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Cmc09g0249911 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc09g0249911
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionReverse transcriptase Ty1/copia-type domain-containing protein
Genome locationCMiso1.1chr09:15867350..15868066
RNA-Seq ExpressionCmc09g0249911
SyntenyCmc09g0249911
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048296.1 putative mitochondrial protein [Cucumis melo var. makuwa]3.7e-2267.86Show/hide
Query:  MVWIRSLLTDLNIILHHPPVLWCDNLSAGHLSVNFVLHSKTKHVEIDIYYVCDLVFQRKIEVCHLLAIEQIADVLTKPLSVVNF
        +VWIRSLL DL I L  PP+LWCDNLSA HLS N +LHSKTKHVE+DIY+V DL+ + K+ V HL A EQIAD+LTKPLS  +F
Subjt:  MVWIRSLLTDLNIILHHPPVLWCDNLSAGHLSVNFVLHSKTKHVEIDIYYVCDLVFQRKIEVCHLLAIEQIADVLTKPLSVVNF

KAA0059238.1 putative mitochondrial protein [Cucumis melo var. makuwa]4.1e-2168.75Show/hide
Query:  MVWIRSLLTDLNIILHHPPVLWCDNLSAGHLSVNFVLHSKTKHVEIDIYYVCDLVFQRKIEVCHLLAIEQIADVLTKPLS
        +VWIRSLL DL I L  PP+LWCDNLSA HLS N +LHS TKHVE+DIY+V DL+ + K+ V HL A EQIAD+LTKPLS
Subjt:  MVWIRSLLTDLNIILHHPPVLWCDNLSAGHLSVNFVLHSKTKHVEIDIYYVCDLVFQRKIEVCHLLAIEQIADVLTKPLS

KAA0063213.1 putative mitochondrial protein [Cucumis melo var. makuwa]5.3e-2167.5Show/hide
Query:  MVWIRSLLTDLNIILHHPPVLWCDNLSAGHLSVNFVLHSKTKHVEIDIYYVCDLVFQRKIEVCHLLAIEQIADVLTKPLS
        +VWIRSLL DL I L  PP+LWCDNLSA HLS N +LHS TKHVE+DIY+V DL+ + K+ + HL A EQIAD+LTKPLS
Subjt:  MVWIRSLLTDLNIILHHPPVLWCDNLSAGHLSVNFVLHSKTKHVEIDIYYVCDLVFQRKIEVCHLLAIEQIADVLTKPLS

XP_016902754.1 PREDICTED: uncharacterized mitochondrial protein AtMg00810-like [Cucumis melo]3.7e-2267.86Show/hide
Query:  MVWIRSLLTDLNIILHHPPVLWCDNLSAGHLSVNFVLHSKTKHVEIDIYYVCDLVFQRKIEVCHLLAIEQIADVLTKPLSVVNF
        +VWIRSLL DL I L  PP+LWCDNLSA HLS N +LHSKTKHVE+DIY+V DL+ + K+ V HL A EQIAD+LTKPLS  +F
Subjt:  MVWIRSLLTDLNIILHHPPVLWCDNLSAGHLSVNFVLHSKTKHVEIDIYYVCDLVFQRKIEVCHLLAIEQIADVLTKPLSVVNF

XP_016903397.1 PREDICTED: uncharacterized mitochondrial protein AtMg00810-like [Cucumis melo]5.3e-2167.5Show/hide
Query:  MVWIRSLLTDLNIILHHPPVLWCDNLSAGHLSVNFVLHSKTKHVEIDIYYVCDLVFQRKIEVCHLLAIEQIADVLTKPLS
        +VWIRSLL DL I L  PP+LWCDNLSA HLS N +LHS TKHVE+DIY+V DL+ + K+ + HL A EQIAD+LTKPLS
Subjt:  MVWIRSLLTDLNIILHHPPVLWCDNLSAGHLSVNFVLHSKTKHVEIDIYYVCDLVFQRKIEVCHLLAIEQIADVLTKPLS

TrEMBL top hitse value%identityAlignment
A0A1S4E3F1 uncharacterized mitochondrial protein AtMg00810-like1.8e-2267.86Show/hide
Query:  MVWIRSLLTDLNIILHHPPVLWCDNLSAGHLSVNFVLHSKTKHVEIDIYYVCDLVFQRKIEVCHLLAIEQIADVLTKPLSVVNF
        +VWIRSLL DL I L  PP+LWCDNLSA HLS N +LHSKTKHVE+DIY+V DL+ + K+ V HL A EQIAD+LTKPLS  +F
Subjt:  MVWIRSLLTDLNIILHHPPVLWCDNLSAGHLSVNFVLHSKTKHVEIDIYYVCDLVFQRKIEVCHLLAIEQIADVLTKPLSVVNF

A0A1S4E598 uncharacterized mitochondrial protein AtMg00810-like2.6e-2167.5Show/hide
Query:  MVWIRSLLTDLNIILHHPPVLWCDNLSAGHLSVNFVLHSKTKHVEIDIYYVCDLVFQRKIEVCHLLAIEQIADVLTKPLS
        +VWIRSLL DL I L  PP+LWCDNLSA HLS N +LHS TKHVE+DIY+V DL+ + K+ + HL A EQIAD+LTKPLS
Subjt:  MVWIRSLLTDLNIILHHPPVLWCDNLSAGHLSVNFVLHSKTKHVEIDIYYVCDLVFQRKIEVCHLLAIEQIADVLTKPLS

A0A5A7UVQ3 Putative mitochondrial protein2.0e-2168.75Show/hide
Query:  MVWIRSLLTDLNIILHHPPVLWCDNLSAGHLSVNFVLHSKTKHVEIDIYYVCDLVFQRKIEVCHLLAIEQIADVLTKPLS
        +VWIRSLL DL I L  PP+LWCDNLSA HLS N +LHS TKHVE+DIY+V DL+ + K+ V HL A EQIAD+LTKPLS
Subjt:  MVWIRSLLTDLNIILHHPPVLWCDNLSAGHLSVNFVLHSKTKHVEIDIYYVCDLVFQRKIEVCHLLAIEQIADVLTKPLS

A0A5A7V553 Putative mitochondrial protein2.6e-2167.5Show/hide
Query:  MVWIRSLLTDLNIILHHPPVLWCDNLSAGHLSVNFVLHSKTKHVEIDIYYVCDLVFQRKIEVCHLLAIEQIADVLTKPLS
        +VWIRSLL DL I L  PP+LWCDNLSA HLS N +LHS TKHVE+DIY+V DL+ + K+ + HL A EQIAD+LTKPLS
Subjt:  MVWIRSLLTDLNIILHHPPVLWCDNLSAGHLSVNFVLHSKTKHVEIDIYYVCDLVFQRKIEVCHLLAIEQIADVLTKPLS

A0A5D3CFS1 Putative mitochondrial protein1.8e-2267.86Show/hide
Query:  MVWIRSLLTDLNIILHHPPVLWCDNLSAGHLSVNFVLHSKTKHVEIDIYYVCDLVFQRKIEVCHLLAIEQIADVLTKPLSVVNF
        +VWIRSLL DL I L  PP+LWCDNLSA HLS N +LHSKTKHVE+DIY+V DL+ + K+ V HL A EQIAD+LTKPLS  +F
Subjt:  MVWIRSLLTDLNIILHHPPVLWCDNLSAGHLSVNFVLHSKTKHVEIDIYYVCDLVFQRKIEVCHLLAIEQIADVLTKPLSVVNF

SwissProt top hitse value%identityAlignment
P04146 Copia protein3.2e-0530.12Show/hide
Query:  VWIRSLLTDLNIILHHPPVLWCDNLSAGHLSVNFVLHSKTKHVEIDIYYVCDLVFQRKIEVCHLLAIEQIADVLTKPLSVVNF
        +W++ LLT +NI L +P  ++ DN     ++ N   H + KH++I  ++  + V    I + ++    Q+AD+ TKPL    F
Subjt:  VWIRSLLTDLNIILHHPPVLWCDNLSAGHLSVNFVLHSKTKHVEIDIYYVCDLVFQRKIEVCHLLAIEQIADVLTKPLSVVNF

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-941.1e-0533.33Show/hide
Query:  MVWIRSLLTDLNIILHHPP-VLWCDNLSAGHLSVNFVLHSKTKHVEIDIYYVCDLVFQRKIEVCHLLAIEQIADVLTK
        M+W++  L +L   LH    V++CD+ SA  LS N + H++TKH+++  +++ ++V    ++V  +   E  AD+LTK
Subjt:  MVWIRSLLTDLNIILHHPP-VLWCDNLSAGHLSVNFVLHSKTKHVEIDIYYVCDLVFQRKIEVCHLLAIEQIADVLTK

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE16.5e-1446.43Show/hide
Query:  MVWIRSLLTDLNIILHHPPVLWCDNLSAGHLSVNFVLHSKTKHVEIDIYYVCDLVFQRKIEVCHLLAIEQIADVLTKPLSVVNF
        M WI SLLT+L I L  PPV++CDN+ A +L  N V HS+ KH+ ID +++ + V    + V H+   +Q+AD LTKPLS   F
Subjt:  MVWIRSLLTDLNIILHHPPVLWCDNLSAGHLSVNFVLHSKTKHVEIDIYYVCDLVFQRKIEVCHLLAIEQIADVLTKPLSVVNF

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE25.9e-1547.56Show/hide
Query:  WIRSLLTDLNIILHHPPVLWCDNLSAGHLSVNFVLHSKTKHVEIDIYYVCDLVFQRKIEVCHLLAIEQIADVLTKPLSVVNF
        WI SLLT+L I L HPPV++CDN+ A +L  N V HS+ KH+ +D +++ + V    + V H+   +Q+AD LTKPLS V F
Subjt:  WIRSLLTDLNIILHHPPVLWCDNLSAGHLSVNFVLHSKTKHVEIDIYYVCDLVFQRKIEVCHLLAIEQIADVLTKPLSVVNF

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 81.0e-0639.22Show/hide
Query:  MVWIRSLLTDLNIILHHPPVLWCDNLSAGHLSVNFVLHSKTKHVEIDIYYV
        M+W+     +L + L  P +L+CDN +A H++ N V H +TKH+E D + V
Subjt:  MVWIRSLLTDLNIILHHPPVLWCDNLSAGHLSVNFVLHSKTKHVEIDIYYV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTATGGATTCGTTCTCTTTTAACTGATCTTAATATTATCTTACATCATCCCCCTGTTTTGTGGTGTGACAACTTAAGTGCAGGTCATCTAAGTGTTAATTTTGTACT
CCACTCCAAAACAAAACATGTTGAGATCGATATTTACTATGTTTGTGACTTGGTGTTTCAAAGAAAAATAGAAGTTTGCCATCTTCTAGCCATTGAACAAATAGCGGATG
TTCTCACCAAACCATTGTCAGTCGTAAATTTTTAA
mRNA sequenceShow/hide mRNA sequence
GACGACAGAAAATTCACTTTTGGCTTTTGTGTCTATCTTGGTGGTAACTTAATTTCATGGGGCTCCAAGAATCAATCTATAATCTCTCGTTCAAGCATAGAAGTGGAGTG
TCTTTGTCTTGCTCTTGTGGCTACGAAAATGGTATGGATTCGTTCTCTTTTAACTGATCTTAATATTATCTTACATCATCCCCCTGTTTTGTGGTGTGACAACTTAAGTG
CAGGTCATCTAAGTGTTAATTTTGTACTCCACTCCAAAACAAAACATGTTGAGATCGATATTTACTATGTTTGTGACTTGGTGTTTCAAAGAAAAATAGAAGTTTGCCAT
CTTCTAGCCATTGAACAAATAGCGGATGTTCTCACCAAACCATTGTCAGTCGTAAATTTTTAAAAATTCAAACGAAAACTCACTATGGTTGATGCTGCTGCCCTTGGTTT
ACAGGGGGTGTTAAGGCAGCCCATTAACAAGCCAAATTTTGCTCTCTTATTCTTTATTCCTTTTATGTATAAAGCCCAAATGATGAGGGTTATTTTCTGATATTTTTTAG
TTATAATTTGTCGTGGGTGAGTGTAGGGTAAGAGTTTTTCCACCCAAGCTTTCTATATATACTTACAATCATGTACTCCAAAAATCATGGAATCATATATATAAAAAGCT
AGGGTTTTCTATAGCTAATTCTTTCTCTTCTACAATGCTTTTTCATTCTTGAGTATG
Protein sequenceShow/hide protein sequence
MVWIRSLLTDLNIILHHPPVLWCDNLSAGHLSVNFVLHSKTKHVEIDIYYVCDLVFQRKIEVCHLLAIEQIADVLTKPLSVVNF