| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0032876.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 2.6e-65 | 89.13 | Show/hide |
Query: MDKCFLSVVPIQKGDKFNLMQCPKNELERNKMETIPYASIVGSLLYAHTCTRPDISFVVGMLGRYQSNIGMDHWKAAKKVLRYLQGTKDYMLTYKRSDHL
MDKC SVVPIQKGDKF+LMQCPKNELERN+METIPYASIVGSLL A TCTRPDISF VGMLGRYQSN GMDHWK AKKVLRYLQGTKDYMLTYKRSDHL
Subjt: MDKCFLSVVPIQKGDKFNLMQCPKNELERNKMETIPYASIVGSLLYAHTCTRPDISFVVGMLGRYQSNIGMDHWKAAKKVLRYLQGTKDYMLTYKRSDHL
Query: KVIGYSNSNFSGCVDKRKSTFGYLFLLAEGAISWKSAK
+VIGYS+S+F+GCVD RKSTFGYLFLLAEGAISWKS K
Subjt: KVIGYSNSNFSGCVDKRKSTFGYLFLLAEGAISWKSAK
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| KAA0033349.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 8.9e-66 | 91.24 | Show/hide |
Query: MDKCFLSVVPIQKGDKFNLMQCPKNELERNKMETIPYASIVGSLLYAHTCTRPDISFVVGMLGRYQSNIGMDHWKAAKKVLRYLQGTKDYMLTYKRSDHL
MDKC SVVPIQKGDKFNLMQCPKNELERN+METIPYASIVGSLLYA TCTRPDISF VGMLGRYQSN GMDHWKAAKKV RYLQGTKDYMLTYKRSDHL
Subjt: MDKCFLSVVPIQKGDKFNLMQCPKNELERNKMETIPYASIVGSLLYAHTCTRPDISFVVGMLGRYQSNIGMDHWKAAKKVLRYLQGTKDYMLTYKRSDHL
Query: KVIGYSNSNFSGCVDKRKSTFGYLFLLAEGAISWKSA
+VIGYS S+F GCVD RKSTFGYLFLLAEGAISWKSA
Subjt: KVIGYSNSNFSGCVDKRKSTFGYLFLLAEGAISWKSA
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| KAA0047404.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 2.2e-64 | 88.41 | Show/hide |
Query: MDKCFLSVVPIQKGDKFNLMQCPKNELERNKMETIPYASIVGSLLYAHTCTRPDISFVVGMLGRYQSNIGMDHWKAAKKVLRYLQGTKDYMLTYKRSDHL
MDKC SVVPIQKGDKF+LMQ PKNELERN+METIPYASIVGSLLYA TCTRPDISFV+GMLG YQSN GMDHWK AKKVLRYLQGTKDYMLTYKRSDHL
Subjt: MDKCFLSVVPIQKGDKFNLMQCPKNELERNKMETIPYASIVGSLLYAHTCTRPDISFVVGMLGRYQSNIGMDHWKAAKKVLRYLQGTKDYMLTYKRSDHL
Query: KVIGYSNSNFSGCVDKRKSTFGYLFLLAEGAISWKSAK
+VIGYS+ +F+GC+DKRKSTFGYLFLLAEGAISWKSAK
Subjt: KVIGYSNSNFSGCVDKRKSTFGYLFLLAEGAISWKSAK
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| KAA0052755.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 4.1e-63 | 87.68 | Show/hide |
Query: MDKCFLSVVPIQKGDKFNLMQCPKNELERNKMETIPYASIVGSLLYAHTCTRPDISFVVGMLGRYQSNIGMDHWKAAKKVLRYLQGTKDYMLTYKRSDHL
M+KC SVVPIQKGDKF+LMQCPKNELERN+METI YASIVGSLLYA TCTR DISF VGMLGRYQSN GMDHWKAAKKVLRYLQG KDYMLTYKRSDHL
Subjt: MDKCFLSVVPIQKGDKFNLMQCPKNELERNKMETIPYASIVGSLLYAHTCTRPDISFVVGMLGRYQSNIGMDHWKAAKKVLRYLQGTKDYMLTYKRSDHL
Query: KVIGYSNSNFSGCVDKRKSTFGYLFLLAEGAISWKSAK
+VI YS+S+F+GCVD RKSTFGYLFLLAEGAISWKSAK
Subjt: KVIGYSNSNFSGCVDKRKSTFGYLFLLAEGAISWKSAK
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| TYK04201.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 4.1e-63 | 87.68 | Show/hide |
Query: MDKCFLSVVPIQKGDKFNLMQCPKNELERNKMETIPYASIVGSLLYAHTCTRPDISFVVGMLGRYQSNIGMDHWKAAKKVLRYLQGTKDYMLTYKRSDHL
M+KC SVVPIQKGDKF+LMQCPKNELERN+METI YASIVGSLLYA TCTR DISF VGMLGRYQSN GMDHWKAAKKVLRYLQG KDYMLTYKRSDHL
Subjt: MDKCFLSVVPIQKGDKFNLMQCPKNELERNKMETIPYASIVGSLLYAHTCTRPDISFVVGMLGRYQSNIGMDHWKAAKKVLRYLQGTKDYMLTYKRSDHL
Query: KVIGYSNSNFSGCVDKRKSTFGYLFLLAEGAISWKSAK
+VI YS+S+F+GCVD RKSTFGYLFLLAEGAISWKSAK
Subjt: KVIGYSNSNFSGCVDKRKSTFGYLFLLAEGAISWKSAK
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7SS51 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.3e-65 | 89.13 | Show/hide |
Query: MDKCFLSVVPIQKGDKFNLMQCPKNELERNKMETIPYASIVGSLLYAHTCTRPDISFVVGMLGRYQSNIGMDHWKAAKKVLRYLQGTKDYMLTYKRSDHL
MDKC SVVPIQKGDKF+LMQCPKNELERN+METIPYASIVGSLL A TCTRPDISF VGMLGRYQSN GMDHWK AKKVLRYLQGTKDYMLTYKRSDHL
Subjt: MDKCFLSVVPIQKGDKFNLMQCPKNELERNKMETIPYASIVGSLLYAHTCTRPDISFVVGMLGRYQSNIGMDHWKAAKKVLRYLQGTKDYMLTYKRSDHL
Query: KVIGYSNSNFSGCVDKRKSTFGYLFLLAEGAISWKSAK
+VIGYS+S+F+GCVD RKSTFGYLFLLAEGAISWKS K
Subjt: KVIGYSNSNFSGCVDKRKSTFGYLFLLAEGAISWKSAK
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| A0A5A7SVZ5 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 4.3e-66 | 91.24 | Show/hide |
Query: MDKCFLSVVPIQKGDKFNLMQCPKNELERNKMETIPYASIVGSLLYAHTCTRPDISFVVGMLGRYQSNIGMDHWKAAKKVLRYLQGTKDYMLTYKRSDHL
MDKC SVVPIQKGDKFNLMQCPKNELERN+METIPYASIVGSLLYA TCTRPDISF VGMLGRYQSN GMDHWKAAKKV RYLQGTKDYMLTYKRSDHL
Subjt: MDKCFLSVVPIQKGDKFNLMQCPKNELERNKMETIPYASIVGSLLYAHTCTRPDISFVVGMLGRYQSNIGMDHWKAAKKVLRYLQGTKDYMLTYKRSDHL
Query: KVIGYSNSNFSGCVDKRKSTFGYLFLLAEGAISWKSA
+VIGYS S+F GCVD RKSTFGYLFLLAEGAISWKSA
Subjt: KVIGYSNSNFSGCVDKRKSTFGYLFLLAEGAISWKSA
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| A0A5A7UG95 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 2.0e-63 | 87.68 | Show/hide |
Query: MDKCFLSVVPIQKGDKFNLMQCPKNELERNKMETIPYASIVGSLLYAHTCTRPDISFVVGMLGRYQSNIGMDHWKAAKKVLRYLQGTKDYMLTYKRSDHL
M+KC SVVPIQKGDKF+LMQCPKNELERN+METI YASIVGSLLYA TCTR DISF VGMLGRYQSN GMDHWKAAKKVLRYLQG KDYMLTYKRSDHL
Subjt: MDKCFLSVVPIQKGDKFNLMQCPKNELERNKMETIPYASIVGSLLYAHTCTRPDISFVVGMLGRYQSNIGMDHWKAAKKVLRYLQGTKDYMLTYKRSDHL
Query: KVIGYSNSNFSGCVDKRKSTFGYLFLLAEGAISWKSAK
+VI YS+S+F+GCVD RKSTFGYLFLLAEGAISWKSAK
Subjt: KVIGYSNSNFSGCVDKRKSTFGYLFLLAEGAISWKSAK
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| A0A5D3BWW5 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 2.0e-63 | 87.68 | Show/hide |
Query: MDKCFLSVVPIQKGDKFNLMQCPKNELERNKMETIPYASIVGSLLYAHTCTRPDISFVVGMLGRYQSNIGMDHWKAAKKVLRYLQGTKDYMLTYKRSDHL
M+KC SVVPIQKGDKF+LMQCPKNELERN+METI YASIVGSLLYA TCTR DISF VGMLGRYQSN GMDHWKAAKKVLRYLQG KDYMLTYKRSDHL
Subjt: MDKCFLSVVPIQKGDKFNLMQCPKNELERNKMETIPYASIVGSLLYAHTCTRPDISFVVGMLGRYQSNIGMDHWKAAKKVLRYLQGTKDYMLTYKRSDHL
Query: KVIGYSNSNFSGCVDKRKSTFGYLFLLAEGAISWKSAK
+VI YS+S+F+GCVD RKSTFGYLFLLAEGAISWKSAK
Subjt: KVIGYSNSNFSGCVDKRKSTFGYLFLLAEGAISWKSAK
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| A0A5D3CRQ3 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.1e-64 | 88.41 | Show/hide |
Query: MDKCFLSVVPIQKGDKFNLMQCPKNELERNKMETIPYASIVGSLLYAHTCTRPDISFVVGMLGRYQSNIGMDHWKAAKKVLRYLQGTKDYMLTYKRSDHL
MDKC SVVPIQKGDKF+LMQ PKNELERN+METIPYASIVGSLLYA TCTRPDISFV+GMLG YQSN GMDHWK AKKVLRYLQGTKDYMLTYKRSDHL
Subjt: MDKCFLSVVPIQKGDKFNLMQCPKNELERNKMETIPYASIVGSLLYAHTCTRPDISFVVGMLGRYQSNIGMDHWKAAKKVLRYLQGTKDYMLTYKRSDHL
Query: KVIGYSNSNFSGCVDKRKSTFGYLFLLAEGAISWKSAK
+VIGYS+ +F+GC+DKRKSTFGYLFLLAEGAISWKSAK
Subjt: KVIGYSNSNFSGCVDKRKSTFGYLFLLAEGAISWKSAK
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 1.5e-15 | 40.57 | Show/hide |
Query: PYASIVGSLLYAHTCTRPDISFVVGMLGRYQSNIGMDHWKAAKKVLRYLQGTKDYMLTYKR--SDHLKVIGYSNSNFSGCVDKRKSTFGYLFLLAE-GAI
P S++G L+Y CTRPD++ V +L RY S + W+ K+VLRYL+GT D L +K+ + K+IGY +S+++G RKST GYLF + + I
Subjt: PYASIVGSLLYAHTCTRPDISFVVGMLGRYQSNIGMDHWKAAKKVLRYLQGTKDYMLTYKR--SDHLKVIGYSNSNFSGCVDKRKSTFGYLFLLAE-GAI
Query: SWKSAK
W + +
Subjt: SWKSAK
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| P0CV72 Secreted RxLR effector protein 161 | 4.3e-23 | 44.86 | Show/hide |
Query: METIPYASIVGSLLYAHTCTRPDISFVVGMLGRYQSNIGMDHWKAAKKVLRYLQGTKDYMLTYKRSDHLKVIGYSNSNFSGCVDKRKSTFGYLFLLAEGA
M+ +PY S VG+++Y TRPD++ VG+L ++ S+ HW+A K+VLRYLQ T+ Y L + R+ K++GYS+++++G V+ R+ST GYLF L G
Subjt: METIPYASIVGSLLYAHTCTRPDISFVVGMLGRYQSNIGMDHWKAAKKVLRYLQGTKDYMLTYKRSDHLKVIGYSNSNFSGCVDKRKSTFGYLFLLAEGA
Query: ISWKSAK
+SW+S K
Subjt: ISWKSAK
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 7.2e-26 | 45.45 | Show/hide |
Query: KFNLMQCPKNELERNKMETIPYASIVGSLLYAHTCTRPDISFVVGMLGRYQSNIGMDHWKAAKKVLRYLQGTKDYMLTYKRSDHLKVIGYSNSNFSGCVD
K + CP E+ M +PY+S VGSL+YA CTRPDI+ VG++ R+ N G +HW+A K +LRYL+GT L + SD + + GY++++ +G +D
Subjt: KFNLMQCPKNELERNKMETIPYASIVGSLLYAHTCTRPDISFVVGMLGRYQSNIGMDHWKAAKKVLRYLQGTKDYMLTYKRSDHLKVIGYSNSNFSGCVD
Query: KRKSTFGYLFLLAEGAISWKS
RKS+ GYLF + GAISW+S
Subjt: KRKSTFGYLFLLAEGAISWKS
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 6.9e-13 | 38.14 | Show/hide |
Query: PKNELERNKMETIP--YASIVGSLLYAHTCTRPDISFVVGMLGRYQSNIGMDHWKAAKKVLRYLQGTKDYMLTYKRSDHLKVIGYSNSNFSGCVDKRKST
PK L T P Y IVGSL Y TRPDIS+ V L ++ +H +A K++LRYL GT ++ + K+ + L + YS+++++G D ST
Subjt: PKNELERNKMETIP--YASIVGSLLYAHTCTRPDISFVVGMLGRYQSNIGMDHWKAAKKVLRYLQGTKDYMLTYKRSDHLKVIGYSNSNFSGCVDKRKST
Query: FGYLFLLAEGAISWKSAK
GY+ L ISW S K
Subjt: FGYLFLLAEGAISWKSAK
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 1.5e-15 | 43.14 | Show/hide |
Query: YASIVGSLLYAHTCTRPDISFVVGMLGRYQSNIGMDHWKAAKKVLRYLQGTKDYMLTYKRSDHLKVIGYSNSNFSGCVDKRKSTFGYLFLLAEGAISWKS
Y IVGSL Y TRPD+S+ V L +Y DHW A K+VLRYL GT D+ + K+ + L + YS+++++G D ST GY+ L ISW S
Subjt: YASIVGSLLYAHTCTRPDISFVVGMLGRYQSNIGMDHWKAAKKVLRYLQGTKDYMLTYKRSDHLKVIGYSNSNFSGCVDKRKSTFGYLFLLAEGAISWKS
Query: AK
K
Subjt: AK
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