| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0037745.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 7.7e-185 | 71.37 | Show/hide |
Query: LPSSVLQNIFSFERLYGIPPNYSNLKVFGCACFVLLHPHEHTKLEPRVRLCCFLGYGTEYKGFRCSDPLSNRLRISRHVTFCEHTMFSRLSSFHASFSSP
LPSSVLQNI FERLYG PPNYSNLKVFGCACFVLL PHEHTKLEPR RLCCFLGYGTE+KGFRC DPLSNRLRISRHVTF EHTMFSRLSSFHASFSSP
Subjt: LPSSVLQNIFSFERLYGIPPNYSNLKVFGCACFVLLHPHEHTKLEPRVRLCCFLGYGTEYKGFRCSDPLSNRLRISRHVTFCEHTMFSRLSSFHASFSSP
Query: QSFFIDTFIDLFPLSESTPDND-----PLAASG-------------------------------------------------------------------
QSFF DT IDLFPLSESTP N+ P +A+
Subjt: QSFFIDTFIDLFPLSESTPDND-----PLAASG-------------------------------------------------------------------
Query: ---------------------------------------SAHLVAKGYSKEYGIDYEETFAPVARMTSVRSLLAVAAAKQWSLLQMDVKNAFLNGTLFEE
A LVAKGYS+EYGIDYEETFAPVARMTSVRSLLAVAAAKQW LLQMDVKNAFLNGTL EE
Subjt: ---------------------------------------SAHLVAKGYSKEYGIDYEETFAPVARMTSVRSLLAVAAAKQWSLLQMDVKNAFLNGTLFEE
Query: VYMKPPPGTSSPPHKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSLHDTALFTRHTPQGIVLLLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDL
VYMKPPPGTSSPPHKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSS HDTALFTRHTPQGIVLLLLYVDDMIITGNDP AISDLQHYLGQHFEMKDL
Subjt: VYMKPPPGTSSPPHKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSLHDTALFTRHTPQGIVLLLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDL
Query: GSLNYFLGLEVFRCSDGYLLSQAKYASDLLARSGITNFNTASTPLDLNVHLTPYDGVPLEDVSLYWQLVGSLIYLTVTRPDIAYVVHIVSQFMAAP
GSLNYFLGLEV R SDGYLLSQAKYASDLLARSGIT+ NTASTPLD NVHLTPYDGVPLE+VSLY QLVGSLIYLTVTRPDIAY VHIVSQFMAAP
Subjt: GSLNYFLGLEVFRCSDGYLLSQAKYASDLLARSGITNFNTASTPLDLNVHLTPYDGVPLEDVSLYWQLVGSLIYLTVTRPDIAYVVHIVSQFMAAP
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| KAA0041601.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 7.7e-185 | 71.37 | Show/hide |
Query: LPSSVLQNIFSFERLYGIPPNYSNLKVFGCACFVLLHPHEHTKLEPRVRLCCFLGYGTEYKGFRCSDPLSNRLRISRHVTFCEHTMFSRLSSFHASFSSP
LPSSVLQNI FERLYG PPNYSNLKVFGCACFVLL PHEHTKLEPR RLCCFLGYGTE+KGFRC DPLSNRLRISRHVTF EHTMFSRLSSFHASFSSP
Subjt: LPSSVLQNIFSFERLYGIPPNYSNLKVFGCACFVLLHPHEHTKLEPRVRLCCFLGYGTEYKGFRCSDPLSNRLRISRHVTFCEHTMFSRLSSFHASFSSP
Query: QSFFIDTFIDLFPLSESTPDND-----PLAASG-------------------------------------------------------------------
QSFF DT IDLFPLSESTP N+ P +A+
Subjt: QSFFIDTFIDLFPLSESTPDND-----PLAASG-------------------------------------------------------------------
Query: ---------------------------------------SAHLVAKGYSKEYGIDYEETFAPVARMTSVRSLLAVAAAKQWSLLQMDVKNAFLNGTLFEE
A LVAKGYS+EYGIDYEETFAPVARMTSVRSLLAVAAAKQW LLQMDVKNAFLNGTL EE
Subjt: ---------------------------------------SAHLVAKGYSKEYGIDYEETFAPVARMTSVRSLLAVAAAKQWSLLQMDVKNAFLNGTLFEE
Query: VYMKPPPGTSSPPHKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSLHDTALFTRHTPQGIVLLLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDL
VYMKPPPGTSSPPHKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSS HDTALFTRHTPQGIVLLLLYVDDMIITGNDP AISDLQHYLGQHFEMKDL
Subjt: VYMKPPPGTSSPPHKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSLHDTALFTRHTPQGIVLLLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDL
Query: GSLNYFLGLEVFRCSDGYLLSQAKYASDLLARSGITNFNTASTPLDLNVHLTPYDGVPLEDVSLYWQLVGSLIYLTVTRPDIAYVVHIVSQFMAAP
GSLNYFLGLEV R SDGYLLSQAKYASDLLARSGIT+ NTASTPLD NVHLTPYDGVPLE+VSLY QLVGSLIYLTVTRPDIAY VHIVSQFMAAP
Subjt: GSLNYFLGLEVFRCSDGYLLSQAKYASDLLARSGITNFNTASTPLDLNVHLTPYDGVPLEDVSLYWQLVGSLIYLTVTRPDIAYVVHIVSQFMAAP
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| KAA0057254.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 1.3e-184 | 73.89 | Show/hide |
Query: LPSSVLQNIFSFERLYGIPPNYSNLKVFGCACFVLLHPHEHTKLEPRVRLCCFLGYGTEYKGFRCSDPLSNRLRISRHVTFCEHTMFSRLSSFHASFSSP
LPSSVLQNI FERLYG PPNYSNLKVFGCACFVLL PHEHTKLEPR RLCCFLGYGTE+KGFRC DPLSNRLRISRHVTF EHTMFSRLSSFHASFSSP
Subjt: LPSSVLQNIFSFERLYGIPPNYSNLKVFGCACFVLLHPHEHTKLEPRVRLCCFLGYGTEYKGFRCSDPLSNRLRISRHVTFCEHTMFSRLSSFHASFSSP
Query: QSFFIDTFIDLFPLSESTPDND-----PLAASGSAHLVAKG-----------------------------------------------------------
QSFF DT IDLFPLSESTP N+ P +A+ ++ G
Subjt: QSFFIDTFIDLFPLSESTPDND-----PLAASGSAHLVAKG-----------------------------------------------------------
Query: ----------------------YSKEYGIDYEETFAPVARMTSVRSLLAVAAAKQWSLLQMDVKNAFLNGTLFEEVYMKPPPGTSSPPHKVCLLRRALYG
YS+EYGIDYEETFAPVARMTSVRSLLAVAAAKQW LLQMDVKNAFLNGTL EEVYMKPPPGTSSPPHKVCLLRRALYG
Subjt: ----------------------YSKEYGIDYEETFAPVARMTSVRSLLAVAAAKQWSLLQMDVKNAFLNGTLFEEVYMKPPPGTSSPPHKVCLLRRALYG
Query: LKQAPRAWFATFSSTITQLGFTSSLHDTALFTRHTPQGIVLLLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDLGSLNYFLGLEVFRCSDGYLLSQAKY
LKQAPRAWFATFSSTITQLGFTSS HDT LFTRHTPQGIVLLLLYVDDMIITGNDP+AISDLQHYLGQHFEMKDLGSLNYFLGLEV R SDGYLLSQAKY
Subjt: LKQAPRAWFATFSSTITQLGFTSSLHDTALFTRHTPQGIVLLLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDLGSLNYFLGLEVFRCSDGYLLSQAKY
Query: ASDLLARSGITNFNTASTPLDLNVHLTPYDGVPLEDVSLYWQLVGSLIYLTVTRPDIAYVVHIVSQFMAAP
ASDLLARSGIT+ NTASTPLD NVHLTPYDGVPLE+VSLY QLVGSLIYLTVTRPDIAY VHIVSQFMAAP
Subjt: ASDLLARSGITNFNTASTPLDLNVHLTPYDGVPLEDVSLYWQLVGSLIYLTVTRPDIAYVVHIVSQFMAAP
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| TYK04714.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 7.7e-185 | 71.37 | Show/hide |
Query: LPSSVLQNIFSFERLYGIPPNYSNLKVFGCACFVLLHPHEHTKLEPRVRLCCFLGYGTEYKGFRCSDPLSNRLRISRHVTFCEHTMFSRLSSFHASFSSP
LPSSVLQNI FERLYG PPNYSNLKVFGCACFVLL PHEHTKLEPR RLCCFLGYGTE+KGFRC DPLSNRLRISRHVTF EHTMFSRLSSFHASFSSP
Subjt: LPSSVLQNIFSFERLYGIPPNYSNLKVFGCACFVLLHPHEHTKLEPRVRLCCFLGYGTEYKGFRCSDPLSNRLRISRHVTFCEHTMFSRLSSFHASFSSP
Query: QSFFIDTFIDLFPLSESTPDND-----PLAASG-------------------------------------------------------------------
QSFF DT IDLFPLSESTP N+ P +A+
Subjt: QSFFIDTFIDLFPLSESTPDND-----PLAASG-------------------------------------------------------------------
Query: ---------------------------------------SAHLVAKGYSKEYGIDYEETFAPVARMTSVRSLLAVAAAKQWSLLQMDVKNAFLNGTLFEE
A LVAKGYS+EYGIDYEETFAPVARMTSVRSLLAVAAAKQW LLQMDVKNAFLNGTL EE
Subjt: ---------------------------------------SAHLVAKGYSKEYGIDYEETFAPVARMTSVRSLLAVAAAKQWSLLQMDVKNAFLNGTLFEE
Query: VYMKPPPGTSSPPHKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSLHDTALFTRHTPQGIVLLLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDL
VYMKPPPGTSSPPHKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSS HDTALFTRHTPQGIVLLLLYVDDMIITGNDP AISDLQHYLGQHFEMKDL
Subjt: VYMKPPPGTSSPPHKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSLHDTALFTRHTPQGIVLLLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDL
Query: GSLNYFLGLEVFRCSDGYLLSQAKYASDLLARSGITNFNTASTPLDLNVHLTPYDGVPLEDVSLYWQLVGSLIYLTVTRPDIAYVVHIVSQFMAAP
GSLNYFLGLEV R SDGYLLSQAKYASDLLARSGIT+ NTASTPLD NVHLTPYDGVPLE+VSLY QLVGSLIYLTVTRPDIAY VHIVSQFMAAP
Subjt: GSLNYFLGLEVFRCSDGYLLSQAKYASDLLARSGITNFNTASTPLDLNVHLTPYDGVPLEDVSLYWQLVGSLIYLTVTRPDIAYVVHIVSQFMAAP
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| TYK21532.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 1.3e-184 | 70.97 | Show/hide |
Query: LPSSVLQNIFSFERLYGIPPNYSNLKVFGCACFVLLHPHEHTKLEPRVRLCCFLGYGTEYKGFRCSDPLSNRLRISRHVTFCEHTMFSRLSSFHASFSSP
LPS VLQNI FE+LYG PPNYSNLKVFGCACFVLLHPHEHTKLEPR RLCCFLGYGTE+KGFRC DPLSNRLRISRHVTF EHTMFSRLSSFH SFSSP
Subjt: LPSSVLQNIFSFERLYGIPPNYSNLKVFGCACFVLLHPHEHTKLEPRVRLCCFLGYGTEYKGFRCSDPLSNRLRISRHVTFCEHTMFSRLSSFHASFSSP
Query: QSFFIDTFIDLFPLSESTPDND-----PLAASG-------------------------------------------------------------------
QSFF DT IDLFPL ESTPDN+ P +A+
Subjt: QSFFIDTFIDLFPLSESTPDND-----PLAASG-------------------------------------------------------------------
Query: ---------------------------------------SAHLVAKGYSKEYGIDYEETFAPVARMTSVRSLLAVAAAKQWSLLQMDVKNAFLNGTLFEE
A LVAKGYS+E+GIDYEETFAPVARMTSVRSLLAVAAAKQW LLQMDVKNAFLNGTL EE
Subjt: ---------------------------------------SAHLVAKGYSKEYGIDYEETFAPVARMTSVRSLLAVAAAKQWSLLQMDVKNAFLNGTLFEE
Query: VYMKPPPGTSSPPHKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSLHDTALFTRHTPQGIVLLLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDL
VYMKPPPGTSSPPHKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSS HDTALFTRHTPQGIVLLLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDL
Subjt: VYMKPPPGTSSPPHKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSLHDTALFTRHTPQGIVLLLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDL
Query: GSLNYFLGLEVFRCSDGYLLSQAKYASDLLARSGITNFNTASTPLDLNVHLTPYDGVPLEDVSLYWQLVGSLIYLTVTRPDIAYVVHIVSQFMAAP
GSLNYFLGLEV R SDGYLLSQAKYASDLLARSGIT+ NTASTPLD NVHLTPYDGVPLE+VSLY QLVGSLIYLTVTRPDIAY VHIVSQFMAAP
Subjt: GSLNYFLGLEVFRCSDGYLLSQAKYASDLLARSGITNFNTASTPLDLNVHLTPYDGVPLEDVSLYWQLVGSLIYLTVTRPDIAYVVHIVSQFMAAP
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7T8F2 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 3.7e-185 | 71.37 | Show/hide |
Query: LPSSVLQNIFSFERLYGIPPNYSNLKVFGCACFVLLHPHEHTKLEPRVRLCCFLGYGTEYKGFRCSDPLSNRLRISRHVTFCEHTMFSRLSSFHASFSSP
LPSSVLQNI FERLYG PPNYSNLKVFGCACFVLL PHEHTKLEPR RLCCFLGYGTE+KGFRC DPLSNRLRISRHVTF EHTMFSRLSSFHASFSSP
Subjt: LPSSVLQNIFSFERLYGIPPNYSNLKVFGCACFVLLHPHEHTKLEPRVRLCCFLGYGTEYKGFRCSDPLSNRLRISRHVTFCEHTMFSRLSSFHASFSSP
Query: QSFFIDTFIDLFPLSESTPDND-----PLAASG-------------------------------------------------------------------
QSFF DT IDLFPLSESTP N+ P +A+
Subjt: QSFFIDTFIDLFPLSESTPDND-----PLAASG-------------------------------------------------------------------
Query: ---------------------------------------SAHLVAKGYSKEYGIDYEETFAPVARMTSVRSLLAVAAAKQWSLLQMDVKNAFLNGTLFEE
A LVAKGYS+EYGIDYEETFAPVARMTSVRSLLAVAAAKQW LLQMDVKNAFLNGTL EE
Subjt: ---------------------------------------SAHLVAKGYSKEYGIDYEETFAPVARMTSVRSLLAVAAAKQWSLLQMDVKNAFLNGTLFEE
Query: VYMKPPPGTSSPPHKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSLHDTALFTRHTPQGIVLLLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDL
VYMKPPPGTSSPPHKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSS HDTALFTRHTPQGIVLLLLYVDDMIITGNDP AISDLQHYLGQHFEMKDL
Subjt: VYMKPPPGTSSPPHKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSLHDTALFTRHTPQGIVLLLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDL
Query: GSLNYFLGLEVFRCSDGYLLSQAKYASDLLARSGITNFNTASTPLDLNVHLTPYDGVPLEDVSLYWQLVGSLIYLTVTRPDIAYVVHIVSQFMAAP
GSLNYFLGLEV R SDGYLLSQAKYASDLLARSGIT+ NTASTPLD NVHLTPYDGVPLE+VSLY QLVGSLIYLTVTRPDIAY VHIVSQFMAAP
Subjt: GSLNYFLGLEVFRCSDGYLLSQAKYASDLLARSGITNFNTASTPLDLNVHLTPYDGVPLEDVSLYWQLVGSLIYLTVTRPDIAYVVHIVSQFMAAP
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| A0A5A7UPX9 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 6.4e-185 | 73.89 | Show/hide |
Query: LPSSVLQNIFSFERLYGIPPNYSNLKVFGCACFVLLHPHEHTKLEPRVRLCCFLGYGTEYKGFRCSDPLSNRLRISRHVTFCEHTMFSRLSSFHASFSSP
LPSSVLQNI FERLYG PPNYSNLKVFGCACFVLL PHEHTKLEPR RLCCFLGYGTE+KGFRC DPLSNRLRISRHVTF EHTMFSRLSSFHASFSSP
Subjt: LPSSVLQNIFSFERLYGIPPNYSNLKVFGCACFVLLHPHEHTKLEPRVRLCCFLGYGTEYKGFRCSDPLSNRLRISRHVTFCEHTMFSRLSSFHASFSSP
Query: QSFFIDTFIDLFPLSESTPDND-----PLAASGSAHLVAKG-----------------------------------------------------------
QSFF DT IDLFPLSESTP N+ P +A+ ++ G
Subjt: QSFFIDTFIDLFPLSESTPDND-----PLAASGSAHLVAKG-----------------------------------------------------------
Query: ----------------------YSKEYGIDYEETFAPVARMTSVRSLLAVAAAKQWSLLQMDVKNAFLNGTLFEEVYMKPPPGTSSPPHKVCLLRRALYG
YS+EYGIDYEETFAPVARMTSVRSLLAVAAAKQW LLQMDVKNAFLNGTL EEVYMKPPPGTSSPPHKVCLLRRALYG
Subjt: ----------------------YSKEYGIDYEETFAPVARMTSVRSLLAVAAAKQWSLLQMDVKNAFLNGTLFEEVYMKPPPGTSSPPHKVCLLRRALYG
Query: LKQAPRAWFATFSSTITQLGFTSSLHDTALFTRHTPQGIVLLLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDLGSLNYFLGLEVFRCSDGYLLSQAKY
LKQAPRAWFATFSSTITQLGFTSS HDT LFTRHTPQGIVLLLLYVDDMIITGNDP+AISDLQHYLGQHFEMKDLGSLNYFLGLEV R SDGYLLSQAKY
Subjt: LKQAPRAWFATFSSTITQLGFTSSLHDTALFTRHTPQGIVLLLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDLGSLNYFLGLEVFRCSDGYLLSQAKY
Query: ASDLLARSGITNFNTASTPLDLNVHLTPYDGVPLEDVSLYWQLVGSLIYLTVTRPDIAYVVHIVSQFMAAP
ASDLLARSGIT+ NTASTPLD NVHLTPYDGVPLE+VSLY QLVGSLIYLTVTRPDIAY VHIVSQFMAAP
Subjt: ASDLLARSGITNFNTASTPLDLNVHLTPYDGVPLEDVSLYWQLVGSLIYLTVTRPDIAYVVHIVSQFMAAP
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| A0A5A7VIT8 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 3.7e-185 | 71.37 | Show/hide |
Query: LPSSVLQNIFSFERLYGIPPNYSNLKVFGCACFVLLHPHEHTKLEPRVRLCCFLGYGTEYKGFRCSDPLSNRLRISRHVTFCEHTMFSRLSSFHASFSSP
LPSSVLQNI FERLYG PPNYSNLKVFGCACFVLL PHEHTKLEPR RLCCFLGYGTE+KGFRC DPLSNRLRISRHVTF EHTMFSRLSSFHASFSSP
Subjt: LPSSVLQNIFSFERLYGIPPNYSNLKVFGCACFVLLHPHEHTKLEPRVRLCCFLGYGTEYKGFRCSDPLSNRLRISRHVTFCEHTMFSRLSSFHASFSSP
Query: QSFFIDTFIDLFPLSESTPDND-----PLAASG-------------------------------------------------------------------
QSFF DT IDLFPLSESTP N+ P +A+
Subjt: QSFFIDTFIDLFPLSESTPDND-----PLAASG-------------------------------------------------------------------
Query: ---------------------------------------SAHLVAKGYSKEYGIDYEETFAPVARMTSVRSLLAVAAAKQWSLLQMDVKNAFLNGTLFEE
A LVAKGYS+EYGIDYEETFAPVARMTSVRSLLAVAAAKQW LLQMDVKNAFLNGTL EE
Subjt: ---------------------------------------SAHLVAKGYSKEYGIDYEETFAPVARMTSVRSLLAVAAAKQWSLLQMDVKNAFLNGTLFEE
Query: VYMKPPPGTSSPPHKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSLHDTALFTRHTPQGIVLLLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDL
VYMKPPPGTSSPPHKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSS HDTALFTRHTPQGIVLLLLYVDDMIITGNDP AISDLQHYLGQHFEMKDL
Subjt: VYMKPPPGTSSPPHKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSLHDTALFTRHTPQGIVLLLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDL
Query: GSLNYFLGLEVFRCSDGYLLSQAKYASDLLARSGITNFNTASTPLDLNVHLTPYDGVPLEDVSLYWQLVGSLIYLTVTRPDIAYVVHIVSQFMAAP
GSLNYFLGLEV R SDGYLLSQAKYASDLLARSGIT+ NTASTPLD NVHLTPYDGVPLE+VSLY QLVGSLIYLTVTRPDIAY VHIVSQFMAAP
Subjt: GSLNYFLGLEVFRCSDGYLLSQAKYASDLLARSGITNFNTASTPLDLNVHLTPYDGVPLEDVSLYWQLVGSLIYLTVTRPDIAYVVHIVSQFMAAP
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| A0A5D3C0D7 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 3.7e-185 | 71.37 | Show/hide |
Query: LPSSVLQNIFSFERLYGIPPNYSNLKVFGCACFVLLHPHEHTKLEPRVRLCCFLGYGTEYKGFRCSDPLSNRLRISRHVTFCEHTMFSRLSSFHASFSSP
LPSSVLQNI FERLYG PPNYSNLKVFGCACFVLL PHEHTKLEPR RLCCFLGYGTE+KGFRC DPLSNRLRISRHVTF EHTMFSRLSSFHASFSSP
Subjt: LPSSVLQNIFSFERLYGIPPNYSNLKVFGCACFVLLHPHEHTKLEPRVRLCCFLGYGTEYKGFRCSDPLSNRLRISRHVTFCEHTMFSRLSSFHASFSSP
Query: QSFFIDTFIDLFPLSESTPDND-----PLAASG-------------------------------------------------------------------
QSFF DT IDLFPLSESTP N+ P +A+
Subjt: QSFFIDTFIDLFPLSESTPDND-----PLAASG-------------------------------------------------------------------
Query: ---------------------------------------SAHLVAKGYSKEYGIDYEETFAPVARMTSVRSLLAVAAAKQWSLLQMDVKNAFLNGTLFEE
A LVAKGYS+EYGIDYEETFAPVARMTSVRSLLAVAAAKQW LLQMDVKNAFLNGTL EE
Subjt: ---------------------------------------SAHLVAKGYSKEYGIDYEETFAPVARMTSVRSLLAVAAAKQWSLLQMDVKNAFLNGTLFEE
Query: VYMKPPPGTSSPPHKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSLHDTALFTRHTPQGIVLLLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDL
VYMKPPPGTSSPPHKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSS HDTALFTRHTPQGIVLLLLYVDDMIITGNDP AISDLQHYLGQHFEMKDL
Subjt: VYMKPPPGTSSPPHKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSLHDTALFTRHTPQGIVLLLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDL
Query: GSLNYFLGLEVFRCSDGYLLSQAKYASDLLARSGITNFNTASTPLDLNVHLTPYDGVPLEDVSLYWQLVGSLIYLTVTRPDIAYVVHIVSQFMAAP
GSLNYFLGLEV R SDGYLLSQAKYASDLLARSGIT+ NTASTPLD NVHLTPYDGVPLE+VSLY QLVGSLIYLTVTRPDIAY VHIVSQFMAAP
Subjt: GSLNYFLGLEVFRCSDGYLLSQAKYASDLLARSGITNFNTASTPLDLNVHLTPYDGVPLEDVSLYWQLVGSLIYLTVTRPDIAYVVHIVSQFMAAP
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| A0A5D3DD70 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 6.4e-185 | 70.97 | Show/hide |
Query: LPSSVLQNIFSFERLYGIPPNYSNLKVFGCACFVLLHPHEHTKLEPRVRLCCFLGYGTEYKGFRCSDPLSNRLRISRHVTFCEHTMFSRLSSFHASFSSP
LPS VLQNI FE+LYG PPNYSNLKVFGCACFVLLHPHEHTKLEPR RLCCFLGYGTE+KGFRC DPLSNRLRISRHVTF EHTMFSRLSSFH SFSSP
Subjt: LPSSVLQNIFSFERLYGIPPNYSNLKVFGCACFVLLHPHEHTKLEPRVRLCCFLGYGTEYKGFRCSDPLSNRLRISRHVTFCEHTMFSRLSSFHASFSSP
Query: QSFFIDTFIDLFPLSESTPDND-----PLAASG-------------------------------------------------------------------
QSFF DT IDLFPL ESTPDN+ P +A+
Subjt: QSFFIDTFIDLFPLSESTPDND-----PLAASG-------------------------------------------------------------------
Query: ---------------------------------------SAHLVAKGYSKEYGIDYEETFAPVARMTSVRSLLAVAAAKQWSLLQMDVKNAFLNGTLFEE
A LVAKGYS+E+GIDYEETFAPVARMTSVRSLLAVAAAKQW LLQMDVKNAFLNGTL EE
Subjt: ---------------------------------------SAHLVAKGYSKEYGIDYEETFAPVARMTSVRSLLAVAAAKQWSLLQMDVKNAFLNGTLFEE
Query: VYMKPPPGTSSPPHKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSLHDTALFTRHTPQGIVLLLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDL
VYMKPPPGTSSPPHKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSS HDTALFTRHTPQGIVLLLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDL
Subjt: VYMKPPPGTSSPPHKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSLHDTALFTRHTPQGIVLLLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDL
Query: GSLNYFLGLEVFRCSDGYLLSQAKYASDLLARSGITNFNTASTPLDLNVHLTPYDGVPLEDVSLYWQLVGSLIYLTVTRPDIAYVVHIVSQFMAAP
GSLNYFLGLEV R SDGYLLSQAKYASDLLARSGIT+ NTASTPLD NVHLTPYDGVPLE+VSLY QLVGSLIYLTVTRPDIAY VHIVSQFMAAP
Subjt: GSLNYFLGLEVFRCSDGYLLSQAKYASDLLARSGITNFNTASTPLDLNVHLTPYDGVPLEDVSLYWQLVGSLIYLTVTRPDIAYVVHIVSQFMAAP
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| SwissProt top hits | e value | %identity | Alignment |
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| P04146 Copia protein | 4.0e-43 | 39.15 | Show/hide |
Query: AHLVAKGYSKEYGIDYEETFAPVARMTSVRSLLAVAAAKQWSLLQMDVKNAFLNGTLFEEVYMKPPPGTSSPPHKVCLLRRALYGLKQAPRAWFATFSST
A LVA+G++++Y IDYEETFAPVAR++S R +L++ + QMDVK AFLNGTL EE+YM+ P G S VC L +A+YGLKQA R WF F
Subjt: AHLVAKGYSKEYGIDYEETFAPVARMTSVRSLLAVAAAKQWSLLQMDVKNAFLNGTLFEEVYMKPPPGTSSPPHKVCLLRRALYGLKQAPRAWFATFSST
Query: ITQLGFTSSLHDTALF--TRHTPQGIVLLLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDLGSLNYFLGLEVFRCSDGYLLSQAKYASDLLARSGITNF
+ + F +S D ++ + + +LLYVDD++I D +++ + YL + F M DL + +F+G+ + D LSQ+ Y +L++ + N
Subjt: ITQLGFTSSLHDTALF--TRHTPQGIVLLLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDLGSLNYFLGLEVFRCSDGYLLSQAKYASDLLARSGITNF
Query: NTASTPL--DLNVHLTPYDGVPLEDVSLYWQ-LVGSLIYLTV-TRPDIAYVVHIVSQF
N STPL +N L D ED + + L+G L+Y+ + TRPD+ V+I+S++
Subjt: NTASTPL--DLNVHLTPYDGVPLEDVSLYWQ-LVGSLIYLTV-TRPDIAYVVHIVSQF
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.6e-44 | 39.93 | Show/hide |
Query: DNDPLAASGSAHLVAKGYSKEYGIDYEETFAPVARMTSVRSLLAVAAAKQWSLLQMDVKNAFLNGTLFEEVYMKPPPG--TSSPPHKVCLLRRALYGLKQ
D D A LV KG+ ++ GID++E F+PV +MTS+R++L++AA+ + Q+DVK AFL+G L EE+YM+ P G + H VC L ++LYGLKQ
Subjt: DNDPLAASGSAHLVAKGYSKEYGIDYEETFAPVARMTSVRSLLAVAAAKQWSLLQMDVKNAFLNGTLFEEVYMKPPPG--TSSPPHKVCLLRRALYGLKQ
Query: APRAWFATFSSTITQLGFTSSLHDTAL-FTRHTPQGIVLLLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDLGSLNYFLGLEVF--RCSDGYLLSQAKY
APR W+ F S + + + D + F R + ++LLLYVDDM+I G D I+ L+ L + F+MKDLG LG+++ R S LSQ KY
Subjt: APRAWFATFSSTITQLGFTSSLHDTAL-FTRHTPQGIVLLLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDLGSLNYFLGLEVF--RCSDGYLLSQAKY
Query: ASDLLARSGITNFNTASTP----LDLNVHLTPYDGVPLEDVSL--YWQLVGSLIYLTV-TRPDIAYVVHIVSQFMAAP
+L R + N STP L L+ + P +++ Y VGSL+Y V TRPDIA+ V +VS+F+ P
Subjt: ASDLLARSGITNFNTASTP----LDLNVHLTPYDGVPLEDVSL--YWQLVGSLIYLTV-TRPDIAYVVHIVSQFMAAP
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.6e-07 | 42.86 | Show/hide |
Query: NYSNLKVFGCACFVLLHPHEHTKLEPRVRLCCFLGYGTEYKGFRCSDPLSNRLRISRHVTFCE
+YS+LKVFGC F + + TKL+ + C F+GYG E G+R DP+ ++ SR V F E
Subjt: NYSNLKVFGCACFVLLHPHEHTKLEPRVRLCCFLGYGTEYKGFRCSDPLSNRLRISRHVTFCE
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| P25600 Putative transposon Ty5-1 protein YCL074W | 2.1e-28 | 34.88 | Show/hide |
Query: MDVKNAFLNGTLFEEVYMKPPPG--TSSPPHKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSLHDTALFTRHTPQGIVLLLLYVDDMIITGNDPQA
MDV AFLN T+ E +Y+K PPG P V L +YGLKQAP W ++T+ ++GF + L+ R T G + + +YVDD+++ P+
Subjt: MDVKNAFLNGTLFEEVYMKPPPG--TSSPPHKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSLHDTALFTRHTPQGIVLLLLYVDDMIITGNDPQA
Query: ISDLQHYLGQHFEMKDLGSLNYFLGLEVFRCSDGYL-LSQAKYASDLLARSGITNFNTASTPLDLNVHLTPYDGVPLEDVSLYWQLVGSLIYLTVT-RPD
++ L + + MKDLG ++ FLGL + + S+G + LS Y + + S I F TPL + L L+D++ Y +VG L++ T RPD
Subjt: ISDLQHYLGQHFEMKDLGSLNYFLGLEVFRCSDGYL-LSQAKYASDLLARSGITNFNTASTPLDLNVHLTPYDGVPLEDVSLYWQLVGSLIYLTVT-RPD
Query: IAYVVHIVSQFMAAP
I+Y V ++S+F+ P
Subjt: IAYVVHIVSQFMAAP
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 4.3e-61 | 47.67 | Show/hide |
Query: AHLVAKGYSKEYGIDYEETFAPVARMTSVRSLLAVAAAKQWSLLQMDVKNAFLNGTLFEEVYMKPPPG--TSSPPHKVCLLRRALYGLKQAPRAWFATFS
A LVAKGY++ G+DY ETF+PV + TS+R +L VA + W + Q+DV NAFL GTL ++VYM PPG P+ VC LR+ALYGLKQAPRAW+
Subjt: AHLVAKGYSKEYGIDYEETFAPVARMTSVRSLLAVAAAKQWSLLQMDVKNAFLNGTLFEEVYMKPPPG--TSSPPHKVCLLRRALYGLKQAPRAWFATFS
Query: STITQLGFTSSLHDTALFTRHTPQGIVLLLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDLGSLNYFLGLEVFRCSDGYLLSQAKYASDLLARSGITNF
+ + +GF +S+ DT+LF + IV +L+YVDD++ITGNDP + + L Q F +KD L+YFLG+E R G LSQ +Y DLLAR+ +
Subjt: STITQLGFTSSLHDTALFTRHTPQGIVLLLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDLGSLNYFLGLEVFRCSDGYLLSQAKYASDLLARSGITNF
Query: NTASTPLDLNVHLTPYDGVPLEDVSLYWQLVGSLIYLTVTRPDIAYVVHIVSQFMAAP
+TP+ + L+ Y G L D + Y +VGSL YL TRPDI+Y V+ +SQFM P
Subjt: NTASTPLDLNVHLTPYDGVPLEDVSLYWQLVGSLIYLTVTRPDIAYVVHIVSQFMAAP
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 2.3e-14 | 44.05 | Show/hide |
Query: LPSSVLQNIFSFERLYGIPPNYSNLKVFGCACFVLLHPHEHTKLEPRVRLCCFLGYGTEYKGFRCSDPLSNRLRISRHVTFCEH
LP+ +LQ F++L+G PNY L+VFGCAC+ L P+ KL+ + R C FLGY + C ++RL ISRHV F E+
Subjt: LPSSVLQNIFSFERLYGIPPNYSNLKVFGCACFVLLHPHEHTKLEPRVRLCCFLGYGTEYKGFRCSDPLSNRLRISRHVTFCEH
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 5.2e-59 | 45.74 | Show/hide |
Query: AHLVAKGYSKEYGIDYEETFAPVARMTSVRSLLAVAAAKQWSLLQMDVKNAFLNGTLFEEVYMKPPPG--TSSPPHKVCLLRRALYGLKQAPRAWFATFS
A LVAKGY++ G+DY ETF+PV + TS+R +L VA + W + Q+DV NAFL GTL +EVYM PPG P VC LR+A+YGLKQAPRAW+
Subjt: AHLVAKGYSKEYGIDYEETFAPVARMTSVRSLLAVAAAKQWSLLQMDVKNAFLNGTLFEEVYMKPPPG--TSSPPHKVCLLRRALYGLKQAPRAWFATFS
Query: STITQLGFTSSLHDTALFTRHTPQGIVLLLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDLGSLNYFLGLEVFRCSDGYLLSQAKYASDLLARSGITNF
+ + +GF +S+ DT+LF + I+ +L+YVDD++ITGND + L Q F +K+ L+YFLG+E R G LSQ +Y DLLAR+ +
Subjt: STITQLGFTSSLHDTALFTRHTPQGIVLLLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDLGSLNYFLGLEVFRCSDGYLLSQAKYASDLLARSGITNF
Query: NTASTPLDLNVHLTPYDGVPLEDVSLYWQLVGSLIYLTVTRPDIAYVVHIVSQFMAAP
+TP+ + LT + G L D + Y +VGSL YL TRPD++Y V+ +SQ+M P
Subjt: NTASTPLDLNVHLTPYDGVPLEDVSLYWQLVGSLIYLTVTRPDIAYVVHIVSQFMAAP
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 7.9e-15 | 40.59 | Show/hide |
Query: LPSSVLQNIFSFERLYGIPPNYSNLKVFGCACFVLLHPHEHTKLEPRVRLCCFLGYGTEYKGFRCSDPLSNRLRISRHVTFCEHTMFSRLSSFHASFSSP
LP+ +LQ F++L+G PPNY LKVFGCAC+ L P+ KLE + + C F+GY + C + RL SRHV F E ++F S S
Subjt: LPSSVLQNIFSFERLYGIPPNYSNLKVFGCACFVLLHPHEHTKLEPRVRLCCFLGYGTEYKGFRCSDPLSNRLRISRHVTFCEHTMFSRLSSFHASFSSP
Query: Q
Q
Subjt: Q
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