| GenBank top hits | e value | %identity | Alignment |
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| CAJ65856.1 putative reverse transcriptase, partial [Cucumis melo] | 4.7e-33 | 93.51 | Show/hide |
Query: SLKEDLYMEQPKGFEAKGKIDLVCKLKKSLYGLKQSPRCWYKRFNDFINKIGFMRSLYDPYVYYKKLTDGSLIYLLL
SL+EDLYMEQPKGFEAKGKIDLVCKLKKSLYGLKQSPRCW KRF+DFINKIGFMRSLYDP VYYKKLT+GSLIYLLL
Subjt: SLKEDLYMEQPKGFEAKGKIDLVCKLKKSLYGLKQSPRCWYKRFNDFINKIGFMRSLYDPYVYYKKLTDGSLIYLLL
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| KAA0046197.1 retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 7.0e-45 | 83.64 | Show/hide |
Query: MDVTTTILHGSLKEDLYMEQPKGFEAKGKIDLVCKLKKSLYGLKQSPRCWYKRFNDFINKIGFMRSLYDPYVYYKKLTDGSLIYLLLYVNDMLLVGKNLT
MDVTTT LHGSL+ DLYMEQPKG +AKGK DLVCKLKKSLYGLKQSPR WYKRF+DFINKIGFMRSLYDP VYYKKLTDGSL+YLLLYV+DMLL GKNLT
Subjt: MDVTTTILHGSLKEDLYMEQPKGFEAKGKIDLVCKLKKSLYGLKQSPRCWYKRFNDFINKIGFMRSLYDPYVYYKKLTDGSLIYLLLYVNDMLLVGKNLT
Query: KLNKIKRTVE
KLN+I+ ++
Subjt: KLNKIKRTVE
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| KAA0047818.1 retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 1.3e-46 | 86.36 | Show/hide |
Query: MDVTTTILHGSLKEDLYMEQPKGFEAKGKIDLVCKLKKSLYGLKQSPRCWYKRFNDFINKIGFMRSLYDPYVYYKKLTDGSLIYLLLYVNDMLLVGKNLT
MDVT LHGSL+EDLYMEQPKGFEAKGKIDLVCKLKKSLYGLKQSPRCW KRF+DFINKIGFMRSLYDP VYYKKLT+GSLIYLLLYV+DMLL GKNLT
Subjt: MDVTTTILHGSLKEDLYMEQPKGFEAKGKIDLVCKLKKSLYGLKQSPRCWYKRFNDFINKIGFMRSLYDPYVYYKKLTDGSLIYLLLYVNDMLLVGKNLT
Query: KLNKIKRTVE
KLN+IK ++
Subjt: KLNKIKRTVE
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| TYK02789.1 retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 8.2e-46 | 88.68 | Show/hide |
Query: MDVTTTILHGSLKEDLYMEQPKGFEAKGKIDLVCKLKKSLYGLKQSPRCWYKRFNDFINKIGFMRSLYDPYVYYKKLTDGSLIYLLLYVNDMLLVGKNLT
MDVTTT LHGSL+EDLYMEQ KGFEAKGK DLVCKLKKSLYGLKQSPRCWYKRF+ FINKIGFMRSLYDP VYYKKLTDGSLIYLLLYV++MLL GKN T
Subjt: MDVTTTILHGSLKEDLYMEQPKGFEAKGKIDLVCKLKKSLYGLKQSPRCWYKRFNDFINKIGFMRSLYDPYVYYKKLTDGSLIYLLLYVNDMLLVGKNLT
Query: KLNKIK
KLN+IK
Subjt: KLNKIK
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| XP_008448404.1 PREDICTED: retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo] | 7.0e-45 | 84.55 | Show/hide |
Query: MDVTTTILHGSLKEDLYMEQPKGFEAKGKIDLVCKLKKSLYGLKQSPRCWYKRFNDFINKIGFMRSLYDPYVYYKKLTDGSLIYLLLYVNDMLLVGKNLT
MDVT LHGSL+EDLYMEQPKGFEAKGKIDLVCKLKKSLYGLKQSPRCW KRF+DFINKIGFM SLYDP V YKKLT+GSLIYLLLYV+DMLL GKNLT
Subjt: MDVTTTILHGSLKEDLYMEQPKGFEAKGKIDLVCKLKKSLYGLKQSPRCWYKRFNDFINKIGFMRSLYDPYVYYKKLTDGSLIYLLLYVNDMLLVGKNLT
Query: KLNKIKRTVE
KLN+IK ++
Subjt: KLNKIKRTVE
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A1S3BJM4 retrovirus-related Pol polyprotein from transposon TNT 1-94 | 3.4e-45 | 84.55 | Show/hide |
Query: MDVTTTILHGSLKEDLYMEQPKGFEAKGKIDLVCKLKKSLYGLKQSPRCWYKRFNDFINKIGFMRSLYDPYVYYKKLTDGSLIYLLLYVNDMLLVGKNLT
MDVT LHGSL+EDLYMEQPKGFEAKGKIDLVCKLKKSLYGLKQSPRCW KRF+DFINKIGFM SLYDP V YKKLT+GSLIYLLLYV+DMLL GKNLT
Subjt: MDVTTTILHGSLKEDLYMEQPKGFEAKGKIDLVCKLKKSLYGLKQSPRCWYKRFNDFINKIGFMRSLYDPYVYYKKLTDGSLIYLLLYVNDMLLVGKNLT
Query: KLNKIKRTVE
KLN+IK ++
Subjt: KLNKIKRTVE
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| A0A5A7TXZ9 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 6.1e-47 | 86.36 | Show/hide |
Query: MDVTTTILHGSLKEDLYMEQPKGFEAKGKIDLVCKLKKSLYGLKQSPRCWYKRFNDFINKIGFMRSLYDPYVYYKKLTDGSLIYLLLYVNDMLLVGKNLT
MDVT LHGSL+EDLYMEQPKGFEAKGKIDLVCKLKKSLYGLKQSPRCW KRF+DFINKIGFMRSLYDP VYYKKLT+GSLIYLLLYV+DMLL GKNLT
Subjt: MDVTTTILHGSLKEDLYMEQPKGFEAKGKIDLVCKLKKSLYGLKQSPRCWYKRFNDFINKIGFMRSLYDPYVYYKKLTDGSLIYLLLYVNDMLLVGKNLT
Query: KLNKIKRTVE
KLN+IK ++
Subjt: KLNKIKRTVE
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| A0A5D3BXB7 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 4.0e-46 | 88.68 | Show/hide |
Query: MDVTTTILHGSLKEDLYMEQPKGFEAKGKIDLVCKLKKSLYGLKQSPRCWYKRFNDFINKIGFMRSLYDPYVYYKKLTDGSLIYLLLYVNDMLLVGKNLT
MDVTTT LHGSL+EDLYMEQ KGFEAKGK DLVCKLKKSLYGLKQSPRCWYKRF+ FINKIGFMRSLYDP VYYKKLTDGSLIYLLLYV++MLL GKN T
Subjt: MDVTTTILHGSLKEDLYMEQPKGFEAKGKIDLVCKLKKSLYGLKQSPRCWYKRFNDFINKIGFMRSLYDPYVYYKKLTDGSLIYLLLYVNDMLLVGKNLT
Query: KLNKIK
KLN+IK
Subjt: KLNKIK
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| A0A5D3CT04 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 3.4e-45 | 83.64 | Show/hide |
Query: MDVTTTILHGSLKEDLYMEQPKGFEAKGKIDLVCKLKKSLYGLKQSPRCWYKRFNDFINKIGFMRSLYDPYVYYKKLTDGSLIYLLLYVNDMLLVGKNLT
MDVTTT LHGSL+ DLYMEQPKG +AKGK DLVCKLKKSLYGLKQSPR WYKRF+DFINKIGFMRSLYDP VYYKKLTDGSL+YLLLYV+DMLL GKNLT
Subjt: MDVTTTILHGSLKEDLYMEQPKGFEAKGKIDLVCKLKKSLYGLKQSPRCWYKRFNDFINKIGFMRSLYDPYVYYKKLTDGSLIYLLLYVNDMLLVGKNLT
Query: KLNKIKRTVE
KLN+I+ ++
Subjt: KLNKIKRTVE
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| A0A5D3CW25 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 3.4e-45 | 84.55 | Show/hide |
Query: MDVTTTILHGSLKEDLYMEQPKGFEAKGKIDLVCKLKKSLYGLKQSPRCWYKRFNDFINKIGFMRSLYDPYVYYKKLTDGSLIYLLLYVNDMLLVGKNLT
MDVT LHGSL+EDLYMEQPKGFEAKGKIDLVCKLKKSLYGLKQSPRCW KRF+DFINKIGFM SLYDP V YKKLT+GSLIYLLLYV+DMLL GKNLT
Subjt: MDVTTTILHGSLKEDLYMEQPKGFEAKGKIDLVCKLKKSLYGLKQSPRCWYKRFNDFINKIGFMRSLYDPYVYYKKLTDGSLIYLLLYVNDMLLVGKNLT
Query: KLNKIKRTVE
KLN+IK ++
Subjt: KLNKIKRTVE
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 6.4e-17 | 40.35 | Show/hide |
Query: MDVTTTILHGSLKEDLYMEQPKGFEAKGKIDLVCKLKKSLYGLKQSPRCWYKRFNDFINKIGFMRSLYDPYVYYKKLTDGSL---IYLLLYVNDMLLVGK
MDV T L+G+LKE++YM P+G D VCKL K++YGLKQ+ RCW++ F + + F+ S D +Y L G++ IY+LLYV+D+++
Subjt: MDVTTTILHGSLKEDLYMEQPKGFEAKGKIDLVCKLKKSLYGLKQSPRCWYKRFNDFINKIGFMRSLYDPYVYYKKLTDGSL---IYLLLYVNDMLLVGK
Query: NLTKLNKIKRTVEE
++T++N KR + E
Subjt: NLTKLNKIKRTVEE
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| P0C2J7 Transposon Ty4-H Gag-Pol polyprotein | 4.1e-08 | 30.7 | Show/hide |
Query: MDVTTTILHGSLKEDLYMEQPKGFEAKGKIDLVCKLKKSLYGLKQSPRCWYKRFNDFINKIGFMRSLYDPYVYYKKLTDGSLIYLLLYVNDMLLVGKNLT
+D+ L+ L+E++Y+ P V KL K+LYGLKQSP+ W ++N IG + Y P +Y T+ + + +YV+D ++ N
Subjt: MDVTTTILHGSLKEDLYMEQPKGFEAKGKIDLVCKLKKSLYGLKQSPRCWYKRFNDFINKIGFMRSLYDPYVYYKKLTDGSLIYLLLYVNDMLLVGKNLT
Query: KL----NKIKRTVE
+L NK+K E
Subjt: KL----NKIKRTVE
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 2.3e-27 | 51.89 | Show/hide |
Query: MDVTTTILHGSLKEDLYMEQPKGFEAKGKIDLVCKLKKSLYGLKQSPRCWYKRFNDFINKIGFMRSLYDPYVYYKKLTDGSLIYLLLYVNDMLLVGKNLT
+DV T LHG L+E++YMEQP+GFE GK +VCKL KSLYGLKQ+PR WY +F+ F+ ++++ DP VY+K+ ++ + I LLLYV+DML+VGK+
Subjt: MDVTTTILHGSLKEDLYMEQPKGFEAKGKIDLVCKLKKSLYGLKQSPRCWYKRFNDFINKIGFMRSLYDPYVYYKKLTDGSLIYLLLYVNDMLLVGKNLT
Query: KLNKIK
+ K+K
Subjt: KLNKIK
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 3.4e-18 | 41.75 | Show/hide |
Query: MDVTTTILHGSLKEDLYMEQPKGFEAKGKIDLVCKLKKSLYGLKQSPRCWYKRFNDFINKIGFMRSLYDPYVYYKKLTDGSLIYLLLYVNDMLLVGKNLT
+DV L G+L +D+YM QP GF K + + VCKL+K+LYGLKQ+PR WY +++ IGF+ S+ D ++ + S++Y+L+YV+D+L+ G + T
Subjt: MDVTTTILHGSLKEDLYMEQPKGFEAKGKIDLVCKLKKSLYGLKQSPRCWYKRFNDFINKIGFMRSLYDPYVYYKKLTDGSLIYLLLYVNDMLLVGKNLT
Query: KLN
L+
Subjt: KLN
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 2.9e-17 | 39.22 | Show/hide |
Query: MDVTTTILHGSLKEDLYMEQPKGFEAKGKIDLVCKLKKSLYGLKQSPRCWYKRFNDFINKIGFMRSLYDPYVYYKKLTDGSLIYLLLYVNDMLLVGKNLT
+DV L G+L +++YM QP GF K + D VC+L+K++YGLKQ+PR WY ++ +GF+ S+ D ++ + S+IY+L+YV+D+L+ G +
Subjt: MDVTTTILHGSLKEDLYMEQPKGFEAKGKIDLVCKLKKSLYGLKQSPRCWYKRFNDFINKIGFMRSLYDPYVYYKKLTDGSLIYLLLYVNDMLLVGKNLT
Query: KL
L
Subjt: KL
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