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Cmc09g0249831 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc09g0249831
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionCoatomer, beta' subunit
Genome locationCMiso1.1chr09:15791800..15792136
RNA-Seq ExpressionCmc09g0249831
SyntenyCmc09g0249831
Gene Ontology termsGO:0006886 - intracellular protein transport (biological process)
GO:0016192 - vesicle-mediated transport (biological process)
GO:0000139 - Golgi membrane (cellular component)
GO:0030117 - membrane coat (cellular component)
GO:0030663 - COPI-coated vesicle membrane (cellular component)
GO:0005198 - structural molecule activity (molecular function)
InterPro domainsIPR006692 - Coatomer, WD associated region


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG2722977.1 hypothetical protein I3760_02G151900 [Carya illinoinensis]3.0e-15100Show/hide
Query:  MCSNDFICFYDWAECRLIRRIDVNVKNLYWADSGDLVAIA
        MCSNDFICFYDWAECRLIRRIDVNVKNLYWADSGDLVAIA
Subjt:  MCSNDFICFYDWAECRLIRRIDVNVKNLYWADSGDLVAIA
KAG5537654.1 hypothetical protein RHGRI_024936 [Rhododendron griersonianum]3.0e-15100Show/hide
Query:  MCSNDFICFYDWAECRLIRRIDVNVKNLYWADSGDLVAIA
        MCSNDFICFYDWAECRLIRRIDVNVKNLYWADSGDLVAIA
Subjt:  MCSNDFICFYDWAECRLIRRIDVNVKNLYWADSGDLVAIA
XP_004252329.1 coatomer subunit beta'-1 [Solanum lycopersicum]3.0e-15100Show/hide
Query:  MCSNDFICFYDWAECRLIRRIDVNVKNLYWADSGDLVAIA
        MCSNDFICFYDWAECRLIRRIDVNVKNLYWADSGDLVAIA
Subjt:  MCSNDFICFYDWAECRLIRRIDVNVKNLYWADSGDLVAIA
XP_022955704.1 coatomer subunit beta'-2-like [Cucurbita moschata]3.0e-15100Show/hide
Query:  MCSNDFICFYDWAECRLIRRIDVNVKNLYWADSGDLVAIA
        MCSNDFICFYDWAECRLIRRIDVNVKNLYWADSGDLVAIA
Subjt:  MCSNDFICFYDWAECRLIRRIDVNVKNLYWADSGDLVAIA
XP_024030486.1 coatomer subunit beta'-3 isoform X2 [Morus notabilis]3.0e-15100Show/hide
Query:  MCSNDFICFYDWAECRLIRRIDVNVKNLYWADSGDLVAIA
        MCSNDFICFYDWAECRLIRRIDVNVKNLYWADSGDLVAIA
Subjt:  MCSNDFICFYDWAECRLIRRIDVNVKNLYWADSGDLVAIA
TrEMBL top hitse value%identityAlignment
A0A059BVC3 Coatomer subunit beta'1.4e-15100Show/hide
Query:  MCSNDFICFYDWAECRLIRRIDVNVKNLYWADSGDLVAIA
        MCSNDFICFYDWAECRLIRRIDVNVKNLYWADSGDLVAIA
Subjt:  MCSNDFICFYDWAECRLIRRIDVNVKNLYWADSGDLVAIA
A0A6I9T932 Coatomer subunit beta'1.4e-15100Show/hide
Query:  MCSNDFICFYDWAECRLIRRIDVNVKNLYWADSGDLVAIA
        MCSNDFICFYDWAECRLIRRIDVNVKNLYWADSGDLVAIA
Subjt:  MCSNDFICFYDWAECRLIRRIDVNVKNLYWADSGDLVAIA
A0A6J1ISR1 Coatomer subunit beta'1.4e-15100Show/hide
Query:  MCSNDFICFYDWAECRLIRRIDVNVKNLYWADSGDLVAIA
        MCSNDFICFYDWAECRLIRRIDVNVKNLYWADSGDLVAIA
Subjt:  MCSNDFICFYDWAECRLIRRIDVNVKNLYWADSGDLVAIA
M5WWT6 Coatomer subunit beta'1.4e-15100Show/hide
Query:  MCSNDFICFYDWAECRLIRRIDVNVKNLYWADSGDLVAIA
        MCSNDFICFYDWAECRLIRRIDVNVKNLYWADSGDLVAIA
Subjt:  MCSNDFICFYDWAECRLIRRIDVNVKNLYWADSGDLVAIA
M5WYG7 Coatomer subunit beta'1.4e-15100Show/hide
Query:  MCSNDFICFYDWAECRLIRRIDVNVKNLYWADSGDLVAIA
        MCSNDFICFYDWAECRLIRRIDVNVKNLYWADSGDLVAIA
Subjt:  MCSNDFICFYDWAECRLIRRIDVNVKNLYWADSGDLVAIA
SwissProt top hitse value%identityAlignment
Q5VQ78 Coatomer subunit beta'-13.3e-1795Show/hide
Query:  MCSNDFICFYDWAECRLIRRIDVNVKNLYWADSGDLVAIA
        MCS+DFICFYDWA+CRLIRRIDVNVKNLYWADSGDLVAIA
Subjt:  MCSNDFICFYDWAECRLIRRIDVNVKNLYWADSGDLVAIA
Q6H8D5 Coatomer subunit beta'-24.0e-1587.5Show/hide
Query:  MCSNDFICFYDWAECRLIRRIDVNVKNLYWADSGDLVAIA
        MC+NDFICF+DWAE R+IRRIDVNVKNLYWADSGDLV IA
Subjt:  MCSNDFICFYDWAECRLIRRIDVNVKNLYWADSGDLVAIA
Q8L828 Coatomer subunit beta'-34.7e-1690Show/hide
Query:  MCSNDFICFYDWAECRLIRRIDVNVKNLYWADSGDLVAIA
        MCSNDFICFYDWAECRLI++IDV VKNLYWA+SGDLVAIA
Subjt:  MCSNDFICFYDWAECRLIRRIDVNVKNLYWADSGDLVAIA
Q9C827 Coatomer subunit beta'-22.1e-1692.5Show/hide
Query:  MCSNDFICFYDWAECRLIRRIDVNVKNLYWADSGDLVAIA
        MCS+DFICFYDWAECRLI+RIDV VKNLYWADSGDLVAIA
Subjt:  MCSNDFICFYDWAECRLIRRIDVNVKNLYWADSGDLVAIA
Q9CAA0 Coatomer subunit beta'-17.3e-1795Show/hide
Query:  MCSNDFICFYDWAECRLIRRIDVNVKNLYWADSGDLVAIA
        MCS+DFICFYDWAECRLIRRIDV VKNLYWADSGDLVAIA
Subjt:  MCSNDFICFYDWAECRLIRRIDVNVKNLYWADSGDLVAIA
Arabidopsis top hitse value%identityAlignment
AT1G52360.1 Coatomer, beta' subunit1.5e-1792.5Show/hide
Query:  MCSNDFICFYDWAECRLIRRIDVNVKNLYWADSGDLVAIA
        MCS+DFICFYDWAECRLI+RIDV VKNLYWADSGDLVAIA
Subjt:  MCSNDFICFYDWAECRLIRRIDVNVKNLYWADSGDLVAIA
AT1G52360.2 Coatomer, beta' subunit1.5e-1792.5Show/hide
Query:  MCSNDFICFYDWAECRLIRRIDVNVKNLYWADSGDLVAIA
        MCS+DFICFYDWAECRLI+RIDV VKNLYWADSGDLVAIA
Subjt:  MCSNDFICFYDWAECRLIRRIDVNVKNLYWADSGDLVAIA
AT1G79990.1 structural molecules5.2e-1895Show/hide
Query:  MCSNDFICFYDWAECRLIRRIDVNVKNLYWADSGDLVAIA
        MCS+DFICFYDWAECRLIRRIDV VKNLYWADSGDLVAIA
Subjt:  MCSNDFICFYDWAECRLIRRIDVNVKNLYWADSGDLVAIA
AT1G79990.3 structural molecules5.2e-1895Show/hide
Query:  MCSNDFICFYDWAECRLIRRIDVNVKNLYWADSGDLVAIA
        MCS+DFICFYDWAECRLIRRIDV VKNLYWADSGDLVAIA
Subjt:  MCSNDFICFYDWAECRLIRRIDVNVKNLYWADSGDLVAIA
AT1G79990.5 structural molecules5.2e-1895Show/hide
Query:  MCSNDFICFYDWAECRLIRRIDVNVKNLYWADSGDLVAIA
        MCS+DFICFYDWAECRLIRRIDV VKNLYWADSGDLVAIA
Subjt:  MCSNDFICFYDWAECRLIRRIDVNVKNLYWADSGDLVAIA

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGTTCCAATGATTTTATATGTTTCTATGATTGGGCAGAGTGCAGACTGATCCGCCGTATTGATGTAAATGTGAAGAACCTTTATTGGGCTGATAGTGGTGATTTGGT
GGCAATAGCAGATTTGGTGTTAAAGTTGCTGGCAGTAGTAGAAACAAATTGTTGTGTTTTATAA
mRNA sequenceShow/hide mRNA sequence
CTAACTTTTCAGAAAAAGAGGAGTATCCGACCTACCTTTTCAGCCGAGCACATCTATGGAGGAACTCTGTTAGCCATGTGTTCCAATGATTTTATATGTTTCTATGATTG
GGCAGAGTGCAGACTGATCCGCCGTATTGATGTAAATGTGAAGAACCTTTATTGGGCTGATAGTGGTGATTTGGTGGCAATAGCAGATTTGGTGTTAAAGTTGCTGGCAG
TAGTAGAAACAAATTGTTGTGTTTTATAA
Protein sequenceShow/hide protein sequence
MCSNDFICFYDWAECRLIRRIDVNVKNLYWADSGDLVAIADLVLKLLAVVETNCCVL