; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc09g0249981 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc09g0249981
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionReverse transcriptase
Genome locationCMiso1.1chr09:15921711..15922418
RNA-Seq ExpressionCmc09g0249981
SyntenyCmc09g0249981
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0004190 - aspartic-type endopeptidase activity (molecular function)
GO:0008194 - UDP-glycosyltransferase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001584 - Integrase, catalytic core
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039213.1 pol protein [Cucumis melo var. makuwa]6.7e-13097.02Show/hide
Query:  MKREVADFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWESVSMDFITRLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVP
        MKREVADFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWESVSMDFIT LPKTLKGYTVIWVVVD+LTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVP
Subjt:  MKREVADFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWESVSMDFITRLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVP

Query:  VSIISDRDTRFTSKFWKGLQLALGTRLDFSTTFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNNYQATIGMALFEALYGKCCRSPVC
        VSIISDRDTRFTSKFWKGLQLALGTRLDFST FHPQTDGQTERLNQI EDMLRACVLEFSGSWDSHLHLMEFAYNN+YQATIGMA FEALYGKCCRSPVC
Subjt:  VSIISDRDTRFTSKFWKGLQLALGTRLDFSTTFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNNYQATIGMALFEALYGKCCRSPVC

Query:  WGEVGEQRMLGPELVQTTNAAIQKIRARMLIAQSR
        WGEVGEQRMLGPELVQTTNAAIQKIRARML AQSR
Subjt:  WGEVGEQRMLGPELVQTTNAAIQKIRARMLIAQSR

KAA0040542.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]3.3e-12996.6Show/hide
Query:  MKREVADFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWESVSMDFITRLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVP
        MKREVADFVSRCLVCQQVKAPRQ PAGLLQPLSVPGWKWESVSMDFIT LPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVP
Subjt:  MKREVADFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWESVSMDFITRLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVP

Query:  VSIISDRDTRFTSKFWKGLQLALGTRLDFSTTFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNNYQATIGMALFEALYGKCCRSPVC
        VSIISDRD RFTSKFWKGLQLALGTRLDFST FHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNN+YQATIGMA FEALYGKCCRSPVC
Subjt:  VSIISDRDTRFTSKFWKGLQLALGTRLDFSTTFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNNYQATIGMALFEALYGKCCRSPVC

Query:  WGEVGEQRMLGPELVQTTNAAIQKIRARMLIAQSR
        WGEVGEQRMLGPELVQTTN+AIQKIRARML AQSR
Subjt:  WGEVGEQRMLGPELVQTTNAAIQKIRARMLIAQSR

KAA0041490.1 hypothetical protein E6C27_scaffold6G00780 [Cucumis melo var. makuwa]2.5e-12996.6Show/hide
Query:  MKREVADFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWESVSMDFITRLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVP
        MKREVADFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWESVSMDFIT LPKTLKGYTVIWVVVDRLTKSAHFV GKSTYTASKWGQLYMTEIVRLHGVP
Subjt:  MKREVADFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWESVSMDFITRLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVP

Query:  VSIISDRDTRFTSKFWKGLQLALGTRLDFSTTFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNNYQATIGMALFEALYGKCCRSPVC
        VSIISDRDTRFTSKFWKGLQLALGTRLDFST FHPQTDG+T+RLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNN+YQATIGMALFEALYGKCCRSPVC
Subjt:  VSIISDRDTRFTSKFWKGLQLALGTRLDFSTTFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNNYQATIGMALFEALYGKCCRSPVC

Query:  WGEVGEQRMLGPELVQTTNAAIQKIRARMLIAQSR
        WGEVGEQRMLGPELVQTTNAAIQKIRARML AQS+
Subjt:  WGEVGEQRMLGPELVQTTNAAIQKIRARMLIAQSR

TYK15869.1 pol protein [Cucumis melo var. makuwa]4.3e-12996.6Show/hide
Query:  MKREVADFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWESVSMDFITRLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVP
        MKREVADFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWESVSMDFIT LPKTLKGY VIWVVVDRLTKSAHFVPGKSTYTASKW QLYMTEIVRLHGVP
Subjt:  MKREVADFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWESVSMDFITRLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVP

Query:  VSIISDRDTRFTSKFWKGLQLALGTRLDFSTTFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNNYQATIGMALFEALYGKCCRSPVC
        VSIISDRDTRFTSKFWKGLQLALGTRLDFSTTFHPQTDGQTERLNQILEDML+ACVLEFSGSWDSHLHLMEFAYNN+YQATIGM LF+ALYGKCCRSPVC
Subjt:  VSIISDRDTRFTSKFWKGLQLALGTRLDFSTTFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNNYQATIGMALFEALYGKCCRSPVC

Query:  WGEVGEQRMLGPELVQTTNAAIQKIRARMLIAQSR
        WGEVGEQRMLGPELVQTTNAAIQKIRARML AQSR
Subjt:  WGEVGEQRMLGPELVQTTNAAIQKIRARMLIAQSR

TYK18480.1 pol protein [Cucumis melo var. makuwa]6.7e-13097.02Show/hide
Query:  MKREVADFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWESVSMDFITRLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVP
        MKREVADFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWESVSMDFIT LPKTLKGYTVIWVVVD+LTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVP
Subjt:  MKREVADFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWESVSMDFITRLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVP

Query:  VSIISDRDTRFTSKFWKGLQLALGTRLDFSTTFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNNYQATIGMALFEALYGKCCRSPVC
        VSIISDRDTRFTSKFWKGLQLALGTRLDFST FHPQTDGQTERLNQI EDMLRACVLEFSGSWDSHLHLMEFAYNN+YQATIGMA FEALYGKCCRSPVC
Subjt:  VSIISDRDTRFTSKFWKGLQLALGTRLDFSTTFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNNYQATIGMALFEALYGKCCRSPVC

Query:  WGEVGEQRMLGPELVQTTNAAIQKIRARMLIAQSR
        WGEVGEQRMLGPELVQTTNAAIQKIRARML AQSR
Subjt:  WGEVGEQRMLGPELVQTTNAAIQKIRARMLIAQSR

TrEMBL top hitse value%identityAlignment
A0A5A7T8B1 Pol protein3.2e-13097.02Show/hide
Query:  MKREVADFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWESVSMDFITRLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVP
        MKREVADFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWESVSMDFIT LPKTLKGYTVIWVVVD+LTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVP
Subjt:  MKREVADFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWESVSMDFITRLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVP

Query:  VSIISDRDTRFTSKFWKGLQLALGTRLDFSTTFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNNYQATIGMALFEALYGKCCRSPVC
        VSIISDRDTRFTSKFWKGLQLALGTRLDFST FHPQTDGQTERLNQI EDMLRACVLEFSGSWDSHLHLMEFAYNN+YQATIGMA FEALYGKCCRSPVC
Subjt:  VSIISDRDTRFTSKFWKGLQLALGTRLDFSTTFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNNYQATIGMALFEALYGKCCRSPVC

Query:  WGEVGEQRMLGPELVQTTNAAIQKIRARMLIAQSR
        WGEVGEQRMLGPELVQTTNAAIQKIRARML AQSR
Subjt:  WGEVGEQRMLGPELVQTTNAAIQKIRARMLIAQSR

A0A5A7TAT0 DNA/RNA polymerases superfamily protein1.6e-12996.6Show/hide
Query:  MKREVADFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWESVSMDFITRLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVP
        MKREVADFVSRCLVCQQVKAPRQ PAGLLQPLSVPGWKWESVSMDFIT LPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVP
Subjt:  MKREVADFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWESVSMDFITRLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVP

Query:  VSIISDRDTRFTSKFWKGLQLALGTRLDFSTTFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNNYQATIGMALFEALYGKCCRSPVC
        VSIISDRD RFTSKFWKGLQLALGTRLDFST FHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNN+YQATIGMA FEALYGKCCRSPVC
Subjt:  VSIISDRDTRFTSKFWKGLQLALGTRLDFSTTFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNNYQATIGMALFEALYGKCCRSPVC

Query:  WGEVGEQRMLGPELVQTTNAAIQKIRARMLIAQSR
        WGEVGEQRMLGPELVQTTN+AIQKIRARML AQSR
Subjt:  WGEVGEQRMLGPELVQTTNAAIQKIRARMLIAQSR

A0A5A7TDX1 Reverse transcriptase1.2e-12996.6Show/hide
Query:  MKREVADFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWESVSMDFITRLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVP
        MKREVADFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWESVSMDFIT LPKTLKGYTVIWVVVDRLTKSAHFV GKSTYTASKWGQLYMTEIVRLHGVP
Subjt:  MKREVADFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWESVSMDFITRLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVP

Query:  VSIISDRDTRFTSKFWKGLQLALGTRLDFSTTFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNNYQATIGMALFEALYGKCCRSPVC
        VSIISDRDTRFTSKFWKGLQLALGTRLDFST FHPQTDG+T+RLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNN+YQATIGMALFEALYGKCCRSPVC
Subjt:  VSIISDRDTRFTSKFWKGLQLALGTRLDFSTTFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNNYQATIGMALFEALYGKCCRSPVC

Query:  WGEVGEQRMLGPELVQTTNAAIQKIRARMLIAQSR
        WGEVGEQRMLGPELVQTTNAAIQKIRARML AQS+
Subjt:  WGEVGEQRMLGPELVQTTNAAIQKIRARMLIAQSR

A0A5D3D095 Pol protein2.1e-12996.6Show/hide
Query:  MKREVADFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWESVSMDFITRLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVP
        MKREVADFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWESVSMDFIT LPKTLKGY VIWVVVDRLTKSAHFVPGKSTYTASKW QLYMTEIVRLHGVP
Subjt:  MKREVADFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWESVSMDFITRLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVP

Query:  VSIISDRDTRFTSKFWKGLQLALGTRLDFSTTFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNNYQATIGMALFEALYGKCCRSPVC
        VSIISDRDTRFTSKFWKGLQLALGTRLDFSTTFHPQTDGQTERLNQILEDML+ACVLEFSGSWDSHLHLMEFAYNN+YQATIGM LF+ALYGKCCRSPVC
Subjt:  VSIISDRDTRFTSKFWKGLQLALGTRLDFSTTFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNNYQATIGMALFEALYGKCCRSPVC

Query:  WGEVGEQRMLGPELVQTTNAAIQKIRARMLIAQSR
        WGEVGEQRMLGPELVQTTNAAIQKIRARML AQSR
Subjt:  WGEVGEQRMLGPELVQTTNAAIQKIRARMLIAQSR

A0A5D3D4M7 Pol protein3.2e-13097.02Show/hide
Query:  MKREVADFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWESVSMDFITRLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVP
        MKREVADFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWESVSMDFIT LPKTLKGYTVIWVVVD+LTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVP
Subjt:  MKREVADFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWESVSMDFITRLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVP

Query:  VSIISDRDTRFTSKFWKGLQLALGTRLDFSTTFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNNYQATIGMALFEALYGKCCRSPVC
        VSIISDRDTRFTSKFWKGLQLALGTRLDFST FHPQTDGQTERLNQI EDMLRACVLEFSGSWDSHLHLMEFAYNN+YQATIGMA FEALYGKCCRSPVC
Subjt:  VSIISDRDTRFTSKFWKGLQLALGTRLDFSTTFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNNYQATIGMALFEALYGKCCRSPVC

Query:  WGEVGEQRMLGPELVQTTNAAIQKIRARMLIAQSR
        WGEVGEQRMLGPELVQTTNAAIQKIRARML AQSR
Subjt:  WGEVGEQRMLGPELVQTTNAAIQKIRARMLIAQSR

SwissProt top hitse value%identityAlignment
P0CT34 Transposon Tf2-1 polyprotein1.0e-3236.65Show/hide
Query:  MKREVADFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWESVSMDFITRLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVP
        +++++ ++V  C  CQ  K+   +P G LQP+      WES+SMDFIT LP++  GY  ++VVVDR +K A  VP   + TA +  +++   ++   G P
Subjt:  MKREVADFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWESVSMDFITRLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVP

Query:  VSIISDRDTRFTSKFWKGLQLALGTRLDFSTTFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNNYQATIGMALFEALY
          II+D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR        +W  H+ L++ +YNN   +   M  FE ++
Subjt:  VSIISDRDTRFTSKFWKGLQLALGTRLDFSTTFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNNYQATIGMALFEALY

P0CT41 Transposon Tf2-12 polyprotein1.0e-3236.65Show/hide
Query:  MKREVADFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWESVSMDFITRLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVP
        +++++ ++V  C  CQ  K+   +P G LQP+      WES+SMDFIT LP++  GY  ++VVVDR +K A  VP   + TA +  +++   ++   G P
Subjt:  MKREVADFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWESVSMDFITRLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVP

Query:  VSIISDRDTRFTSKFWKGLQLALGTRLDFSTTFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNNYQATIGMALFEALY
          II+D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR        +W  H+ L++ +YNN   +   M  FE ++
Subjt:  VSIISDRDTRFTSKFWKGLQLALGTRLDFSTTFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNNYQATIGMALFEALY

Q7LHG5 Transposon Ty3-I Gag-Pol polyprotein1.2e-3335.32Show/hide
Query:  MKREVADFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWESVSMDFITRLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVP
        ++  +  ++  C+ CQ +K+ R R  GLLQPL +   +W  +SMDF+T LP T     +I VVVDR +K AHF+  + T  A++   L    I   HG P
Subjt:  MKREVADFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWESVSMDFITRLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVP

Query:  VSIISDRDTRFTSKFWKGLQLALGTRLDFSTTFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNNYQATIGMALFEALYGKCCRSPVC
         +I SDRD R T+  ++ L   LG +   S+  HPQTDGQ+ER  Q L  +LRA V     +W  +L  +EF YN+    T+G + FE   G    +P  
Subjt:  VSIISDRDTRFTSKFWKGLQLALGTRLDFSTTFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNNYQATIGMALFEALYGKCCRSPVC

Query:  WG--EVGEQRMLGPELVQTTNAAIQKIRARMLIAQ
            EV  +     EL +   A   + + ++  AQ
Subjt:  WG--EVGEQRMLGPELVQTTNAAIQKIRARMLIAQ

Q99315 Transposon Ty3-G Gag-Pol polyprotein3.5e-3334.89Show/hide
Query:  MKREVADFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWESVSMDFITRLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVP
        ++  +  ++  C+ CQ +K+ R R  GLLQPL +   +W  +SMDF+T LP T     +I VVVDR +K AHF+  + T  A++   L    I   HG P
Subjt:  MKREVADFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWESVSMDFITRLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVP

Query:  VSIISDRDTRFTSKFWKGLQLALGTRLDFSTTFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNNYQATIGMALFEALYGKCCRSPVC
         +I SDRD R T+  ++ L   LG +   S+  HPQTDGQ+ER  Q L  +LRA       +W  +L  +EF YN+    T+G + FE   G    +P  
Subjt:  VSIISDRDTRFTSKFWKGLQLALGTRLDFSTTFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNNYQATIGMALFEALYGKCCRSPVC

Query:  WG--EVGEQRMLGPELVQTTNAAIQKIRARMLIAQ
            EV  +     EL +   A   + + ++  AQ
Subjt:  WG--EVGEQRMLGPELVQTTNAAIQKIRARMLIAQ

Q9UR07 Transposon Tf2-11 polyprotein1.0e-3236.65Show/hide
Query:  MKREVADFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWESVSMDFITRLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVP
        +++++ ++V  C  CQ  K+   +P G LQP+      WES+SMDFIT LP++  GY  ++VVVDR +K A  VP   + TA +  +++   ++   G P
Subjt:  MKREVADFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWESVSMDFITRLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVP

Query:  VSIISDRDTRFTSKFWKGLQLALGTRLDFSTTFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNNYQATIGMALFEALY
          II+D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR        +W  H+ L++ +YNN   +   M  FE ++
Subjt:  VSIISDRDTRFTSKFWKGLQLALGTRLDFSTTFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNNYQATIGMALFEALY

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAGGGAAGTGGCAGATTTTGTCAGTAGGTGTTTGGTGTGCCAGCAGGTGAAGGCACCTAGACAGCGACCAGCCGGGTTGTTACAACCCTTGAGTGTACCAGGATG
GAAATGGGAAAGCGTGTCGATGGACTTCATCACGAGATTGCCCAAAACCCTAAAGGGCTATACAGTGATCTGGGTTGTTGTCGACAGACTCACGAAGTCGGCCCACTTTG
TGCCAGGGAAGTCCACTTACACTGCCAGTAAGTGGGGGCAGTTATATATGACAGAGATTGTGAGACTACATGGAGTACCTGTATCCATCATTTCAGACAGAGACACTCGT
TTCACATCGAAGTTCTGGAAAGGACTTCAACTTGCATTAGGTACGAGGTTAGACTTCAGCACGACATTCCACCCTCAGACTGATGGTCAGACAGAGAGATTGAACCAGAT
TTTGGAAGACATGCTGCGGGCCTGCGTGCTAGAGTTTTCAGGAAGTTGGGACTCCCATCTGCATCTGATGGAGTTCGCCTATAATAACAACTACCAGGCTACTATCGGTA
TGGCACTGTTTGAGGCTCTGTATGGTAAGTGTTGTAGATCTCCTGTCTGCTGGGGCGAGGTTGGAGAGCAGAGGATGCTAGGTCCCGAGTTAGTTCAGACCACCAATGCA
GCCATACAGAAGATCCGAGCTCGTATGCTGATAGCACAAAGCAGATAG
mRNA sequenceShow/hide mRNA sequence
ATGAAGAGGGAAGTGGCAGATTTTGTCAGTAGGTGTTTGGTGTGCCAGCAGGTGAAGGCACCTAGACAGCGACCAGCCGGGTTGTTACAACCCTTGAGTGTACCAGGATG
GAAATGGGAAAGCGTGTCGATGGACTTCATCACGAGATTGCCCAAAACCCTAAAGGGCTATACAGTGATCTGGGTTGTTGTCGACAGACTCACGAAGTCGGCCCACTTTG
TGCCAGGGAAGTCCACTTACACTGCCAGTAAGTGGGGGCAGTTATATATGACAGAGATTGTGAGACTACATGGAGTACCTGTATCCATCATTTCAGACAGAGACACTCGT
TTCACATCGAAGTTCTGGAAAGGACTTCAACTTGCATTAGGTACGAGGTTAGACTTCAGCACGACATTCCACCCTCAGACTGATGGTCAGACAGAGAGATTGAACCAGAT
TTTGGAAGACATGCTGCGGGCCTGCGTGCTAGAGTTTTCAGGAAGTTGGGACTCCCATCTGCATCTGATGGAGTTCGCCTATAATAACAACTACCAGGCTACTATCGGTA
TGGCACTGTTTGAGGCTCTGTATGGTAAGTGTTGTAGATCTCCTGTCTGCTGGGGCGAGGTTGGAGAGCAGAGGATGCTAGGTCCCGAGTTAGTTCAGACCACCAATGCA
GCCATACAGAAGATCCGAGCTCGTATGCTGATAGCACAAAGCAGATAG
Protein sequenceShow/hide protein sequence
MKREVADFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWESVSMDFITRLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDTR
FTSKFWKGLQLALGTRLDFSTTFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNNYQATIGMALFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNA
AIQKIRARMLIAQSR