; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc09g0248411 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc09g0248411
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionCysteine desulfurase
Genome locationCMiso1.1chr09:13868360..13870601
RNA-Seq ExpressionCmc09g0248411
SyntenyCmc09g0248411
Gene Ontology termsGO:0000122 - negative regulation of transcription by RNA polymerase II (biological process)
GO:0006325 - chromatin organization (biological process)
GO:0006534 - cysteine metabolic process (biological process)
GO:0007049 - cell cycle (biological process)
GO:0016575 - histone deacetylation (biological process)
GO:0051301 - cell division (biological process)
GO:1901566 - organonitrogen compound biosynthetic process (biological process)
GO:0000118 - histone deacetylase complex (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0004407 - histone deacetylase activity (molecular function)
GO:0030170 - pyridoxal phosphate binding (molecular function)
GO:0031071 - cysteine desulfurase activity (molecular function)
InterPro domainsIPR000192 - Aminotransferase class V domain
IPR015422 - Pyridoxal phosphate-dependent transferase, small domain
IPR015424 - Pyridoxal phosphate-dependent transferase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6570440.1 Cysteine desulfurase 1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]4.8e-0982.05Show/hide
Query:  IKSGHHCVQPLHRALNVSSSAQTSLYFYKTKEDVDYFIR
        I+SGHHC QPLHRAL VSSSA+ SLYFY TKEDVDYFI+
Subjt:  IKSGHHCVQPLHRALNVSSSAQTSLYFYKTKEDVDYFIR

KAG7010312.1 Cysteine desulfurase 1, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]4.8e-0982.05Show/hide
Query:  IKSGHHCVQPLHRALNVSSSAQTSLYFYKTKEDVDYFIR
        I+SGHHC QPLHRAL VSSSA+ SLYFY TKEDVDYFI+
Subjt:  IKSGHHCVQPLHRALNVSSSAQTSLYFYKTKEDVDYFIR

KGN48344.2 hypothetical protein Csa_002961 [Cucumis sativus]4.8e-0982.05Show/hide
Query:  IKSGHHCVQPLHRALNVSSSAQTSLYFYKTKEDVDYFIR
        I+SGHHC QPLHRAL VSSSA+ SLYFY TKEDVDYFI+
Subjt:  IKSGHHCVQPLHRALNVSSSAQTSLYFYKTKEDVDYFIR

XP_022943969.1 cysteine desulfurase 1, chloroplastic-like [Cucurbita moschata]4.8e-0982.05Show/hide
Query:  IKSGHHCVQPLHRALNVSSSAQTSLYFYKTKEDVDYFIR
        I+SGHHC QPLHRAL VSSSA+ SLYFY TKEDVDYFI+
Subjt:  IKSGHHCVQPLHRALNVSSSAQTSLYFYKTKEDVDYFIR

XP_023513282.1 cysteine desulfurase 1, chloroplastic-like [Cucurbita pepo subsp. pepo]4.8e-0982.05Show/hide
Query:  IKSGHHCVQPLHRALNVSSSAQTSLYFYKTKEDVDYFIR
        I+SGHHC QPLHRAL VSSSA+ SLYFY TKEDVDYFI+
Subjt:  IKSGHHCVQPLHRALNVSSSAQTSLYFYKTKEDVDYFIR

TrEMBL top hitse value%identityAlignment
A0A0A0KEG9 Cysteine desulfurase2.3e-0982.05Show/hide
Query:  IKSGHHCVQPLHRALNVSSSAQTSLYFYKTKEDVDYFIR
        I+SGHHC QPLHRAL VSSSA+ SLYFY TKEDVDYFI+
Subjt:  IKSGHHCVQPLHRALNVSSSAQTSLYFYKTKEDVDYFIR

A0A5A7V4C2 B-like cyclin5.1e-0979.49Show/hide
Query:  IKSGHHCVQPLHRALNVSSSAQTSLYFYKTKEDVDYFIR
        I+SGHHC QPLHRAL V+SSA+ SLYFY TKEDVDYFI+
Subjt:  IKSGHHCVQPLHRALNVSSSAQTSLYFYKTKEDVDYFIR

A0A5D3BAD5 B-like cyclin5.1e-0979.49Show/hide
Query:  IKSGHHCVQPLHRALNVSSSAQTSLYFYKTKEDVDYFIR
        I+SGHHC QPLHRAL V+SSA+ SLYFY TKEDVDYFI+
Subjt:  IKSGHHCVQPLHRALNVSSSAQTSLYFYKTKEDVDYFIR

A0A6J1DJL0 Cysteine desulfurase2.3e-0982.05Show/hide
Query:  IKSGHHCVQPLHRALNVSSSAQTSLYFYKTKEDVDYFIR
        I+SGHHC QPLHRAL VSSSA+ SLYFY TKEDVDYFI+
Subjt:  IKSGHHCVQPLHRALNVSSSAQTSLYFYKTKEDVDYFIR

A0A6J1FVQ2 Cysteine desulfurase2.3e-0982.05Show/hide
Query:  IKSGHHCVQPLHRALNVSSSAQTSLYFYKTKEDVDYFIR
        I+SGHHC QPLHRAL VSSSA+ SLYFY TKEDVDYFI+
Subjt:  IKSGHHCVQPLHRALNVSSSAQTSLYFYKTKEDVDYFIR

SwissProt top hitse value%identityAlignment
Q55793 Probable cysteine desulfurase1.1e-0859.52Show/hide
Query:  IKSGHHCVQPLHRALNVSSSAQTSLYFYKTKEDVDYFIRHFQ
        I+SGHHC QPLHR  + S SA+ SLYFY TKE++D F++  Q
Subjt:  IKSGHHCVQPLHRALNVSSSAQTSLYFYKTKEDVDYFIRHFQ

Q5HHH0 Probable cysteine desulfurase1.0e-0653.49Show/hide
Query:  SRSTTIKSGHHCVQPLHRALNVSSSAQTSLYFYKTKEDVDYFI
        +    +++GHHC QPL + LNVSS+A+ S Y Y TKEDVD  I
Subjt:  SRSTTIKSGHHCVQPLHRALNVSSSAQTSLYFYKTKEDVDYFI

Q6GB11 Probable cysteine desulfurase1.0e-0653.49Show/hide
Query:  SRSTTIKSGHHCVQPLHRALNVSSSAQTSLYFYKTKEDVDYFI
        +    +++GHHC QPL + LNVSS+A+ S Y Y TKEDVD  I
Subjt:  SRSTTIKSGHHCVQPLHRALNVSSSAQTSLYFYKTKEDVDYFI

Q6GIH2 Probable cysteine desulfurase1.0e-0653.49Show/hide
Query:  SRSTTIKSGHHCVQPLHRALNVSSSAQTSLYFYKTKEDVDYFI
        +    +++GHHC QPL + LNVSS+A+ S Y Y TKEDVD  I
Subjt:  SRSTTIKSGHHCVQPLHRALNVSSSAQTSLYFYKTKEDVDYFI

Q93WX6 Cysteine desulfurase 1, chloroplastic4.9e-0971.05Show/hide
Query:  IKSGHHCVQPLHRALNVSSSAQTSLYFYKTKEDVDYFI
        I+SGHHC QPLHR L V++SA+ SLYFY TK+DVD FI
Subjt:  IKSGHHCVQPLHRALNVSSSAQTSLYFYKTKEDVDYFI

Arabidopsis top hitse value%identityAlignment
AT1G08490.1 chloroplastic NIFS-like cysteine desulfurase3.5e-1071.05Show/hide
Query:  IKSGHHCVQPLHRALNVSSSAQTSLYFYKTKEDVDYFI
        I+SGHHC QPLHR L V++SA+ SLYFY TK+DVD FI
Subjt:  IKSGHHCVQPLHRALNVSSSAQTSLYFYKTKEDVDYFI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTGTTGATTATTTATCTGGGAACGGAATGCAAAAAAATCATAGTTATGAACTCCCACAACAAATGTTCAACATGCTGCACTGTGTTCTTTCAATATTGGAGACATTC
ATCCAACGGACATTGCAACATTTCTCGATCAACAACCATCAAATCAGGACATCACTGTGTGCAGCCCCTCCATCGGGCTCTCAATGTCAGCTCAAGTGCTCAAACTAGCC
TTTACTTCTACAAGACTAAAGAGGATGTGGACTACTTTATCCGACACTTTCAAGTAGAGAGATCCAGTAATACTGAACTCCTTTGTTTGATGGTCCACAACTCGAATTTA
ACCTTCTAG
mRNA sequenceShow/hide mRNA sequence
GGTATGATTTGATTTTTTTTCTGCAACTTCTATTCTTCCAATTGAAGAAGTAGTTGGCTTGGCACATCGTTTTGGGGCAAAAGTGCTTGTAGATGGGTGCCAGAGTGTTC
CACATATGGTTGTGGACGTCTAGGCACTTGATGCTAACTTTCTTGTTGCTTCTTCTTACAAGGCATCGGATTCTTGTAAGGAAAGATTTTTCTACTGTCTACAATGCCTT
CATTCTTAGGTATATCCTTCGAGAAGATAAGTTATGAAAATAAAACTGCATCAGTTCGTTTTTAGGAAGTCAGTATCTAATTTTCATATTTGGTCCTACATGGCTCTAAG
TGGTGGAGAGATGATCTCAAATGTATTTCTTGACAATTCCACATTTGCACAACCTCCTTCCAGATTTGAAGTTGGGCGCTGGCAATTGGAGAGGCAATTGGTTTGAGAGA
TGCTGTTGATTATTTATCTGGGAACGGAATGCAAAAAAATCATAGTTATGAACTCCCACAACAAATGTTCAACATGCTGCACTGTGTTCTTTCAATATTGGAGACATTCA
TCCAACGGACATTGCAACATTTCTCGATCAACAACCATCAAATCAGGACATCACTGTGTGCAGCCCCTCCATCGGGCTCTCAATGTCAGCTCAAGTGCTCAAACTAGCCT
TTACTTCTACAAGACTAAAGAGGATGTGGACTACTTTATCCGACACTTTCAAGTAGAGAGATCCAGTAATACTGAACTCCTTTGTTTGATGGTCCACAACTCGAATTTAA
CCTTCTAGACTGCAAGGATTATGATATGTTTCTCGCTCTAAAGAAGATCGTCTTTGTGTTATCTTCAGCGTCACATTTACTACAAGATCCTTGTGCATATAGTTTTCTTG
TAAGACCGTAGATTTCTCATAGTTTTTTAAGACTTTAGTGTACTTATAAATTACTTGATTAAGCAATGGTTTCATAGACTACATTTTCTCTCCATAATTATCGATGTATA
TATTGTCGACACTTACCTACCTTCGTTTGTTTTCAATACAGAAGTCTCAAATTCCCTGGATCAAAATTATAGTGACTCCTTGAACTAGTACGTGAGATTTGAATTCTTGC
TTAATT
Protein sequenceShow/hide protein sequence
MLLIIYLGTECKKIIVMNSHNKCSTCCTVFFQYWRHSSNGHCNISRSTTIKSGHHCVQPLHRALNVSSSAQTSLYFYKTKEDVDYFIRHFQVERSSNTELLCLMVHNSNL
TF