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Cmc09g0249531 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc09g0249531
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionTranscription factor TFIIIB component B''-like isoform X3
Genome locationCMiso1.1chr09:15450965..15452487
RNA-Seq ExpressionCmc09g0249531
SyntenyCmc09g0249531
Gene Ontology termsGO:0006457 - protein folding (biological process)
GO:0015074 - DNA integration (biological process)
GO:0070898 - RNA polymerase III preinitiation complex assembly (biological process)
GO:0098869 - cellular oxidant detoxification (biological process)
GO:0000126 - transcription factor TFIIIB complex (cellular component)
GO:0016272 - prefoldin complex (cellular component)
GO:0001156 - TFIIIC-class transcription factor complex binding (molecular function)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004601 - peroxidase activity (molecular function)
GO:0051082 - unfolded protein binding (molecular function)
InterPro domainsIPR039467 - Transcription factor TFIIIB component B'', Myb domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0066161.1 transcription factor TFIIIB component B''-like isoform X3 [Cucumis melo var. makuwa]1.1e-0992.11Show/hide
Query:  MIQQLFPSKTRRQIKLKFKSEKHHHPFRLSDAITNRAK
        MIQQLFP KTRRQIKLKFKSE+ HHPFRLSDAITNRAK
Subjt:  MIQQLFPSKTRRQIKLKFKSEKHHHPFRLSDAITNRAK
KAG6579077.1 hypothetical protein SDJN03_23525, partial [Cucurbita argyrosperma subsp. sororia]2.0e-0884.21Show/hide
Query:  MIQQLFPSKTRRQIKLKFKSEKHHHPFRLSDAITNRAK
        MIQQLFP +TR QIKLKFK+E+ HHPFRLSDAITNRAK
Subjt:  MIQQLFPSKTRRQIKLKFKSEKHHHPFRLSDAITNRAK
KAG7016602.1 hypothetical protein SDJN02_21712, partial [Cucurbita argyrosperma subsp. argyrosperma]2.0e-0884.21Show/hide
Query:  MIQQLFPSKTRRQIKLKFKSEKHHHPFRLSDAITNRAK
        MIQQLFP +TR QIKLKFK+E+ HHPFRLSDAITNRAK
Subjt:  MIQQLFPSKTRRQIKLKFKSEKHHHPFRLSDAITNRAK
TYK15203.1 peroxidase 64 [Cucumis melo var. makuwa]1.1e-0992.11Show/hide
Query:  MIQQLFPSKTRRQIKLKFKSEKHHHPFRLSDAITNRAK
        MIQQLFP KTRRQIKLKFKSE+ HHPFRLSDAITNRAK
Subjt:  MIQQLFPSKTRRQIKLKFKSEKHHHPFRLSDAITNRAK
XP_011655158.1 uncharacterized protein LOC101216268 [Cucumis sativus]1.1e-0992.11Show/hide
Query:  MIQQLFPSKTRRQIKLKFKSEKHHHPFRLSDAITNRAK
        MIQQLFP KTRRQIKLKFKSE+ HHPFRLSDAITNRAK
Subjt:  MIQQLFPSKTRRQIKLKFKSEKHHHPFRLSDAITNRAK
TrEMBL top hitse value%identityAlignment
A0A0A0KPZ2 SANT domain-containing protein5.2e-1092.11Show/hide
Query:  MIQQLFPSKTRRQIKLKFKSEKHHHPFRLSDAITNRAK
        MIQQLFP KTRRQIKLKFKSE+ HHPFRLSDAITNRAK
Subjt:  MIQQLFPSKTRRQIKLKFKSEKHHHPFRLSDAITNRAK
A0A5A7VKA8 Transcription factor TFIIIB component B''-like isoform X35.2e-1092.11Show/hide
Query:  MIQQLFPSKTRRQIKLKFKSEKHHHPFRLSDAITNRAK
        MIQQLFP KTRRQIKLKFKSE+ HHPFRLSDAITNRAK
Subjt:  MIQQLFPSKTRRQIKLKFKSEKHHHPFRLSDAITNRAK
A0A5D3CTI0 Peroxidase 645.2e-1092.11Show/hide
Query:  MIQQLFPSKTRRQIKLKFKSEKHHHPFRLSDAITNRAK
        MIQQLFP KTRRQIKLKFKSE+ HHPFRLSDAITNRAK
Subjt:  MIQQLFPSKTRRQIKLKFKSEKHHHPFRLSDAITNRAK
A0A6J1FJU1 uncharacterized protein LOC111444681 isoform X19.8e-0984.21Show/hide
Query:  MIQQLFPSKTRRQIKLKFKSEKHHHPFRLSDAITNRAK
        MIQQLFP +TR QIKLKFK+E+ HHPFRLSDAITNRAK
Subjt:  MIQQLFPSKTRRQIKLKFKSEKHHHPFRLSDAITNRAK
A0A6J1JVG9 uncharacterized protein LOC111489243 isoform X19.8e-0984.21Show/hide
Query:  MIQQLFPSKTRRQIKLKFKSEKHHHPFRLSDAITNRAK
        MIQQLFP +TR QIKLKFK+E+ HHPFRLSDAITNRAK
Subjt:  MIQQLFPSKTRRQIKLKFKSEKHHHPFRLSDAITNRAK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G39160.1 Homeodomain-like superfamily protein5.3e-0757.89Show/hide
Query:  MIQQLFPSKTRRQIKLKFKSEKHHHPFRLSDAITNRAK
        MIQQLFP +TR Q+KLKFK E+  +P +L+DA+++R+K
Subjt:  MIQQLFPSKTRRQIKLKFKSEKHHHPFRLSDAITNRAK
AT4G39160.2 Homeodomain-like superfamily protein5.3e-0757.89Show/hide
Query:  MIQQLFPSKTRRQIKLKFKSEKHHHPFRLSDAITNRAK
        MIQQLFP +TR Q+KLKFK E+  +P +L+DA+++R+K
Subjt:  MIQQLFPSKTRRQIKLKFKSEKHHHPFRLSDAITNRAK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATACAACAATTGTTTCCAAGCAAAACACGCCGCCAAATTAAACTAAAGTTTAAAAGTGAAAAGCATCATCATCCATTTCGTTTATCTGATGCTATAACTAATCGTGC
CAAAGCTGAAAGGAGCTGCTAA
mRNA sequenceShow/hide mRNA sequence
TGTTTGACAATTTGGAACAGACTTTTGTATGATACAACAATTGTTTCCAAGCAAAACACGCCGCCAAATTAAACTAAAGTTTAAAAGTGAAAAGCATCATCATCCATTTC
GTTTATCTGATGCTATAACTAATCGTGCCAAAGCTGAAAGGAGCTGCTAAGGAAAAACAAGAATCCAACCTAGATGAGTTGACTGAAAATACTGGGGATGAAGAGCAGCC
AGAGTTGTCTCCCCAAACTAATGAGGAAGAAGTGGAGCAACCTGAAGGAGTGGAGGAGACAGGAAAGGAAGAATTTGTTGGTGGTGAAGTTCGCAGTCCACTGAAGGGTG
AGGGAAGTGATGATGATCCTAATAGATGGGATGAATATAAATTCGATTTTTAATGTTAATTTAT
Protein sequenceShow/hide protein sequence
MIQQLFPSKTRRQIKLKFKSEKHHHPFRLSDAITNRAKAERSC