; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc09g0249991 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc09g0249991
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionReverse transcriptase
Genome locationCMiso1.1chr09:15923284..15924231
RNA-Seq ExpressionCmc09g0249991
SyntenyCmc09g0249991
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0004190 - aspartic-type endopeptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR000477 - Reverse transcriptase domain
IPR043128 - Reverse transcriptase/Diguanylate cyclase domain
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0056047.1 reverse transcriptase [Cucumis melo var. makuwa]2.2e-16094.39Show/hide
Query:  MKASKLLNQGTWGILASVVDTREPEVSLSSEPVVREYPDVFPDELPRLPPPREIVFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
        MKASKLLNQGTWGIL SVVDTREPEVSLSSEPVVREYPDVFPDELP LPPPREI FAIELEPGTAPISRAPYRMAP ELKELKVQLQELLDKGFIRPSVS
Subjt:  MKASKLLNQGTWGILASVVDTREPEVSLSSEPVVREYPDVFPDELPRLPPPREIVFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS

Query:  PWGAPVLFVKKKDGSMRLCIDYRERNKVIIKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFRSRYGHYEFIIMSFDLTNAPAVFM
        PWGAPVLFVKKKDGSMRLCIDYRE NKV +KNRYPLP+IDDLFDQLQGATVFSKIDL+SGYHQLRIRDSDIPKTAFRSRY HYEFI+MSF LTNAPAVFM
Subjt:  PWGAPVLFVKKKDGSMRLCIDYRERNKVIIKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFRSRYGHYEFIIMSFDLTNAPAVFM

Query:  DLMNRVFKDFLDSFVIVFIDDILIYSKTEAKHEEHLPQVLETLRANKLYVKFSKCEFWLKKVTFLGHVVSSEGDSVDPAKIEAVTNWPRPSTVSEIRSFL
        DLMNRVFKDFLDSFVIVFIDDILIYSKTEA+HEEHL QVLETLRANKLYVKFSKCEFWLKKVTFLGHVVSSEG S+DPAKIEAVTNWPRPSTVSEI+SFL
Subjt:  DLMNRVFKDFLDSFVIVFIDDILIYSKTEAKHEEHLPQVLETLRANKLYVKFSKCEFWLKKVTFLGHVVSSEGDSVDPAKIEAVTNWPRPSTVSEIRSFL

Query:  GLA
        GLA
Subjt:  GLA

KAA0058812.1 pol protein [Cucumis melo var. makuwa]2.2e-16094.06Show/hide
Query:  MKASKLLNQGTWGILASVVDTREPEVSLSSEPVVREYPDVFPDELPRLPPPREIVFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
        MKASKLL+QGTWGILASVVD REPEVSLSSEPVVREYPDVFPDELP LPPPRE+ FAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
Subjt:  MKASKLLNQGTWGILASVVDTREPEVSLSSEPVVREYPDVFPDELPRLPPPREIVFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS

Query:  PWGAPVLFVKKKDGSMRLCIDYRERNKVIIKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFRSRYGHYEFIIMSFDLTNAPAVFM
        PWGAPVLFVKKKDGSMRLCIDYRE NKV IKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRD DIPKTAF SRYGHYEF++MSF LTNAPAVFM
Subjt:  PWGAPVLFVKKKDGSMRLCIDYRERNKVIIKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFRSRYGHYEFIIMSFDLTNAPAVFM

Query:  DLMNRVFKDFLDSFVIVFIDDILIYSKTEAKHEEHLPQVLETLRANKLYVKFSKCEFWLKKVTFLGHVVSSEGDSVDPAKIEAVTNWPRPSTVSEIRSFL
        DLMNRVFKDF+DSFVIVFIDDILIYSKTEA+HEEHL QVLETLRANKLY KFSKCEFWL+KVTFLGHVVSSEG SVDPAKIEAVTNWPRPSTVSEIRSFL
Subjt:  DLMNRVFKDFLDSFVIVFIDDILIYSKTEAKHEEHLPQVLETLRANKLYVKFSKCEFWLKKVTFLGHVVSSEGDSVDPAKIEAVTNWPRPSTVSEIRSFL

Query:  GLA
        GLA
Subjt:  GLA

KAA0060745.1 pol protein [Cucumis melo var. makuwa]9.8e-16194.06Show/hide
Query:  MKASKLLNQGTWGILASVVDTREPEVSLSSEPVVREYPDVFPDELPRLPPPREIVFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
        MKASKLL+QGTWGILASVVD REPEVSLSSEPVVREYPDVFPDELP LPPPRE+ FAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
Subjt:  MKASKLLNQGTWGILASVVDTREPEVSLSSEPVVREYPDVFPDELPRLPPPREIVFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS

Query:  PWGAPVLFVKKKDGSMRLCIDYRERNKVIIKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFRSRYGHYEFIIMSFDLTNAPAVFM
        PWGAPVLFVKKKDGSMRLCIDYRE NKV +KNRYPLP+IDDLFDQLQGATVFSKIDLRSGYHQLRIRD DIPKTAFRSRYGHYEF++MSF LTNAPAVFM
Subjt:  PWGAPVLFVKKKDGSMRLCIDYRERNKVIIKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFRSRYGHYEFIIMSFDLTNAPAVFM

Query:  DLMNRVFKDFLDSFVIVFIDDILIYSKTEAKHEEHLPQVLETLRANKLYVKFSKCEFWLKKVTFLGHVVSSEGDSVDPAKIEAVTNWPRPSTVSEIRSFL
        DLMNRVFKDFLDSFVIVFIDDILIYSKTEA+HEEHL QVLETLRANKLY KFSKCEFWL+KVTFLGHVVSSEG SVDPAKIEAVTNWPRPSTVSEIRSFL
Subjt:  DLMNRVFKDFLDSFVIVFIDDILIYSKTEAKHEEHLPQVLETLRANKLYVKFSKCEFWLKKVTFLGHVVSSEGDSVDPAKIEAVTNWPRPSTVSEIRSFL

Query:  GLA
        GLA
Subjt:  GLA

KAA0066101.1 reverse transcriptase [Cucumis melo var. makuwa]2.0e-16195.71Show/hide
Query:  MKASKLLNQGTWGILASVVDTREPEVSLSSEPVVREYPDVFPDELPRLPPPREIVFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
        MKASKLLNQGTWGILASVVDTREPEVSLSSEPVVREYPDVFPDEL  LPPPREIVFAIELEPGTAPISRAPYRMAPAELKE KVQLQELLDKGFIRPSVS
Subjt:  MKASKLLNQGTWGILASVVDTREPEVSLSSEPVVREYPDVFPDELPRLPPPREIVFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS

Query:  PWGAPVLFVKKKDGSMRLCIDYRERNKVIIKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFRSRYGHYEFIIMSFDLTNAPAVFM
        PWGAPVLFVKKKDGSMRLCIDYRE NKV IKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFRSRYGHYEFI+MSF LTNA AVFM
Subjt:  PWGAPVLFVKKKDGSMRLCIDYRERNKVIIKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFRSRYGHYEFIIMSFDLTNAPAVFM

Query:  DLMNRVFKDFLDSFVIVFIDDILIYSKTEAKHEEHLPQVLETLRANKLYVKFSKCEFWLKKVTFLGHVVSSEGDSVDPAKIEAVTNWPRPSTVSEIRSFL
        DLMNRVFKDFLDSFVIVFIDDILIYSKTEA+HEEHL QVLETLRANKLY KFSKCEFWLKKVTFLGHVVSS+G SVDPAKIEAVTNWPRPSTVSEIRSFL
Subjt:  DLMNRVFKDFLDSFVIVFIDDILIYSKTEAKHEEHLPQVLETLRANKLYVKFSKCEFWLKKVTFLGHVVSSEGDSVDPAKIEAVTNWPRPSTVSEIRSFL

Query:  GLA
        GLA
Subjt:  GLA

TYK01306.1 pol protein [Cucumis melo var. makuwa]5.7e-16194.72Show/hide
Query:  MKASKLLNQGTWGILASVVDTREPEVSLSSEPVVREYPDVFPDELPRLPPPREIVFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
        MKASKLL+QGTWGILASVVD REPEVSLSSEPVVREYPDVFPDELP LPPPRE+ FAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
Subjt:  MKASKLLNQGTWGILASVVDTREPEVSLSSEPVVREYPDVFPDELPRLPPPREIVFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS

Query:  PWGAPVLFVKKKDGSMRLCIDYRERNKVIIKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFRSRYGHYEFIIMSFDLTNAPAVFM
        PWGAPVLFVKKKDGSMRLCIDYRE NKV +KNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFR RYGHYEFI+MSF LTNAPAVFM
Subjt:  PWGAPVLFVKKKDGSMRLCIDYRERNKVIIKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFRSRYGHYEFIIMSFDLTNAPAVFM

Query:  DLMNRVFKDFLDSFVIVFIDDILIYSKTEAKHEEHLPQVLETLRANKLYVKFSKCEFWLKKVTFLGHVVSSEGDSVDPAKIEAVTNWPRPSTVSEIRSFL
        DLMNRVFKDFLDSFVIVFIDDILIYSKTEA+HEEHL QVLETLRANKLY KFSKCEFWL+KVTFLGHVVSSEG SVDPAKIEAVTNWPRPSTVSEIRSFL
Subjt:  DLMNRVFKDFLDSFVIVFIDDILIYSKTEAKHEEHLPQVLETLRANKLYVKFSKCEFWLKKVTFLGHVVSSEGDSVDPAKIEAVTNWPRPSTVSEIRSFL

Query:  GLA
        GLA
Subjt:  GLA

TrEMBL top hitse value%identityAlignment
A0A5A7UN68 Reverse transcriptase1.1e-16094.39Show/hide
Query:  MKASKLLNQGTWGILASVVDTREPEVSLSSEPVVREYPDVFPDELPRLPPPREIVFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
        MKASKLLNQGTWGIL SVVDTREPEVSLSSEPVVREYPDVFPDELP LPPPREI FAIELEPGTAPISRAPYRMAP ELKELKVQLQELLDKGFIRPSVS
Subjt:  MKASKLLNQGTWGILASVVDTREPEVSLSSEPVVREYPDVFPDELPRLPPPREIVFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS

Query:  PWGAPVLFVKKKDGSMRLCIDYRERNKVIIKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFRSRYGHYEFIIMSFDLTNAPAVFM
        PWGAPVLFVKKKDGSMRLCIDYRE NKV +KNRYPLP+IDDLFDQLQGATVFSKIDL+SGYHQLRIRDSDIPKTAFRSRY HYEFI+MSF LTNAPAVFM
Subjt:  PWGAPVLFVKKKDGSMRLCIDYRERNKVIIKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFRSRYGHYEFIIMSFDLTNAPAVFM

Query:  DLMNRVFKDFLDSFVIVFIDDILIYSKTEAKHEEHLPQVLETLRANKLYVKFSKCEFWLKKVTFLGHVVSSEGDSVDPAKIEAVTNWPRPSTVSEIRSFL
        DLMNRVFKDFLDSFVIVFIDDILIYSKTEA+HEEHL QVLETLRANKLYVKFSKCEFWLKKVTFLGHVVSSEG S+DPAKIEAVTNWPRPSTVSEI+SFL
Subjt:  DLMNRVFKDFLDSFVIVFIDDILIYSKTEAKHEEHLPQVLETLRANKLYVKFSKCEFWLKKVTFLGHVVSSEGDSVDPAKIEAVTNWPRPSTVSEIRSFL

Query:  GLA
        GLA
Subjt:  GLA

A0A5A7USG7 Reverse transcriptase1.1e-16094.06Show/hide
Query:  MKASKLLNQGTWGILASVVDTREPEVSLSSEPVVREYPDVFPDELPRLPPPREIVFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
        MKASKLL+QGTWGILASVVD REPEVSLSSEPVVREYPDVFPDELP LPPPRE+ FAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
Subjt:  MKASKLLNQGTWGILASVVDTREPEVSLSSEPVVREYPDVFPDELPRLPPPREIVFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS

Query:  PWGAPVLFVKKKDGSMRLCIDYRERNKVIIKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFRSRYGHYEFIIMSFDLTNAPAVFM
        PWGAPVLFVKKKDGSMRLCIDYRE NKV IKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRD DIPKTAF SRYGHYEF++MSF LTNAPAVFM
Subjt:  PWGAPVLFVKKKDGSMRLCIDYRERNKVIIKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFRSRYGHYEFIIMSFDLTNAPAVFM

Query:  DLMNRVFKDFLDSFVIVFIDDILIYSKTEAKHEEHLPQVLETLRANKLYVKFSKCEFWLKKVTFLGHVVSSEGDSVDPAKIEAVTNWPRPSTVSEIRSFL
        DLMNRVFKDF+DSFVIVFIDDILIYSKTEA+HEEHL QVLETLRANKLY KFSKCEFWL+KVTFLGHVVSSEG SVDPAKIEAVTNWPRPSTVSEIRSFL
Subjt:  DLMNRVFKDFLDSFVIVFIDDILIYSKTEAKHEEHLPQVLETLRANKLYVKFSKCEFWLKKVTFLGHVVSSEGDSVDPAKIEAVTNWPRPSTVSEIRSFL

Query:  GLA
        GLA
Subjt:  GLA

A0A5A7V4E4 Reverse transcriptase4.7e-16194.06Show/hide
Query:  MKASKLLNQGTWGILASVVDTREPEVSLSSEPVVREYPDVFPDELPRLPPPREIVFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
        MKASKLL+QGTWGILASVVD REPEVSLSSEPVVREYPDVFPDELP LPPPRE+ FAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
Subjt:  MKASKLLNQGTWGILASVVDTREPEVSLSSEPVVREYPDVFPDELPRLPPPREIVFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS

Query:  PWGAPVLFVKKKDGSMRLCIDYRERNKVIIKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFRSRYGHYEFIIMSFDLTNAPAVFM
        PWGAPVLFVKKKDGSMRLCIDYRE NKV +KNRYPLP+IDDLFDQLQGATVFSKIDLRSGYHQLRIRD DIPKTAFRSRYGHYEF++MSF LTNAPAVFM
Subjt:  PWGAPVLFVKKKDGSMRLCIDYRERNKVIIKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFRSRYGHYEFIIMSFDLTNAPAVFM

Query:  DLMNRVFKDFLDSFVIVFIDDILIYSKTEAKHEEHLPQVLETLRANKLYVKFSKCEFWLKKVTFLGHVVSSEGDSVDPAKIEAVTNWPRPSTVSEIRSFL
        DLMNRVFKDFLDSFVIVFIDDILIYSKTEA+HEEHL QVLETLRANKLY KFSKCEFWL+KVTFLGHVVSSEG SVDPAKIEAVTNWPRPSTVSEIRSFL
Subjt:  DLMNRVFKDFLDSFVIVFIDDILIYSKTEAKHEEHLPQVLETLRANKLYVKFSKCEFWLKKVTFLGHVVSSEGDSVDPAKIEAVTNWPRPSTVSEIRSFL

Query:  GLA
        GLA
Subjt:  GLA

A0A5A7VK60 Reverse transcriptase9.6e-16295.71Show/hide
Query:  MKASKLLNQGTWGILASVVDTREPEVSLSSEPVVREYPDVFPDELPRLPPPREIVFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
        MKASKLLNQGTWGILASVVDTREPEVSLSSEPVVREYPDVFPDEL  LPPPREIVFAIELEPGTAPISRAPYRMAPAELKE KVQLQELLDKGFIRPSVS
Subjt:  MKASKLLNQGTWGILASVVDTREPEVSLSSEPVVREYPDVFPDELPRLPPPREIVFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS

Query:  PWGAPVLFVKKKDGSMRLCIDYRERNKVIIKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFRSRYGHYEFIIMSFDLTNAPAVFM
        PWGAPVLFVKKKDGSMRLCIDYRE NKV IKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFRSRYGHYEFI+MSF LTNA AVFM
Subjt:  PWGAPVLFVKKKDGSMRLCIDYRERNKVIIKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFRSRYGHYEFIIMSFDLTNAPAVFM

Query:  DLMNRVFKDFLDSFVIVFIDDILIYSKTEAKHEEHLPQVLETLRANKLYVKFSKCEFWLKKVTFLGHVVSSEGDSVDPAKIEAVTNWPRPSTVSEIRSFL
        DLMNRVFKDFLDSFVIVFIDDILIYSKTEA+HEEHL QVLETLRANKLY KFSKCEFWLKKVTFLGHVVSS+G SVDPAKIEAVTNWPRPSTVSEIRSFL
Subjt:  DLMNRVFKDFLDSFVIVFIDDILIYSKTEAKHEEHLPQVLETLRANKLYVKFSKCEFWLKKVTFLGHVVSSEGDSVDPAKIEAVTNWPRPSTVSEIRSFL

Query:  GLA
        GLA
Subjt:  GLA

A0A5D3BSV9 Reverse transcriptase2.8e-16194.72Show/hide
Query:  MKASKLLNQGTWGILASVVDTREPEVSLSSEPVVREYPDVFPDELPRLPPPREIVFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
        MKASKLL+QGTWGILASVVD REPEVSLSSEPVVREYPDVFPDELP LPPPRE+ FAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
Subjt:  MKASKLLNQGTWGILASVVDTREPEVSLSSEPVVREYPDVFPDELPRLPPPREIVFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS

Query:  PWGAPVLFVKKKDGSMRLCIDYRERNKVIIKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFRSRYGHYEFIIMSFDLTNAPAVFM
        PWGAPVLFVKKKDGSMRLCIDYRE NKV +KNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFR RYGHYEFI+MSF LTNAPAVFM
Subjt:  PWGAPVLFVKKKDGSMRLCIDYRERNKVIIKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFRSRYGHYEFIIMSFDLTNAPAVFM

Query:  DLMNRVFKDFLDSFVIVFIDDILIYSKTEAKHEEHLPQVLETLRANKLYVKFSKCEFWLKKVTFLGHVVSSEGDSVDPAKIEAVTNWPRPSTVSEIRSFL
        DLMNRVFKDFLDSFVIVFIDDILIYSKTEA+HEEHL QVLETLRANKLY KFSKCEFWL+KVTFLGHVVSSEG SVDPAKIEAVTNWPRPSTVSEIRSFL
Subjt:  DLMNRVFKDFLDSFVIVFIDDILIYSKTEAKHEEHLPQVLETLRANKLYVKFSKCEFWLKKVTFLGHVVSSEGDSVDPAKIEAVTNWPRPSTVSEIRSFL

Query:  GLA
        GLA
Subjt:  GLA

SwissProt top hitse value%identityAlignment
P0CT34 Transposon Tf2-1 polyprotein3.4e-4734.04Show/hide
Query:  REPEVSLSSEPVVREYPDVFPD-ELPRLPPP-REIVFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLC
        +EPE+      + +E+ D+  +    +LP P + + F +EL      +    Y + P +++ +  ++ + L  G IR S +    PV+FV KK+G++R+ 
Subjt:  REPEVSLSSEPVVREYPDVFPD-ELPRLPPP-REIVFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLC

Query:  IDYRERNKVIIKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFRSRYGHYEFIIMSFDLTNAPAVFMDLMNRVFKDFLDSFVIVFI
        +DY+  NK +  N YPLP I+ L  ++QG+T+F+K+DL+S YH +R+R  D  K AFR   G +E+++M + ++ APA F   +N +  +  +S V+ ++
Subjt:  IDYRERNKVIIKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFRSRYGHYEFIIMSFDLTNAPAVFMDLMNRVFKDFLDSFVIVFI

Query:  DDILIYSKTEAKHEEHLPQVLETLRANKLYVKFSKCEFWLKKVTFLGHVVSSEGDSVDPAKIEAVTNWPRPSTVSEIRSFLG
        DDILI+SK+E++H +H+  VL+ L+   L +  +KCEF   +V F+G+ +S +G +     I+ V  W +P    E+R FLG
Subjt:  DDILIYSKTEAKHEEHLPQVLETLRANKLYVKFSKCEFWLKKVTFLGHVVSSEGDSVDPAKIEAVTNWPRPSTVSEIRSFLG

P0CT35 Transposon Tf2-2 polyprotein3.4e-4734.04Show/hide
Query:  REPEVSLSSEPVVREYPDVFPD-ELPRLPPP-REIVFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLC
        +EPE+      + +E+ D+  +    +LP P + + F +EL      +    Y + P +++ +  ++ + L  G IR S +    PV+FV KK+G++R+ 
Subjt:  REPEVSLSSEPVVREYPDVFPD-ELPRLPPP-REIVFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLC

Query:  IDYRERNKVIIKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFRSRYGHYEFIIMSFDLTNAPAVFMDLMNRVFKDFLDSFVIVFI
        +DY+  NK +  N YPLP I+ L  ++QG+T+F+K+DL+S YH +R+R  D  K AFR   G +E+++M + ++ APA F   +N +  +  +S V+ ++
Subjt:  IDYRERNKVIIKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFRSRYGHYEFIIMSFDLTNAPAVFMDLMNRVFKDFLDSFVIVFI

Query:  DDILIYSKTEAKHEEHLPQVLETLRANKLYVKFSKCEFWLKKVTFLGHVVSSEGDSVDPAKIEAVTNWPRPSTVSEIRSFLG
        DDILI+SK+E++H +H+  VL+ L+   L +  +KCEF   +V F+G+ +S +G +     I+ V  W +P    E+R FLG
Subjt:  DDILIYSKTEAKHEEHLPQVLETLRANKLYVKFSKCEFWLKKVTFLGHVVSSEGDSVDPAKIEAVTNWPRPSTVSEIRSFLG

P0CT41 Transposon Tf2-12 polyprotein3.4e-4734.04Show/hide
Query:  REPEVSLSSEPVVREYPDVFPD-ELPRLPPP-REIVFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLC
        +EPE+      + +E+ D+  +    +LP P + + F +EL      +    Y + P +++ +  ++ + L  G IR S +    PV+FV KK+G++R+ 
Subjt:  REPEVSLSSEPVVREYPDVFPD-ELPRLPPP-REIVFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLC

Query:  IDYRERNKVIIKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFRSRYGHYEFIIMSFDLTNAPAVFMDLMNRVFKDFLDSFVIVFI
        +DY+  NK +  N YPLP I+ L  ++QG+T+F+K+DL+S YH +R+R  D  K AFR   G +E+++M + ++ APA F   +N +  +  +S V+ ++
Subjt:  IDYRERNKVIIKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFRSRYGHYEFIIMSFDLTNAPAVFMDLMNRVFKDFLDSFVIVFI

Query:  DDILIYSKTEAKHEEHLPQVLETLRANKLYVKFSKCEFWLKKVTFLGHVVSSEGDSVDPAKIEAVTNWPRPSTVSEIRSFLG
        DDILI+SK+E++H +H+  VL+ L+   L +  +KCEF   +V F+G+ +S +G +     I+ V  W +P    E+R FLG
Subjt:  DDILIYSKTEAKHEEHLPQVLETLRANKLYVKFSKCEFWLKKVTFLGHVVSSEGDSVDPAKIEAVTNWPRPSTVSEIRSFLG

Q7LHG5 Transposon Ty3-I Gag-Pol polyprotein5.6e-5036.51Show/hide
Query:  KASKLLNQGTWGILASVVDTREPEVSLSSEP---------VVREYPDVFPDELPRLPPPREI-----VFAIELEPGTAPISRAPYRMAPAELKELKVQLQ
        +AS L   G +  + S + + EP  +  S           + ++Y ++  ++LP  P P +I        IE++PG       PY +     +E+   +Q
Subjt:  KASKLLNQGTWGILASVVDTREPEVSLSSEP---------VVREYPDVFPDELPRLPPPREI-----VFAIELEPGTAPISRAPYRMAPAELKELKVQLQ

Query:  ELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRERNKVIIKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFRSRYGHYEFII
        +LLD  FI PS SP  +PV+ V KKDG+ RLC+DYR  NK  I + +PLPRID+L  ++  A +F+ +DL SGYHQ+ +   D  KTAF +  G YE+ +
Subjt:  ELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRERNKVIIKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFRSRYGHYEFII

Query:  MSFDLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAKHEEHLPQVLETLRANKLYVKFSKCEFWLKKVTFLGHVVSSEGDSVDPAKIEAVTNW
        M F L NAP+ F   M   F+D    FV V++DDILI+S++  +H +HL  VLE L+   L VK  KC+F  ++  FLG+ +  +  +    K  A+ ++
Subjt:  MSFDLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAKHEEHLPQVLETLRANKLYVKFSKCEFWLKKVTFLGHVVSSEGDSVDPAKIEAVTNW

Query:  PRPSTVSEIRSFLGL
        P P TV + + FLG+
Subjt:  PRPSTVSEIRSFLGL

Q99315 Transposon Ty3-G Gag-Pol polyprotein5.6e-5036.51Show/hide
Query:  KASKLLNQGTWGILASVVDTREPEVSLSSEP---------VVREYPDVFPDELPRLPPPREI-----VFAIELEPGTAPISRAPYRMAPAELKELKVQLQ
        +AS L   G +  + S + + EP  +  S           + ++Y ++  ++LP  P P +I        IE++PG       PY +     +E+   +Q
Subjt:  KASKLLNQGTWGILASVVDTREPEVSLSSEP---------VVREYPDVFPDELPRLPPPREI-----VFAIELEPGTAPISRAPYRMAPAELKELKVQLQ

Query:  ELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRERNKVIIKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFRSRYGHYEFII
        +LLD  FI PS SP  +PV+ V KKDG+ RLC+DYR  NK  I + +PLPRID+L  ++  A +F+ +DL SGYHQ+ +   D  KTAF +  G YE+ +
Subjt:  ELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRERNKVIIKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFRSRYGHYEFII

Query:  MSFDLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAKHEEHLPQVLETLRANKLYVKFSKCEFWLKKVTFLGHVVSSEGDSVDPAKIEAVTNW
        M F L NAP+ F   M   F+D    FV V++DDILI+S++  +H +HL  VLE L+   L VK  KC+F  ++  FLG+ +  +  +    K  A+ ++
Subjt:  MSFDLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAKHEEHLPQVLETLRANKLYVKFSKCEFWLKKVTFLGHVVSSEGDSVDPAKIEAVTNW

Query:  PRPSTVSEIRSFLGL
        P P TV + + FLG+
Subjt:  PRPSTVSEIRSFLGL

Arabidopsis top hitse value%identityAlignment
ATMG00860.1 DNA/RNA polymerases superfamily protein1.8e-1142.86Show/hide
Query:  HLPQVLETLRANKLYVKFSKCEFWLKKVTFLG--HVVSSEGDSVDPAKIEAVTNWPRPSTVSEIRSFLGL
        HL  VL+    ++ Y    KC F   ++ +LG  H++S EG S DPAK+EA+  WP P   +E+R FLGL
Subjt:  HLPQVLETLRANKLYVKFSKCEFWLKKVTFLG--HVVSSEGDSVDPAKIEAVTNWPRPSTVSEIRSFLGL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGGCTAGTAAATTACTCAACCAGGGTACTTGGGGCATCTTGGCAAGCGTGGTAGATACCCGAGAACCAGAAGTTTCCCTATCTTCCGAACCAGTGGTAAGGGAGTA
CCCTGATGTCTTCCCCGATGAGCTTCCAAGACTTCCGCCTCCTAGGGAGATAGTCTTCGCCATTGAATTAGAACCAGGCACTGCTCCTATCTCGAGAGCCCCTTACAGAA
TGGCTCCAGCCGAGCTAAAAGAGCTTAAGGTCCAGTTGCAGGAGTTGCTGGACAAGGGTTTCATCCGGCCCAGTGTGTCACCTTGGGGGGCCCCAGTGTTGTTTGTGAAG
AAGAAGGATGGGTCGATGCGCCTTTGCATTGACTACAGAGAGCGGAACAAAGTGATAATTAAGAACCGCTACCCCTTGCCCAGGATTGATGACTTGTTCGATCAGTTGCA
GGGAGCCACTGTCTTTTCCAAGATCGACCTGCGATCAGGCTATCACCAGTTGAGGATTAGGGACAGTGACATTCCCAAGACGGCCTTTCGTTCGAGATACGGACATTACG
AGTTCATTATAATGTCTTTCGACTTGACTAATGCCCCTGCGGTGTTCATGGACTTGATGAACAGGGTGTTTAAGGACTTCCTAGACTCGTTCGTCATAGTCTTTATTGAT
GACATCTTGATTTACTCCAAAACTGAGGCTAAGCATGAGGAGCACTTGCCCCAGGTTTTGGAGACTCTTCGAGCCAACAAGCTGTATGTCAAGTTCTCCAAGTGTGAGTT
CTGGTTAAAGAAGGTGACGTTCCTCGGCCACGTGGTTTCCAGTGAGGGAGATTCTGTGGATCCAGCAAAGATCGAAGCGGTGACCAACTGGCCTCGACCGTCCACAGTTA
GTGAGATTCGAAGTTTTCTGGGCTTGGCAGTTACTACAGGAGGTTCGTGGAAGACTTCTCACGTATAG
mRNA sequenceShow/hide mRNA sequence
ATGAAGGCTAGTAAATTACTCAACCAGGGTACTTGGGGCATCTTGGCAAGCGTGGTAGATACCCGAGAACCAGAAGTTTCCCTATCTTCCGAACCAGTGGTAAGGGAGTA
CCCTGATGTCTTCCCCGATGAGCTTCCAAGACTTCCGCCTCCTAGGGAGATAGTCTTCGCCATTGAATTAGAACCAGGCACTGCTCCTATCTCGAGAGCCCCTTACAGAA
TGGCTCCAGCCGAGCTAAAAGAGCTTAAGGTCCAGTTGCAGGAGTTGCTGGACAAGGGTTTCATCCGGCCCAGTGTGTCACCTTGGGGGGCCCCAGTGTTGTTTGTGAAG
AAGAAGGATGGGTCGATGCGCCTTTGCATTGACTACAGAGAGCGGAACAAAGTGATAATTAAGAACCGCTACCCCTTGCCCAGGATTGATGACTTGTTCGATCAGTTGCA
GGGAGCCACTGTCTTTTCCAAGATCGACCTGCGATCAGGCTATCACCAGTTGAGGATTAGGGACAGTGACATTCCCAAGACGGCCTTTCGTTCGAGATACGGACATTACG
AGTTCATTATAATGTCTTTCGACTTGACTAATGCCCCTGCGGTGTTCATGGACTTGATGAACAGGGTGTTTAAGGACTTCCTAGACTCGTTCGTCATAGTCTTTATTGAT
GACATCTTGATTTACTCCAAAACTGAGGCTAAGCATGAGGAGCACTTGCCCCAGGTTTTGGAGACTCTTCGAGCCAACAAGCTGTATGTCAAGTTCTCCAAGTGTGAGTT
CTGGTTAAAGAAGGTGACGTTCCTCGGCCACGTGGTTTCCAGTGAGGGAGATTCTGTGGATCCAGCAAAGATCGAAGCGGTGACCAACTGGCCTCGACCGTCCACAGTTA
GTGAGATTCGAAGTTTTCTGGGCTTGGCAGTTACTACAGGAGGTTCGTGGAAGACTTCTCACGTATAG
Protein sequenceShow/hide protein sequence
MKASKLLNQGTWGILASVVDTREPEVSLSSEPVVREYPDVFPDELPRLPPPREIVFAIELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVK
KKDGSMRLCIDYRERNKVIIKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFRSRYGHYEFIIMSFDLTNAPAVFMDLMNRVFKDFLDSFVIVFID
DILIYSKTEAKHEEHLPQVLETLRANKLYVKFSKCEFWLKKVTFLGHVVSSEGDSVDPAKIEAVTNWPRPSTVSEIRSFLGLAVTTGGSWKTSHV