; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc09g0249721 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc09g0249721
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionTranscription initiation factor TFIID subunit 11 isoform X3
Genome locationCMiso1.1chr09:15681181..15685909
RNA-Seq ExpressionCmc09g0249721
SyntenyCmc09g0249721
Gene Ontology termsGO:0006413 - translational initiation (biological process)
GO:0003743 - translation initiation factor activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0066134.1 transcription initiation factor TFIID subunit 11 isoform X3 [Cucumis melo var. makuwa]3.7e-9499.48Show/hide
Query:  MDSRKKTGRGNDDEQEQIEQLLQAAQDDLMLKLTLDSHMSRVSPNYLHSDLDRRFQALRSRPSSTAAAVPRNPRSSHPHIQSDSSSRPPPPIENLVVDGE
        MDSRKKTGRGNDDEQEQIEQLLQAAQDDLMLKLTLDSHMSRVSPNYLHSDLDRRFQALRSRPSSTAAAVPRNPRSSHPHIQSDSSSRPPPPIENLVVDGE
Subjt:  MDSRKKTGRGNDDEQEQIEQLLQAAQDDLMLKLTLDSHMSRVSPNYLHSDLDRRFQALRSRPSSTAAAVPRNPRSSHPHIQSDSSSRPPPPIENLVVDGE

Query:  SQSILGDDLAARFAALKASLPSSTTPPSSSIPNDVDSADEEDEVEKLIQWAKDAARLDPSPPSEEDDEEEEFISSDEDVNDRIKERRKKKAG
        SQSIL DDLAARFAALKASLPSSTTPPSSSIPNDVDSADEEDEVEKLIQWAKDAARLDPSPPSEEDDEEEEFISSDEDVNDRIKERRKKKAG
Subjt:  SQSILGDDLAARFAALKASLPSSTTPPSSSIPNDVDSADEEDEVEKLIQWAKDAARLDPSPPSEEDDEEEEFISSDEDVNDRIKERRKKKAG

KAG7016610.1 hypothetical protein SDJN02_21720, partial [Cucurbita argyrosperma subsp. argyrosperma]1.4e-7283.94Show/hide
Query:  KKTGRGNDDEQEQIEQLLQAAQDDLMLKLTLDSHMSRVSPNYLHSDLDRRFQALRSRPSSTAAAVPRNPRSSHPHIQSDSSSRPPPPIENLVVDGESQSI
        +K G GN+D  EQ+EQLLQAAQDDLMLKL++DSHMSRVSPNYL SDLDRRFQALRSRPSS+AAA  RNPR S PH QSDSSSR PPPIENLVVDGESQSI
Subjt:  KKTGRGNDDEQEQIEQLLQAAQDDLMLKLTLDSHMSRVSPNYLHSDLDRRFQALRSRPSSTAAAVPRNPRSSHPHIQSDSSSRPPPPIENLVVDGESQSI

Query:  LGDDLAARFAALKASLPSSTTPPSSSIPNDVDSADEEDEVEKLIQWAKDAARLDPSPPSEEDDE------EEEFISSDEDVNDRIKERRKKKA
        LGDDLAARFAALKASLPSS TPP SSIPNDVDS DEEDEVEKLIQWAKDAARLDPSPPSEEDDE      +EEF SSDED++DR KERRKKKA
Subjt:  LGDDLAARFAALKASLPSSTTPPSSSIPNDVDSADEEDEVEKLIQWAKDAARLDPSPPSEEDDE------EEEFISSDEDVNDRIKERRKKKA

TYK15177.1 transcription initiation factor TFIID subunit 11 isoform X3 [Cucumis melo var. makuwa]5.7e-95100Show/hide
Query:  MDSRKKTGRGNDDEQEQIEQLLQAAQDDLMLKLTLDSHMSRVSPNYLHSDLDRRFQALRSRPSSTAAAVPRNPRSSHPHIQSDSSSRPPPPIENLVVDGE
        MDSRKKTGRGNDDEQEQIEQLLQAAQDDLMLKLTLDSHMSRVSPNYLHSDLDRRFQALRSRPSSTAAAVPRNPRSSHPHIQSDSSSRPPPPIENLVVDGE
Subjt:  MDSRKKTGRGNDDEQEQIEQLLQAAQDDLMLKLTLDSHMSRVSPNYLHSDLDRRFQALRSRPSSTAAAVPRNPRSSHPHIQSDSSSRPPPPIENLVVDGE

Query:  SQSILGDDLAARFAALKASLPSSTTPPSSSIPNDVDSADEEDEVEKLIQWAKDAARLDPSPPSEEDDEEEEFISSDEDVNDRIKERRKKKAG
        SQSILGDDLAARFAALKASLPSSTTPPSSSIPNDVDSADEEDEVEKLIQWAKDAARLDPSPPSEEDDEEEEFISSDEDVNDRIKERRKKKAG
Subjt:  SQSILGDDLAARFAALKASLPSSTTPPSSSIPNDVDSADEEDEVEKLIQWAKDAARLDPSPPSEEDDEEEEFISSDEDVNDRIKERRKKKAG

XP_004150191.1 uncharacterized protein LOC101219995 [Cucumis sativus]5.7e-7988.02Show/hide
Query:  MDSRKKTGRGNDDEQEQIEQLLQAAQDDLMLKLTLDSHMSRVSPNYLHSDLDRRFQALRSRPSSTAAAVPRNPRSSHPHIQSDSSSRPPPPIENLVVDGE
        MDSRKKTGRGNDDEQEQIEQLLQAAQDDLMLKL+LDSHMSRVSPNYL SDLDRRFQALRSRP          PRSSHPHIQSDSS +PPPPIENLVVDGE
Subjt:  MDSRKKTGRGNDDEQEQIEQLLQAAQDDLMLKLTLDSHMSRVSPNYLHSDLDRRFQALRSRPSSTAAAVPRNPRSSHPHIQSDSSSRPPPPIENLVVDGE

Query:  SQSILGDDLAARFAALKASLPSSTTPPSSSIPNDVDSADEEDEVEKLIQWAKDAARLDPSPPSEEDDEEEEFISSDEDVNDRIKERRKKKAG
        SQSILGDDLAARFAALKASLPSS  P SSSIPND DS DEEDEVEKLIQWAKDAARLDPSPPSEE DEEEEF SSDEDV+DRIKERRKKK G
Subjt:  SQSILGDDLAARFAALKASLPSSTTPPSSSIPNDVDSADEEDEVEKLIQWAKDAARLDPSPPSEEDDEEEEFISSDEDVNDRIKERRKKKAG

XP_016903615.1 PREDICTED: uncharacterized protein LOC103502866 [Cucumis melo]3.7e-9498.96Show/hide
Query:  MDSRKKTGRGNDDEQEQIEQLLQAAQDDLMLKLTLDSHMSRVSPNYLHSDLDRRFQALRSRPSSTAAAVPRNPRSSHPHIQSDSSSRPPPPIENLVVDGE
        MDSRKKTGRGNDDEQEQIEQLLQAAQDDL+LKLTLDSHMSRVSPNYLHSDLDRRFQALRSRPSSTAAAVPRNPRSSHPHIQSDSSSRPPPPIENLVVDGE
Subjt:  MDSRKKTGRGNDDEQEQIEQLLQAAQDDLMLKLTLDSHMSRVSPNYLHSDLDRRFQALRSRPSSTAAAVPRNPRSSHPHIQSDSSSRPPPPIENLVVDGE

Query:  SQSILGDDLAARFAALKASLPSSTTPPSSSIPNDVDSADEEDEVEKLIQWAKDAARLDPSPPSEEDDEEEEFISSDEDVNDRIKERRKKKAG
        SQSILGDDLAARFAALKASLPSSTTPPSSSIPNDVDSADEEDEVEKLIQWAKDAARLDPSPPSEEDDEEEEFISSDEDVNDR+KERRKKKAG
Subjt:  SQSILGDDLAARFAALKASLPSSTTPPSSSIPNDVDSADEEDEVEKLIQWAKDAARLDPSPPSEEDDEEEEFISSDEDVNDRIKERRKKKAG

TrEMBL top hitse value%identityAlignment
A0A1S4E6L5 uncharacterized protein LOC1035028661.8e-9498.96Show/hide
Query:  MDSRKKTGRGNDDEQEQIEQLLQAAQDDLMLKLTLDSHMSRVSPNYLHSDLDRRFQALRSRPSSTAAAVPRNPRSSHPHIQSDSSSRPPPPIENLVVDGE
        MDSRKKTGRGNDDEQEQIEQLLQAAQDDL+LKLTLDSHMSRVSPNYLHSDLDRRFQALRSRPSSTAAAVPRNPRSSHPHIQSDSSSRPPPPIENLVVDGE
Subjt:  MDSRKKTGRGNDDEQEQIEQLLQAAQDDLMLKLTLDSHMSRVSPNYLHSDLDRRFQALRSRPSSTAAAVPRNPRSSHPHIQSDSSSRPPPPIENLVVDGE

Query:  SQSILGDDLAARFAALKASLPSSTTPPSSSIPNDVDSADEEDEVEKLIQWAKDAARLDPSPPSEEDDEEEEFISSDEDVNDRIKERRKKKAG
        SQSILGDDLAARFAALKASLPSSTTPPSSSIPNDVDSADEEDEVEKLIQWAKDAARLDPSPPSEEDDEEEEFISSDEDVNDR+KERRKKKAG
Subjt:  SQSILGDDLAARFAALKASLPSSTTPPSSSIPNDVDSADEEDEVEKLIQWAKDAARLDPSPPSEEDDEEEEFISSDEDVNDRIKERRKKKAG

A0A5A7VFP6 Transcription initiation factor TFIID subunit 11 isoform X31.8e-9499.48Show/hide
Query:  MDSRKKTGRGNDDEQEQIEQLLQAAQDDLMLKLTLDSHMSRVSPNYLHSDLDRRFQALRSRPSSTAAAVPRNPRSSHPHIQSDSSSRPPPPIENLVVDGE
        MDSRKKTGRGNDDEQEQIEQLLQAAQDDLMLKLTLDSHMSRVSPNYLHSDLDRRFQALRSRPSSTAAAVPRNPRSSHPHIQSDSSSRPPPPIENLVVDGE
Subjt:  MDSRKKTGRGNDDEQEQIEQLLQAAQDDLMLKLTLDSHMSRVSPNYLHSDLDRRFQALRSRPSSTAAAVPRNPRSSHPHIQSDSSSRPPPPIENLVVDGE

Query:  SQSILGDDLAARFAALKASLPSSTTPPSSSIPNDVDSADEEDEVEKLIQWAKDAARLDPSPPSEEDDEEEEFISSDEDVNDRIKERRKKKAG
        SQSIL DDLAARFAALKASLPSSTTPPSSSIPNDVDSADEEDEVEKLIQWAKDAARLDPSPPSEEDDEEEEFISSDEDVNDRIKERRKKKAG
Subjt:  SQSILGDDLAARFAALKASLPSSTTPPSSSIPNDVDSADEEDEVEKLIQWAKDAARLDPSPPSEEDDEEEEFISSDEDVNDRIKERRKKKAG

A0A5D3CTC3 Transcription initiation factor TFIID subunit 11 isoform X32.8e-95100Show/hide
Query:  MDSRKKTGRGNDDEQEQIEQLLQAAQDDLMLKLTLDSHMSRVSPNYLHSDLDRRFQALRSRPSSTAAAVPRNPRSSHPHIQSDSSSRPPPPIENLVVDGE
        MDSRKKTGRGNDDEQEQIEQLLQAAQDDLMLKLTLDSHMSRVSPNYLHSDLDRRFQALRSRPSSTAAAVPRNPRSSHPHIQSDSSSRPPPPIENLVVDGE
Subjt:  MDSRKKTGRGNDDEQEQIEQLLQAAQDDLMLKLTLDSHMSRVSPNYLHSDLDRRFQALRSRPSSTAAAVPRNPRSSHPHIQSDSSSRPPPPIENLVVDGE

Query:  SQSILGDDLAARFAALKASLPSSTTPPSSSIPNDVDSADEEDEVEKLIQWAKDAARLDPSPPSEEDDEEEEFISSDEDVNDRIKERRKKKAG
        SQSILGDDLAARFAALKASLPSSTTPPSSSIPNDVDSADEEDEVEKLIQWAKDAARLDPSPPSEEDDEEEEFISSDEDVNDRIKERRKKKAG
Subjt:  SQSILGDDLAARFAALKASLPSSTTPPSSSIPNDVDSADEEDEVEKLIQWAKDAARLDPSPPSEEDDEEEEFISSDEDVNDRIKERRKKKAG

A0A6J1FGM0 nucleolin6.2e-7184.54Show/hide
Query:  MDSRKKTGRGNDDEQEQIEQLLQAAQDDLMLKLTLDSHMSRVSPNYLHSDLDRRFQALRSRPSSTAAAVPRNPRSSHPHIQSDSSSRPPPPIENLVVDGE
        MD RK    GN+D  EQ+EQLLQAAQDDLMLKL++DSHMSRVSPNYL SDLDRRFQALRSRPSS AAA  RNPR S PH QSDSSSR PPPIENLVVDGE
Subjt:  MDSRKKTGRGNDDEQEQIEQLLQAAQDDLMLKLTLDSHMSRVSPNYLHSDLDRRFQALRSRPSSTAAAVPRNPRSSHPHIQSDSSSRPPPPIENLVVDGE

Query:  SQSILGDDLAARFAALKASLPSSTTPPSSSIPNDVDSADEEDEVEKLIQWAKDAARLDPSPPSEEDDE---EEEFISSDEDVNDRIKERRKKKA
        SQSILGDDLAARFAALKASLPSS TPP SSIPNDVDS DEEDEVEKLIQWAKDAARLDPSPPSEEDDE   +EEF SSDED++DR KERRKKKA
Subjt:  SQSILGDDLAARFAALKASLPSSTTPPSSSIPNDVDSADEEDEVEKLIQWAKDAARLDPSPPSEEDDE---EEEFISSDEDVNDRIKERRKKKA

A0A6J1JTW4 glucosidase 2 subunit beta1.1e-7082.9Show/hide
Query:  KKTGRGNDDEQEQIEQLLQAAQDDLMLKLTLDSHMSRVSPNYLHSDLDRRFQALRSRPSSTAAAVPRNPRSSHPHIQSDSSSRPPPPIENLVVDGESQSI
        +K G GN+D  EQ+EQLLQAAQDDLMLKL++DSHMSRVSPNYL SDLDRRFQALRSRPSS AA   RNPR+S PH QSDSSSR PPPIENLVVDGESQSI
Subjt:  KKTGRGNDDEQEQIEQLLQAAQDDLMLKLTLDSHMSRVSPNYLHSDLDRRFQALRSRPSSTAAAVPRNPRSSHPHIQSDSSSRPPPPIENLVVDGESQSI

Query:  LGDDLAARFAALKASLPSSTTPPSSSIPNDVDSADEEDEVEKLIQWAKDAARLDPSPPSEEDDE------EEEFISSDEDVNDRIKERRKKKA
        LGDDLAARFAALKASLPSS TPP SSIPNDVDS DEEDEVEKLIQWAKDA RLDPSPPSEEDDE      +EEF SSDED++DR KERRKKKA
Subjt:  LGDDLAARFAALKASLPSSTTPPSSSIPNDVDSADEEDEVEKLIQWAKDAARLDPSPPSEEDDE------EEEFISSDEDVNDRIKERRKKKA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G24370.1 unknown protein5.8e-2141.99Show/hide
Query:  RGNDDEQEQIEQLLQAAQDDLMLKLTLDSHMSRVSPNYLHSDLDRRFQALRSRPSSTAAAVPRNPRSSHPHIQSDSSSRPPPPIENLVVDGESQSILGDD
        R    E++++EQLLQAAQD+++LKL++DSH SR S +YL  DL  RF AL+S+            +      Q     R  P  +++V +        +D
Subjt:  RGNDDEQEQIEQLLQAAQDDLMLKLTLDSHMSRVSPNYLHSDLDRRFQALRSRPSSTAAAVPRNPRSSHPHIQSDSSSRPPPPIENLVVDGESQSILGDD

Query:  LAARFAALKASLPSSTTPPS----SSIPNDVDSADEEDEVEKLIQWAKDAARLDPSPPSEEDDEEEEFISSDEDVNDRIKE
        L  RFAALK SLPS+++  S      I  D D   E+ EV+KLIQWA DAARLDPSP S  DDE+ +   SD D ND  ++
Subjt:  LAARFAALKASLPSSTTPPS----SSIPNDVDSADEEDEVEKLIQWAKDAARLDPSPPSEEDDEEEEFISSDEDVNDRIKE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTCGAGAAAGAAGACGGGAAGAGGCAACGACGACGAACAGGAACAAATCGAGCAATTGTTACAAGCAGCTCAAGACGATCTGATGCTCAAATTGACCCTCGATTC
TCACATGTCTCGTGTTTCCCCAAACTATCTCCATTCCGATCTCGATCGCCGTTTCCAAGCCCTAAGATCGCGTCCTTCCTCCACCGCCGCCGCCGTTCCCCGCAATCCTC
GCTCTTCTCACCCGCATATTCAGTCCGATTCCTCGTCCCGACCCCCGCCGCCGATTGAAAATCTCGTCGTCGATGGCGAATCTCAGTCGATTCTCGGCGACGATCTTGCT
GCTAGATTCGCTGCTCTGAAGGCGTCTTTGCCTTCCTCGACTACTCCGCCTTCATCCTCGATACCTAATGATGTTGATAGCGCGGACGAAGAGGATGAGGTTGAGAAGCT
GATTCAGTGGGCTAAGGATGCCGCTCGACTCGATCCTTCGCCTCCATCTGAGGAAGACGATGAAGAAGAGGAGTTCATCAGTTCCGATGAAGATGTCAACGATCGGATAA
AAGAGCGTCGGAAAAAGAAGGCCGGATGA
mRNA sequenceShow/hide mRNA sequence
GAATATTAAGAACAACCCACTAACATCACCCGAAGACAACAATCCGGCAACCGACCAATATATTTTTTCGATGGCAGAAGGGAGAAAAATAGGATTAGTTTTGTAAATTT
AGGTGATGATGGGGCAGAATTCAAAAGTTTTGAATTTCAATTTTATCCCTTTGTCTCTAGTAGAAAAAAAAGGTATTTTTTTACAAAATTCCTAAAAAGATCCACAAAAC
AAGAGCAGAATGGATTCGAGAAAGAAGACGGGAAGAGGCAACGACGACGAACAGGAACAAATCGAGCAATTGTTACAAGCAGCTCAAGACGATCTGATGCTCAAATTGAC
CCTCGATTCTCACATGTCTCGTGTTTCCCCAAACTATCTCCATTCCGATCTCGATCGCCGTTTCCAAGCCCTAAGATCGCGTCCTTCCTCCACCGCCGCCGCCGTTCCCC
GCAATCCTCGCTCTTCTCACCCGCATATTCAGTCCGATTCCTCGTCCCGACCCCCGCCGCCGATTGAAAATCTCGTCGTCGATGGCGAATCTCAGTCGATTCTCGGCGAC
GATCTTGCTGCTAGATTCGCTGCTCTGAAGGCGTCTTTGCCTTCCTCGACTACTCCGCCTTCATCCTCGATACCTAATGATGTTGATAGCGCGGACGAAGAGGATGAGGT
TGAGAAGCTGATTCAGTGGGCTAAGGATGCCGCTCGACTCGATCCTTCGCCTCCATCTGAGGAAGACGATGAAGAAGAGGAGTTCATCAGTTCCGATGAAGATGTCAACG
ATCGGATAAAAGAGCGTCGGAAAAAGAAGGCCGGATGAGCGTCGATTGAAACTGCTGTCTGTTCGTGCAGCATTATTCGATTCACTGATTTTGTGGCATTTTAGAAACTG
GAGATTCGCACATTGGATAGATACAATCCGGATTTTGGTTGAACTAGATCGTGATAACGGAAGCCTCTCCGGCGCGGCGTCTCAAATTACAAGTTGAAGTTTGGGCATAT
GAGTCTATACCAACCATCATTGGATGTGGTGTAGATAAAGTAAACGATCATGCCATACCACGAATGCTGAGGTGGGTGTGCCAACAATCACCAAAGTCCCAAACTATAAG
CCAGGTGTTTGACTCGCCAATGTTTATAATTAAGGCGGTCATTGAGATGACACCTGAAGAGGAGCAATTGAAAATTGCTTCAGGTGAACTTTTTGAAAACTTCCGCTCAT
CTACCATTATTCAGTCGAAGAATGGTGGTTCAAAAAGAGTACGAGAAGTTGTTAACGATGAAGATGAGTTGAAAAATAGTAAGAAACAGAAGTCCAAGATTAAGATGAAA
AAGGCTATTCGAAATCTCCAAGATCGAGTAGCGGTTGTTGAAGGCCAACTTAATACTATAAAATCCGATATTGACGAATTGAAGGGCCTGATGTCAACCATATTGAAGCA
CATTGGACTTCAAAGAAAGGGTGACGAAGGGGACCACAAGGTGTCCGAAGGCTTGGAGGATGAACACATTGAAGTTAAAAAGAAGGGTGACGAAGATGTGTTGGAGAAGA
AGGTTGATATTGGTTTAGAGGAGCCAATAGATGTCGTTGACGATGAGGACGTCATAGAGATAGAACCATTTCTCACTCAACGACCACACGTTCGGCCCGCCCGTAGGAAG
CGTGCAAGTGTTTACCTATCAACCCCATTCACAACTCTACCTAAACGGTCTCTGACATCAACCACCAGCACCTCTGAGTCTGAAGCAATTGTTTATGATCCTATGCACAA
AATACTTGACGTCCATTTAGATAGACTTCGAGCGTGGATTACAGACAAGCGTACAGACGATGAGCTGCGTGAAACCTTTCATGGGAAAAAAT
Protein sequenceShow/hide protein sequence
MDSRKKTGRGNDDEQEQIEQLLQAAQDDLMLKLTLDSHMSRVSPNYLHSDLDRRFQALRSRPSSTAAAVPRNPRSSHPHIQSDSSSRPPPPIENLVVDGESQSILGDDLA
ARFAALKASLPSSTTPPSSSIPNDVDSADEEDEVEKLIQWAKDAARLDPSPPSEEDDEEEEFISSDEDVNDRIKERRKKKAG