| GenBank top hits | e value | %identity | Alignment |
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| KAA0025945.1 gag/pol protein [Cucumis melo var. makuwa] | 4.5e-115 | 92.51 | Show/hide |
Query: MFLENLYIVPKIKRNLVFVSCLIEHMYSINFSMNEAFISKNGVHICSAKLENNLYVLRPNEAKAVLNHEMFRTTNTKNKRQRISLNNNTYLWHLKLGHIN
MFLENLYIVPKIKRNLV VSCLIEHMYSINFSMNEAFI KNGVHICSAKLENNLYVLRPNEAKAVLNHEMFRT NT+NKRQRIS NNNTYLWHL+LGHIN
Subjt: MFLENLYIVPKIKRNLVFVSCLIEHMYSINFSMNEAFISKNGVHICSAKLENNLYVLRPNEAKAVLNHEMFRTTNTKNKRQRISLNNNTYLWHLKLGHIN
Query: LDWIERLVKNGLLNELEDDSLPPCESCLEGKMTNRPFTGKGYRAKEPLELIHSDLCGPMNVKAREGFEYFISFIDDYSRYSYLYLMEHKSEALEKFKEYK
LD I RLVKNGLLN+L+D SLPPCESCLEGKMT RPFTGKGYRAKEPLELIHSDLCGPMNVKAR GFEYFISFIDDYSRY YLYLMEHKSEALEKFKEYK
Subjt: LDWIERLVKNGLLNELEDDSLPPCESCLEGKMTNRPFTGKGYRAKEPLELIHSDLCGPMNVKAREGFEYFISFIDDYSRYSYLYLMEHKSEALEKFKEYK
Query: TKVENLLCKKVKILRSDRGGEYMDLRF
T+VENLL KK+KILRSDRGGEYMDLRF
Subjt: TKVENLLCKKVKILRSDRGGEYMDLRF
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| KAA0035907.1 gag/pol protein [Cucumis melo var. makuwa] | 2.1e-112 | 90.75 | Show/hide |
Query: MFLENLYIVPKIKRNLVFVSCLIEHMYSINFSMNEAFISKNGVHICSAKLENNLYVLRPNEAKAVLNHEMFRTTNTKNKRQRISLNNNTYLWHLKLGHIN
MFLENLYIVPKIKRNLV VSCLIEHMYSINFSMNEAFI KNGVHICSAKLENNLYVLRPNEAKAVLNHEMFRT NT+NKRQRIS NNNTYLWHL+LGHIN
Subjt: MFLENLYIVPKIKRNLVFVSCLIEHMYSINFSMNEAFISKNGVHICSAKLENNLYVLRPNEAKAVLNHEMFRTTNTKNKRQRISLNNNTYLWHLKLGHIN
Query: LDWIERLVKNGLLNELEDDSLPPCESCLEGKMTNRPFTGKGYRAKEPLELIHSDLCGPMNVKAREGFEYFISFIDDYSRYSYLYLMEHKSEALEKFKEYK
LD I RLVK+GLLN+L+D SLPPCESCLEGKMT RPFTGKGYRAKEPLELIHSDLCGPMNVKAR FEYFISFIDDYSRY YLYLMEHKSEALEKFKEYK
Subjt: LDWIERLVKNGLLNELEDDSLPPCESCLEGKMTNRPFTGKGYRAKEPLELIHSDLCGPMNVKAREGFEYFISFIDDYSRYSYLYLMEHKSEALEKFKEYK
Query: TKVENLLCKKVKILRSDRGGEYMDLRF
T+VENLL KK+KI RSDRGGEYMDL F
Subjt: TKVENLLCKKVKILRSDRGGEYMDLRF
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| KAA0046415.1 gag/pol protein [Cucumis melo var. makuwa] | 5.9e-91 | 72.69 | Show/hide |
Query: MFLENLYIVPKIKRNLVFVSCLIEHMYSINFSMNEAFISKNGVHICSAKLENNLYVLRPNEAKAVLNHEMFRTTNTKNKRQRISLNNNTYLWHLKLGHIN
+ LEN+Y+VP +KRNL+ V CL+E YS+ F++N+ FI KNGV ICSAKLENNLYVLR +KA+LN EMF+T T+NKR +IS N +LWHL+LGHIN
Subjt: MFLENLYIVPKIKRNLVFVSCLIEHMYSINFSMNEAFISKNGVHICSAKLENNLYVLRPNEAKAVLNHEMFRTTNTKNKRQRISLNNNTYLWHLKLGHIN
Query: LDWIERLVKNGLLNELEDDSLPPCESCLEGKMTNRPFTGKGYRAKEPLELIHSDLCGPMNVKAREGFEYFISFIDDYSRYSYLYLMEHKSEALEKFKEYK
L+ IERLVKNGLL+ELE++SLP CESCLEGKMT RPFTGKG+RAKEPLEL+HSDLCGPMNVKAR GFEYFI+F DDYSRY Y+YLM+HKSEALEKFKEYK
Subjt: LDWIERLVKNGLLNELEDDSLPPCESCLEGKMTNRPFTGKGYRAKEPLELIHSDLCGPMNVKAREGFEYFISFIDDYSRYSYLYLMEHKSEALEKFKEYK
Query: TKVENLLCKKVKILRSDRGGEYMDLRF
+VEN L K +K RSDRGGEYMDL+F
Subjt: TKVENLLCKKVKILRSDRGGEYMDLRF
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| KAA0060534.1 gag/pol protein [Cucumis melo var. makuwa] | 7.2e-113 | 90.31 | Show/hide |
Query: MFLENLYIVPKIKRNLVFVSCLIEHMYSINFSMNEAFISKNGVHICSAKLENNLYVLRPNEAKAVLNHEMFRTTNTKNKRQRISLNNNTYLWHLKLGHIN
MFLENLYIVPKIKRNLV VSCLIEHMYSI+FSMNEAFISKNGVHICS KLE+NLYVL+PNE KAVLNHEMFRT NT+NKRQRIS NNNTYLWHL+LGHIN
Subjt: MFLENLYIVPKIKRNLVFVSCLIEHMYSINFSMNEAFISKNGVHICSAKLENNLYVLRPNEAKAVLNHEMFRTTNTKNKRQRISLNNNTYLWHLKLGHIN
Query: LDWIERLVKNGLLNELEDDSLPPCESCLEGKMTNRPFTGKGYRAKEPLELIHSDLCGPMNVKAREGFEYFISFIDDYSRYSYLYLMEHKSEALEKFKEYK
LD I RLVKNGLLN+LEDDSLPPCESCLEGKMT RPFTGKGYRAKEPLELIHSDLCGPMNVKA GFEYFISFIDDYS Y YLYL+EHKSEALEKFKEYK
Subjt: LDWIERLVKNGLLNELEDDSLPPCESCLEGKMTNRPFTGKGYRAKEPLELIHSDLCGPMNVKAREGFEYFISFIDDYSRYSYLYLMEHKSEALEKFKEYK
Query: TKVENLLCKKVKILRSDRGGEYMDLRF
T+VENLL KK+KILRSDRGGEYMDLRF
Subjt: TKVENLLCKKVKILRSDRGGEYMDLRF
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| KAA0067938.1 gag/pol protein [Cucumis melo var. makuwa] | 1.3e-109 | 89.87 | Show/hide |
Query: MFLENLYIVPKIKRNLVFVSCLIEHMYSINFSMNEAFISKNGVHICSAKLENNLYVLRPNEAKAVLNHEMFRTTNTKNKRQRISLNNNTYLWHLKLGHIN
MFLENLYIVPKIKRNLVFVSCLIEHMYSINFSMNEAFISKNG AKLE+NLYVLRPNEAKAVLNHEMFRT NT+NKRQRIS NNNTYLWHL+L HIN
Subjt: MFLENLYIVPKIKRNLVFVSCLIEHMYSINFSMNEAFISKNGVHICSAKLENNLYVLRPNEAKAVLNHEMFRTTNTKNKRQRISLNNNTYLWHLKLGHIN
Query: LDWIERLVKNGLLNELEDDSLPPCESCLEGKMTNRPFTGKGYRAKEPLELIHSDLCGPMNVKAREGFEYFISFIDDYSRYSYLYLMEHKSEALEKFKEYK
LD I RLVKNGLLN+L+DDSLPPCESCLEGKMT RPFTGK YRAKEPLELIHSDLCGPMNVKAR GFEYFISFIDDYSRY YLYLMEHK EALEKFKEYK
Subjt: LDWIERLVKNGLLNELEDDSLPPCESCLEGKMTNRPFTGKGYRAKEPLELIHSDLCGPMNVKAREGFEYFISFIDDYSRYSYLYLMEHKSEALEKFKEYK
Query: TKVENLLCKKVKILRSDRGGEYMDLRF
T+VENLL KK+KILRSDRGGEYMDLRF
Subjt: TKVENLLCKKVKILRSDRGGEYMDLRF
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7SMH8 Gag/pol protein | 2.9e-91 | 72.69 | Show/hide |
Query: MFLENLYIVPKIKRNLVFVSCLIEHMYSINFSMNEAFISKNGVHICSAKLENNLYVLRPNEAKAVLNHEMFRTTNTKNKRQRISLNNNTYLWHLKLGHIN
+ LEN+Y+VP +KRNL+ V CL+E YS+ F++N+ FI KNGV ICSAKLENNLYVLR +KA+LN EMF+T T+NKR +IS N +LWHL+LGHIN
Subjt: MFLENLYIVPKIKRNLVFVSCLIEHMYSINFSMNEAFISKNGVHICSAKLENNLYVLRPNEAKAVLNHEMFRTTNTKNKRQRISLNNNTYLWHLKLGHIN
Query: LDWIERLVKNGLLNELEDDSLPPCESCLEGKMTNRPFTGKGYRAKEPLELIHSDLCGPMNVKAREGFEYFISFIDDYSRYSYLYLMEHKSEALEKFKEYK
L+ IERLVKNGLL+ELE++SLP CESCLEGKMT RPFTGKG+RAKEPLEL+HSDLCGPMNVKAR GFEYFI+F DDYSRY Y+YLM+HKSEALEKFKEYK
Subjt: LDWIERLVKNGLLNELEDDSLPPCESCLEGKMTNRPFTGKGYRAKEPLELIHSDLCGPMNVKAREGFEYFISFIDDYSRYSYLYLMEHKSEALEKFKEYK
Query: TKVENLLCKKVKILRSDRGGEYMDLRF
+VEN L K +K RSDRGGEYMDL+F
Subjt: TKVENLLCKKVKILRSDRGGEYMDLRF
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| A0A5A7T2V9 Gag/pol protein | 1.0e-112 | 90.75 | Show/hide |
Query: MFLENLYIVPKIKRNLVFVSCLIEHMYSINFSMNEAFISKNGVHICSAKLENNLYVLRPNEAKAVLNHEMFRTTNTKNKRQRISLNNNTYLWHLKLGHIN
MFLENLYIVPKIKRNLV VSCLIEHMYSINFSMNEAFI KNGVHICSAKLENNLYVLRPNEAKAVLNHEMFRT NT+NKRQRIS NNNTYLWHL+LGHIN
Subjt: MFLENLYIVPKIKRNLVFVSCLIEHMYSINFSMNEAFISKNGVHICSAKLENNLYVLRPNEAKAVLNHEMFRTTNTKNKRQRISLNNNTYLWHLKLGHIN
Query: LDWIERLVKNGLLNELEDDSLPPCESCLEGKMTNRPFTGKGYRAKEPLELIHSDLCGPMNVKAREGFEYFISFIDDYSRYSYLYLMEHKSEALEKFKEYK
LD I RLVK+GLLN+L+D SLPPCESCLEGKMT RPFTGKGYRAKEPLELIHSDLCGPMNVKAR FEYFISFIDDYSRY YLYLMEHKSEALEKFKEYK
Subjt: LDWIERLVKNGLLNELEDDSLPPCESCLEGKMTNRPFTGKGYRAKEPLELIHSDLCGPMNVKAREGFEYFISFIDDYSRYSYLYLMEHKSEALEKFKEYK
Query: TKVENLLCKKVKILRSDRGGEYMDLRF
T+VENLL KK+KI RSDRGGEYMDL F
Subjt: TKVENLLCKKVKILRSDRGGEYMDLRF
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| A0A5A7TZD0 Gag/pol protein | 2.2e-115 | 92.51 | Show/hide |
Query: MFLENLYIVPKIKRNLVFVSCLIEHMYSINFSMNEAFISKNGVHICSAKLENNLYVLRPNEAKAVLNHEMFRTTNTKNKRQRISLNNNTYLWHLKLGHIN
MFLENLYIVPKIKRNLV VSCLIEHMYSINFSMNEAFI KNGVHICSAKLENNLYVLRPNEAKAVLNHEMFRT NT+NKRQRIS NNNTYLWHL+LGHIN
Subjt: MFLENLYIVPKIKRNLVFVSCLIEHMYSINFSMNEAFISKNGVHICSAKLENNLYVLRPNEAKAVLNHEMFRTTNTKNKRQRISLNNNTYLWHLKLGHIN
Query: LDWIERLVKNGLLNELEDDSLPPCESCLEGKMTNRPFTGKGYRAKEPLELIHSDLCGPMNVKAREGFEYFISFIDDYSRYSYLYLMEHKSEALEKFKEYK
LD I RLVKNGLLN+L+D SLPPCESCLEGKMT RPFTGKGYRAKEPLELIHSDLCGPMNVKAR GFEYFISFIDDYSRY YLYLMEHKSEALEKFKEYK
Subjt: LDWIERLVKNGLLNELEDDSLPPCESCLEGKMTNRPFTGKGYRAKEPLELIHSDLCGPMNVKAREGFEYFISFIDDYSRYSYLYLMEHKSEALEKFKEYK
Query: TKVENLLCKKVKILRSDRGGEYMDLRF
T+VENLL KK+KILRSDRGGEYMDLRF
Subjt: TKVENLLCKKVKILRSDRGGEYMDLRF
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| A0A5A7VJG3 Gag/pol protein | 6.1e-110 | 89.87 | Show/hide |
Query: MFLENLYIVPKIKRNLVFVSCLIEHMYSINFSMNEAFISKNGVHICSAKLENNLYVLRPNEAKAVLNHEMFRTTNTKNKRQRISLNNNTYLWHLKLGHIN
MFLENLYIVPKIKRNLVFVSCLIEHMYSINFSMNEAFISKNG AKLE+NLYVLRPNEAKAVLNHEMFRT NT+NKRQRIS NNNTYLWHL+L HIN
Subjt: MFLENLYIVPKIKRNLVFVSCLIEHMYSINFSMNEAFISKNGVHICSAKLENNLYVLRPNEAKAVLNHEMFRTTNTKNKRQRISLNNNTYLWHLKLGHIN
Query: LDWIERLVKNGLLNELEDDSLPPCESCLEGKMTNRPFTGKGYRAKEPLELIHSDLCGPMNVKAREGFEYFISFIDDYSRYSYLYLMEHKSEALEKFKEYK
LD I RLVKNGLLN+L+DDSLPPCESCLEGKMT RPFTGK YRAKEPLELIHSDLCGPMNVKAR GFEYFISFIDDYSRY YLYLMEHK EALEKFKEYK
Subjt: LDWIERLVKNGLLNELEDDSLPPCESCLEGKMTNRPFTGKGYRAKEPLELIHSDLCGPMNVKAREGFEYFISFIDDYSRYSYLYLMEHKSEALEKFKEYK
Query: TKVENLLCKKVKILRSDRGGEYMDLRF
T+VENLL KK+KILRSDRGGEYMDLRF
Subjt: TKVENLLCKKVKILRSDRGGEYMDLRF
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| A0A5D3BNE1 Gag/pol protein | 3.5e-113 | 90.31 | Show/hide |
Query: MFLENLYIVPKIKRNLVFVSCLIEHMYSINFSMNEAFISKNGVHICSAKLENNLYVLRPNEAKAVLNHEMFRTTNTKNKRQRISLNNNTYLWHLKLGHIN
MFLENLYIVPKIKRNLV VSCLIEHMYSI+FSMNEAFISKNGVHICS KLE+NLYVL+PNE KAVLNHEMFRT NT+NKRQRIS NNNTYLWHL+LGHIN
Subjt: MFLENLYIVPKIKRNLVFVSCLIEHMYSINFSMNEAFISKNGVHICSAKLENNLYVLRPNEAKAVLNHEMFRTTNTKNKRQRISLNNNTYLWHLKLGHIN
Query: LDWIERLVKNGLLNELEDDSLPPCESCLEGKMTNRPFTGKGYRAKEPLELIHSDLCGPMNVKAREGFEYFISFIDDYSRYSYLYLMEHKSEALEKFKEYK
LD I RLVKNGLLN+LEDDSLPPCESCLEGKMT RPFTGKGYRAKEPLELIHSDLCGPMNVKA GFEYFISFIDDYS Y YLYL+EHKSEALEKFKEYK
Subjt: LDWIERLVKNGLLNELEDDSLPPCESCLEGKMTNRPFTGKGYRAKEPLELIHSDLCGPMNVKAREGFEYFISFIDDYSRYSYLYLMEHKSEALEKFKEYK
Query: TKVENLLCKKVKILRSDRGGEYMDLRF
T+VENLL KK+KILRSDRGGEYMDLRF
Subjt: TKVENLLCKKVKILRSDRGGEYMDLRF
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| SwissProt top hits | e value | %identity | Alignment |
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| P04146 Copia protein | 2.4e-18 | 32.61 | Show/hide |
Query: LENLYIVPKIKRNLVFVSCLIEHMYSINFSMNEAFISKNGVHIC-SAKLENNLYVLRPNEAKAVLNHEMFRTTNTKNKRQRISLNNNTYLWHLKLGHIN-
LE++ + NL+ V L E SI F + ISKNG+ + ++ + NN+ V+N + + + N K+K NN LWH + GHI+
Subjt: LENLYIVPKIKRNLVFVSCLIEHMYSINFSMNEAFISKNGVHIC-SAKLENNLYVLRPNEAKAVLNHEMFRTTNTKNKRQRISLNNNTYLWHLKLGHIN-
Query: --LDWIER---LVKNGLLNELEDDSLPPCESCLEGKMTNRPFTGKGYRA--KEPLELIHSDLCGPMNVKAREGFEYFISFIDDYSRYSYLYLMEHKSEAL
L I+R LLN LE S CE CL GK PF + K PL ++HSD+CGP+ + YF+ F+D ++ Y YL+++KS+
Subjt: --LDWIER---LVKNGLLNELEDDSLPPCESCLEGKMTNRPFTGKGYRA--KEPLELIHSDLCGPMNVKAREGFEYFISFIDDYSRYSYLYLMEHKSEAL
Query: EKFKEYKTKVENLLCKKVKILRSDRGGEYM
F+++ K E KV L D G EY+
Subjt: EKFKEYKTKVENLLCKKVKILRSDRGGEYM
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 5.5e-23 | 28.63 | Show/hide |
Query: MFLENLYIVPKIKRNLVFVSCLIEHMYSINFSMNEAFISKNGVHICSAKLENNLYVLRPNEAKAVLNHEMFRTTNTKNKRQRISLNNNTYLWHLKLGHIN
+ L+++ VP ++ NL+ L Y F+ + ++K + I LY + LN + IS++ LWH ++GH++
Subjt: MFLENLYIVPKIKRNLVFVSCLIEHMYSINFSMNEAFISKNGVHICSAKLENNLYVLRPNEAKAVLNHEMFRTTNTKNKRQRISLNNNTYLWHLKLGHIN
Query: LDWIERLVKNGLLNELEDDSLPPCESCLEGKMTNRPFTGKGYRAKEPLELIHSDLCGPMNVKAREGFEYFISFIDDYSRYSYLYLMEHKSEALEKFKEYK
++ L K L++ + ++ PC+ CL GK F R L+L++SD+CGPM +++ G +YF++FIDD SR ++Y+++ K + + F+++
Subjt: LDWIERLVKNGLLNELEDDSLPPCESCLEGKMTNRPFTGKGYRAKEPLELIHSDLCGPMNVKAREGFEYFISFIDDYSRYSYLYLMEHKSEALEKFKEYK
Query: TKVENLLCKKVKILRSDRGGEYMDLRF
VE +K+K LRSD GGEY F
Subjt: TKVENLLCKKVKILRSDRGGEYMDLRF
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| Q12491 Transposon Ty2-B Gag-Pol polyprotein | 3.7e-11 | 30.3 | Show/hide |
Query: TTNTKNKRQRISLNNNTY-LWHLKLGHINLDWIERLVKNGLLNELEDDSLP-------PCESCLEGKMTNRPFTGKGYRAK-----EPLELIHSDLCGPM
T N NK + S+N Y L H LGH N I++ +K + L++ + C CL GK T KG R K EP + +H+D+ GP+
Subjt: TTNTKNKRQRISLNNNTY-LWHLKLGHINLDWIERLVKNGLLNELEDDSLP-------PCESCLEGKMTNRPFTGKGYRAK-----EPLELIHSDLCGPM
Query: NVKAREGFEYFISFIDDYSRYSYLYLMEHKSE--ALEKFKEYKTKVENLLCKKVKILRSDRGGEY
+ + YFISF D+ +R+ ++Y + + E L F ++N +V +++ DRG EY
Subjt: NVKAREGFEYFISFIDDYSRYSYLYLMEHKSE--ALEKFKEYKTKVENLLCKKVKILRSDRGGEY
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 3.6e-14 | 25.22 | Show/hide |
Query: LENLYIVPKIKRNLVFVSCLIE------HMYSINFSMNEAFISKNGVHICSAKLENNLYVLRPNEAKAVLNHEMFRTTNTKNKRQRISLNNNTYLWHLKL
L N+ VP I +NL+ V L + +F + + GV + K ++ LY ++ V +F + ++K WH +L
Subjt: LENLYIVPKIKRNLVFVSCLIE------HMYSINFSMNEAFISKNGVHICSAKLENNLYVLRPNEAKAVLNHEMFRTTNTKNKRQRISLNNNTYLWHLKL
Query: GHINLDWIERLVKNGLLNELE-DDSLPPCESCLEGKMTNRPFTGKGYRAKEPLELIHSDLCGPMNVKAREGFEYFISFIDDYSRYSYLYLMEHKSEALEK
GH + ++ N L+ L C CL K PF+ + PLE I+SD+ + + + + Y++ F+D ++RY++LY ++ KS+ E
Subjt: GHINLDWIERLVKNGLLNELE-DDSLPPCESCLEGKMTNRPFTGKGYRAKEPLELIHSDLCGPMNVKAREGFEYFISFIDDYSRYSYLYLMEHKSEALEK
Query: FKEYKTKVENLLCKKVKILRSDRGGEYMDL
F +K +EN ++ SD GGE++ L
Subjt: FKEYKTKVENLLCKKVKILRSDRGGEYMDL
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 9.4e-15 | 27.63 | Show/hide |
Query: LENLYIVPKIKRNLVFVSCLIE-HMYSINFSMNEAFIS--KNGVHICSAKLENNLYVLRPNEAKAVLNHEMFRTTNTKNKRQRISLNNNTYLWHLKLGHI
L + VP I +NL+ V L + S+ F + GV + K ++ LY ++AV MF + +K WH +LGH
Subjt: LENLYIVPKIKRNLVFVSCLIE-HMYSINFSMNEAFIS--KNGVHICSAKLENNLYVLRPNEAKAVLNHEMFRTTNTKNKRQRISLNNNTYLWHLKLGHI
Query: NLDWIERLVKNGLLNELE-DDSLPPCESCLEGKMTNRPFTGKGYRAKEPLELIHSDLCGPMNVKAREGFEYFISFIDDYSRYSYLYLMEHKSEALEKFKE
+L + ++ N L L L C C K PF+ + +PLE I+SD+ + + + + Y++ F+D ++RY++LY ++ KS+ + F
Subjt: NLDWIERLVKNGLLNELE-DDSLPPCESCLEGKMTNRPFTGKGYRAKEPLELIHSDLCGPMNVKAREGFEYFISFIDDYSRYSYLYLMEHKSEALEKFKE
Query: YKTKVENLLCKKVKILRSDRGGEYMDLR
+K+ VEN ++ L SD GGE++ LR
Subjt: YKTKVENLLCKKVKILRSDRGGEYMDLR
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