| GenBank top hits | e value | %identity | Alignment |
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| PKU68501.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Dendrobium catenatum] | 8.9e-30 | 48.3 | Show/hide |
Query: AKQEHSSLWNFRLGHPTPRILSSILSRIGLSLSHSLSTYNCTSCLKAKIKKLHFPISLSTSLTPLALFHSDVWGLSPIISSNENRYYVCLIDNFSKFTWL
A S W+ RLGHP P++L+SI S+ L+ S S + C++C AK KL FP+S +++TPLAL H DVWG +P IS +YY+ +ID+FS+FTWL
Subjt: AKQEHSSLWNFRLGHPTPRILSSILSRIGLSLSHSLSTYNCTSCLKAKIKKLHFPISLSTSLTPLALFHSDVWGLSPIISSNENRYYVCLIDNFSKFTWL
Query: FPIAYKSDVPSIMQKFVSFTETQLSQNIKVFRSNGGGEFCNNSLQSF
F + KS+VP I+ F F E QLS IK +++GG EF NN L+SF
Subjt: FPIAYKSDVPSIMQKFVSFTETQLSQNIKVFRSNGGGEFCNNSLQSF
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| PKU80388.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Dendrobium catenatum] | 6.4e-28 | 49.28 | Show/hide |
Query: WNFRLGHPTPRILSSILSRIGLSLSHSLSTYNCTSCLKAKIKKLHFPISLSTSLTPLALFHSDVWGLSPIISSNENRYYVCLIDNFSKFTWLFPIAYKSD
W+ RLGHP R+L + S+ L S ++++C SCL K KL F S ST+ PL L HSDVWG SP+ S RYYV +D+FS+F WLFP+ KSD
Subjt: WNFRLGHPTPRILSSILSRIGLSLSHSLSTYNCTSCLKAKIKKLHFPISLSTSLTPLALFHSDVWGLSPIISSNENRYYVCLIDNFSKFTWLFPIAYKSD
Query: VPSIMQKFVSFTETQLSQNIKVFRSNGGGEFCNNSLQS
VP+I FV F E Q ++ +KV R++GGGEF N+ QS
Subjt: VPSIMQKFVSFTETQLSQNIKVFRSNGGGEFCNNSLQS
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| PKU80502.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Dendrobium catenatum] | 1.1e-27 | 47.89 | Show/hide |
Query: SSLWNFRLGHPTPRILSSILSRIGLSLSHSLSTYNCTSCLKAKIKKLHFPISLSTSLTPLALFHSDVWGLSPIISSNENRYYVCLIDNFSKFTWLFPIAY
S++W+ RLGHP R+L SI S H+ +T C SCL K KL F IS + + PL L HSDVWG SP+ S RYY+ L+D++S+F WLFP+
Subjt: SSLWNFRLGHPTPRILSSILSRIGLSLSHSLSTYNCTSCLKAKIKKLHFPISLSTSLTPLALFHSDVWGLSPIISSNENRYYVCLIDNFSKFTWLFPIAY
Query: KSDVPSIMQKFVSFTETQLSQNIKVFRSNGGGEFCNNSLQSF
KSDV + ++FV+F E Q ++ +KV R++GGGEF N + QSF
Subjt: KSDVPSIMQKFVSFTETQLSQNIKVFRSNGGGEFCNNSLQSF
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| PKU85564.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Dendrobium catenatum] | 6.4e-28 | 47.89 | Show/hide |
Query: SSLWNFRLGHPTPRILSSILSRIGLSLSHSLSTYNCTSCLKAKIKKLHFPISLSTSLTPLALFHSDVWGLSPIISSNENRYYVCLIDNFSKFTWLFPIAY
+SLW+ RLGHP +IL +I ++ L S +CT+C++ K+ KL F IS S + TPL+L HSDVWG SPI S+N R++V +D+FS++TWLFPI +
Subjt: SSLWNFRLGHPTPRILSSILSRIGLSLSHSLSTYNCTSCLKAKIKKLHFPISLSTSLTPLALFHSDVWGLSPIISSNENRYYVCLIDNFSKFTWLFPIAY
Query: KSDVPSIMQKFVSFTETQLSQNIKVFRSNGGGEFCNNSLQSF
KS+V S F F E Q Q+IK+ R++GG EF N +++SF
Subjt: KSDVPSIMQKFVSFTETQLSQNIKVFRSNGGGEFCNNSLQSF
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| XP_022158189.1 uncharacterized protein LOC111024722 [Momordica charantia] | 2.1e-42 | 62.24 | Show/hide |
Query: SSLWNFRLGHPTPRILSSILSRIGLSLSHSLSTYNCTSCLKAKIKKLHFPISLSTSLTPLALFHSDVWGLSPIISSNENRYYVCLIDNFSKFTWLFPIAY
S LW+ RLGH +P+IL LS GLS+SHS +T CTSCLKAK+ KL FP+S S+S PL HSDVWG SP+IS RYYV L+DNFSKFTWLFPIA
Subjt: SSLWNFRLGHPTPRILSSILSRIGLSLSHSLSTYNCTSCLKAKIKKLHFPISLSTSLTPLALFHSDVWGLSPIISSNENRYYVCLIDNFSKFTWLFPIAY
Query: KSDVPSIMQKFVSFTETQLSQNIKVFRSNGGGEFCNNSLQSFF
KSDV +I+ KFV F E LS +K F SNGGGEF N+S+ S F
Subjt: KSDVPSIMQKFVSFTETQLSQNIKVFRSNGGGEFCNNSLQSFF
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| TrEMBL top hits | e value | %identity | Alignment |
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| A0A2I0VYL3 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 4.3e-30 | 48.3 | Show/hide |
Query: AKQEHSSLWNFRLGHPTPRILSSILSRIGLSLSHSLSTYNCTSCLKAKIKKLHFPISLSTSLTPLALFHSDVWGLSPIISSNENRYYVCLIDNFSKFTWL
A S W+ RLGHP P++L+SI S+ L+ S S + C++C AK KL FP+S +++TPLAL H DVWG +P IS +YY+ +ID+FS+FTWL
Subjt: AKQEHSSLWNFRLGHPTPRILSSILSRIGLSLSHSLSTYNCTSCLKAKIKKLHFPISLSTSLTPLALFHSDVWGLSPIISSNENRYYVCLIDNFSKFTWL
Query: FPIAYKSDVPSIMQKFVSFTETQLSQNIKVFRSNGGGEFCNNSLQSF
F + KS+VP I+ F F E QLS IK +++GG EF NN L+SF
Subjt: FPIAYKSDVPSIMQKFVSFTETQLSQNIKVFRSNGGGEFCNNSLQSF
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| A0A2I0WXK0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 3.1e-28 | 49.28 | Show/hide |
Query: WNFRLGHPTPRILSSILSRIGLSLSHSLSTYNCTSCLKAKIKKLHFPISLSTSLTPLALFHSDVWGLSPIISSNENRYYVCLIDNFSKFTWLFPIAYKSD
W+ RLGHP R+L + S+ L S ++++C SCL K KL F S ST+ PL L HSDVWG SP+ S RYYV +D+FS+F WLFP+ KSD
Subjt: WNFRLGHPTPRILSSILSRIGLSLSHSLSTYNCTSCLKAKIKKLHFPISLSTSLTPLALFHSDVWGLSPIISSNENRYYVCLIDNFSKFTWLFPIAYKSD
Query: VPSIMQKFVSFTETQLSQNIKVFRSNGGGEFCNNSLQS
VP+I FV F E Q ++ +KV R++GGGEF N+ QS
Subjt: VPSIMQKFVSFTETQLSQNIKVFRSNGGGEFCNNSLQS
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| A0A2I0WXW5 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 5.3e-28 | 47.89 | Show/hide |
Query: SSLWNFRLGHPTPRILSSILSRIGLSLSHSLSTYNCTSCLKAKIKKLHFPISLSTSLTPLALFHSDVWGLSPIISSNENRYYVCLIDNFSKFTWLFPIAY
S++W+ RLGHP R+L SI S H+ +T C SCL K KL F IS + + PL L HSDVWG SP+ S RYY+ L+D++S+F WLFP+
Subjt: SSLWNFRLGHPTPRILSSILSRIGLSLSHSLSTYNCTSCLKAKIKKLHFPISLSTSLTPLALFHSDVWGLSPIISSNENRYYVCLIDNFSKFTWLFPIAY
Query: KSDVPSIMQKFVSFTETQLSQNIKVFRSNGGGEFCNNSLQSF
KSDV + ++FV+F E Q ++ +KV R++GGGEF N + QSF
Subjt: KSDVPSIMQKFVSFTETQLSQNIKVFRSNGGGEFCNNSLQSF
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| A0A2I0XCF4 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 3.1e-28 | 47.89 | Show/hide |
Query: SSLWNFRLGHPTPRILSSILSRIGLSLSHSLSTYNCTSCLKAKIKKLHFPISLSTSLTPLALFHSDVWGLSPIISSNENRYYVCLIDNFSKFTWLFPIAY
+SLW+ RLGHP +IL +I ++ L S +CT+C++ K+ KL F IS S + TPL+L HSDVWG SPI S+N R++V +D+FS++TWLFPI +
Subjt: SSLWNFRLGHPTPRILSSILSRIGLSLSHSLSTYNCTSCLKAKIKKLHFPISLSTSLTPLALFHSDVWGLSPIISSNENRYYVCLIDNFSKFTWLFPIAY
Query: KSDVPSIMQKFVSFTETQLSQNIKVFRSNGGGEFCNNSLQSF
KS+V S F F E Q Q+IK+ R++GG EF N +++SF
Subjt: KSDVPSIMQKFVSFTETQLSQNIKVFRSNGGGEFCNNSLQSF
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| A0A6J1DYN6 uncharacterized protein LOC111024722 | 9.9e-43 | 62.24 | Show/hide |
Query: SSLWNFRLGHPTPRILSSILSRIGLSLSHSLSTYNCTSCLKAKIKKLHFPISLSTSLTPLALFHSDVWGLSPIISSNENRYYVCLIDNFSKFTWLFPIAY
S LW+ RLGH +P+IL LS GLS+SHS +T CTSCLKAK+ KL FP+S S+S PL HSDVWG SP+IS RYYV L+DNFSKFTWLFPIA
Subjt: SSLWNFRLGHPTPRILSSILSRIGLSLSHSLSTYNCTSCLKAKIKKLHFPISLSTSLTPLALFHSDVWGLSPIISSNENRYYVCLIDNFSKFTWLFPIAY
Query: KSDVPSIMQKFVSFTETQLSQNIKVFRSNGGGEFCNNSLQSFF
KSDV +I+ KFV F E LS +K F SNGGGEF N+S+ S F
Subjt: KSDVPSIMQKFVSFTETQLSQNIKVFRSNGGGEFCNNSLQSFF
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| SwissProt top hits | e value | %identity | Alignment |
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| P04146 Copia protein | 1.2e-08 | 27.38 | Show/hide |
Query: HLKILNFHA------KQEHSSLWNFRLGHPTPRIL-----SSILSRIGLSLSHSLSTYNCTSCLKAKIKKLHF-PISLSTSL-TPLALFHSDVWGLSPII
++ ++NF A + + LW+ R GH + L ++ S L + LS C CL K +L F + T + PL + HSDV G +
Subjt: HLKILNFHA------KQEHSSLWNFRLGHPTPRIL-----SSILSRIGLSLSHSLSTYNCTSCLKAKIKKLHF-PISLSTSL-TPLALFHSDVWGLSPII
Query: SSNENRYYVCLIDNFSKFTWLFPIAYKSDVPSIMQKFVSFTETQLSQNIKVFRSNGGGEFCNNSLQSF
+ ++ Y+V +D F+ + + I YKSDV S+ Q FV+ +E + + + G E+ +N ++ F
Subjt: SSNENRYYVCLIDNFSKFTWLFPIAYKSDVPSIMQKFVSFTETQLSQNIKVFRSNGGGEFCNNSLQSF
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.0e-12 | 29.29 | Show/hide |
Query: LWNFRLGHPTPRILSSILSRIGLSLSHSLSTYNCTSCLKAKIKKLHFPISLSTSLTPLALFHSDVWGLSPIISSNENRYYVCLIDNFSKFTWLFPIAYKS
LW+ R+GH + + L + + +S + + C CL K ++ F S L L L +SDV G I S N+Y+V ID+ S+ W++ + K
Subjt: LWNFRLGHPTPRILSSILSRIGLSLSHSLSTYNCTSCLKAKIKKLHFPISLSTSLTPLALFHSDVWGLSPIISSNENRYYVCLIDNFSKFTWLFPIAYKS
Query: DVPSIMQKFVSFTETQLSQNIKVFRSNGGGEFCNNSLQSF
V + QKF + E + + +K RS+ GGE+ + + +
Subjt: DVPSIMQKFVSFTETQLSQNIKVFRSNGGGEFCNNSLQSF
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 1.1e-22 | 42.14 | Show/hide |
Query: AKQEHSSLWNFRLGHPTPRILSSILSRIGLS-LSHSLSTYNCTSCLKAKIKKLHFPISLSTSLTPLALFHSDVWGLSPIISSNENRYYVCLIDNFSKFTW
+K HSS W+ RLGHP P IL+S++S LS L+ S +C+ CL K K+ F S S PL +SDVW SPI+S + RYYV +D+F+++TW
Subjt: AKQEHSSLWNFRLGHPTPRILSSILSRIGLS-LSHSLSTYNCTSCLKAKIKKLHFPISLSTSLTPLALFHSDVWGLSPIISSNENRYYVCLIDNFSKFTW
Query: LFPIAYKSDVPSIMQKFVSFTETQLSQNIKVFRSNGGGEF
L+P+ KS V F + E + I F S+ GGEF
Subjt: LFPIAYKSDVPSIMQKFVSFTETQLSQNIKVFRSNGGGEF
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 3.0e-20 | 40.71 | Show/hide |
Query: AKQEHSSLWNFRLGHPTPRILSSILSRIGLS-LSHSLSTYNCTSCLKAKIKKLHFPISLSTSLTPLALFHSDVWGLSPIISSNENRYYVCLIDNFSKFTW
+K HSS W+ RLGHP+ IL+S++S L L+ S +C+ C K K+ F S TS PL +SDVW SPI+S + RYYV +D+F+++TW
Subjt: AKQEHSSLWNFRLGHPTPRILSSILSRIGLS-LSHSLSTYNCTSCLKAKIKKLHFPISLSTSLTPLALFHSDVWGLSPIISSNENRYYVCLIDNFSKFTW
Query: LFPIAYKSDVPSIMQKFVSFTETQLSQNIKVFRSNGGGEF
L+P+ KS V F S E + I S+ GGEF
Subjt: LFPIAYKSDVPSIMQKFVSFTETQLSQNIKVFRSNGGGEF
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