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Cmc09g0249601 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc09g0249601
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Descriptiontranscription factor TFIIIB component B''-like
Genome locationCMiso1.1chr09:15512374..15513996
RNA-Seq ExpressionCmc09g0249601
SyntenyCmc09g0249601
Gene Ontology termsGO:0006457 - protein folding (biological process)
GO:0015074 - DNA integration (biological process)
GO:0070898 - RNA polymerase III preinitiation complex assembly (biological process)
GO:0098869 - cellular oxidant detoxification (biological process)
GO:0000126 - transcription factor TFIIIB complex (cellular component)
GO:0016272 - prefoldin complex (cellular component)
GO:0001156 - TFIIIC-class transcription factor complex binding (molecular function)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004601 - peroxidase activity (molecular function)
GO:0051082 - unfolded protein binding (molecular function)
InterPro domainsIPR001005 - SANT/Myb domain
IPR009057 - Homeobox-like domain superfamily
IPR039467 - Transcription factor TFIIIB component B'', Myb domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0066161.1 transcription factor TFIIIB component B''-like isoform X3 [Cucumis melo var. makuwa]3.2e-18100Show/hide
Query:  AVRQFGTDFCMIQQLFPGKTRRQIKLKFKSEERHHPFRLSDAITNRAK
        AVRQFGTDFCMIQQLFPGKTRRQIKLKFKSEERHHPFRLSDAITNRAK
Subjt:  AVRQFGTDFCMIQQLFPGKTRRQIKLKFKSEERHHPFRLSDAITNRAK
KAG6579077.1 hypothetical protein SDJN03_23525, partial [Cucurbita argyrosperma subsp. sororia]5.9e-1793.75Show/hide
Query:  AVRQFGTDFCMIQQLFPGKTRRQIKLKFKSEERHHPFRLSDAITNRAK
        AVRQFGTDFCMIQQLFPG+TR QIKLKFK+EERHHPFRLSDAITNRAK
Subjt:  AVRQFGTDFCMIQQLFPGKTRRQIKLKFKSEERHHPFRLSDAITNRAK
KAG7016602.1 hypothetical protein SDJN02_21712, partial [Cucurbita argyrosperma subsp. argyrosperma]5.9e-1793.75Show/hide
Query:  AVRQFGTDFCMIQQLFPGKTRRQIKLKFKSEERHHPFRLSDAITNRAK
        AVRQFGTDFCMIQQLFPG+TR QIKLKFK+EERHHPFRLSDAITNRAK
Subjt:  AVRQFGTDFCMIQQLFPGKTRRQIKLKFKSEERHHPFRLSDAITNRAK
TYK15203.1 peroxidase 64 [Cucumis melo var. makuwa]3.2e-18100Show/hide
Query:  AVRQFGTDFCMIQQLFPGKTRRQIKLKFKSEERHHPFRLSDAITNRAK
        AVRQFGTDFCMIQQLFPGKTRRQIKLKFKSEERHHPFRLSDAITNRAK
Subjt:  AVRQFGTDFCMIQQLFPGKTRRQIKLKFKSEERHHPFRLSDAITNRAK
XP_011655158.1 uncharacterized protein LOC101216268 [Cucumis sativus]3.2e-18100Show/hide
Query:  AVRQFGTDFCMIQQLFPGKTRRQIKLKFKSEERHHPFRLSDAITNRAK
        AVRQFGTDFCMIQQLFPGKTRRQIKLKFKSEERHHPFRLSDAITNRAK
Subjt:  AVRQFGTDFCMIQQLFPGKTRRQIKLKFKSEERHHPFRLSDAITNRAK
TrEMBL top hitse value%identityAlignment
A0A0A0KPZ2 SANT domain-containing protein1.5e-18100Show/hide
Query:  AVRQFGTDFCMIQQLFPGKTRRQIKLKFKSEERHHPFRLSDAITNRAK
        AVRQFGTDFCMIQQLFPGKTRRQIKLKFKSEERHHPFRLSDAITNRAK
Subjt:  AVRQFGTDFCMIQQLFPGKTRRQIKLKFKSEERHHPFRLSDAITNRAK
A0A5A7VKA8 Transcription factor TFIIIB component B''-like isoform X31.5e-18100Show/hide
Query:  AVRQFGTDFCMIQQLFPGKTRRQIKLKFKSEERHHPFRLSDAITNRAK
        AVRQFGTDFCMIQQLFPGKTRRQIKLKFKSEERHHPFRLSDAITNRAK
Subjt:  AVRQFGTDFCMIQQLFPGKTRRQIKLKFKSEERHHPFRLSDAITNRAK
A0A5D3CTI0 Peroxidase 641.5e-18100Show/hide
Query:  AVRQFGTDFCMIQQLFPGKTRRQIKLKFKSEERHHPFRLSDAITNRAK
        AVRQFGTDFCMIQQLFPGKTRRQIKLKFKSEERHHPFRLSDAITNRAK
Subjt:  AVRQFGTDFCMIQQLFPGKTRRQIKLKFKSEERHHPFRLSDAITNRAK
A0A6J1FJU1 uncharacterized protein LOC111444681 isoform X12.9e-1793.75Show/hide
Query:  AVRQFGTDFCMIQQLFPGKTRRQIKLKFKSEERHHPFRLSDAITNRAK
        AVRQFGTDFCMIQQLFPG+TR QIKLKFK+EERHHPFRLSDAITNRAK
Subjt:  AVRQFGTDFCMIQQLFPGKTRRQIKLKFKSEERHHPFRLSDAITNRAK
A0A6J1JVG9 uncharacterized protein LOC111489243 isoform X12.9e-1793.75Show/hide
Query:  AVRQFGTDFCMIQQLFPGKTRRQIKLKFKSEERHHPFRLSDAITNRAK
        AVRQFGTDFCMIQQLFPG+TR QIKLKFK+EERHHPFRLSDAITNRAK
Subjt:  AVRQFGTDFCMIQQLFPGKTRRQIKLKFKSEERHHPFRLSDAITNRAK
SwissProt top hitse value%identityAlignment
A6H8Y1 Transcription factor TFIIIB component B'' homolog7.8e-0444.68Show/hide
Query:  MAVRQFGTDFCMIQQLFPGKTRRQIKLKFKSEERHHPFRLSDAITNR
        +A+   GTDF MI QLFP + R +IK KFK EE+ + +R+  A   +
Subjt:  MAVRQFGTDFCMIQQLFPGKTRRQIKLKFKSEERHHPFRLSDAITNR
O94481 Transcription factor TFIIIB component B''4.4e-0755.81Show/hide
Query:  AVRQFGTDFCMIQQLFPGKTRRQIKLKFKSEERHHPFRLSDAI
        A+ Q+GTDF +I  +FP + RRQIKLKFK EER +P R++ A+
Subjt:  AVRQFGTDFCMIQQLFPGKTRRQIKLKFKSEERHHPFRLSDAI
Q571C7 Transcription factor TFIIIB component B'' homolog7.8e-0444.68Show/hide
Query:  MAVRQFGTDFCMIQQLFPGKTRRQIKLKFKSEERHHPFRLSDAITNR
        +A+   GTDF MI QLFP + R +IK KFK EE+ + +R+  A   +
Subjt:  MAVRQFGTDFCMIQQLFPGKTRRQIKLKFKSEERHHPFRLSDAITNR
Arabidopsis top hitse value%identityAlignment
AT4G39160.1 Homeodomain-like superfamily protein3.4e-1055.32Show/hide
Query:  VRQFGTDFCMIQQLFPGKTRRQIKLKFKSEERHHPFRLSDAITNRAK
        +++FG++  MIQQLFP +TR Q+KLKFK EER +P +L+DA+++R+K
Subjt:  VRQFGTDFCMIQQLFPGKTRRQIKLKFKSEERHHPFRLSDAITNRAK
AT4G39160.2 Homeodomain-like superfamily protein3.4e-1055.32Show/hide
Query:  VRQFGTDFCMIQQLFPGKTRRQIKLKFKSEERHHPFRLSDAITNRAK
        +++FG++  MIQQLFP +TR Q+KLKFK EER +P +L+DA+++R+K
Subjt:  VRQFGTDFCMIQQLFPGKTRRQIKLKFKSEERHHPFRLSDAITNRAK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTTTATTTCTTGTATTTGTTTCAATGGCTGTTCGACAATTTGGAACAGACTTTTGTATGATACAACAATTGTTTCCAGGCAAAACACGCCGCCAAATTAAACTAAA
GTTTAAAAGTGAAGAGCGTCATCATCCATTTCGTTTATCTGATGCTATAACTAATCGTGCCAAAGCTGAAAGGAGCTGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGCTTTTATTTCTTGTATTTGTTTCAATGGCTGTTCGACAATTTGGAACAGACTTTTGTATGATACAACAATTGTTTCCAGGCAAAACACGCCGCCAAATTAAACTAAA
GTTTAAAAGTGAAGAGCGTCATCATCCATTTCGTTTATCTGATGCTATAACTAATCGTGCCAAAGCTGAAAGGAGCTGCTAAGGAAAAACAAGAATCCAACCTAGATGAG
TTGACTGAAAATACTGGGGATGAAGAGCAGCCAAAGTTGTCTCCCCAAACTAATGAGGAAGAAGTGGAGCAACCTGAAGGAGTGGAGGAGACAGGAAAGGAAGAATTTGT
TGGTGGTGAAGTTCGCAGTCCGCTGA
Protein sequenceShow/hide protein sequence
MLLFLVFVSMAVRQFGTDFCMIQQLFPGKTRRQIKLKFKSEERHHPFRLSDAITNRAKAERSC