; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc09g0249101 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc09g0249101
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionZinc finger BED domain-containing protein RICESLEEPER 3-like
Genome locationCMiso1.1chr09:14746050..14746490
RNA-Seq ExpressionCmc09g0249101
SyntenyCmc09g0249101
Gene Ontology termsGO:0009791 - post-embryonic development (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR008906 - HAT, C-terminal dimerisation domain
IPR012337 - Ribonuclease H-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038019.1 zinc finger BED domain-containing protein RICESLEEPER 3-like [Cucumis melo var. makuwa]1.5e-6697.73Show/hide
Query:  MGEDFVYDTIVEEFEDDSTTPFEQGSSEIDIYLLEANVRTEGDFDILQWWKMNSDRFEVLGHMARDILAILVSTVASESAFSTGGRVVDSSRCSLAPKTV
        +GEDFVYDTIVEEFEDDSTTPFEQGSSEIDIYLLEANVRTEGDFDILQWWKMNSDRFEVLGHMARDILAILVSTVASESAFS GGRV DSSRCSLAPKTV
Subjt:  MGEDFVYDTIVEEFEDDSTTPFEQGSSEIDIYLLEANVRTEGDFDILQWWKMNSDRFEVLGHMARDILAILVSTVASESAFSTGGRVVDSSRCSLAPKTV

Query:  EALICTQNWLNSDPIHLQFQHELEEASKFEEG
        EALICTQNWLNSDPIHLQFQHELEEASKFEEG
Subjt:  EALICTQNWLNSDPIHLQFQHELEEASKFEEG

TYK14363.1 zinc finger BED domain-containing protein RICESLEEPER 3-like [Cucumis melo var. makuwa]1.0e-6799.24Show/hide
Query:  MGEDFVYDTIVEEFEDDSTTPFEQGSSEIDIYLLEANVRTEGDFDILQWWKMNSDRFEVLGHMARDILAILVSTVASESAFSTGGRVVDSSRCSLAPKTV
        +GEDFVYDTIVEEFEDDSTTPFEQGSSEIDIYLLEANVRTEGDFDILQWWKMNSDRFEVLGHMARDILAILVSTVASESAFSTGGRVVDSSRCSLAPKTV
Subjt:  MGEDFVYDTIVEEFEDDSTTPFEQGSSEIDIYLLEANVRTEGDFDILQWWKMNSDRFEVLGHMARDILAILVSTVASESAFSTGGRVVDSSRCSLAPKTV

Query:  EALICTQNWLNSDPIHLQFQHELEEASKFEEG
        EALICTQNWLNSDPIHLQFQHELEEASKFEEG
Subjt:  EALICTQNWLNSDPIHLQFQHELEEASKFEEG

TYK16593.1 zinc finger BED domain-containing protein RICESLEEPER 3-like [Cucumis melo var. makuwa]5.5e-6697.73Show/hide
Query:  MGEDFVYDTIVEEFEDDSTTPFEQGSSEIDIYLLEANVRTEGDFDILQWWKMNSDRFEVLGHMARDILAILVSTVASESAFSTGGRVVDSSRCSLAPKTV
        +GEDFVYDTIVEEFEDDSTTPFEQGSSEIDIYLLEANVRTEGDFDILQWWKMNSDRFEVLG MARDILAI VSTVASESAFSTGGRVVDSSRCSLAPKTV
Subjt:  MGEDFVYDTIVEEFEDDSTTPFEQGSSEIDIYLLEANVRTEGDFDILQWWKMNSDRFEVLGHMARDILAILVSTVASESAFSTGGRVVDSSRCSLAPKTV

Query:  EALICTQNWLNSDPIHLQFQHELEEASKFEEG
        EALICTQNWLNSDPIHLQFQHELEEASKFEEG
Subjt:  EALICTQNWLNSDPIHLQFQHELEEASKFEEG

TYK20578.1 zinc finger BED domain-containing protein RICESLEEPER 3-like [Cucumis melo var. makuwa]5.5e-6697.73Show/hide
Query:  MGEDFVYDTIVEEFEDDSTTPFEQGSSEIDIYLLEANVRTEGDFDILQWWKMNSDRFEVLGHMARDILAILVSTVASESAFSTGGRVVDSSRCSLAPKTV
        +GEDFVYDTIVEEFEDDSTTPFEQGSSEIDIYLLEANVRTEGDFDILQWWKMNSDRFEVLG MARDILAI VSTVASESAFSTGGRVVDSSRCSLAPKTV
Subjt:  MGEDFVYDTIVEEFEDDSTTPFEQGSSEIDIYLLEANVRTEGDFDILQWWKMNSDRFEVLGHMARDILAILVSTVASESAFSTGGRVVDSSRCSLAPKTV

Query:  EALICTQNWLNSDPIHLQFQHELEEASKFEEG
        EALICTQNWLNSDPIHLQFQHELEEASKFEEG
Subjt:  EALICTQNWLNSDPIHLQFQHELEEASKFEEG

TYK23433.1 putative transposase [Cucumis melo var. makuwa]5.5e-6697.73Show/hide
Query:  MGEDFVYDTIVEEFEDDSTTPFEQGSSEIDIYLLEANVRTEGDFDILQWWKMNSDRFEVLGHMARDILAILVSTVASESAFSTGGRVVDSSRCSLAPKTV
        +GEDFVYDTIVEEFEDDSTTPFEQGSSEIDIYLLEANVRTEGDFDILQWWKMNSDRFEVLG MARDILAI VSTVASESAFSTGGRVVDSSRCSLAPKTV
Subjt:  MGEDFVYDTIVEEFEDDSTTPFEQGSSEIDIYLLEANVRTEGDFDILQWWKMNSDRFEVLGHMARDILAILVSTVASESAFSTGGRVVDSSRCSLAPKTV

Query:  EALICTQNWLNSDPIHLQFQHELEEASKFEEG
        EALICTQNWLNSDPIHLQFQHELEEASKFEEG
Subjt:  EALICTQNWLNSDPIHLQFQHELEEASKFEEG

TrEMBL top hitse value%identityAlignment
A0A5A7T9L0 Zinc finger BED domain-containing protein RICESLEEPER 3-like7.0e-6797.73Show/hide
Query:  MGEDFVYDTIVEEFEDDSTTPFEQGSSEIDIYLLEANVRTEGDFDILQWWKMNSDRFEVLGHMARDILAILVSTVASESAFSTGGRVVDSSRCSLAPKTV
        +GEDFVYDTIVEEFEDDSTTPFEQGSSEIDIYLLEANVRTEGDFDILQWWKMNSDRFEVLGHMARDILAILVSTVASESAFS GGRV DSSRCSLAPKTV
Subjt:  MGEDFVYDTIVEEFEDDSTTPFEQGSSEIDIYLLEANVRTEGDFDILQWWKMNSDRFEVLGHMARDILAILVSTVASESAFSTGGRVVDSSRCSLAPKTV

Query:  EALICTQNWLNSDPIHLQFQHELEEASKFEEG
        EALICTQNWLNSDPIHLQFQHELEEASKFEEG
Subjt:  EALICTQNWLNSDPIHLQFQHELEEASKFEEG

A0A5D3CR68 Zinc finger BED domain-containing protein RICESLEEPER 3-like4.9e-6899.24Show/hide
Query:  MGEDFVYDTIVEEFEDDSTTPFEQGSSEIDIYLLEANVRTEGDFDILQWWKMNSDRFEVLGHMARDILAILVSTVASESAFSTGGRVVDSSRCSLAPKTV
        +GEDFVYDTIVEEFEDDSTTPFEQGSSEIDIYLLEANVRTEGDFDILQWWKMNSDRFEVLGHMARDILAILVSTVASESAFSTGGRVVDSSRCSLAPKTV
Subjt:  MGEDFVYDTIVEEFEDDSTTPFEQGSSEIDIYLLEANVRTEGDFDILQWWKMNSDRFEVLGHMARDILAILVSTVASESAFSTGGRVVDSSRCSLAPKTV

Query:  EALICTQNWLNSDPIHLQFQHELEEASKFEEG
        EALICTQNWLNSDPIHLQFQHELEEASKFEEG
Subjt:  EALICTQNWLNSDPIHLQFQHELEEASKFEEG

A0A5D3CXI1 Zinc finger BED domain-containing protein RICESLEEPER 3-like2.7e-6697.73Show/hide
Query:  MGEDFVYDTIVEEFEDDSTTPFEQGSSEIDIYLLEANVRTEGDFDILQWWKMNSDRFEVLGHMARDILAILVSTVASESAFSTGGRVVDSSRCSLAPKTV
        +GEDFVYDTIVEEFEDDSTTPFEQGSSEIDIYLLEANVRTEGDFDILQWWKMNSDRFEVLG MARDILAI VSTVASESAFSTGGRVVDSSRCSLAPKTV
Subjt:  MGEDFVYDTIVEEFEDDSTTPFEQGSSEIDIYLLEANVRTEGDFDILQWWKMNSDRFEVLGHMARDILAILVSTVASESAFSTGGRVVDSSRCSLAPKTV

Query:  EALICTQNWLNSDPIHLQFQHELEEASKFEEG
        EALICTQNWLNSDPIHLQFQHELEEASKFEEG
Subjt:  EALICTQNWLNSDPIHLQFQHELEEASKFEEG

A0A5D3DAN8 Zinc finger BED domain-containing protein RICESLEEPER 3-like2.7e-6697.73Show/hide
Query:  MGEDFVYDTIVEEFEDDSTTPFEQGSSEIDIYLLEANVRTEGDFDILQWWKMNSDRFEVLGHMARDILAILVSTVASESAFSTGGRVVDSSRCSLAPKTV
        +GEDFVYDTIVEEFEDDSTTPFEQGSSEIDIYLLEANVRTEGDFDILQWWKMNSDRFEVLG MARDILAI VSTVASESAFSTGGRVVDSSRCSLAPKTV
Subjt:  MGEDFVYDTIVEEFEDDSTTPFEQGSSEIDIYLLEANVRTEGDFDILQWWKMNSDRFEVLGHMARDILAILVSTVASESAFSTGGRVVDSSRCSLAPKTV

Query:  EALICTQNWLNSDPIHLQFQHELEEASKFEEG
        EALICTQNWLNSDPIHLQFQHELEEASKFEEG
Subjt:  EALICTQNWLNSDPIHLQFQHELEEASKFEEG

A0A5D3DIL8 Putative transposase2.7e-6697.73Show/hide
Query:  MGEDFVYDTIVEEFEDDSTTPFEQGSSEIDIYLLEANVRTEGDFDILQWWKMNSDRFEVLGHMARDILAILVSTVASESAFSTGGRVVDSSRCSLAPKTV
        +GEDFVYDTIVEEFEDDSTTPFEQGSSEIDIYLLEANVRTEGDFDILQWWKMNSDRFEVLG MARDILAI VSTVASESAFSTGGRVVDSSRCSLAPKTV
Subjt:  MGEDFVYDTIVEEFEDDSTTPFEQGSSEIDIYLLEANVRTEGDFDILQWWKMNSDRFEVLGHMARDILAILVSTVASESAFSTGGRVVDSSRCSLAPKTV

Query:  EALICTQNWLNSDPIHLQFQHELEEASKFEEG
        EALICTQNWLNSDPIHLQFQHELEEASKFEEG
Subjt:  EALICTQNWLNSDPIHLQFQHELEEASKFEEG

SwissProt top hitse value%identityAlignment
P03010 Putative AC9 transposase9.0e-1945.61Show/hide
Query:  DFVYDTIVEEFEDD------STTPFEQ-GSSEIDIYLLEANVRTEGDFDILQWWKMNSDRFEVLGHMARDILAILVSTVASESAFSTGGRVVDSSRCSLA
        D + DT++E  +D+          ++Q  S+E+D Y+ E  ++  G FDIL WW+     + +L  +ARD+LAI VSTVASESAFS GGRVVD  R  L 
Subjt:  DFVYDTIVEEFEDD------STTPFEQ-GSSEIDIYLLEANVRTEGDFDILQWWKMNSDRFEVLGHMARDILAILVSTVASESAFSTGGRVVDSSRCSLA

Query:  PKTVEALICTQNWL
         + VEALICT++W+
Subjt:  PKTVEALICTQNWL

P08770 Putative AC transposase9.0e-1945.61Show/hide
Query:  DFVYDTIVEEFEDD------STTPFEQ-GSSEIDIYLLEANVRTEGDFDILQWWKMNSDRFEVLGHMARDILAILVSTVASESAFSTGGRVVDSSRCSLA
        D + DT++E  +D+          ++Q  S+E+D Y+ E  ++  G FDIL WW+     + +L  +ARD+LAI VSTVASESAFS GGRVVD  R  L 
Subjt:  DFVYDTIVEEFEDD------STTPFEQ-GSSEIDIYLLEANVRTEGDFDILQWWKMNSDRFEVLGHMARDILAILVSTVASESAFSTGGRVVDSSRCSLA

Query:  PKTVEALICTQNWL
         + VEALICT++W+
Subjt:  PKTVEALICTQNWL

Q0JMB2 Zinc finger BED domain-containing protein RICESLEEPER 41.7e-1441.41Show/hide
Query:  TTPFEQGSSEIDIYLLEANVRTEGDFDILQWWKMNSDRFEVLGHMARDILAILVSTVASESAF---STGGRVVDSSRCSLAPKTVEALICTQNWLNSDP
        TT  +    E+++YL EA  +   DFD+L+WW+ N+ ++  L  MARD+LAI +STV   S+      G R +D  R SL P+ VEAL+C ++WL   P
Subjt:  TTPFEQGSSEIDIYLLEANVRTEGDFDILQWWKMNSDRFEVLGHMARDILAILVSTVASESAF---STGGRVVDSSRCSLAPKTVEALICTQNWLNSDP

Q6AVI0 Zinc finger BED domain-containing protein RICESLEEPER 21.3e-1449.45Show/hide
Query:  SEIDIYLLEANVRTEGDFDILQWWKMNSDRFEVLGHMARDILAILVSTVAS-ESAFS--TGGRVVDSSRCSLAPKTVEALICTQNWLNSDP
        SE++ YL E+      +FDIL WWK+N+ +F  L  MARDILAI +S V+S  S FS  TG R++D  R SL P+ VEAL+C ++WL   P
Subjt:  SEIDIYLLEANVRTEGDFDILQWWKMNSDRFEVLGHMARDILAILVSTVAS-ESAFS--TGGRVVDSSRCSLAPKTVEALICTQNWLNSDP

Q75HY5 Zinc finger BED domain-containing protein RICESLEEPER 35.4e-1647.83Show/hide
Query:  SEIDIYLLEANVRTEGDFDILQWWKMNSDRFEVLGHMARDILAILVSTVASE----SAFSTGGRVVDSSRCSLAPKTVEALICTQNWLNSDP
        SE++ YL EA +    DF+IL+WWK+N+ +F  L  MARD+LAI +S V+S     SA +TG +++D  R SL P+TVEAL C ++WL   P
Subjt:  SEIDIYLLEANVRTEGDFDILQWWKMNSDRFEVLGHMARDILAILVSTVASE----SAFSTGGRVVDSSRCSLAPKTVEALICTQNWLNSDP

Arabidopsis top hitse value%identityAlignment
AT1G18560.1 BED zinc finger ;hAT family dimerisation domain1.3e-0932.94Show/hide
Query:  EIDIYLLEANVRTEGDFDILQWWKMNSDRFEVLGHMARDILAILVSTVASESAFSTGGRVVDSSRCSLAPKTVEALICTQNWLNS
        E+  YL E+ V  +   D+L WWK+NS R+  L +MARD LA+  ++ A E  F   G  +D  +  +   + +++IC ++W+ +
Subjt:  EIDIYLLEANVRTEGDFDILQWWKMNSDRFEVLGHMARDILAILVSTVASESAFSTGGRVVDSSRCSLAPKTVEALICTQNWLNS

AT3G42170.1 BED zinc finger ;hAT family dimerisation domain6.2e-1541.35Show/hide
Query:  YDTIVEEFEDDSTTPFEQGSSEIDIYLLEANVRTEGDFDILQWWKMNSDRFEVLGHMARDILAILVSTVASESAFSTGGRVVDSSRCSLAPKTVEALICT
        +DT + E      T  +   SE+D YL E  +    +FD+L WWK N  ++  L  MARDIL+I VS  A +  F    R +D  + SL P+TVEALIC 
Subjt:  YDTIVEEFEDDSTTPFEQGSSEIDIYLLEANVRTEGDFDILQWWKMNSDRFEVLGHMARDILAILVSTVASESAFSTGGRVVDSSRCSLAPKTVEALICT

Query:  QNWL
        + WL
Subjt:  QNWL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTGAAGATTTTGTCTACGACACAATTGTTGAGGAATTTGAAGATGATTCTACTACACCTTTCGAACAGGGATCATCGGAGATTGATATCTATTTGTTGGAAGCCAA
TGTTAGGACCGAAGGTGATTTTGACATACTACAGTGGTGGAAGATGAACAGTGATCGATTTGAGGTTCTTGGTCATATGGCTAGAGATATTTTGGCTATTTTAGTTTCTA
CTGTAGCGTCTGAGTCAGCTTTTAGTACTGGAGGACGTGTTGTTGACTCATCACGCTGCTCATTGGCTCCTAAAACAGTGGAGGCTCTCATATGTACTCAAAATTGGCTA
AATTCTGATCCAATACATCTTCAATTTCAACATGAATTGGAAGAGGCTTCAAAATTTGAAGAAGGTATTTTCAAATCTTTACATGATATCTTTTGTAGTTGTAATGTGTA
A
mRNA sequenceShow/hide mRNA sequence
ATGGGTGAAGATTTTGTCTACGACACAATTGTTGAGGAATTTGAAGATGATTCTACTACACCTTTCGAACAGGGATCATCGGAGATTGATATCTATTTGTTGGAAGCCAA
TGTTAGGACCGAAGGTGATTTTGACATACTACAGTGGTGGAAGATGAACAGTGATCGATTTGAGGTTCTTGGTCATATGGCTAGAGATATTTTGGCTATTTTAGTTTCTA
CTGTAGCGTCTGAGTCAGCTTTTAGTACTGGAGGACGTGTTGTTGACTCATCACGCTGCTCATTGGCTCCTAAAACAGTGGAGGCTCTCATATGTACTCAAAATTGGCTA
AATTCTGATCCAATACATCTTCAATTTCAACATGAATTGGAAGAGGCTTCAAAATTTGAAGAAGGTATTTTCAAATCTTTACATGATATCTTTTGTAGTTGTAATGTGTA
A
Protein sequenceShow/hide protein sequence
MGEDFVYDTIVEEFEDDSTTPFEQGSSEIDIYLLEANVRTEGDFDILQWWKMNSDRFEVLGHMARDILAILVSTVASESAFSTGGRVVDSSRCSLAPKTVEALICTQNWL
NSDPIHLQFQHELEEASKFEEGIFKSLHDIFCSCNV