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Cmc09g0249871 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc09g0249871
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionTTF-type domain-containing protein
Genome locationCMiso1.1chr09:15817928..15818652
RNA-Seq ExpressionCmc09g0249871
SyntenyCmc09g0249871
Gene Ontology termsGO:0016020 - membrane (cellular component)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008457138.1 PREDICTED: uncharacterized protein LOC103496885 [Cucumis melo]4.8e-5276.97Show/hide
Query:  MNLVNICKGLKSRKSQPITNLHHYRVEVFYTVIDMQLQELNNLFTESSTELLLSMACLNPSNSFATFDGQKLSRLAQFYPRDFSAIELSMLKDQLQNYII
        M+ + + +G KSRKSQPITNLHHYRVEVFY VIDMQLQELNN +TESSTELLL +ACLNPSNSF  F+ QKLSRLAQF+PR+FSAIELSML+DQ QNYII
Subjt:  MNLVNICKGLKSRKSQPITNLHHYRVEVFYTVIDMQLQELNNLFTESSTELLLSMACLNPSNSFATFDGQKLSRLAQFYPRDFSAIELSMLKDQLQNYII

Query:  DMHSEFVELKSIGDLVVKMVVMKRDKIYTLVYRLLTLALILPVATAIVENIF
        D+ S+FVELKSIGD+ VKMVV KR KIY LVYRLLTLALIL +A A VE  F
Subjt:  DMHSEFVELKSIGDLVVKMVVMKRDKIYTLVYRLLTLALILPVATAIVENIF

XP_024177911.1 uncharacterized protein LOC112183810 [Rosa chinensis]4.8e-4452.31Show/hide
Query:  VLLIDFNYLSQVLQRKDQDIVNAMNLVNICK---------------------------------------GLKSRKSQPITNLHHYRVEVFYTVIDMQLQ
        VLL   N LSQ LQR+DQDIVNAMNLV +CK                                       G   R++  +TNLH YRVE+F  VIDMQLQ
Subjt:  VLLIDFNYLSQVLQRKDQDIVNAMNLVNICK---------------------------------------GLKSRKSQPITNLHHYRVEVFYTVIDMQLQ

Query:  ELNNLFTESSTELLLSMACLNPSNSFATFDGQKLSRLAQFYPRDFSAIELSMLKDQLQNYIIDMHSE--FVELKSIGDLVVKMVVMKRDKIYTLVYRLLT
        ELN+ FTE++TELLL M CLNPSNSF+ F  +KL RLAQFYP+DFSA+ L  L+D+L  YI DM S   F +LK I DL  KMV  ++DK+Y LVY L+T
Subjt:  ELNNLFTESSTELLLSMACLNPSNSFATFDGQKLSRLAQFYPRDFSAIELSMLKDQLQNYIIDMHSE--FVELKSIGDLVVKMVVMKRDKIYTLVYRLLT

Query:  LALILPVATAIVENIF
        L LILPVATA VE  F
Subjt:  LALILPVATAIVENIF

XP_024184408.1 zinc finger MYM-type protein 1-like [Rosa chinensis]4.8e-4453.7Show/hide
Query:  VLLIDFNYLSQVLQRKDQDIVNAMNLVNICK--------------------------------------GLKSRKSQP-ITNLHHYRVEVFYTVIDMQLQ
        VLL   N LSQ LQR+DQDIVNAMNLV +CK                                        KSR+  P +TNLH YRVE+F  VIDMQLQ
Subjt:  VLLIDFNYLSQVLQRKDQDIVNAMNLVNICK--------------------------------------GLKSRKSQP-ITNLHHYRVEVFYTVIDMQLQ

Query:  ELNNLFTESSTELLLSMACLNPSNSFATFDGQKLSRLAQFYPRDFSAIELSMLKDQLQNYIIDMHSE--FVELKSIGDLVVKMVVMKRDKIYTLVYRLLT
        ELN+ FTE++TELLL MACLNPSNSF+ F  +KL RLAQFYP+DFSA+ L  L+D+L  YI DM S   F +LK I DL  KMV  ++DK+Y LVY L+T
Subjt:  ELNNLFTESSTELLLSMACLNPSNSFATFDGQKLSRLAQFYPRDFSAIELSMLKDQLQNYIIDMHSE--FVELKSIGDLVVKMVVMKRDKIYTLVYRLLT

Query:  LALILPVATAIVENIF
        L LILPVATA VE  F
Subjt:  LALILPVATAIVENIF

XP_024190666.1 uncharacterized protein LOC112194680 [Rosa chinensis]2.2e-4452.78Show/hide
Query:  VLLIDFNYLSQVLQRKDQDIVNAMNLVNICK---------------------------------------GLKSRKSQPITNLHHYRVEVFYTVIDMQLQ
        VLL   N LSQ LQR+DQDIVNAMNLV +CK                                       G   R++  +TNLH YRVE+F  VIDMQLQ
Subjt:  VLLIDFNYLSQVLQRKDQDIVNAMNLVNICK---------------------------------------GLKSRKSQPITNLHHYRVEVFYTVIDMQLQ

Query:  ELNNLFTESSTELLLSMACLNPSNSFATFDGQKLSRLAQFYPRDFSAIELSMLKDQLQNYIIDMHSE--FVELKSIGDLVVKMVVMKRDKIYTLVYRLLT
        ELN+ FTE++TELLL MACLNPSNSF+ F  +KL RLAQFYP+DFSA+ L  L+D+L  YI DM S   F +LK I DL  KMV  ++DK+Y LVY L+T
Subjt:  ELNNLFTESSTELLLSMACLNPSNSFATFDGQKLSRLAQFYPRDFSAIELSMLKDQLQNYIIDMHSE--FVELKSIGDLVVKMVVMKRDKIYTLVYRLLT

Query:  LALILPVATAIVENIF
        L LILPVATA VE  F
Subjt:  LALILPVATAIVENIF

XP_028064755.1 uncharacterized protein LOC114267878 [Camellia sinensis]7.4e-4554.08Show/hide
Query:  LSQVLQRKDQDIVNAMNLVN------------ICKGLKSRKSQPITNLHHYRVEVFYTVIDMQLQELNNLFTESSTELLLSMACLNPSNSFATFDGQKLS
        LSQ LQRKDQDI+NAMNLV             + +G +  K+Q ITNLHHYR E+FYT++DMQ++ELN  FT+S+T LLL +A  NPSNSF++FD + L 
Subjt:  LSQVLQRKDQDIVNAMNLVN------------ICKGLKSRKSQPITNLHHYRVEVFYTVIDMQLQELNNLFTESSTELLLSMACLNPSNSFATFDGQKLS

Query:  RLAQFYPRDFSAIELSMLKDQLQNYIIDM--HSEFVELKSIGDLVVKMVVMKRDKIYTLVYRLLTLALILPVATAIVENI-FCYEYCEDSTAQSNG
         LA+FYP +FS +EL +  DQ   YI+D+   SE   L  I +L  KMV   RDK+Y LVY LLTLALI P+AT IVE + F YEY E+S  +SNG
Subjt:  RLAQFYPRDFSAIELSMLKDQLQNYIIDM--HSEFVELKSIGDLVVKMVVMKRDKIYTLVYRLLTLALILPVATAIVENI-FCYEYCEDSTAQSNG

TrEMBL top hitse value%identityAlignment
A0A1Q3B0I1 Dimer_Tnp_hAT domain-containing protein5.4e-4151.72Show/hide
Query:  NYLSQVLQRKDQDIVNAMNLVNICK--------------------------------GLKSRKSQPITNLHHYRVEVFYTVIDMQLQELNNLFTESSTEL
        N LSQ LQRKDQDIVNAM LV + K                                G   R+ + +TNLHHY+VE+FY+VIDMQLQEL   F + +TEL
Subjt:  NYLSQVLQRKDQDIVNAMNLVNICK--------------------------------GLKSRKSQPITNLHHYRVEVFYTVIDMQLQELNNLFTESSTEL

Query:  LLSMACLNPSNSFATFDGQKLSRLAQFYPRDFSAIELSMLKDQLQNYIIDMHS--EFVELKSIGDLVVKMVVMKRDKIYTLVYRLLTLALILPVATAIVE
        LL MACLNPS+SF+ FD  KL R AQFY  +FS++EL +L DQL+ YIIDM S  +  ELK IGDL  K+V  K+  +Y LVY+L+  ALILPVATA VE
Subjt:  LLSMACLNPSNSFATFDGQKLSRLAQFYPRDFSAIELSMLKDQLQNYIIDMHS--EFVELKSIGDLVVKMVVMKRDKIYTLVYRLLTLALILPVATAIVE

Query:  NIF
         +F
Subjt:  NIF

A0A1S3C638 uncharacterized protein LOC1034968852.3e-5276.97Show/hide
Query:  MNLVNICKGLKSRKSQPITNLHHYRVEVFYTVIDMQLQELNNLFTESSTELLLSMACLNPSNSFATFDGQKLSRLAQFYPRDFSAIELSMLKDQLQNYII
        M+ + + +G KSRKSQPITNLHHYRVEVFY VIDMQLQELNN +TESSTELLL +ACLNPSNSF  F+ QKLSRLAQF+PR+FSAIELSML+DQ QNYII
Subjt:  MNLVNICKGLKSRKSQPITNLHHYRVEVFYTVIDMQLQELNNLFTESSTELLLSMACLNPSNSFATFDGQKLSRLAQFYPRDFSAIELSMLKDQLQNYII

Query:  DMHSEFVELKSIGDLVVKMVVMKRDKIYTLVYRLLTLALILPVATAIVENIF
        D+ S+FVELKSIGD+ VKMVV KR KIY LVYRLLTLALIL +A A VE  F
Subjt:  DMHSEFVELKSIGDLVVKMVVMKRDKIYTLVYRLLTLALILPVATAIVENIF

A0A6P5RIK3 uncharacterized protein LOC1107468978.9e-4460.23Show/hide
Query:  NYLSQVLQRKDQDIVNAMNLVNICKGLKSRKSQPITNLHHYRVEVFYTVIDMQLQELNNLFTESSTELLLSMACLNPSNSFATFDGQKLSRLAQFYPRDF
        N LSQ LQR +QDIVNAM+LV + +G   R    ITN+H+YRV+ FY VI +QLQELN+ F E++TELLL +ACL+P++SF++FD QKL RLAQ YP DF
Subjt:  NYLSQVLQRKDQDIVNAMNLVNICKGLKSRKSQPITNLHHYRVEVFYTVIDMQLQELNNLFTESSTELLLSMACLNPSNSFATFDGQKLSRLAQFYPRDF

Query:  SAIELSMLKDQLQNYIIDMHS--EFVELKSIGDLVVKMVVMKRDKIYTLVYRLLTLALILPVATAIVENIF
        S+ EL +LKDQLQ YI DMHS   F EL+ I  L  K+V  K+DK Y LVY L+ LAL LPVATA VE  F
Subjt:  SAIELSMLKDQLQNYIIDMHS--EFVELKSIGDLVVKMVVMKRDKIYTLVYRLLTLALILPVATAIVENIF

A0A6P5TKH2 zinc finger MYM-type protein 1-like3.2e-4166.44Show/hide
Query:  GLKSRKSQPITNLHHYRVEVFYTVIDMQLQELNNLFTESSTELLLSMACLNPSNSFATFDGQKLSRLAQFYPRDFSAIELSMLKDQLQNYIIDMHS--EF
        G   RK+QPITNLHHYRV++F  VID+QL+ELN+ F E +TELLL MACL+PSNSF+ FD  KL RLAQFYPRDFS  +L +L+DQL+NYI D+ S  EF
Subjt:  GLKSRKSQPITNLHHYRVEVFYTVIDMQLQELNNLFTESSTELLLSMACLNPSNSFATFDGQKLSRLAQFYPRDFSAIELSMLKDQLQNYIIDMHS--EF

Query:  VELKSIGDLVVKMVVMKRDKIYTLVYRLLTLALILPVATAIVENIF
         ELK I DL  KMV   +DKIY LVY LLTLALIL VATA VE +F
Subjt:  VELKSIGDLVVKMVVMKRDKIYTLVYRLLTLALILPVATAIVENIF

V4SR60 TTF-type domain-containing protein (Fragment)5.2e-4460.23Show/hide
Query:  NYLSQVLQRKDQDIVNAMNLVNICKGLKSRKSQPITNLHHYRVEVFYTVIDMQLQELNNLFTESSTELLLSMACLNPSNSFATFDGQKLSRLAQFYPRDF
        N LS+ LQRKDQDI+NA+ LV + K    +    ITNLH YRVE+FY V+DMQLQELNN F ES+ ELL+ +ACL P++ FA FD +KL RLA+FYP+DF
Subjt:  NYLSQVLQRKDQDIVNAMNLVNICKGLKSRKSQPITNLHHYRVEVFYTVIDMQLQELNNLFTESSTELLLSMACLNPSNSFATFDGQKLSRLAQFYPRDF

Query:  SAIELSMLKDQLQNYIIDMHS--EFVELKSIGDLVVKMVVMKRDKIYTLVYRLLTLALILPVATAIVENIF
        SAI+L  L+ QL  YI D+ S  EF ELK IG+L   MV  K+DK+Y LVY+L+TLALILPV TA VE +F
Subjt:  SAIELSMLKDQLQNYIIDMHS--EFVELKSIGDLVVKMVVMKRDKIYTLVYRLLTLALILPVATAIVENIF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G19260.1 TTF-type zinc finger protein with HAT dimerisation domain1.2e-3242.03Show/hide
Query:  LSQVLQRKDQDIVNAMNLVNICK--------------------------------------GLKSRKSQPITNLHHYRVEVFYTVIDMQLQELNNLFTES
        LS+ LQRKDQDI+NA++LV   K                                        + RK   ITNLHHY+V+ FYTV+DMQLQE N+ F E 
Subjt:  LSQVLQRKDQDIVNAMNLVNICK--------------------------------------GLKSRKSQPITNLHHYRVEVFYTVIDMQLQELNNLFTES

Query:  STELLLSMACLNPSNSFATFDGQKLSRLAQFYPRDFSAIELSMLKDQLQNYIIDMHSE--FVELKSIGDLVVKMVVMKRDKIYTLVYRLLTLALILPVAT
        ++ELL+ M+ L+P +SF  FD   L RL +FYP DFS +E   L  QL+ Y+ ++ ++  F +LK +GDL   MV  ++   + LVYRLL ++LILPVAT
Subjt:  STELLLSMACLNPSNSFATFDGQKLSRLAQFYPRDFSAIELSMLKDQLQNYIIDMHSE--FVELKSIGDLVVKMVVMKRDKIYTLVYRLLTLALILPVAT

Query:  AIVENIF
        A VE  F
Subjt:  AIVENIF

AT2G06541.1 TTF-type zinc finger protein with HAT dimerisation domain2.1e-2138.86Show/hide
Query:  LFTFIVLLIDF-----------NYLSQVLQRKDQDIVNAMNLVNICKGLKSRKSQPITNLHHYRVEVFYTVIDMQLQELNNLFTESSTELLLSMACLNPS
        LF+FI+ ++++              +  LQRKDQDI+NAM+LV      KS K Q + NL     + F    ++ L E N+ F E +TELL  +A L+P+
Subjt:  LFTFIVLLIDF-----------NYLSQVLQRKDQDIVNAMNLVNICKGLKSRKSQPITNLHHYRVEVFYTVIDMQLQELNNLFTESSTELLLSMACLNPS

Query:  NSFATFDGQKLSRLAQFYPRDFSAIELSMLKDQLQNYIIDMHSE--FVELKSIGDLVVKMVVMKRDKIYTLVYRLLTLALILPVATAIVENIF
        + F  FD  K+ RLA+FYP+DF+ ++   L+ QL  YI ++  +  F  LKS+GDL   M+  ++   +  VYRLL + L LP+ATA VE  F
Subjt:  NSFATFDGQKLSRLAQFYPRDFSAIELSMLKDQLQNYIIDMHSE--FVELKSIGDLVVKMVVMKRDKIYTLVYRLLTLALILPVATAIVENIF

AT2G06541.2 TTF-type zinc finger protein with HAT dimerisation domain9.4e-2243.03Show/hide
Query:  LQRKDQDIVNAMNLVNICKGLKSRKSQPITNLHHYRVEVFYTVIDMQLQELNNLFTESSTELLLSMACLNPSNSFATFDGQKLSRLAQFYPRDFSAIELS
        LQRKDQDI+NAM+LV      KS K Q + NL     + F    ++ L E N+ F E +TELL  +A L+P++ F  FD  K+ RLA+FYP+DF+ ++  
Subjt:  LQRKDQDIVNAMNLVNICKGLKSRKSQPITNLHHYRVEVFYTVIDMQLQELNNLFTESSTELLLSMACLNPSNSFATFDGQKLSRLAQFYPRDFSAIELS

Query:  MLKDQLQNYIIDMHSE--FVELKSIGDLVVKMVVMKRDKIYTLVYRLLTLALILPVATAIVENIF
         L+ QL  YI ++  +  F  LKS+GDL   M+  ++   +  VYRLL + L LP+ATA VE  F
Subjt:  MLKDQLQNYIIDMHSE--FVELKSIGDLVVKMVVMKRDKIYTLVYRLLTLALILPVATAIVENIF

AT3G29765.1 General transcription factor 2-related zinc finger protein7.7e-3241.55Show/hide
Query:  LSQVLQRKDQDIVNAMNLVNICK--------------------------------------GLKSRKSQPITNLHHYRVEVFYTVIDMQLQELNNLFTES
        LS+ LQRKDQDI+NA++LV   K                                        + RK   ITNLHHY+V+ FYTV+DMQLQE N+ F E 
Subjt:  LSQVLQRKDQDIVNAMNLVNICK--------------------------------------GLKSRKSQPITNLHHYRVEVFYTVIDMQLQELNNLFTES

Query:  STELLLSMACLNPSNSFATFDGQKLSRLAQFYPRDFSAIELSMLKDQLQNYIIDMHSE--FVELKSIGDLVVKMVVMKRDKIYTLVYRLLTLALILPVAT
        ++ELL+ M+ L+P +SF  FD   L RL +FYP DFS +E   L  QL+ Y+ ++ ++  F +L+ +GDL   MV  ++   + LVYRLL L+LILPVAT
Subjt:  STELLLSMACLNPSNSFATFDGQKLSRLAQFYPRDFSAIELSMLKDQLQNYIIDMHSE--FVELKSIGDLVVKMVVMKRDKIYTLVYRLLTLALILPVAT

Query:  AIVENIF
        A V   F
Subjt:  AIVENIF

AT4G09660.1 CONTAINS InterPro DOMAIN/s: Zinc finger, TTF-type (InterPro:IPR006580)2.0e-3241.04Show/hide
Query:  LSQVLQRKDQDIVNAMNLVNICK--------------------------------------GLKSRKSQPITNLHHYRVEVFYTVIDMQLQELNNLFTES
        LS+ LQRKDQDI+N ++LV   K                                        + RK   ITNLHHY+V+ FYTV+DMQLQE N+ F E 
Subjt:  LSQVLQRKDQDIVNAMNLVNICK--------------------------------------GLKSRKSQPITNLHHYRVEVFYTVIDMQLQELNNLFTES

Query:  STELLLSMACLNPSNSFATFDGQKLSRLAQFYPRDFSAIELSMLKDQLQNYIIDMHSE--FVELKSIGDLVVKMVVMKRDKIYTLVYRLLTLALILPVAT
        ++ELL+ M+ L+P +SF  FD   L RL +FYP +FS +E   L  QL+ Y+ ++ ++  F +LK  GDL   MV  ++   + LVYRLL L+LILPVAT
Subjt:  STELLLSMACLNPSNSFATFDGQKLSRLAQFYPRDFSAIELSMLKDQLQNYIIDMHSE--FVELKSIGDLVVKMVVMKRDKIYTLVYRLLTLALILPVAT

Query:  AIVENIFCYEYC
        A VE  F    C
Subjt:  AIVENIFCYEYC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATGTGCTTTTTACATTCATTGTTTTGCTCATCGACTTCAATTACTTGTCTCAAGTCTTACAAAGAAAAGATCAGGATATTGTGAATGCAATGAATTTAGTCAACAT
TTGTAAAGGGTTAAAAAGTCGAAAATCTCAACCAATTACAAATTTGCATCATTACCGCGTTGAAGTCTTCTATACTGTTATTGATATGCAACTTCAAGAGTTGAATAATC
TTTTTACTGAATCAAGTACTGAATTGCTTCTCTCTATGGCTTGTTTGAATCCGAGTAATTCATTTGCTACTTTTGATGGACAAAAACTTAGTCGACTTGCTCAGTTTTAT
CCAAGAGACTTTTCAGCTATTGAACTTTCTATGCTTAAGGATCAACTTCAAAATTACATTATTGATATGCATTCAGAGTTTGTTGAATTAAAAAGCATTGGTGATCTTGT
AGTGAAAATGGTCGTTATGAAAAGAGATAAGATCTACACATTAGTCTATCGGTTGCTCACATTAGCGTTGATTTTACCAGTTGCAACAGCTATTGTAGAGAACATTTTCT
GCTATGAATATTGTGAAGACTCGACTGCACAGTCGAATGGGAGATCAATGAATGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGAATGTGCTTTTTACATTCATTGTTTTGCTCATCGACTTCAATTACTTGTCTCAAGTCTTACAAAGAAAAGATCAGGATATTGTGAATGCAATGAATTTAGTCAACAT
TTGTAAAGGGTTAAAAAGTCGAAAATCTCAACCAATTACAAATTTGCATCATTACCGCGTTGAAGTCTTCTATACTGTTATTGATATGCAACTTCAAGAGTTGAATAATC
TTTTTACTGAATCAAGTACTGAATTGCTTCTCTCTATGGCTTGTTTGAATCCGAGTAATTCATTTGCTACTTTTGATGGACAAAAACTTAGTCGACTTGCTCAGTTTTAT
CCAAGAGACTTTTCAGCTATTGAACTTTCTATGCTTAAGGATCAACTTCAAAATTACATTATTGATATGCATTCAGAGTTTGTTGAATTAAAAAGCATTGGTGATCTTGT
AGTGAAAATGGTCGTTATGAAAAGAGATAAGATCTACACATTAGTCTATCGGTTGCTCACATTAGCGTTGATTTTACCAGTTGCAACAGCTATTGTAGAGAACATTTTCT
GCTATGAATATTGTGAAGACTCGACTGCACAGTCGAATGGGAGATCAATGAATGAATGA
Protein sequenceShow/hide protein sequence
MNVLFTFIVLLIDFNYLSQVLQRKDQDIVNAMNLVNICKGLKSRKSQPITNLHHYRVEVFYTVIDMQLQELNNLFTESSTELLLSMACLNPSNSFATFDGQKLSRLAQFY
PRDFSAIELSMLKDQLQNYIIDMHSEFVELKSIGDLVVKMVVMKRDKIYTLVYRLLTLALILPVATAIVENIFCYEYCEDSTAQSNGRSMNE