; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc09g0249331 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc09g0249331
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionTy1-copia retrotransposon protein
Genome locationCMiso1.1chr09:15097765..15098412
RNA-Seq ExpressionCmc09g0249331
SyntenyCmc09g0249331
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR013103 - Reverse transcriptase, RNA-dependent DNA polymerase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036644.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]3.1e-9791.67Show/hide
Query:  MKDLGEADVILGVKIKKNKTSLSLCQSHYMEKILKKFDSFDVSLVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNYTRPDIAYAISRLSRYTHNP
        MKDLGEADVILGVKI+KNKTSLSLCQSHY+EKILKKFDSFDVS VRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNYTRPDIAYA+SRLSRYTHNP
Subjt:  MKDLGEADVILGVKIKKNKTSLSLCQSHYMEKILKKFDSFDVSLVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNYTRPDIAYAISRLSRYTHNP

Query:  DRYHWDALRHLLRYLKGTIDYCLHFNKFSVILEGYCDANWVIDNDEVSSTSGYVFLLGGGAISWKSSKQTCIARSTMEFEFIALELAGHKAE
        +RYHWDALRHLLRYLKGTIDYCLHF KF  +LEGYCDANWV DNDEV+STSGYVFLLGG AISWKS+KQTCIARSTME EFIALELAG +AE
Subjt:  DRYHWDALRHLLRYLKGTIDYCLHFNKFSVILEGYCDANWVIDNDEVSSTSGYVFLLGGGAISWKSSKQTCIARSTMEFEFIALELAGHKAE

KAA0048276.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa]5.2e-9792.59Show/hide
Query:  LGEADVILGVKIKKNKTSLSLCQSHYMEKILKKFDSFDVSLVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNYTRPDIAYAISRLSRYTHNPDRY
        LGEADVILGVKI+KNKTSLSLCQSHY+EKILKKFDSFDVS VRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNYTRPDIAYA+SRLSRYTHNP+RY
Subjt:  LGEADVILGVKIKKNKTSLSLCQSHYMEKILKKFDSFDVSLVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNYTRPDIAYAISRLSRYTHNPDRY

Query:  HWDALRHLLRYLKGTIDYCLHFNKFSVILEGYCDANWVIDNDEVSSTSGYVFLLGGGAISWKSSKQTCIARSTMEFEFIALELAGHKAE
        HWDALRHLLRYLKGTIDYCLHFNKF  +LEGYCDANWVIDNDEV+STSGYVFLLGGGAISWKS+KQTCIAR TME EFIALELAG +AE
Subjt:  HWDALRHLLRYLKGTIDYCLHFNKFSVILEGYCDANWVIDNDEVSSTSGYVFLLGGGAISWKSSKQTCIARSTMEFEFIALELAGHKAE

KAA0049695.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]2.3e-10590.87Show/hide
Query:  MELITDTKLFLSSHFEMKDLGEADVILGVKIKKNKTSLSLCQSHYMEKILKKFDSFDVSLVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNYTRP
        MEL+TDTK FLSSHFEMKDLGEADVILGVKI+KNKTSLSLCQSHY+EKILKKFD FDVS VRTPFDASKHL KNKGDSVSQPEYAKIIGSVMYLMNYTRP
Subjt:  MELITDTKLFLSSHFEMKDLGEADVILGVKIKKNKTSLSLCQSHYMEKILKKFDSFDVSLVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNYTRP

Query:  DIAYAISRLSRYTHNPDRYHWDALRHLLRYLKGTIDYCLHFNKFSVILEGYCDANWVIDNDEVSSTSGYVFLLGGGAISWKSSKQTCIARSTMEFEFIAL
        DIAYA+SRLSRYTHNPDRYHWD LRHLLRYLKGTIDYCL+FNKF  +LEGYCDANWV DNDEV+STSGYVFLLGGGAISWKS+KQTCIARSTME EFIAL
Subjt:  DIAYAISRLSRYTHNPDRYHWDALRHLLRYLKGTIDYCLHFNKFSVILEGYCDANWVIDNDEVSSTSGYVFLLGGGAISWKSSKQTCIARSTMEFEFIAL

Query:  ELAGHKAE
        ELAG +AE
Subjt:  ELAGHKAE

TYK06518.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa]6.3e-11192.56Show/hide
Query:  MLIFGTNMELITDTKLFLSSHFEMKDLGEADVILGVKIKKNKTSLSLCQSHYMEKILKKFDSFDVSLVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMY
        MLIFGTNMELITDTK FLSSHFEMKDLGEADVILGVKI+KNKTSLSLCQSHY+EKILKKFDSFDVS VRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMY
Subjt:  MLIFGTNMELITDTKLFLSSHFEMKDLGEADVILGVKIKKNKTSLSLCQSHYMEKILKKFDSFDVSLVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMY

Query:  LMNYTRPDIAYAISRLSRYTHNPDRYHWDALRHLLRYLKGTIDYCLHFNKFSVILEGYCDANWVIDNDEVSSTSGYVFLLGGGAISWKSSKQTCIARSTM
        LMNYTRPDIAYA+SRLSRYTHNP+RYHWDALRHLLRYLKGTIDYCLHF KF  +LEGYCDANWV DNDEV+STSGYVFLLGGGAISWKS+KQTCIARSTM
Subjt:  LMNYTRPDIAYAISRLSRYTHNPDRYHWDALRHLLRYLKGTIDYCLHFNKFSVILEGYCDANWVIDNDEVSSTSGYVFLLGGGAISWKSSKQTCIARSTM

Query:  EFEFIALELAGHKAE
        E EFIALELAG +AE
Subjt:  EFEFIALELAGHKAE

TYK07981.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa]5.2e-9792.59Show/hide
Query:  LGEADVILGVKIKKNKTSLSLCQSHYMEKILKKFDSFDVSLVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNYTRPDIAYAISRLSRYTHNPDRY
        LGEADVILGVKI+KNKTSLSLCQSHY+EKILKKFDSFDVS VRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNYTRPDIAYA+SRLSRYTHNP+RY
Subjt:  LGEADVILGVKIKKNKTSLSLCQSHYMEKILKKFDSFDVSLVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNYTRPDIAYAISRLSRYTHNPDRY

Query:  HWDALRHLLRYLKGTIDYCLHFNKFSVILEGYCDANWVIDNDEVSSTSGYVFLLGGGAISWKSSKQTCIARSTMEFEFIALELAGHKAE
        HWDALRHLLRYLKGTIDYCLHFNKF  +LEGYCDANWV DNDEV+STSGYVFLLGGGAISWKS+KQTCIARSTME EFIALELAG +AE
Subjt:  HWDALRHLLRYLKGTIDYCLHFNKFSVILEGYCDANWVIDNDEVSSTSGYVFLLGGGAISWKSSKQTCIARSTMEFEFIALELAGHKAE

TrEMBL top hitse value%identityAlignment
A0A5A7SZD1 Retrovirus-related Pol polyprotein from transposon TNT 1-941.5e-9791.67Show/hide
Query:  MKDLGEADVILGVKIKKNKTSLSLCQSHYMEKILKKFDSFDVSLVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNYTRPDIAYAISRLSRYTHNP
        MKDLGEADVILGVKI+KNKTSLSLCQSHY+EKILKKFDSFDVS VRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNYTRPDIAYA+SRLSRYTHNP
Subjt:  MKDLGEADVILGVKIKKNKTSLSLCQSHYMEKILKKFDSFDVSLVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNYTRPDIAYAISRLSRYTHNP

Query:  DRYHWDALRHLLRYLKGTIDYCLHFNKFSVILEGYCDANWVIDNDEVSSTSGYVFLLGGGAISWKSSKQTCIARSTMEFEFIALELAGHKAE
        +RYHWDALRHLLRYLKGTIDYCLHF KF  +LEGYCDANWV DNDEV+STSGYVFLLGG AISWKS+KQTCIARSTME EFIALELAG +AE
Subjt:  DRYHWDALRHLLRYLKGTIDYCLHFNKFSVILEGYCDANWVIDNDEVSSTSGYVFLLGGGAISWKSSKQTCIARSTMEFEFIALELAGHKAE

A0A5A7U221 Ty1-copia retrotransposon protein2.5e-9792.59Show/hide
Query:  LGEADVILGVKIKKNKTSLSLCQSHYMEKILKKFDSFDVSLVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNYTRPDIAYAISRLSRYTHNPDRY
        LGEADVILGVKI+KNKTSLSLCQSHY+EKILKKFDSFDVS VRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNYTRPDIAYA+SRLSRYTHNP+RY
Subjt:  LGEADVILGVKIKKNKTSLSLCQSHYMEKILKKFDSFDVSLVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNYTRPDIAYAISRLSRYTHNPDRY

Query:  HWDALRHLLRYLKGTIDYCLHFNKFSVILEGYCDANWVIDNDEVSSTSGYVFLLGGGAISWKSSKQTCIARSTMEFEFIALELAGHKAE
        HWDALRHLLRYLKGTIDYCLHFNKF  +LEGYCDANWVIDNDEV+STSGYVFLLGGGAISWKS+KQTCIAR TME EFIALELAG +AE
Subjt:  HWDALRHLLRYLKGTIDYCLHFNKFSVILEGYCDANWVIDNDEVSSTSGYVFLLGGGAISWKSSKQTCIARSTMEFEFIALELAGHKAE

A0A5A7U7W6 Retrovirus-related Pol polyprotein from transposon TNT 1-941.1e-10590.87Show/hide
Query:  MELITDTKLFLSSHFEMKDLGEADVILGVKIKKNKTSLSLCQSHYMEKILKKFDSFDVSLVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNYTRP
        MEL+TDTK FLSSHFEMKDLGEADVILGVKI+KNKTSLSLCQSHY+EKILKKFD FDVS VRTPFDASKHL KNKGDSVSQPEYAKIIGSVMYLMNYTRP
Subjt:  MELITDTKLFLSSHFEMKDLGEADVILGVKIKKNKTSLSLCQSHYMEKILKKFDSFDVSLVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNYTRP

Query:  DIAYAISRLSRYTHNPDRYHWDALRHLLRYLKGTIDYCLHFNKFSVILEGYCDANWVIDNDEVSSTSGYVFLLGGGAISWKSSKQTCIARSTMEFEFIAL
        DIAYA+SRLSRYTHNPDRYHWD LRHLLRYLKGTIDYCL+FNKF  +LEGYCDANWV DNDEV+STSGYVFLLGGGAISWKS+KQTCIARSTME EFIAL
Subjt:  DIAYAISRLSRYTHNPDRYHWDALRHLLRYLKGTIDYCLHFNKFSVILEGYCDANWVIDNDEVSSTSGYVFLLGGGAISWKSSKQTCIARSTMEFEFIAL

Query:  ELAGHKAE
        ELAG +AE
Subjt:  ELAGHKAE

A0A5D3C5T2 Ty1-copia retrotransposon protein3.1e-11192.56Show/hide
Query:  MLIFGTNMELITDTKLFLSSHFEMKDLGEADVILGVKIKKNKTSLSLCQSHYMEKILKKFDSFDVSLVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMY
        MLIFGTNMELITDTK FLSSHFEMKDLGEADVILGVKI+KNKTSLSLCQSHY+EKILKKFDSFDVS VRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMY
Subjt:  MLIFGTNMELITDTKLFLSSHFEMKDLGEADVILGVKIKKNKTSLSLCQSHYMEKILKKFDSFDVSLVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMY

Query:  LMNYTRPDIAYAISRLSRYTHNPDRYHWDALRHLLRYLKGTIDYCLHFNKFSVILEGYCDANWVIDNDEVSSTSGYVFLLGGGAISWKSSKQTCIARSTM
        LMNYTRPDIAYA+SRLSRYTHNP+RYHWDALRHLLRYLKGTIDYCLHF KF  +LEGYCDANWV DNDEV+STSGYVFLLGGGAISWKS+KQTCIARSTM
Subjt:  LMNYTRPDIAYAISRLSRYTHNPDRYHWDALRHLLRYLKGTIDYCLHFNKFSVILEGYCDANWVIDNDEVSSTSGYVFLLGGGAISWKSSKQTCIARSTM

Query:  EFEFIALELAGHKAE
        E EFIALELAG +AE
Subjt:  EFEFIALELAGHKAE

A0A5D3C7Z8 Ty1-copia retrotransposon protein2.5e-9792.59Show/hide
Query:  LGEADVILGVKIKKNKTSLSLCQSHYMEKILKKFDSFDVSLVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNYTRPDIAYAISRLSRYTHNPDRY
        LGEADVILGVKI+KNKTSLSLCQSHY+EKILKKFDSFDVS VRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNYTRPDIAYA+SRLSRYTHNP+RY
Subjt:  LGEADVILGVKIKKNKTSLSLCQSHYMEKILKKFDSFDVSLVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNYTRPDIAYAISRLSRYTHNPDRY

Query:  HWDALRHLLRYLKGTIDYCLHFNKFSVILEGYCDANWVIDNDEVSSTSGYVFLLGGGAISWKSSKQTCIARSTMEFEFIALELAGHKAE
        HWDALRHLLRYLKGTIDYCLHFNKF  +LEGYCDANWV DNDEV+STSGYVFLLGGGAISWKS+KQTCIARSTME EFIALELAG +AE
Subjt:  HWDALRHLLRYLKGTIDYCLHFNKFSVILEGYCDANWVIDNDEVSSTSGYVFLLGGGAISWKSSKQTCIARSTMEFEFIALELAGHKAE

SwissProt top hitse value%identityAlignment
P04146 Copia protein1.0e-2634.15Show/hide
Query:  NMELITDTKLFLSSHFEMKDLGEADVILGVKIKKNKTSLSLCQSHYMEKILKKFDSFDVSLVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNYTR
        +M  + + K +L   F M DL E    +G++I+  +  + L QS Y++KIL KF+  + + V TP  +  + +    D         +IG +MY+M  TR
Subjt:  NMELITDTKLFLSSHFEMKDLGEADVILGVKIKKNKTSLSLCQSHYMEKILKKFDSFDVSLVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNYTR

Query:  PDIAYAISRLSRYTHNPDRYHWDALRHLLRYLKGTIDYCLHFNK---FSVILEGYCDANWVIDNDEVSSTSGYVF-LLGGGAISWKSSKQTCIARSTMEF
        PD+  A++ LSRY+   +   W  L+ +LRYLKGTID  L F K   F   + GY D++W     +  ST+GY+F +     I W + +Q  +A S+ E 
Subjt:  PDIAYAISRLSRYTHNPDRYHWDALRHLLRYLKGTIDYCLHFNK---FSVILEGYCDANWVIDNDEVSSTSGYVF-LLGGGAISWKSSKQTCIARSTMEF

Query:  EFIAL
        E++AL
Subjt:  EFIAL

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-942.7e-4043.44Show/hide
Query:  MLIFGTNMELITDTKLFLSSHFEMKDLGEADVILGVKIKKNKTS--LSLCQSHYMEKILKKFDSFDVSLVRTPFDASKHLKK--------NKGDSVSQPE
        MLI G +  LI   K  LS  F+MKDLG A  ILG+KI + +TS  L L Q  Y+E++L++F+  +   V TP      L K         KG+    P 
Subjt:  MLIFGTNMELITDTKLFLSSHFEMKDLGEADVILGVKIKKNKTS--LSLCQSHYMEKILKKFDSFDVSLVRTPFDASKHLKK--------NKGDSVSQPE

Query:  YAKIIGSVMYLMNYTRPDIAYAISRLSRYTHNPDRYHWDALRHLLRYLKGTIDYCLHFNKFSVILEGYCDANWVIDNDEVSSTSGYVFLLGGGAISWKSS
        Y+  +GS+MY M  TRPDIA+A+  +SR+  NP + HW+A++ +LRYL+GT   CL F     IL+GY DA+   D D   S++GY+F   GGAISW+S 
Subjt:  YAKIIGSVMYLMNYTRPDIAYAISRLSRYTHNPDRYHWDALRHLLRYLKGTIDYCLHFNKFSVILEGYCDANWVIDNDEVSSTSGYVFLLGGGAISWKSS

Query:  KQTCIARSTMEFEFIALELAG
         Q C+A ST E E+IA    G
Subjt:  KQTCIARSTMEFEFIALELAG

P92519 Uncharacterized mitochondrial protein AtMg008105.9e-2733.33Show/hide
Query:  MLIFGTNMELITDTKLFLSSHFEMKDLGEADVILGVKIKKNKTSLSLCQSHYMEKILKKFDSFDVSLVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMY
        +L+ G++  L+      LSS F MKDLG     LG++IK + + L L Q+ Y E+IL      D   + TP     +   +        ++  I+G++ Y
Subjt:  MLIFGTNMELITDTKLFLSSHFEMKDLGEADVILGVKIKKNKTSLSLCQSHYMEKILKKFDSFDVSLVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMY

Query:  LMNYTRPDIAYAISRLSRYTHNPDRYHWDALRHLLRYLKGTIDYCLHFNKFSVI-LEGYCDANWVIDNDEVSSTSGYVFLLGGGAISWKSSKQTCIARST
        L   TRPDI+YA++ + +  H P    +D L+ +LRY+KGTI + L+ +K S + ++ +CD++W        ST+G+   LG   ISW + +Q  ++RS+
Subjt:  LMNYTRPDIAYAISRLSRYTHNPDRYHWDALRHLLRYLKGTIDYCLHFNKFSVI-LEGYCDANWVIDNDEVSSTSGYVFLLGGGAISWKSSKQTCIARST

Query:  MEFEFIALEL
         E E+ AL L
Subjt:  MEFEFIALEL

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE13.0e-3138.35Show/hide
Query:  MLIFGTNMELITDTKLFLSSHFEMKDLGEADVILGVKIKKNKTSLSLCQSHYMEKILKKFDSFDVSLVRTPFDASKHLKKNKGDSVSQP-EYAKIIGSVM
        +LI G +  L+ +T   LS  F +KD  E    LG++ K+  T L L Q  Y+  +L + +      V TP   S  L    G  ++ P EY  I+GS+ 
Subjt:  MLIFGTNMELITDTKLFLSSHFEMKDLGEADVILGVKIKKNKTSLSLCQSHYMEKILKKFDSFDVSLVRTPFDASKHLKKNKGDSVSQP-EYAKIIGSVM

Query:  YLMNYTRPDIAYAISRLSRYTHNPDRYHWDALRHLLRYLKGTIDYCLHFNKFSVI-LEGYCDANWVIDNDEVSSTSGYVFLLGGGAISWKSSKQTCIARS
        YL  +TRPDI+YA++RLS++ H P   H  AL+ +LRYL GT ++ +   K + + L  Y DA+W  D D+  ST+GY+  LG   ISW S KQ  + RS
Subjt:  YLMNYTRPDIAYAISRLSRYTHNPDRYHWDALRHLLRYLKGTIDYCLHFNKFSVI-LEGYCDANWVIDNDEVSSTSGYVFLLGGGAISWKSSKQTCIARS

Query:  TMEFEF
        + E E+
Subjt:  TMEFEF

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE21.4e-3137.86Show/hide
Query:  MLIFGTNMELITDTKLFLSSHFEMKDLGEADVILGVKIKKNKTSLSLCQSHYMEKILKKFDSFDVSLVRTPFDASKHLKKNKGDSVSQP-EYAKIIGSVM
        +LI G +  L+  T   LS  F +K+  +    LG++ K+    L L Q  Y   +L + +      V TP   S  L  + G  +  P EY  I+GS+ 
Subjt:  MLIFGTNMELITDTKLFLSSHFEMKDLGEADVILGVKIKKNKTSLSLCQSHYMEKILKKFDSFDVSLVRTPFDASKHLKKNKGDSVSQP-EYAKIIGSVM

Query:  YLMNYTRPDIAYAISRLSRYTHNPDRYHWDALRHLLRYLKGTIDYCLHFNKFSVI-LEGYCDANWVIDNDEVSSTSGYVFLLGGGAISWKSSKQTCIARS
        YL  +TRPD++YA++RLS+Y H P   HW+AL+ +LRYL GT D+ +   K + + L  Y DA+W  D D+  ST+GY+  LG   ISW S KQ  + RS
Subjt:  YLMNYTRPDIAYAISRLSRYTHNPDRYHWDALRHLLRYLKGTIDYCLHFNKFSVI-LEGYCDANWVIDNDEVSSTSGYVFLLGGGAISWKSSKQTCIARS

Query:  TMEFEF
        + E E+
Subjt:  TMEFEF

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 87.4e-2531.6Show/hide
Query:  MLIFGTNMELITDTKLFLSSHFEMKDLGEADVILGVKIKKNKTSLSLCQSHYMEKILKKFDSFDVSLVRTPFDASKHLKKNK-GDSVSQPEYAKIIGSVM
        ++I   N   + + K  L S F+++DLG     LG++I ++   +++CQ  Y   +L +           P D S     +  GD V    Y ++IG +M
Subjt:  MLIFGTNMELITDTKLFLSSHFEMKDLGEADVILGVKIKKNKTSLSLCQSHYMEKILKKFDSFDVSLVRTPFDASKHLKKNK-GDSVSQPEYAKIIGSVM

Query:  YLMNYTRPDIAYAISRLSRYTHNPDRYHWDALRHLLRYLKGTIDYCLHF-NKFSVILEGYCDANWVIDNDEVSSTSGYVFLLGGGAISWKSSKQTCIARS
        YL   TR DI++A+++LS+++  P   H  A+  +L Y+KGT+   L + ++  + L+ + DA++    D   ST+GY   LG   ISWKS KQ  +++S
Subjt:  YLMNYTRPDIAYAISRLSRYTHNPDRYHWDALRHLLRYLKGTIDYCLHF-NKFSVILEGYCDANWVIDNDEVSSTSGYVFLLGGGAISWKSSKQTCIARS

Query:  TMEFEFIALELA
        + E E+ AL  A
Subjt:  TMEFEFIALELA

ATMG00240.1 Gag-Pol-related retrotransposon family protein2.9e-0531.33Show/hide
Query:  MYLMNYTRPDIAYAISRLSRYTHNPDRYHWDALRHLLRYLKGTIDYCLHFNKFSVI-LEGYCDANWVIDNDEVSSTSGYVFLL
        MYL   TRPD+ +A++RLS+++         A+  +L Y+KGT+   L ++  S + L+ + D++W    D   S +G+  L+
Subjt:  MYLMNYTRPDIAYAISRLSRYTHNPDRYHWDALRHLLRYLKGTIDYCLHFNKFSVI-LEGYCDANWVIDNDEVSSTSGYVFLL

ATMG00810.1 DNA/RNA polymerases superfamily protein4.2e-2833.33Show/hide
Query:  MLIFGTNMELITDTKLFLSSHFEMKDLGEADVILGVKIKKNKTSLSLCQSHYMEKILKKFDSFDVSLVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMY
        +L+ G++  L+      LSS F MKDLG     LG++IK + + L L Q+ Y E+IL      D   + TP     +   +        ++  I+G++ Y
Subjt:  MLIFGTNMELITDTKLFLSSHFEMKDLGEADVILGVKIKKNKTSLSLCQSHYMEKILKKFDSFDVSLVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMY

Query:  LMNYTRPDIAYAISRLSRYTHNPDRYHWDALRHLLRYLKGTIDYCLHFNKFSVI-LEGYCDANWVIDNDEVSSTSGYVFLLGGGAISWKSSKQTCIARST
        L   TRPDI+YA++ + +  H P    +D L+ +LRY+KGTI + L+ +K S + ++ +CD++W        ST+G+   LG   ISW + +Q  ++RS+
Subjt:  LMNYTRPDIAYAISRLSRYTHNPDRYHWDALRHLLRYLKGTIDYCLHFNKFSVI-LEGYCDANWVIDNDEVSSTSGYVFLLGGGAISWKSSKQTCIARST

Query:  MEFEFIALEL
         E E+ AL L
Subjt:  MEFEFIALEL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTAATCTTTGGAACAAACATGGAGTTAATAACTGATACTAAGTTATTTCTCTCATCACACTTTGAAATGAAAGACCTAGGAGAAGCAGACGTAATCCTAGGTGTTAA
AATCAAGAAAAACAAAACTAGTCTGTCTCTATGTCAATCTCACTACATGGAGAAAATACTAAAGAAGTTTGATTCCTTTGATGTTTCTCTAGTGAGAACTCCCTTTGACG
CTAGTAAACATCTTAAGAAGAATAAAGGAGATAGTGTGTCTCAACCTGAATATGCAAAGATCATAGGTAGTGTGATGTATTTAATGAATTACACTAGACCTGATATTGCA
TATGCTATCAGTAGATTAAGTAGATATACACATAATCCTGATAGATACCACTGGGATGCCTTACGCCATCTATTGAGATATCTTAAAGGGACGATTGATTACTGTTTACA
CTTCAACAAATTTTCTGTCATATTAGAAGGATATTGTGATGCAAACTGGGTCATAGATAATGATGAGGTTAGCTCCACTAGTGGGTATGTATTTTTGCTCGGAGGTGGAG
CAATATCTTGGAAGTCTTCAAAACAGACTTGTATAGCTAGATCCACAATGGAATTCGAGTTTATAGCATTAGAGTTGGCAGGACATAAGGCTGAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGTTAATCTTTGGAACAAACATGGAGTTAATAACTGATACTAAGTTATTTCTCTCATCACACTTTGAAATGAAAGACCTAGGAGAAGCAGACGTAATCCTAGGTGTTAA
AATCAAGAAAAACAAAACTAGTCTGTCTCTATGTCAATCTCACTACATGGAGAAAATACTAAAGAAGTTTGATTCCTTTGATGTTTCTCTAGTGAGAACTCCCTTTGACG
CTAGTAAACATCTTAAGAAGAATAAAGGAGATAGTGTGTCTCAACCTGAATATGCAAAGATCATAGGTAGTGTGATGTATTTAATGAATTACACTAGACCTGATATTGCA
TATGCTATCAGTAGATTAAGTAGATATACACATAATCCTGATAGATACCACTGGGATGCCTTACGCCATCTATTGAGATATCTTAAAGGGACGATTGATTACTGTTTACA
CTTCAACAAATTTTCTGTCATATTAGAAGGATATTGTGATGCAAACTGGGTCATAGATAATGATGAGGTTAGCTCCACTAGTGGGTATGTATTTTTGCTCGGAGGTGGAG
CAATATCTTGGAAGTCTTCAAAACAGACTTGTATAGCTAGATCCACAATGGAATTCGAGTTTATAGCATTAGAGTTGGCAGGACATAAGGCTGAGTAG
Protein sequenceShow/hide protein sequence
MLIFGTNMELITDTKLFLSSHFEMKDLGEADVILGVKIKKNKTSLSLCQSHYMEKILKKFDSFDVSLVRTPFDASKHLKKNKGDSVSQPEYAKIIGSVMYLMNYTRPDIA
YAISRLSRYTHNPDRYHWDALRHLLRYLKGTIDYCLHFNKFSVILEGYCDANWVIDNDEVSSTSGYVFLLGGGAISWKSSKQTCIARSTMEFEFIALELAGHKAE