; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc09g0248031 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc09g0248031
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionGag-pol polyprotein
Genome locationCMiso1.1chr09:13266512..13267264
RNA-Seq ExpressionCmc09g0248031
SyntenyCmc09g0248031
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0056162.1 putative mitochondrial protein [Cucumis melo var. makuwa]1.3e-10480.66Show/hide
Query:  MHKAKPKRTPVATHLKMTKDINGEKVDTNLYRSIIGSLLYLIASRPDIAFAVGVCARYQVDPRTSHLHSAKRILKYVSGTFNYGLWYTFDTTGVLVGYCD
        M KAKP         K+TKD   EKVD++LYRSIIGSLLYL ASRPDIAF VGVCARYQ D RTSHLHSAKRILKY+ GT N+GLWYTFDTT VLVGYCD
Subjt:  MHKAKPKRTPVATHLKMTKDINGEKVDTNLYRSIIGSLLYLIASRPDIAFAVGVCARYQVDPRTSHLHSAKRILKYVSGTFNYGLWYTFDTTGVLVGYCD

Query:  ADWAGCSDDRKSTSGGCFFLGNNVAAWFSKKQNSVSLSTAEAKYIAAGSSCSQPMWMKQMLEEYGMTQSSMVLYCDNLSAISISKNPVQHSRTKHIDIRH
        ADWA CSDDRKSTS GCFFL NN+AAWFSKKQNSVSLSTAEAKYIA GSSCSQ +WMKQM+EEYG+ Q SMVLYCDN+S I+ISKNPVQHSRTK IDIRH
Subjt:  ADWAGCSDDRKSTSGGCFFLGNNVAAWFSKKQNSVSLSTAEAKYIAAGSSCSQPMWMKQMLEEYGMTQSSMVLYCDNLSAISISKNPVQHSRTKHIDIRH

Query:  HFIRELVEANIISLEHVLSAFQLADIFTKPLDVATFEGLRVSI
        HFIRELVEANIISLEHV S+ QLADIFTKPLDV+TFEGLR  +
Subjt:  HFIRELVEANIISLEHVLSAFQLADIFTKPLDVATFEGLRVSI

KAA0062326.1 putative mitochondrial protein [Cucumis melo var. makuwa]1.5e-13299.17Show/hide
Query:  MHKAKPKRTPVATHLKMTKDINGEKVDTNLYRSIIGSLLYLIASRPDIAFAVGVCARYQVDPRTSHLHSAKRILKYVSGTFNYGLWYTFDTTGVLVGYCD
        MHKAKPKRTPVATHLKMTKDINGEKVDTNLYRSIIGSLLYLIASRPDIAFAVGVCARYQVDPRTSHLHSAKRILKYVSGTFNYG+WYTFDTTGVLVGYCD
Subjt:  MHKAKPKRTPVATHLKMTKDINGEKVDTNLYRSIIGSLLYLIASRPDIAFAVGVCARYQVDPRTSHLHSAKRILKYVSGTFNYGLWYTFDTTGVLVGYCD

Query:  ADWAGCSDDRKSTSGGCFFLGNNVAAWFSKKQNSVSLSTAEAKYIAAGSSCSQPMWMKQMLEEYGMTQSSMVLYCDNLSAISISKNPVQHSRTKHIDIRH
        ADWAGCSDDRKSTSGGCFFLGNNVAAWFSKKQNSVS STAEAKYIAAGSSCSQPMWMKQMLEEYGMTQSSMVLYCDNLSAISISKNPVQHSRTKHIDIRH
Subjt:  ADWAGCSDDRKSTSGGCFFLGNNVAAWFSKKQNSVSLSTAEAKYIAAGSSCSQPMWMKQMLEEYGMTQSSMVLYCDNLSAISISKNPVQHSRTKHIDIRH

Query:  HFIRELVEANIISLEHVLSAFQLADIFTKPLDVATFEGLR
        HFIRELVEANIISLEHVLSAFQLADIFTKPLDVATFEGLR
Subjt:  HFIRELVEANIISLEHVLSAFQLADIFTKPLDVATFEGLR

TYJ96615.1 gag-pol polyprotein [Cucumis melo var. makuwa]1.4e-10683.12Show/hide
Query:  KAKPKRTPVATHLKMTKDINGEKVDTNLYRSIIGSLLYLIASRPDIAFAVGVCARYQVDPRTSHLHSAKRILKYVSGTFNYGLWYTFDTTGVLVGYCDAD
        KAK KRT  ATHLKMTKD  GEKVD++LYRS IGS LYLIAS+ DI FA+GVCARYQ +P+TSHLHSAKRILKY++ T NY LWYTFDTTGVLVGYCDAD
Subjt:  KAKPKRTPVATHLKMTKDINGEKVDTNLYRSIIGSLLYLIASRPDIAFAVGVCARYQVDPRTSHLHSAKRILKYVSGTFNYGLWYTFDTTGVLVGYCDAD

Query:  WAGCSDDRKSTSGGCFFLGNNVAAWFSKKQNSVSLSTAEAKYIAAGSSCSQPMWMKQMLEEYGMTQSSMVLYCDNLSAISISKNPVQHSRTKHIDIRHHF
        WAGCSDDRKSTS GCFFLGNN+A WFSKKQNSV LSTAEA+YIAAGSSCSQ + MKQM+EEYGMTQSS VLYCDN+SAISISKNPVQHSRTKHIDI HH 
Subjt:  WAGCSDDRKSTSGGCFFLGNNVAAWFSKKQNSVSLSTAEAKYIAAGSSCSQPMWMKQMLEEYGMTQSSMVLYCDNLSAISISKNPVQHSRTKHIDIRHHF

Query:  IRELVEANIISLEHVLSAFQLADIFTKPLDVATFEGL
        IRELVE NIISLEHV S  QLADIFTKPLDV+T EGL
Subjt:  IRELVEANIISLEHVLSAFQLADIFTKPLDVATFEGL

TYK21888.1 hypothetical protein E5676_scaffold494G00240 [Cucumis melo var. makuwa]4.8e-10278Show/hide
Query:  MHKAKPKRTPVATHLKMTKDINGEKVDTNLYRSIIGSLLYLIASRPDIAFAVGVCARYQVDPRTSHLHSAKRILKYVSGTFNYGLWYTFDTTGVLVGYCD
        M KA+PK+TP ATHLKMTKD+  EKVDTNLYRSIIGSLLYL ASRPDIAF VGVCARY                               DTTG LVGYCD
Subjt:  MHKAKPKRTPVATHLKMTKDINGEKVDTNLYRSIIGSLLYLIASRPDIAFAVGVCARYQVDPRTSHLHSAKRILKYVSGTFNYGLWYTFDTTGVLVGYCD

Query:  ADWAGCSDDRKSTSGGCFFLGNNVAAWFSKKQNSVSLSTAEAKYIAAGSSCSQPMWMKQMLEEYGMTQSSMVLYCDNLSAISISKNPVQHSRTKHIDIRH
        ADWAGC+DDRKSTS GCFFLGNN+A WFSKKQNSVSLSTAEA+YIAAGSSCSQ +WMKQML+EYG+TQSSM LYCDNLSAISISKNPVQHSRTKHIDIRH
Subjt:  ADWAGCSDDRKSTSGGCFFLGNNVAAWFSKKQNSVSLSTAEAKYIAAGSSCSQPMWMKQMLEEYGMTQSSMVLYCDNLSAISISKNPVQHSRTKHIDIRH

Query:  HFIRELVEANIISLEHVLSAFQLADIFTKPLDVATFEGLRVSIRVCQRPV
        HFIRELVEANIISLEHV SAFQLADIFTKPLDVATFEGLR S+ VCQRPV
Subjt:  HFIRELVEANIISLEHVLSAFQLADIFTKPLDVATFEGLRVSIRVCQRPV

TYK26648.1 putative mitochondrial protein [Cucumis melo var. makuwa]9.0e-13399.58Show/hide
Query:  MHKAKPKRTPVATHLKMTKDINGEKVDTNLYRSIIGSLLYLIASRPDIAFAVGVCARYQVDPRTSHLHSAKRILKYVSGTFNYGLWYTFDTTGVLVGYCD
        MHKAKPKRTPVATHLKMTKDINGEKVDTNLYRSIIGSLLYLIASRPDIAFAVGVCARYQVDPRTSHLHSAKRILKYVSGTFNYGLWYTFDTTGVLVGYCD
Subjt:  MHKAKPKRTPVATHLKMTKDINGEKVDTNLYRSIIGSLLYLIASRPDIAFAVGVCARYQVDPRTSHLHSAKRILKYVSGTFNYGLWYTFDTTGVLVGYCD

Query:  ADWAGCSDDRKSTSGGCFFLGNNVAAWFSKKQNSVSLSTAEAKYIAAGSSCSQPMWMKQMLEEYGMTQSSMVLYCDNLSAISISKNPVQHSRTKHIDIRH
        ADWAGCSDDRKSTSGGCFFLGNNVAAWFSKKQNSVS STAEAKYIAAGSSCSQPMWMKQMLEEYGMTQSSMVLYCDNLSAISISKNPVQHSRTKHIDIRH
Subjt:  ADWAGCSDDRKSTSGGCFFLGNNVAAWFSKKQNSVSLSTAEAKYIAAGSSCSQPMWMKQMLEEYGMTQSSMVLYCDNLSAISISKNPVQHSRTKHIDIRH

Query:  HFIRELVEANIISLEHVLSAFQLADIFTKPLDVATFEGLR
        HFIRELVEANIISLEHVLSAFQLADIFTKPLDVATFEGLR
Subjt:  HFIRELVEANIISLEHVLSAFQLADIFTKPLDVATFEGLR

TrEMBL top hitse value%identityAlignment
A0A5A7UJW3 Putative mitochondrial protein6.5e-10580.66Show/hide
Query:  MHKAKPKRTPVATHLKMTKDINGEKVDTNLYRSIIGSLLYLIASRPDIAFAVGVCARYQVDPRTSHLHSAKRILKYVSGTFNYGLWYTFDTTGVLVGYCD
        M KAKP         K+TKD   EKVD++LYRSIIGSLLYL ASRPDIAF VGVCARYQ D RTSHLHSAKRILKY+ GT N+GLWYTFDTT VLVGYCD
Subjt:  MHKAKPKRTPVATHLKMTKDINGEKVDTNLYRSIIGSLLYLIASRPDIAFAVGVCARYQVDPRTSHLHSAKRILKYVSGTFNYGLWYTFDTTGVLVGYCD

Query:  ADWAGCSDDRKSTSGGCFFLGNNVAAWFSKKQNSVSLSTAEAKYIAAGSSCSQPMWMKQMLEEYGMTQSSMVLYCDNLSAISISKNPVQHSRTKHIDIRH
        ADWA CSDDRKSTS GCFFL NN+AAWFSKKQNSVSLSTAEAKYIA GSSCSQ +WMKQM+EEYG+ Q SMVLYCDN+S I+ISKNPVQHSRTK IDIRH
Subjt:  ADWAGCSDDRKSTSGGCFFLGNNVAAWFSKKQNSVSLSTAEAKYIAAGSSCSQPMWMKQMLEEYGMTQSSMVLYCDNLSAISISKNPVQHSRTKHIDIRH

Query:  HFIRELVEANIISLEHVLSAFQLADIFTKPLDVATFEGLRVSI
        HFIRELVEANIISLEHV S+ QLADIFTKPLDV+TFEGLR  +
Subjt:  HFIRELVEANIISLEHVLSAFQLADIFTKPLDVATFEGLRVSI

A0A5A7V7C7 Putative mitochondrial protein7.4e-13399.17Show/hide
Query:  MHKAKPKRTPVATHLKMTKDINGEKVDTNLYRSIIGSLLYLIASRPDIAFAVGVCARYQVDPRTSHLHSAKRILKYVSGTFNYGLWYTFDTTGVLVGYCD
        MHKAKPKRTPVATHLKMTKDINGEKVDTNLYRSIIGSLLYLIASRPDIAFAVGVCARYQVDPRTSHLHSAKRILKYVSGTFNYG+WYTFDTTGVLVGYCD
Subjt:  MHKAKPKRTPVATHLKMTKDINGEKVDTNLYRSIIGSLLYLIASRPDIAFAVGVCARYQVDPRTSHLHSAKRILKYVSGTFNYGLWYTFDTTGVLVGYCD

Query:  ADWAGCSDDRKSTSGGCFFLGNNVAAWFSKKQNSVSLSTAEAKYIAAGSSCSQPMWMKQMLEEYGMTQSSMVLYCDNLSAISISKNPVQHSRTKHIDIRH
        ADWAGCSDDRKSTSGGCFFLGNNVAAWFSKKQNSVS STAEAKYIAAGSSCSQPMWMKQMLEEYGMTQSSMVLYCDNLSAISISKNPVQHSRTKHIDIRH
Subjt:  ADWAGCSDDRKSTSGGCFFLGNNVAAWFSKKQNSVSLSTAEAKYIAAGSSCSQPMWMKQMLEEYGMTQSSMVLYCDNLSAISISKNPVQHSRTKHIDIRH

Query:  HFIRELVEANIISLEHVLSAFQLADIFTKPLDVATFEGLR
        HFIRELVEANIISLEHVLSAFQLADIFTKPLDVATFEGLR
Subjt:  HFIRELVEANIISLEHVLSAFQLADIFTKPLDVATFEGLR

A0A5D3BDS2 Gag-pol polyprotein7.0e-10783.12Show/hide
Query:  KAKPKRTPVATHLKMTKDINGEKVDTNLYRSIIGSLLYLIASRPDIAFAVGVCARYQVDPRTSHLHSAKRILKYVSGTFNYGLWYTFDTTGVLVGYCDAD
        KAK KRT  ATHLKMTKD  GEKVD++LYRS IGS LYLIAS+ DI FA+GVCARYQ +P+TSHLHSAKRILKY++ T NY LWYTFDTTGVLVGYCDAD
Subjt:  KAKPKRTPVATHLKMTKDINGEKVDTNLYRSIIGSLLYLIASRPDIAFAVGVCARYQVDPRTSHLHSAKRILKYVSGTFNYGLWYTFDTTGVLVGYCDAD

Query:  WAGCSDDRKSTSGGCFFLGNNVAAWFSKKQNSVSLSTAEAKYIAAGSSCSQPMWMKQMLEEYGMTQSSMVLYCDNLSAISISKNPVQHSRTKHIDIRHHF
        WAGCSDDRKSTS GCFFLGNN+A WFSKKQNSV LSTAEA+YIAAGSSCSQ + MKQM+EEYGMTQSS VLYCDN+SAISISKNPVQHSRTKHIDI HH 
Subjt:  WAGCSDDRKSTSGGCFFLGNNVAAWFSKKQNSVSLSTAEAKYIAAGSSCSQPMWMKQMLEEYGMTQSSMVLYCDNLSAISISKNPVQHSRTKHIDIRHHF

Query:  IRELVEANIISLEHVLSAFQLADIFTKPLDVATFEGL
        IRELVE NIISLEHV S  QLADIFTKPLDV+T EGL
Subjt:  IRELVEANIISLEHVLSAFQLADIFTKPLDVATFEGL

A0A5D3DEL4 Integrase catalytic domain-containing protein2.3e-10278Show/hide
Query:  MHKAKPKRTPVATHLKMTKDINGEKVDTNLYRSIIGSLLYLIASRPDIAFAVGVCARYQVDPRTSHLHSAKRILKYVSGTFNYGLWYTFDTTGVLVGYCD
        M KA+PK+TP ATHLKMTKD+  EKVDTNLYRSIIGSLLYL ASRPDIAF VGVCARY                               DTTG LVGYCD
Subjt:  MHKAKPKRTPVATHLKMTKDINGEKVDTNLYRSIIGSLLYLIASRPDIAFAVGVCARYQVDPRTSHLHSAKRILKYVSGTFNYGLWYTFDTTGVLVGYCD

Query:  ADWAGCSDDRKSTSGGCFFLGNNVAAWFSKKQNSVSLSTAEAKYIAAGSSCSQPMWMKQMLEEYGMTQSSMVLYCDNLSAISISKNPVQHSRTKHIDIRH
        ADWAGC+DDRKSTS GCFFLGNN+A WFSKKQNSVSLSTAEA+YIAAGSSCSQ +WMKQML+EYG+TQSSM LYCDNLSAISISKNPVQHSRTKHIDIRH
Subjt:  ADWAGCSDDRKSTSGGCFFLGNNVAAWFSKKQNSVSLSTAEAKYIAAGSSCSQPMWMKQMLEEYGMTQSSMVLYCDNLSAISISKNPVQHSRTKHIDIRH

Query:  HFIRELVEANIISLEHVLSAFQLADIFTKPLDVATFEGLRVSIRVCQRPV
        HFIRELVEANIISLEHV SAFQLADIFTKPLDVATFEGLR S+ VCQRPV
Subjt:  HFIRELVEANIISLEHVLSAFQLADIFTKPLDVATFEGLRVSIRVCQRPV

A0A5D3DT11 Putative mitochondrial protein4.3e-13399.58Show/hide
Query:  MHKAKPKRTPVATHLKMTKDINGEKVDTNLYRSIIGSLLYLIASRPDIAFAVGVCARYQVDPRTSHLHSAKRILKYVSGTFNYGLWYTFDTTGVLVGYCD
        MHKAKPKRTPVATHLKMTKDINGEKVDTNLYRSIIGSLLYLIASRPDIAFAVGVCARYQVDPRTSHLHSAKRILKYVSGTFNYGLWYTFDTTGVLVGYCD
Subjt:  MHKAKPKRTPVATHLKMTKDINGEKVDTNLYRSIIGSLLYLIASRPDIAFAVGVCARYQVDPRTSHLHSAKRILKYVSGTFNYGLWYTFDTTGVLVGYCD

Query:  ADWAGCSDDRKSTSGGCFFLGNNVAAWFSKKQNSVSLSTAEAKYIAAGSSCSQPMWMKQMLEEYGMTQSSMVLYCDNLSAISISKNPVQHSRTKHIDIRH
        ADWAGCSDDRKSTSGGCFFLGNNVAAWFSKKQNSVS STAEAKYIAAGSSCSQPMWMKQMLEEYGMTQSSMVLYCDNLSAISISKNPVQHSRTKHIDIRH
Subjt:  ADWAGCSDDRKSTSGGCFFLGNNVAAWFSKKQNSVSLSTAEAKYIAAGSSCSQPMWMKQMLEEYGMTQSSMVLYCDNLSAISISKNPVQHSRTKHIDIRH

Query:  HFIRELVEANIISLEHVLSAFQLADIFTKPLDVATFEGLR
        HFIRELVEANIISLEHVLSAFQLADIFTKPLDVATFEGLR
Subjt:  HFIRELVEANIISLEHVLSAFQLADIFTKPLDVATFEGLR

SwissProt top hitse value%identityAlignment
P04146 Copia protein5.1e-3839.82Show/hide
Query:  RSIIGSLLY-LIASRPDIAFAVGVCARYQVDPRTSHLHSAKRILKYVSGTFNYGLWYTFDTT--GVLVGYCDADWAGCSDDRKSTSGGCFFLGN-NVAAW
        RS+IG L+Y ++ +RPD+  AV + +RY     +    + KR+L+Y+ GT +  L +  +      ++GY D+DWAG   DRKST+G  F + + N+  W
Subjt:  RSIIGSLLY-LIASRPDIAFAVGVCARYQVDPRTSHLHSAKRILKYVSGTFNYGLWYTFDTT--GVLVGYCDADWAGCSDDRKSTSGGCFFLGN-NVAAW

Query:  FSKKQNSVSLSTAEAKYIAAGSSCSQPMWMKQMLEEYGM-TQSSMVLYCDNLSAISISKNPVQHSRTKHIDIRHHFIRELVEANIISLEHVLSAFQLADI
         +K+QNSV+ S+ EA+Y+A   +  + +W+K +L    +  ++ + +Y DN   ISI+ NP  H R KHIDI++HF RE V+ N+I LE++ +  QLADI
Subjt:  FSKKQNSVSLSTAEAKYIAAGSSCSQPMWMKQMLEEYGM-TQSSMVLYCDNLSAISISKNPVQHSRTKHIDIRHHFIRELVEANIISLEHVLSAFQLADI

Query:  FTKPLDVATFEGLRVSIRVCQ
        FTKPL  A F  LR  + + Q
Subjt:  FTKPLDVATFEGLRVSIRVCQ

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-941.5e-4240.98Show/hide
Query:  MHKAKPKRTPVATHLKMTKDINGEKVDTN------LYRSIIGSLLY-LIASRPDIAFAVGVCARYQVDPRTSHLHSAKRILKYVSGTFNYGLWYTFDTTG
        M  AKP  TP+A HLK++K +    V+         Y S +GSL+Y ++ +RPDIA AVGV +R+  +P   H  + K IL+Y+ GT    L +   +  
Subjt:  MHKAKPKRTPVATHLKMTKDINGEKVDTN------LYRSIIGSLLY-LIASRPDIAFAVGVCARYQVDPRTSHLHSAKRILKYVSGTFNYGLWYTFDTTG

Query:  VLVGYCDADWAGCSDDRKSTSGGCFFLGNNVAAWFSKKQNSVSLSTAEAKYIAAGSSCSQPMWMKQMLEEYGMTQSSMVLYCDNLSAISISKNPVQHSRT
        +L GY DAD AG  D+RKS++G  F       +W SK Q  V+LST EA+YIAA  +  + +W+K+ L+E G+ Q   V+YCD+ SAI +SKN + H+RT
Subjt:  VLVGYCDADWAGCSDDRKSTSGGCFFLGNNVAAWFSKKQNSVSLSTAEAKYIAAGSSCSQPMWMKQMLEEYGMTQSSMVLYCDNLSAISISKNPVQHSRT

Query:  KHIDIRHHFIRELVEANIISLEHVLSAFQLADIFTKPLDVATFE
        KHID+R+H+IRE+V+   + +  + +    AD+ TK +    FE
Subjt:  KHIDIRHHFIRELVEANIISLEHVLSAFQLADIFTKPLDVATFE

P92519 Uncharacterized mitochondrial protein AtMg008107.1e-2436.94Show/hide
Query:  MHKAKPKRTPVATHLKMTKDINGEKV-DTNLYRSIIGSLLYLIASRPDIAFAVGVCARYQVDPRTSHLHSAKRILKYVSGTFNYGLWYTFDTTGVLVGYC
        M   KP  TP+   LK+   ++  K  D + +RSI+G+L YL  +RPDI++AV +  +   +P  +     KR+L+YV GT  +GL+   ++   +  +C
Subjt:  MHKAKPKRTPVATHLKMTKDINGEKV-DTNLYRSIIGSLLYLIASRPDIAFAVGVCARYQVDPRTSHLHSAKRILKYVSGTFNYGLWYTFDTTGVLVGYC

Query:  DADWAGCSDDRKSTSGGCFFLGNNVAAWFSKKQNSVSLSTAEAKYIAAGSSCSQPMW
        D+DWAGC+  R+ST+G C FLG N+ +W +K+Q +VS S+ E +Y A   + ++  W
Subjt:  DADWAGCSDDRKSTSGGCFFLGNNVAAWFSKKQNSVSLSTAEAKYIAAGSSCSQPMW

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE18.1e-4440.4Show/hide
Query:  MHKAKPKRTPVATHLKMTKDINGEKVDTNLYRSIIGSLLYLIASRPDIAFAVGVCARYQVDPRTSHLHSAKRILKYVSGTFNYGLWYTFDTTGVLVGYCD
        M  AKP  TP+A   K++     +  D   YR I+GSL YL  +RPDI++AV   +++   P   HL + KRIL+Y++GT N+G++     T  L  Y D
Subjt:  MHKAKPKRTPVATHLKMTKDINGEKVDTNLYRSIIGSLLYLIASRPDIAFAVGVCARYQVDPRTSHLHSAKRILKYVSGTFNYGLWYTFDTTGVLVGYCD

Query:  ADWAGCSDDRKSTSGGCFFLGNNVAAWFSKKQNSVSLSTAEAKYIAAGSSCSQPMWMKQMLEEYGMTQS-SMVLYCDNLSAISISKNPVQHSRTKHIDIR
        ADWAG  DD  ST+G   +LG++  +W SKKQ  V  S+ EA+Y +  ++ S+  W+  +L E G+  +   V+YCDN+ A  +  NPV HSR KHI I 
Subjt:  ADWAGCSDDRKSTSGGCFFLGNNVAAWFSKKQNSVSLSTAEAKYIAAGSSCSQPMWMKQMLEEYGMTQS-SMVLYCDNLSAISISKNPVQHSRTKHIDIR

Query:  HHFIRELVEANIISLEHVLSAFQLADIFTKPLDVATFEGLRVSIRVCQRP
        +HFIR  V++  + + HV +  QLAD  TKPL    F+     I V + P
Subjt:  HHFIRELVEANIISLEHVLSAFQLADIFTKPLDVATFEGLRVSIRVCQRP

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE26.2e-4440Show/hide
Query:  MHKAKPKRTPVATHLKMTKDINGEKVDTNLYRSIIGSLLYLIASRPDIAFAVGVCARYQVDPRTSHLHSAKRILKYVSGTFNYGLWYTFDTTGVLVGYCD
        M  AKP  TP+AT  K+T     +  D   YR I+GSL YL  +RPD+++AV   ++Y   P   H ++ KR+L+Y++GT ++G++     T  L  Y D
Subjt:  MHKAKPKRTPVATHLKMTKDINGEKVDTNLYRSIIGSLLYLIASRPDIAFAVGVCARYQVDPRTSHLHSAKRILKYVSGTFNYGLWYTFDTTGVLVGYCD

Query:  ADWAGCSDDRKSTSGGCFFLGNNVAAWFSKKQNSVSLSTAEAKYIAAGSSCSQPMWMKQMLEEYGMTQS-SMVLYCDNLSAISISKNPVQHSRTKHIDIR
        ADWAG +DD  ST+G   +LG++  +W SKKQ  V  S+ EA+Y +  ++ S+  W+  +L E G+  S   V+YCDN+ A  +  NPV HSR KHI + 
Subjt:  ADWAGCSDDRKSTSGGCFFLGNNVAAWFSKKQNSVSLSTAEAKYIAAGSSCSQPMWMKQMLEEYGMTQS-SMVLYCDNLSAISISKNPVQHSRTKHIDIR

Query:  HHFIRELVEANIISLEHVLSAFQLADIFTKPLDVATFEGLRVSIRVCQRP
        +HFIR  V++  + + HV +  QLAD  TKPL    F+     I V + P
Subjt:  HHFIRELVEANIISLEHVLSAFQLADIFTKPLDVATFEGLRVSIRVCQRP

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 81.1e-3537.28Show/hide
Query:  KPKRTPVATHLKMTKDINGEKVDTNLYRSIIGSLLYLIASRPDIAFAVGVCARYQVDPRTSHLHSAKRILKYVSGTFNYGLWYTFDTTGVLVGYCDADWA
        KP   P+   +  +    G+ VD   YR +IG L+YL  +R DI+FAV   +++   PR +H  +  +IL Y+ GT   GL+Y+      L  + DA + 
Subjt:  KPKRTPVATHLKMTKDINGEKVDTNLYRSIIGSLLYLIASRPDIAFAVGVCARYQVDPRTSHLHSAKRILKYVSGTFNYGLWYTFDTTGVLVGYCDADWA

Query:  GCSDDRKSTSGGCFFLGNNVAAWFSKKQNSVSLSTAEAKYIAAGSSCSQPMWMKQMLEEYGMTQSS-MVLYCDNLSAISISKNPVQHSRTKHIDIRHHFI
         C D R+ST+G C FLG ++ +W SKKQ  VS S+AEA+Y A   +  + MW+ Q   E  +  S   +L+CDN +AI I+ N V H RTKHI+   H +
Subjt:  GCSDDRKSTSGGCFFLGNNVAAWFSKKQNSVSLSTAEAKYIAAGSSCSQPMWMKQMLEEYGMTQSS-MVLYCDNLSAISISKNPVQHSRTKHIDIRHHFI

Query:  RELVEANIISLEHVLSAFQLADIFTKPL
        RE       +L +   A+   D FT+ L
Subjt:  RELVEANIISLEHVLSAFQLADIFTKPL

ATMG00240.1 Gag-Pol-related retrotransposon family protein1.4e-1135.56Show/hide
Query:  LYLIASRPDIAFAVGVCARYQVDPRTSHLHSAKRILKYVSGTFNYGLWYTFDTTGVLVGYCDADWAGCSDDRKSTSGGCFFLGNNVAAWF
        +YL  +RPD+ FAV   +++    RT+ + +  ++L YV GT   GL+Y+  +   L  + D+DWA C D R+S +G C    + V  WF
Subjt:  LYLIASRPDIAFAVGVCARYQVDPRTSHLHSAKRILKYVSGTFNYGLWYTFDTTGVLVGYCDADWAGCSDDRKSTSGGCFFLGNNVAAWF

ATMG00810.1 DNA/RNA polymerases superfamily protein5.1e-2536.94Show/hide
Query:  MHKAKPKRTPVATHLKMTKDINGEKV-DTNLYRSIIGSLLYLIASRPDIAFAVGVCARYQVDPRTSHLHSAKRILKYVSGTFNYGLWYTFDTTGVLVGYC
        M   KP  TP+   LK+   ++  K  D + +RSI+G+L YL  +RPDI++AV +  +   +P  +     KR+L+YV GT  +GL+   ++   +  +C
Subjt:  MHKAKPKRTPVATHLKMTKDINGEKV-DTNLYRSIIGSLLYLIASRPDIAFAVGVCARYQVDPRTSHLHSAKRILKYVSGTFNYGLWYTFDTTGVLVGYC

Query:  DADWAGCSDDRKSTSGGCFFLGNNVAAWFSKKQNSVSLSTAEAKYIAAGSSCSQPMW
        D+DWAGC+  R+ST+G C FLG N+ +W +K+Q +VS S+ E +Y A   + ++  W
Subjt:  DADWAGCSDDRKSTSGGCFFLGNNVAAWFSKKQNSVSLSTAEAKYIAAGSSCSQPMW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCACAAGGCCAAACCAAAAAGAACACCCGTCGCTACACATCTGAAAATGACCAAGGATATAAATGGAGAAAAAGTTGATACAAATTTGTACCGCAGTATCATTGGCAG
TTTGCTCTACCTCATAGCCAGCAGACCAGATATAGCTTTTGCAGTAGGCGTGTGTGCTCGATATCAGGTTGACCCTCGAACATCACATCTTCATAGTGCTAAACGCATAC
TGAAATATGTATCAGGTACATTTAATTATGGTCTTTGGTATACTTTTGATACAACTGGTGTTCTTGTTGGCTACTGCGATGCAGACTGGGCAGGGTGTTCGGATGATCGG
AAGAGCACGTCTGGAGGGTGTTTCTTCTTAGGGAATAATGTAGCAGCCTGGTTTAGCAAGAAACAAAACAGTGTTTCACTCTCAACGGCAGAAGCCAAATACATAGCTGC
AGGGAGTAGTTGTTCCCAACCCATGTGGATGAAACAAATGCTTGAAGAGTATGGGATGACTCAATCATCCATGGTTCTTTACTGCGATAATCTGAGTGCAATAAGCATCT
CCAAAAACCCAGTTCAACATAGTCGAACAAAGCACATAGATATCCGTCATCATTTTATTCGGGAATTAGTCGAAGCCAATATTATCAGTTTAGAACATGTTTTGAGTGCA
TTTCAACTAGCTGATATATTTACTAAGCCTTTGGATGTGGCCACATTTGAAGGATTAAGGGTCAGCATTAGAGTCTGTCAACGGCCTGTATGA
mRNA sequenceShow/hide mRNA sequence
ATGCACAAGGCCAAACCAAAAAGAACACCCGTCGCTACACATCTGAAAATGACCAAGGATATAAATGGAGAAAAAGTTGATACAAATTTGTACCGCAGTATCATTGGCAG
TTTGCTCTACCTCATAGCCAGCAGACCAGATATAGCTTTTGCAGTAGGCGTGTGTGCTCGATATCAGGTTGACCCTCGAACATCACATCTTCATAGTGCTAAACGCATAC
TGAAATATGTATCAGGTACATTTAATTATGGTCTTTGGTATACTTTTGATACAACTGGTGTTCTTGTTGGCTACTGCGATGCAGACTGGGCAGGGTGTTCGGATGATCGG
AAGAGCACGTCTGGAGGGTGTTTCTTCTTAGGGAATAATGTAGCAGCCTGGTTTAGCAAGAAACAAAACAGTGTTTCACTCTCAACGGCAGAAGCCAAATACATAGCTGC
AGGGAGTAGTTGTTCCCAACCCATGTGGATGAAACAAATGCTTGAAGAGTATGGGATGACTCAATCATCCATGGTTCTTTACTGCGATAATCTGAGTGCAATAAGCATCT
CCAAAAACCCAGTTCAACATAGTCGAACAAAGCACATAGATATCCGTCATCATTTTATTCGGGAATTAGTCGAAGCCAATATTATCAGTTTAGAACATGTTTTGAGTGCA
TTTCAACTAGCTGATATATTTACTAAGCCTTTGGATGTGGCCACATTTGAAGGATTAAGGGTCAGCATTAGAGTCTGTCAACGGCCTGTATGA
Protein sequenceShow/hide protein sequence
MHKAKPKRTPVATHLKMTKDINGEKVDTNLYRSIIGSLLYLIASRPDIAFAVGVCARYQVDPRTSHLHSAKRILKYVSGTFNYGLWYTFDTTGVLVGYCDADWAGCSDDR
KSTSGGCFFLGNNVAAWFSKKQNSVSLSTAEAKYIAAGSSCSQPMWMKQMLEEYGMTQSSMVLYCDNLSAISISKNPVQHSRTKHIDIRHHFIRELVEANIISLEHVLSA
FQLADIFTKPLDVATFEGLRVSIRVCQRPV