| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0025945.1 gag/pol protein [Cucumis melo var. makuwa] | 8.2e-77 | 84.88 | Show/hide |
Query: MSRCSGRVVSQPNHYLGLTETHVVIPNVGVEDLLSYTQTTGDVDKNQWVKVMDLEMEFMYFNSVWELVDLPEGEKPLGCKWIYKRNRDSAWKVQTFKARL
M R SGRVVSQPN YLGLTET VVIP+ GVED LSY Q DVDK+QWVK MDLEME MYFNSVWELVDLPEG KP+GCKWIYKR RDSA KVQTFKARL
Subjt: MSRCSGRVVSQPNHYLGLTETHVVIPNVGVEDLLSYTQTTGDVDKNQWVKVMDLEMEFMYFNSVWELVDLPEGEKPLGCKWIYKRNRDSAWKVQTFKARL
Query: VAKGYTQQEGVDYEETFSPIAMLKSIRILLSIAIFYDYEIWKMDVKIAFLNGNLEESIFMSQPEGIITQCKE
VAKGYTQ+EGVDYEETFSP+AMLKSIRILLSIA FYDYEIW+MDVK AFLNGNLEESIFMSQPEG ITQ +E
Subjt: VAKGYTQQEGVDYEETFSPIAMLKSIRILLSIAIFYDYEIWKMDVKIAFLNGNLEESIFMSQPEGIITQCKE
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| KAA0059226.1 gag/pol protein [Cucumis melo var. makuwa] | 8.2e-77 | 84.88 | Show/hide |
Query: MSRCSGRVVSQPNHYLGLTETHVVIPNVGVEDLLSYTQTTGDVDKNQWVKVMDLEMEFMYFNSVWELVDLPEGEKPLGCKWIYKRNRDSAWKVQTFKARL
M R SGRVVSQPN YLGLTET VVIP+ GVED LSY Q DVDK+QWVK MDLEME MYFNSVWELVDLPEG KP+GCKWIYKR RDSA KVQTFKARL
Subjt: MSRCSGRVVSQPNHYLGLTETHVVIPNVGVEDLLSYTQTTGDVDKNQWVKVMDLEMEFMYFNSVWELVDLPEGEKPLGCKWIYKRNRDSAWKVQTFKARL
Query: VAKGYTQQEGVDYEETFSPIAMLKSIRILLSIAIFYDYEIWKMDVKIAFLNGNLEESIFMSQPEGIITQCKE
VAKGYTQ+EGVDYEETFSP+AMLKSIRILLSIA FYDYEIW+MDVK AFLNGNLEESIFMSQPEG ITQ +E
Subjt: VAKGYTQQEGVDYEETFSPIAMLKSIRILLSIAIFYDYEIWKMDVKIAFLNGNLEESIFMSQPEGIITQCKE
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| KAA0067545.1 gag/pol protein [Cucumis melo var. makuwa] | 3.0e-95 | 100 | Show/hide |
Query: MSRCSGRVVSQPNHYLGLTETHVVIPNVGVEDLLSYTQTTGDVDKNQWVKVMDLEMEFMYFNSVWELVDLPEGEKPLGCKWIYKRNRDSAWKVQTFKARL
MSRCSGRVVSQPNHYLGLTETHVVIPNVGVEDLLSYTQTTGDVDKNQWVKVMDLEMEFMYFNSVWELVDLPEGEKPLGCKWIYKRNRDSAWKVQTFKARL
Subjt: MSRCSGRVVSQPNHYLGLTETHVVIPNVGVEDLLSYTQTTGDVDKNQWVKVMDLEMEFMYFNSVWELVDLPEGEKPLGCKWIYKRNRDSAWKVQTFKARL
Query: VAKGYTQQEGVDYEETFSPIAMLKSIRILLSIAIFYDYEIWKMDVKIAFLNGNLEESIFMSQPEGIITQCKE
VAKGYTQQEGVDYEETFSPIAMLKSIRILLSIAIFYDYEIWKMDVKIAFLNGNLEESIFMSQPEGIITQCKE
Subjt: VAKGYTQQEGVDYEETFSPIAMLKSIRILLSIAIFYDYEIWKMDVKIAFLNGNLEESIFMSQPEGIITQCKE
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| TYK02840.1 gag/pol protein [Cucumis melo var. makuwa] | 6.9e-76 | 84.3 | Show/hide |
Query: MSRCSGRVVSQPNHYLGLTETHVVIPNVGVEDLLSYTQTTGDVDKNQWVKVMDLEMEFMYFNSVWELVDLPEGEKPLGCKWIYKRNRDSAWKVQTFKARL
M R SGRVVSQPN YLGLTET VVIP+ GVED LSY Q DVDK+QWVK MDLEME MYFNSVWELVDLPEG KP+GCKWIYKR RDSA KVQTFKARL
Subjt: MSRCSGRVVSQPNHYLGLTETHVVIPNVGVEDLLSYTQTTGDVDKNQWVKVMDLEMEFMYFNSVWELVDLPEGEKPLGCKWIYKRNRDSAWKVQTFKARL
Query: VAKGYTQQEGVDYEETFSPIAMLKSIRILLSIAIFYDYEIWKMDVKIAFLNGNLEESIFMSQPEGIITQCKE
VAKGYTQ+EGVDYEETFSP+AMLKSIRILLSIA FYDYEIW+MDVK AFLNGNLEESIFMSQPE ITQ +E
Subjt: VAKGYTQQEGVDYEETFSPIAMLKSIRILLSIAIFYDYEIWKMDVKIAFLNGNLEESIFMSQPEGIITQCKE
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| TYK15984.1 gag/pol protein [Cucumis melo var. makuwa] | 8.2e-77 | 84.88 | Show/hide |
Query: MSRCSGRVVSQPNHYLGLTETHVVIPNVGVEDLLSYTQTTGDVDKNQWVKVMDLEMEFMYFNSVWELVDLPEGEKPLGCKWIYKRNRDSAWKVQTFKARL
M R SGRVVSQPN YLGLTET VVIP+ GVED LSY Q DVDK+QWVK MDLEME MYFNSVWELVDLPEG KP+GCKWIYKR RDSA KVQTFKARL
Subjt: MSRCSGRVVSQPNHYLGLTETHVVIPNVGVEDLLSYTQTTGDVDKNQWVKVMDLEMEFMYFNSVWELVDLPEGEKPLGCKWIYKRNRDSAWKVQTFKARL
Query: VAKGYTQQEGVDYEETFSPIAMLKSIRILLSIAIFYDYEIWKMDVKIAFLNGNLEESIFMSQPEGIITQCKE
VAKGYTQ+EGVDYEETFSP+AMLKSIRILLSIA FYDYEIW+MDVK AFLNGNLEESIFMSQPEG ITQ +E
Subjt: VAKGYTQQEGVDYEETFSPIAMLKSIRILLSIAIFYDYEIWKMDVKIAFLNGNLEESIFMSQPEGIITQCKE
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7TZD0 Gag/pol protein | 4.0e-77 | 84.88 | Show/hide |
Query: MSRCSGRVVSQPNHYLGLTETHVVIPNVGVEDLLSYTQTTGDVDKNQWVKVMDLEMEFMYFNSVWELVDLPEGEKPLGCKWIYKRNRDSAWKVQTFKARL
M R SGRVVSQPN YLGLTET VVIP+ GVED LSY Q DVDK+QWVK MDLEME MYFNSVWELVDLPEG KP+GCKWIYKR RDSA KVQTFKARL
Subjt: MSRCSGRVVSQPNHYLGLTETHVVIPNVGVEDLLSYTQTTGDVDKNQWVKVMDLEMEFMYFNSVWELVDLPEGEKPLGCKWIYKRNRDSAWKVQTFKARL
Query: VAKGYTQQEGVDYEETFSPIAMLKSIRILLSIAIFYDYEIWKMDVKIAFLNGNLEESIFMSQPEGIITQCKE
VAKGYTQ+EGVDYEETFSP+AMLKSIRILLSIA FYDYEIW+MDVK AFLNGNLEESIFMSQPEG ITQ +E
Subjt: VAKGYTQQEGVDYEETFSPIAMLKSIRILLSIAIFYDYEIWKMDVKIAFLNGNLEESIFMSQPEGIITQCKE
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| A0A5A7UYE8 Gag/pol protein | 4.0e-77 | 84.88 | Show/hide |
Query: MSRCSGRVVSQPNHYLGLTETHVVIPNVGVEDLLSYTQTTGDVDKNQWVKVMDLEMEFMYFNSVWELVDLPEGEKPLGCKWIYKRNRDSAWKVQTFKARL
M R SGRVVSQPN YLGLTET VVIP+ GVED LSY Q DVDK+QWVK MDLEME MYFNSVWELVDLPEG KP+GCKWIYKR RDSA KVQTFKARL
Subjt: MSRCSGRVVSQPNHYLGLTETHVVIPNVGVEDLLSYTQTTGDVDKNQWVKVMDLEMEFMYFNSVWELVDLPEGEKPLGCKWIYKRNRDSAWKVQTFKARL
Query: VAKGYTQQEGVDYEETFSPIAMLKSIRILLSIAIFYDYEIWKMDVKIAFLNGNLEESIFMSQPEGIITQCKE
VAKGYTQ+EGVDYEETFSP+AMLKSIRILLSIA FYDYEIW+MDVK AFLNGNLEESIFMSQPEG ITQ +E
Subjt: VAKGYTQQEGVDYEETFSPIAMLKSIRILLSIAIFYDYEIWKMDVKIAFLNGNLEESIFMSQPEGIITQCKE
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| A0A5D3BDY8 Gag/pol protein | 1.4e-95 | 100 | Show/hide |
Query: MSRCSGRVVSQPNHYLGLTETHVVIPNVGVEDLLSYTQTTGDVDKNQWVKVMDLEMEFMYFNSVWELVDLPEGEKPLGCKWIYKRNRDSAWKVQTFKARL
MSRCSGRVVSQPNHYLGLTETHVVIPNVGVEDLLSYTQTTGDVDKNQWVKVMDLEMEFMYFNSVWELVDLPEGEKPLGCKWIYKRNRDSAWKVQTFKARL
Subjt: MSRCSGRVVSQPNHYLGLTETHVVIPNVGVEDLLSYTQTTGDVDKNQWVKVMDLEMEFMYFNSVWELVDLPEGEKPLGCKWIYKRNRDSAWKVQTFKARL
Query: VAKGYTQQEGVDYEETFSPIAMLKSIRILLSIAIFYDYEIWKMDVKIAFLNGNLEESIFMSQPEGIITQCKE
VAKGYTQQEGVDYEETFSPIAMLKSIRILLSIAIFYDYEIWKMDVKIAFLNGNLEESIFMSQPEGIITQCKE
Subjt: VAKGYTQQEGVDYEETFSPIAMLKSIRILLSIAIFYDYEIWKMDVKIAFLNGNLEESIFMSQPEGIITQCKE
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| A0A5D3BUN8 Gag/pol protein | 3.4e-76 | 84.3 | Show/hide |
Query: MSRCSGRVVSQPNHYLGLTETHVVIPNVGVEDLLSYTQTTGDVDKNQWVKVMDLEMEFMYFNSVWELVDLPEGEKPLGCKWIYKRNRDSAWKVQTFKARL
M R SGRVVSQPN YLGLTET VVIP+ GVED LSY Q DVDK+QWVK MDLEME MYFNSVWELVDLPEG KP+GCKWIYKR RDSA KVQTFKARL
Subjt: MSRCSGRVVSQPNHYLGLTETHVVIPNVGVEDLLSYTQTTGDVDKNQWVKVMDLEMEFMYFNSVWELVDLPEGEKPLGCKWIYKRNRDSAWKVQTFKARL
Query: VAKGYTQQEGVDYEETFSPIAMLKSIRILLSIAIFYDYEIWKMDVKIAFLNGNLEESIFMSQPEGIITQCKE
VAKGYTQ+EGVDYEETFSP+AMLKSIRILLSIA FYDYEIW+MDVK AFLNGNLEESIFMSQPE ITQ +E
Subjt: VAKGYTQQEGVDYEETFSPIAMLKSIRILLSIAIFYDYEIWKMDVKIAFLNGNLEESIFMSQPEGIITQCKE
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| A0A5D3CYF4 Gag/pol protein | 4.0e-77 | 84.88 | Show/hide |
Query: MSRCSGRVVSQPNHYLGLTETHVVIPNVGVEDLLSYTQTTGDVDKNQWVKVMDLEMEFMYFNSVWELVDLPEGEKPLGCKWIYKRNRDSAWKVQTFKARL
M R SGRVVSQPN YLGLTET VVIP+ GVED LSY Q DVDK+QWVK MDLEME MYFNSVWELVDLPEG KP+GCKWIYKR RDSA KVQTFKARL
Subjt: MSRCSGRVVSQPNHYLGLTETHVVIPNVGVEDLLSYTQTTGDVDKNQWVKVMDLEMEFMYFNSVWELVDLPEGEKPLGCKWIYKRNRDSAWKVQTFKARL
Query: VAKGYTQQEGVDYEETFSPIAMLKSIRILLSIAIFYDYEIWKMDVKIAFLNGNLEESIFMSQPEGIITQCKE
VAKGYTQ+EGVDYEETFSP+AMLKSIRILLSIA FYDYEIW+MDVK AFLNGNLEESIFMSQPEG ITQ +E
Subjt: VAKGYTQQEGVDYEETFSPIAMLKSIRILLSIAIFYDYEIWKMDVKIAFLNGNLEESIFMSQPEGIITQCKE
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 1.9e-23 | 39.02 | Show/hide |
Query: DKNQWVKVMDLEMEFMYFNSVWELVDLPEGEKPLGCKWIYKRNRDSAWKVQTFKARLVAKGYTQQEGVDYEETFSPIAMLKSIRILLSIAIFYDYEIWKM
DK+ W + ++ E+ N+ W + PE + + +W++ + +KARLVA+G+TQ+ +DYEETF+P+A + S R +LS+ I Y+ ++ +M
Subjt: DKNQWVKVMDLEMEFMYFNSVWELVDLPEGEKPLGCKWIYKRNRDSAWKVQTFKARLVAKGYTQQEGVDYEETFSPIAMLKSIRILLSIAIFYDYEIWKM
Query: DVKIAFLNGNLEESIFMSQPEGI
DVK AFLNG L+E I+M P+GI
Subjt: DVKIAFLNGNLEESIFMSQPEGI
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 4.1e-31 | 49.18 | Show/hide |
Query: DKNQWVKVMDLEMEFMYFNSVWELVDLPEGEKPLGCKWIYKRNRDSAWKVQTFKARLVAKGYTQQEGVDYEETFSPIAMLKSIRILLSIAIFYDYEIWKM
+KNQ +K M EME + N ++LV+LP+G++PL CKW++K +D K+ +KARLV KG+ Q++G+D++E FSP+ + SIR +LS+A D E+ ++
Subjt: DKNQWVKVMDLEMEFMYFNSVWELVDLPEGEKPLGCKWIYKRNRDSAWKVQTFKARLVAKGYTQQEGVDYEETFSPIAMLKSIRILLSIAIFYDYEIWKM
Query: DVKIAFLNGNLEESIFMSQPEG
DVK AFL+G+LEE I+M QPEG
Subjt: DVKIAFLNGNLEESIFMSQPEG
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| P92520 Uncharacterized mitochondrial protein AtMg00820 | 2.3e-13 | 39.53 | Show/hide |
Query: WVKVMDLEMEFMYFNSVWELVDLPEGEKPLGCKWIYKRNRDSAWKVQTFKARLVAKGYTQQEGVDYEETFSPIAMLKSIRILLSIA
W + M E++ + N W LV P + LGCKW++K S + KARLVAKG+ Q+EG+ + ET+SP+ +IR +L++A
Subjt: WVKVMDLEMEFMYFNSVWELVDLPEGEKPLGCKWIYKRNRDSAWKVQTFKARLVAKGYTQQEGVDYEETFSPIAMLKSIRILLSIA
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 6.0e-22 | 41.8 | Show/hide |
Query: QWVKVMDLEMEFMYFNSVWELVDLPEGEKPL-GCKWIYKRNRDSAWKVQTFKARLVAKGYTQQEGVDYEETFSPIAMLKSIRILLSIAIFYDYEIWKMDV
+W M E+ N W+LV P + GC+WI+ + +S + +KARLVAKGY Q+ G+DY ETFSP+ SIRI+L +A+ + I ++DV
Subjt: QWVKVMDLEMEFMYFNSVWELVDLPEGEKPL-GCKWIYKRNRDSAWKVQTFKARLVAKGYTQQEGVDYEETFSPIAMLKSIRILLSIAIFYDYEIWKMDV
Query: KIAFLNGNLEESIFMSQPEGII
AFL G L + ++MSQP G I
Subjt: KIAFLNGNLEESIFMSQPEGII
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 1.0e-21 | 40.65 | Show/hide |
Query: NQWVKVMDLEMEFMYFNSVWELVDLPEGEKPL-GCKWIYKRNRDSAWKVQTFKARLVAKGYTQQEGVDYEETFSPIAMLKSIRILLSIAIFYDYEIWKMD
++W + M E+ N W+LV P + GC+WI+ + +S + +KARLVAKGY Q+ G+DY ETFSP+ SIRI+L +A+ + I ++D
Subjt: NQWVKVMDLEMEFMYFNSVWELVDLPEGEKPL-GCKWIYKRNRDSAWKVQTFKARLVAKGYTQQEGVDYEETFSPIAMLKSIRILLSIAIFYDYEIWKMD
Query: VKIAFLNGNLEESIFMSQPEGII
V AFL G L + ++MSQP G +
Subjt: VKIAFLNGNLEESIFMSQPEGII
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