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Cmc09g0248001 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc09g0248001
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionReverse transcriptase domain-containing protein
Genome locationCMiso1.1chr09:13204349..13204835
RNA-Seq ExpressionCmc09g0248001
SyntenyCmc09g0248001
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0026071.1 uncharacterized protein E6C27_scaffold581G00620 [Cucumis melo var. makuwa]4.8e-4362.73Show/hide
Query:  MFSIMINGSLEGFFHGRKGFKTGP---------------------PQSFQFHQRCEKVILTYLTFADDLMIFYVVDGSSLSFVRESLQKFGEFSGLFANL
        MF IMINGSLEGFFHGRKG + G                      PQSFQFH RCEKV LT+LTFADDLMIF   D  S+ F+R+ LQKFGE SGLFAN 
Subjt:  MFSIMINGSLEGFFHGRKGFKTGP---------------------PQSFQFHQRCEKVILTYLTFADDLMIFYVVDGSSLSFVRESLQKFGEFSGLFANL

Query:  GKSSIFVVRVSNKAASCLAASLGFVLENLPVHYLGLPLLSSRLHLNDCVPLIQRITSQIRS
         KSSIFV  V+N+ AS LA  +GF   NLPV YLGLPLL+ RL  NDC PLIQRITSQIRS
Subjt:  GKSSIFVVRVSNKAASCLAASLGFVLENLPVHYLGLPLLSSRLHLNDCVPLIQRITSQIRS

KAA0042317.1 non-LTR retroelement reverse transcriptase-like protein [Cucumis melo var. makuwa]8.8e-4564.6Show/hide
Query:  MFSIMINGSLEGFFHGRKGFKTG---------------------PPQSFQFHQRCEKVILTYLTFADDLMIFYVVDGSSLSFVRESLQKFGEFSGLFANL
        MFSIMINGSLEGFFHGRKG + G                     PPQ FQFHQ CEKV LT LTFADDLMIF V D  SLSFVRE+LQKFGE  GL+ANL
Subjt:  MFSIMINGSLEGFFHGRKGFKTG---------------------PPQSFQFHQRCEKVILTYLTFADDLMIFYVVDGSSLSFVRESLQKFGEFSGLFANL

Query:  GKSSIFVVRVSNKAASCLAASLGFVLENLPVHYLGLPLLSSRLHLNDCVPLIQRITSQIRS
        GK SIFV   +N+ AS LAA++GF+L NLPV YL LPLL+ RL  +DC PLIQRITS+IRS
Subjt:  GKSSIFVVRVSNKAASCLAASLGFVLENLPVHYLGLPLLSSRLHLNDCVPLIQRITSQIRS

KAA0062333.1 putative reverse transcriptase [Cucumis melo var. makuwa]9.7e-4463.35Show/hide
Query:  MFSIMINGSLEGFFHGRKGFKTGP---------------------PQSFQFHQRCEKVILTYLTFADDLMIFYVVDGSSLSFVRESLQKFGEFSGLFANL
        MFSIMINGSLEGFFHGRKG + G                      PQSF FH RCE V L +LTFADDLMIF   D SSL F+RE LQKFGE SGLF NL
Subjt:  MFSIMINGSLEGFFHGRKGFKTGP---------------------PQSFQFHQRCEKVILTYLTFADDLMIFYVVDGSSLSFVRESLQKFGEFSGLFANL

Query:  GKSSIFVVRVSNKAASCLAASLGFVLENLPVHYLGLPLLSSRLHLNDCVPLIQRITSQIRS
         K+S+FV  V+++ AS LAAS+GFVL NLPV YLGLPLLS RL  +DC PLIQRITS+IRS
Subjt:  GKSSIFVVRVSNKAASCLAASLGFVLENLPVHYLGLPLLSSRLHLNDCVPLIQRITSQIRS

KAA0065355.1 F17F8.5 [Cucumis melo var. makuwa]4.7e-4665.84Show/hide
Query:  MFSIMINGSLEGFFHGRKGFKTGP---------------------PQSFQFHQRCEKVILTYLTFADDLMIFYVVDGSSLSFVRESLQKFGEFSGLFANL
        MFSIMINGS EGFFHGRKG + G                      PQSFQFH+RCEKV L +LTFADDLMIF   D  SLSF+RE LQKFGE SGLF NL
Subjt:  MFSIMINGSLEGFFHGRKGFKTGP---------------------PQSFQFHQRCEKVILTYLTFADDLMIFYVVDGSSLSFVRESLQKFGEFSGLFANL

Query:  GKSSIFVVRVSNKAASCLAASLGFVLENLPVHYLGLPLLSSRLHLNDCVPLIQRITSQIRS
         KSSIFV  VSN+AAS LAAS+GFV  NLPV YLGLPLL  RL  NDC PLIQR+TS+IRS
Subjt:  GKSSIFVVRVSNKAASCLAASLGFVLENLPVHYLGLPLLSSRLHLNDCVPLIQRITSQIRS

TYK28099.1 uncharacterized protein E5676_scaffold1467G00020 [Cucumis melo var. makuwa]4.8e-4362.73Show/hide
Query:  MFSIMINGSLEGFFHGRKGFKTGP---------------------PQSFQFHQRCEKVILTYLTFADDLMIFYVVDGSSLSFVRESLQKFGEFSGLFANL
        MF IMINGSLEGFFHGRKG + G                      PQSFQFH RCEKV LT+LTFADDLMIF   D  S+ F+R+ LQKFGE SGLFAN 
Subjt:  MFSIMINGSLEGFFHGRKGFKTGP---------------------PQSFQFHQRCEKVILTYLTFADDLMIFYVVDGSSLSFVRESLQKFGEFSGLFANL

Query:  GKSSIFVVRVSNKAASCLAASLGFVLENLPVHYLGLPLLSSRLHLNDCVPLIQRITSQIRS
         KSSIFV  V+N+ AS LA  +GF   NLPV YLGLPLL+ RL  NDC PLIQRITSQIRS
Subjt:  GKSSIFVVRVSNKAASCLAASLGFVLENLPVHYLGLPLLSSRLHLNDCVPLIQRITSQIRS

TrEMBL top hitse value%identityAlignment
A0A5A7SPE5 Reverse transcriptase domain-containing protein2.3e-4362.73Show/hide
Query:  MFSIMINGSLEGFFHGRKGFKTGP---------------------PQSFQFHQRCEKVILTYLTFADDLMIFYVVDGSSLSFVRESLQKFGEFSGLFANL
        MF IMINGSLEGFFHGRKG + G                      PQSFQFH RCEKV LT+LTFADDLMIF   D  S+ F+R+ LQKFGE SGLFAN 
Subjt:  MFSIMINGSLEGFFHGRKGFKTGP---------------------PQSFQFHQRCEKVILTYLTFADDLMIFYVVDGSSLSFVRESLQKFGEFSGLFANL

Query:  GKSSIFVVRVSNKAASCLAASLGFVLENLPVHYLGLPLLSSRLHLNDCVPLIQRITSQIRS
         KSSIFV  V+N+ AS LA  +GF   NLPV YLGLPLL+ RL  NDC PLIQRITSQIRS
Subjt:  GKSSIFVVRVSNKAASCLAASLGFVLENLPVHYLGLPLLSSRLHLNDCVPLIQRITSQIRS

A0A5A7TKU4 Non-LTR retroelement reverse transcriptase-like protein4.3e-4564.6Show/hide
Query:  MFSIMINGSLEGFFHGRKGFKTG---------------------PPQSFQFHQRCEKVILTYLTFADDLMIFYVVDGSSLSFVRESLQKFGEFSGLFANL
        MFSIMINGSLEGFFHGRKG + G                     PPQ FQFHQ CEKV LT LTFADDLMIF V D  SLSFVRE+LQKFGE  GL+ANL
Subjt:  MFSIMINGSLEGFFHGRKGFKTG---------------------PPQSFQFHQRCEKVILTYLTFADDLMIFYVVDGSSLSFVRESLQKFGEFSGLFANL

Query:  GKSSIFVVRVSNKAASCLAASLGFVLENLPVHYLGLPLLSSRLHLNDCVPLIQRITSQIRS
        GK SIFV   +N+ AS LAA++GF+L NLPV YL LPLL+ RL  +DC PLIQRITS+IRS
Subjt:  GKSSIFVVRVSNKAASCLAASLGFVLENLPVHYLGLPLLSSRLHLNDCVPLIQRITSQIRS

A0A5A7V2L9 Putative reverse transcriptase4.7e-4463.35Show/hide
Query:  MFSIMINGSLEGFFHGRKGFKTGP---------------------PQSFQFHQRCEKVILTYLTFADDLMIFYVVDGSSLSFVRESLQKFGEFSGLFANL
        MFSIMINGSLEGFFHGRKG + G                      PQSF FH RCE V L +LTFADDLMIF   D SSL F+RE LQKFGE SGLF NL
Subjt:  MFSIMINGSLEGFFHGRKGFKTGP---------------------PQSFQFHQRCEKVILTYLTFADDLMIFYVVDGSSLSFVRESLQKFGEFSGLFANL

Query:  GKSSIFVVRVSNKAASCLAASLGFVLENLPVHYLGLPLLSSRLHLNDCVPLIQRITSQIRS
         K+S+FV  V+++ AS LAAS+GFVL NLPV YLGLPLLS RL  +DC PLIQRITS+IRS
Subjt:  GKSSIFVVRVSNKAASCLAASLGFVLENLPVHYLGLPLLSSRLHLNDCVPLIQRITSQIRS

A0A5A7VHU9 F17F8.52.3e-4665.84Show/hide
Query:  MFSIMINGSLEGFFHGRKGFKTGP---------------------PQSFQFHQRCEKVILTYLTFADDLMIFYVVDGSSLSFVRESLQKFGEFSGLFANL
        MFSIMINGS EGFFHGRKG + G                      PQSFQFH+RCEKV L +LTFADDLMIF   D  SLSF+RE LQKFGE SGLF NL
Subjt:  MFSIMINGSLEGFFHGRKGFKTGP---------------------PQSFQFHQRCEKVILTYLTFADDLMIFYVVDGSSLSFVRESLQKFGEFSGLFANL

Query:  GKSSIFVVRVSNKAASCLAASLGFVLENLPVHYLGLPLLSSRLHLNDCVPLIQRITSQIRS
         KSSIFV  VSN+AAS LAAS+GFV  NLPV YLGLPLL  RL  NDC PLIQR+TS+IRS
Subjt:  GKSSIFVVRVSNKAASCLAASLGFVLENLPVHYLGLPLLSSRLHLNDCVPLIQRITSQIRS

A0A5D3DXE4 Reverse transcriptase domain-containing protein2.3e-4362.73Show/hide
Query:  MFSIMINGSLEGFFHGRKGFKTGP---------------------PQSFQFHQRCEKVILTYLTFADDLMIFYVVDGSSLSFVRESLQKFGEFSGLFANL
        MF IMINGSLEGFFHGRKG + G                      PQSFQFH RCEKV LT+LTFADDLMIF   D  S+ F+R+ LQKFGE SGLFAN 
Subjt:  MFSIMINGSLEGFFHGRKGFKTGP---------------------PQSFQFHQRCEKVILTYLTFADDLMIFYVVDGSSLSFVRESLQKFGEFSGLFANL

Query:  GKSSIFVVRVSNKAASCLAASLGFVLENLPVHYLGLPLLSSRLHLNDCVPLIQRITSQIRS
         KSSIFV  V+N+ AS LA  +GF   NLPV YLGLPLL+ RL  NDC PLIQRITSQIRS
Subjt:  GKSSIFVVRVSNKAASCLAASLGFVLENLPVHYLGLPLLSSRLHLNDCVPLIQRITSQIRS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCTCCATTATGATTAATGGTTCCTTGGAGGGATTTTTCCATGGCAGGAAAGGTTTTAAGACAGGGCCACCCCAGAGTTTCCAATTTCATCAGCGTTGTGAGAAGGT
TATTTTAACTTACCTGACTTTTGCTGACGACCTTATGATATTTTATGTTGTTGATGGTTCCTCTCTGAGTTTTGTTCGTGAGTCTCTTCAGAAGTTTGGTGAGTTTTCGG
GTTTGTTTGCAAATCTTGGAAAAAGCTCTATTTTTGTTGTGAGGGTTAGTAATAAGGCTGCTTCTTGTCTGGCTGCTAGTTTGGGTTTTGTCCTTGAGAATCTCCCTGTT
CACTATCTTGGGCTCCCCTTACTTTCTAGTAGGTTACATCTTAATGATTGTGTTCCTCTTATTCAGCGTATTACTAGTCAAATTCGTTCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTCTCCATTATGATTAATGGTTCCTTGGAGGGATTTTTCCATGGCAGGAAAGGTTTTAAGACAGGGCCACCCCAGAGTTTCCAATTTCATCAGCGTTGTGAGAAGGT
TATTTTAACTTACCTGACTTTTGCTGACGACCTTATGATATTTTATGTTGTTGATGGTTCCTCTCTGAGTTTTGTTCGTGAGTCTCTTCAGAAGTTTGGTGAGTTTTCGG
GTTTGTTTGCAAATCTTGGAAAAAGCTCTATTTTTGTTGTGAGGGTTAGTAATAAGGCTGCTTCTTGTCTGGCTGCTAGTTTGGGTTTTGTCCTTGAGAATCTCCCTGTT
CACTATCTTGGGCTCCCCTTACTTTCTAGTAGGTTACATCTTAATGATTGTGTTCCTCTTATTCAGCGTATTACTAGTCAAATTCGTTCTTGA
Protein sequenceShow/hide protein sequence
MFSIMINGSLEGFFHGRKGFKTGPPQSFQFHQRCEKVILTYLTFADDLMIFYVVDGSSLSFVRESLQKFGEFSGLFANLGKSSIFVVRVSNKAASCLAASLGFVLENLPV
HYLGLPLLSSRLHLNDCVPLIQRITSQIRS