methyltransferase activity (molecular function)
GO:1990259 - histone-glutamine methyltransferase activity (molecular function)
InterPro domainsIPR000692 - Fibrillarin
IPR029063 - S-adenosyl-L-methionine-dependent methyltransferase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046576.1 putative fibrillarin [Cucumis melo var. makuwa]3.0e-30100Show/hide
Query:  MAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQVHLFCFFWMVLLFLYVRSATFVETDGMAL
        MAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQVHLFCFFWMVLLFLYVRSATFVETDGMAL
Subjt:  MAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQVHLFCFFWMVLLFLYVRSATFVETDGMAL

KAF9832386.1 hypothetical protein H0E87_001609 [Populus deltoides]2.3e-1488Show/hide
Query:  MAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQVHLFCFFWMV
        MAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQV  F F ++V
Subjt:  MAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQVHLFCFFWMV

KAG7549708.1 S-adenosyl-L-methionine-dependent methyltransferase [Arabidopsis thaliana x Arabidopsis arenosa]6.1e-1597.78Show/hide
Query:  MAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQVHLFC
        MAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQV LFC
Subjt:  MAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQVHLFC

MBA0645844.1 hypothetical protein [Gossypium klotzschianum]3.0e-1484.62Show/hide
Query:  MAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQVHLFCFFWMVLL
        MAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQV   C F  + L
Subjt:  MAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQVHLFCFFWMVLL

MBA0854225.1 hypothetical protein [Gossypium schwendimanii]3.0e-1484.62Show/hide
Query:  MAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQVHLFCFFWMVLL
        MAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQV   C F  + L
Subjt:  MAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQVHLFCFFWMVLL

TrEMBL top hitse value%identityAlignment
A0A2P2LHY6 Mediator of RNA polymerase II transcription subunit 36a1.0e-1585.19Show/hide
Query:  MAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQVHLFCFFWMVLLFL
        MAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQV LF FF+   L +
Subjt:  MAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQVHLFCFFWMVLLFL

A0A2P2LHZ4 Mediator of RNA polymerase II transcription subunit 36a8.6e-1593.62Show/hide
Query:  MAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQVHLFCFF
        MAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQV L  FF
Subjt:  MAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQVHLFCFF

A0A5A7TX71 Putative fibrillarin1.5e-30100Show/hide
Query:  MAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQVHLFCFFWMVLLFLYVRSATFVETDGMAL
        MAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQVHLFCFFWMVLLFLYVRSATFVETDGMAL
Subjt:  MAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQVHLFCFFWMVLLFLYVRSATFVETDGMAL

A0A7J8U6H4 Uncharacterized protein (Fragment)1.5e-1484.62Show/hide
Query:  MAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQVHLFCFFWMVLL
        MAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQV   C F  + L
Subjt:  MAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQVHLFCFFWMVLL

A0A7J9L5Z5 Uncharacterized protein (Fragment)1.5e-1484.62Show/hide
Query:  MAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQVHLFCFFWMVLL
        MAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQV   C F  + L
Subjt:  MAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQVHLFCFFWMVLL

SwissProt top hitse value%identityAlignment
A6NHQ2 rRNA/tRNA 2'-O-methyltransferase fibrillarin-like protein 17.0e-1482.5Show/hide
Query:  MAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQ
        +AKKRTN+IP++EDARHP KYRML+GMVDVIF+DVAQPDQ
Subjt:  MAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQ

Q55CW0 rRNA 2'-O-methyltransferase fibrillarin3.1e-1481.4Show/hide
Query:  MAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQVHL
        MAKKRTNVIPIIEDARHP KYRML+GMVDV+F+DVAQP+Q  +
Subjt:  MAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQVHL

Q80WS3 rRNA/tRNA 2'-O-methyltransferase fibrillarin-like protein 17.0e-1482.5Show/hide
Query:  MAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQ
        +AKKRTN+IP++EDARHP KYRML+GMVDVIF+DVAQPDQ
Subjt:  MAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQ

Q94AH9 rRNA 2'-O-methyltransferase fibrillarin 25.7e-1693.02Show/hide
Query:  MAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQVHL
        MAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQ  +
Subjt:  MAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQVHL

Q9FEF8 rRNA 2'-O-methyltransferase fibrillarin 15.7e-1693.02Show/hide
Query:  MAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQVHL
        MAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQ  +
Subjt:  MAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQVHL

Arabidopsis top hitse value%identityAlignment
AT4G25630.1 fibrillarin 24.1e-1793.02Show/hide
Query:  MAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQVHL
        MAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQ  +
Subjt:  MAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQVHL

AT5G52470.1 fibrillarin 14.1e-1793.02Show/hide
Query:  MAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQVHL
        MAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQ  +
Subjt:  MAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQVHL

AT5G52470.2 fibrillarin 15.3e-17100Show/hide
Query:  MAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQ
        MAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQ
Subjt:  MAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQ

AT5G52490.1 Fibrillarin family protein6.5e-1581.4Show/hide
Query:  MAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQVHL
        MA+KRTNVIPIIEDARHPAKYRMLVGMVD+IFSDV  P+Q ++
Subjt:  MAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQVHL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAAGAAGCGCACTAATGTTATACCCATCATTGAAGATGCCAGACACCCAGCCAAGTACCGGATGTTGGTTGGCATGGTGGATGTAATATTCTCTGATGTTGCTCA
GCCAGATCAGGTTCACCTCTTTTGCTTCTTCTGGATGGTCTTATTATTTCTGTATGTTAGAAGCGCCACTTTTGTTGAAACTGATGGCATGGCTCTATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAAAGAAGCGCACTAATGTTATACCCATCATTGAAGATGCCAGACACCCAGCCAAGTACCGGATGTTGGTTGGCATGGTGGATGTAATATTCTCTGATGTTGCTCA
GCCAGATCAGGTTCACCTCTTTTGCTTCTTCTGGATGGTCTTATTATTTCTGTATGTTAGAAGCGCCACTTTTGTTGAAACTGATGGCATGGCTCTATGA
Protein sequenceShow/hide protein sequence
MAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQVHLFCFFWMVLLFLYVRSATFVETDGMAL