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Cmc09g0248251 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc09g0248251
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionGibberellin regulated protein
Genome locationCMiso1.1chr09:13534910..13536180
RNA-Seq ExpressionCmc09g0248251
SyntenyCmc09g0248251
Gene Ontology termsGO:0009740 - gibberellic acid mediated signaling pathway (biological process)
GO:0005576 - extracellular region (cellular component)
InterPro domainsIPR003854 - Gibberellin regulated protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008460555.1 PREDICTED: protein RSI-1-like [Cucumis melo]1.6e-50100Show/hide
Query:  MAPSFTSFFFLFSILFLLTLSNLHSAEGASNLRPSDCKPKCSYRCSATSHRKPCMFFCQKCCAKCLCVPPGTYGNKQECPCYNNWKTQQGGPKCP
        MAPSFTSFFFLFSILFLLTLSNLHSAEGASNLRPSDCKPKCSYRCSATSHRKPCMFFCQKCCAKCLCVPPGTYGNKQECPCYNNWKTQQGGPKCP
Subjt:  MAPSFTSFFFLFSILFLLTLSNLHSAEGASNLRPSDCKPKCSYRCSATSHRKPCMFFCQKCCAKCLCVPPGTYGNKQECPCYNNWKTQQGGPKCP

XP_011656217.1 protein RSI-1-like [Cucumis sativus]4.6e-4591.58Show/hide
Query:  MAPSFTSFFFLFSILFLLTLSNLHSAEGASNLRPSDCKPKCSYRCSATSHRKPCMFFCQKCCAKCLCVPPGTYGNKQECPCYNNWKTQQGGPKCP
        MA SFT  FFLFSILFLLT+SNLH AEGA NLRPSDCKPKCSYRCSAT+HRKPCMFFCQKCCAKCLCVP GTYGNKQECPCYNNWKTQQGGPKCP
Subjt:  MAPSFTSFFFLFSILFLLTLSNLHSAEGASNLRPSDCKPKCSYRCSATSHRKPCMFFCQKCCAKCLCVPPGTYGNKQECPCYNNWKTQQGGPKCP

XP_028769877.1 protein RSI-1-like [Prosopis alba]2.7e-3776.6Show/hide
Query:  APSFTSFFFLFSILFLLTLSNLHSAEGASNLRPSDCKPKCSYRCSATSHRKPCMFFCQKCCAKCLCVPPGTYGNKQECPCYNNWKTQQGGPKCP
        AP+  S F L S+L L+T S +  A G SNLRPSDCKPKC+YRCSATSH+KPCMFFCQKCCAKCLCVP GTYGNKQ CPCYNNWKT++GGPKCP
Subjt:  APSFTSFFFLFSILFLLTLSNLHSAEGASNLRPSDCKPKCSYRCSATSHRKPCMFFCQKCCAKCLCVPPGTYGNKQECPCYNNWKTQQGGPKCP

XP_028800529.1 LOW QUALITY PROTEIN: protein RSI-1-like [Prosopis alba]4.6e-3776.6Show/hide
Query:  APSFTSFFFLFSILFLLTLSNLHSAEGASNLRPSDCKPKCSYRCSATSHRKPCMFFCQKCCAKCLCVPPGTYGNKQECPCYNNWKTQQGGPKCP
        AP+  S F L S+L L+T S +  A G SNLRPSDCKPKC+YRCSATSH+KPCMFFCQKCCAKCLCVP GTYGNKQ CPCYNNWK Q+GGPKCP
Subjt:  APSFTSFFFLFSILFLLTLSNLHSAEGASNLRPSDCKPKCSYRCSATSHRKPCMFFCQKCCAKCLCVPPGTYGNKQECPCYNNWKTQQGGPKCP

XP_038876048.1 protein RSI-1-like [Benincasa hispida]4.1e-3883.16Show/hide
Query:  MAPSFTSFFFLFSILFLLTLSNLHSAEGASNLRPSDCKPKCSYRCSATSHRKPCMFFCQKCCAKCLCVPPGTYGNKQECPCYNNWKTQQGGPKCP
        MA S       F ILF LT S+LH AE ASNLRPSDCKPKC+YRCSATSHRKPCMFFCQKCCAKCLCVPPGTYGNKQ CPCYNNWKTQQGGPKCP
Subjt:  MAPSFTSFFFLFSILFLLTLSNLHSAEGASNLRPSDCKPKCSYRCSATSHRKPCMFFCQKCCAKCLCVPPGTYGNKQECPCYNNWKTQQGGPKCP

TrEMBL top hitse value%identityAlignment
A0A0B0MCW6 protein RSI-11.4e-3676.09Show/hide
Query:  SFTSFFFLFSILFLLTLSNLHSAEGASNLRPSDCKPKCSYRCSATSHRKPCMFFCQKCCAKCLCVPPGTYGNKQECPCYNNWKTQQGGPKCP
        S +SF  LFS+L L+TLS++  A G++ LRPSDCKP+CSYRCSATSH+KPCMFFC KCC+KCLCVPPGTYGNKQ CPCYNNWKT+ GGPKCP
Subjt:  SFTSFFFLFSILFLLTLSNLHSAEGASNLRPSDCKPKCSYRCSATSHRKPCMFFCQKCCAKCLCVPPGTYGNKQECPCYNNWKTQQGGPKCP

A0A1S3CD72 protein RSI-1-like7.8e-51100Show/hide
Query:  MAPSFTSFFFLFSILFLLTLSNLHSAEGASNLRPSDCKPKCSYRCSATSHRKPCMFFCQKCCAKCLCVPPGTYGNKQECPCYNNWKTQQGGPKCP
        MAPSFTSFFFLFSILFLLTLSNLHSAEGASNLRPSDCKPKCSYRCSATSHRKPCMFFCQKCCAKCLCVPPGTYGNKQECPCYNNWKTQQGGPKCP
Subjt:  MAPSFTSFFFLFSILFLLTLSNLHSAEGASNLRPSDCKPKCSYRCSATSHRKPCMFFCQKCCAKCLCVPPGTYGNKQECPCYNNWKTQQGGPKCP

A0A5D2YHZ2 Uncharacterized protein1.4e-3676.09Show/hide
Query:  SFTSFFFLFSILFLLTLSNLHSAEGASNLRPSDCKPKCSYRCSATSHRKPCMFFCQKCCAKCLCVPPGTYGNKQECPCYNNWKTQQGGPKCP
        S +SF  LFS+L L+TLS++  A G++ LRPSDCKP+CSYRCSATSH+KPCMFFC KCC+KCLCVPPGTYGNKQ CPCYNNWKT+ GGPKCP
Subjt:  SFTSFFFLFSILFLLTLSNLHSAEGASNLRPSDCKPKCSYRCSATSHRKPCMFFCQKCCAKCLCVPPGTYGNKQECPCYNNWKTQQGGPKCP

A0A5N6QWU7 Uncharacterized protein6.4e-3777.17Show/hide
Query:  SFTSFFFLFSILFLLTLSNLHSAEGASNLRPSDCKPKCSYRCSATSHRKPCMFFCQKCCAKCLCVPPGTYGNKQECPCYNNWKTQQGGPKCP
        S+ S   LFS+LFLLT S +  A   + LRPSDCKPKC+YRCSATSH+KPCMFFC KCC+KCLCVPPGTYGNKQ CPCYNNWKTQQGGPKCP
Subjt:  SFTSFFFLFSILFLLTLSNLHSAEGASNLRPSDCKPKCSYRCSATSHRKPCMFFCQKCCAKCLCVPPGTYGNKQECPCYNNWKTQQGGPKCP

A0A6J1CII9 protein RSI-1-like3.8e-3785.06Show/hide
Query:  FFLFSILFLLTLSNLHSAEGASNLRPSDCKPKCSYRCSATSHRKPCMFFCQKCCAKCLCVPPGTYGNKQECPCYNNWKTQQGGPKCP
        +  F ILF LTLS LH AE ASN  PSDCKP+CSYRCSATSH+KPCMFFCQKCCAKCLCVPPGTYGNKQ CPCYNNWKTQQGGPKCP
Subjt:  FFLFSILFLLTLSNLHSAEGASNLRPSDCKPKCSYRCSATSHRKPCMFFCQKCCAKCLCVPPGTYGNKQECPCYNNWKTQQGGPKCP

SwissProt top hitse value%identityAlignment
P27057 Protein GAST16.6e-3182.81Show/hide
Query:  LRPSDCKPKCSYRCSATSHRKPCMFFCQKCCAKCLCVPPGTYGNKQECPCYNNWKTQQGGPKCP
        L P DC+PKC+YRCS TS++KPCMFFCQKCCAKCLCVP GTYGNKQ CPCYNNWKT++GGPKCP
Subjt:  LRPSDCKPKCSYRCSATSHRKPCMFFCQKCCAKCLCVPPGTYGNKQECPCYNNWKTQQGGPKCP

P47926 Protein RSI-14.9e-3473.33Show/hide
Query:  SFFFLFSI-LFLLTLSNLHSAEGASNLRPSDCKPKCSYRCSATSHRKPCMFFCQKCCAKCLCVPPGTYGNKQECPCYNNWKTQQGGPKCP
        SF  L S+ L LLT SN+   EG + LRP+DCKP+C+YRCSATSH+KPCMFFCQKCCA CLCVP G YGNKQ CPCYNNWKTQ+G PKCP
Subjt:  SFFFLFSI-LFLLTLSNLHSAEGASNLRPSDCKPKCSYRCSATSHRKPCMFFCQKCCAKCLCVPPGTYGNKQECPCYNNWKTQQGGPKCP

Q6GKX7 Gibberellin-regulated protein 126.2e-2956.57Show/hide
Query:  FFLFSILFLLTLSN------------LHSAEGASNLRPSDCKPKCSYRCSATSHRKPCMFFCQKCCAKCLCVPPGTYGNKQECPCYNNWKTQQGGPKCP
        F + S+LF    SN            +H   G  +L+P +C   C YRCSATSHRKPC+FFC KCC KCLCVP GTYG+K+ECPCYNNW T++GGPKCP
Subjt:  FFLFSILFLLTLSN------------LHSAEGASNLRPSDCKPKCSYRCSATSHRKPCMFFCQKCCAKCLCVPPGTYGNKQECPCYNNWKTQQGGPKCP

Q6NMQ7 Gibberellin-regulated protein 63.1e-2859.41Show/hide
Query:  MAPSFTSFFFLFSILFLLTLSNLHSAE------GASNLRPSDCKPKCSYRCSATSHRKPCMFFCQKCCAKCLCVPPGTYGNKQECPCYNNWKTQQGGPKC
        MA   TSF  L  +   + L+    AE      G  +L+   C  +C+ RCS T + KPCMFFCQKCCAKCLCVPPGTYGNKQ CPCYNNWKTQQGGPKC
Subjt:  MAPSFTSFFFLFSILFLLTLSNLHSAE------GASNLRPSDCKPKCSYRCSATSHRKPCMFFCQKCCAKCLCVPPGTYGNKQECPCYNNWKTQQGGPKC

Query:  P
        P
Subjt:  P

Q84J95 Gibberellin-regulated protein 57.1e-3368.97Show/hide
Query:  FLFSILFLLTLSNL-HSAEGASNLRPSDCKPKCSYRCSATSHRKPCMFFCQKCCAKCLCVPPGTYGNKQECPCYNNWKTQQGGPKCP
        F  ++LFLL++SNL  +A G   L+P  C  KCS+RCSATSH+KPCMFFC KCC KCLCVPPGT+GNKQ CPCYNNWKT++G PKCP
Subjt:  FLFSILFLLTLSNL-HSAEGASNLRPSDCKPKCSYRCSATSHRKPCMFFCQKCCAKCLCVPPGTYGNKQECPCYNNWKTQQGGPKCP

Arabidopsis top hitse value%identityAlignment
AT1G74670.1 Gibberellin-regulated family protein2.2e-2959.41Show/hide
Query:  MAPSFTSFFFLFSILFLLTLSNLHSAE------GASNLRPSDCKPKCSYRCSATSHRKPCMFFCQKCCAKCLCVPPGTYGNKQECPCYNNWKTQQGGPKC
        MA   TSF  L  +   + L+    AE      G  +L+   C  +C+ RCS T + KPCMFFCQKCCAKCLCVPPGTYGNKQ CPCYNNWKTQQGGPKC
Subjt:  MAPSFTSFFFLFSILFLLTLSNLHSAE------GASNLRPSDCKPKCSYRCSATSHRKPCMFFCQKCCAKCLCVPPGTYGNKQECPCYNNWKTQQGGPKC

Query:  P
        P
Subjt:  P

AT2G30810.1 Gibberellin-regulated family protein4.4e-3056.57Show/hide
Query:  FFLFSILFLLTLSN------------LHSAEGASNLRPSDCKPKCSYRCSATSHRKPCMFFCQKCCAKCLCVPPGTYGNKQECPCYNNWKTQQGGPKCP
        F + S+LF    SN            +H   G  +L+P +C   C YRCSATSHRKPC+FFC KCC KCLCVP GTYG+K+ECPCYNNW T++GGPKCP
Subjt:  FFLFSILFLLTLSN------------LHSAEGASNLRPSDCKPKCSYRCSATSHRKPCMFFCQKCCAKCLCVPPGTYGNKQECPCYNNWKTQQGGPKCP

AT3G02885.1 GAST1 protein homolog 55.0e-3468.97Show/hide
Query:  FLFSILFLLTLSNL-HSAEGASNLRPSDCKPKCSYRCSATSHRKPCMFFCQKCCAKCLCVPPGTYGNKQECPCYNNWKTQQGGPKCP
        F  ++LFLL++SNL  +A G   L+P  C  KCS+RCSATSH+KPCMFFC KCC KCLCVPPGT+GNKQ CPCYNNWKT++G PKCP
Subjt:  FLFSILFLLTLSNL-HSAEGASNLRPSDCKPKCSYRCSATSHRKPCMFFCQKCCAKCLCVPPGTYGNKQECPCYNNWKTQQGGPKCP

AT3G10185.1 Gibberellin-regulated family protein1.0e-2653.4Show/hide
Query:  MAPSFTSFFFLFSILFLLTLSNLH-------SAEGASNLRP-SDCKPKCSYRCSATSHRKPCMFFCQKCCAKCLCVPPGTYGNKQECPCYNNWKTQQGGP
        MA   +   F   +L LL  +++H         E  S + P  +C P+C  RCS T ++KPC+FFC KCC KCLCVPPGTYGNKQ CPCYNNWKT+ GGP
Subjt:  MAPSFTSFFFLFSILFLLTLSNLH-------SAEGASNLRP-SDCKPKCSYRCSATSHRKPCMFFCQKCCAKCLCVPPGTYGNKQECPCYNNWKTQQGGP

Query:  KCP
        KCP
Subjt:  KCP

AT5G15230.2 GAST1 protein homolog 41.8e-2361.76Show/hide
Query:  GASNLRPSDCKPKCSYRCSATSHRKPCMFFCQKCCAKCLCVPPGTYGNKQECPCYNNWKTQQGGPKCP
        G  +L+ + C  +C  RC  T + K C+ FC KCC KCLCVPPG YGNKQ C CYNNWKTQ+GGPKCP
Subjt:  GASNLRPSDCKPKCSYRCSATSHRKPCMFFCQKCCAKCLCVPPGTYGNKQECPCYNNWKTQQGGPKCP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCACCCTCTTTCACCTCCTTCTTCTTTCTCTTCTCCATCCTCTTTCTTCTCACTCTCTCTAATCTGCATTCGGCTGAGGGTGCTTCAAACTTACGTCCTTCAGATTG
CAAGCCGAAATGCAGTTATCGATGCTCGGCAACATCGCACAGGAAGCCATGCATGTTCTTCTGCCAAAAATGTTGTGCAAAATGTCTGTGTGTACCTCCAGGGACATATG
GAAACAAGCAAGAATGTCCATGCTACAATAACTGGAAAACTCAGCAAGGAGGTCCCAAATGCCCTTAA
mRNA sequenceShow/hide mRNA sequence
TTATAACCCACAAAATGGCACCCTCTTTCACCTCCTTCTTCTTTCTCTTCTCCATCCTCTTTCTTCTCACTCTCTCTAATCTGCATTCGGCTGAGGGTGCTTCAAACTTA
CGTCCTTCAGATTGCAAGCCGAAATGCAGTTATCGATGCTCGGCAACATCGCACAGGAAGCCATGCATGTTCTTCTGCCAAAAATGTTGTGCAAAATGTCTGTGTGTACC
TCCAGGGACATATGGAAACAAGCAAGAATGTCCATGCTACAATAACTGGAAAACTCAGCAAGGAGGTCCCAAATGCCCTTAAGAGGCCAAAAAATATAAGACCTTTTCTT
TTCTCCTACCTTCATTTTTAGTTTCATTATTTCTTTCTTTGTGGATTTTATTTTCTTCCTTTGTCAGAGTGGGAGATCGGAGAAAAAAACTGCTCAAATTTGACCCGTAT
GCATTTCCATTATTGATGGTCATACTAGTGACTTGAAAATAATGTTTCATAAAAGTATTTTTATGCTCTAGTAGAAAAATTAT
Protein sequenceShow/hide protein sequence
MAPSFTSFFFLFSILFLLTLSNLHSAEGASNLRPSDCKPKCSYRCSATSHRKPCMFFCQKCCAKCLCVPPGTYGNKQECPCYNNWKTQQGGPKCP