| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0046026.1 putative Polyprotein [Cucumis melo var. makuwa] | 1.6e-52 | 90.43 | Show/hide |
Query: MDSLKSNRTWHLVDLPPGCKAVGCKWVLRKKLKPDGSVDKYKARLVAKGFRERKNIDFFDTFFPITRITSIRVLISIVALKNFLIHQMDVKTAFLNGDLE
MDSL+SNRTWHLVDLPPGCKA+GCKWVLRKKLKPDGSVDKYKARLVAKGFR+R+NIDFFDTF P+TRITSIRVLISI AL N LIHQMDVKTAFLN DLE
Subjt: MDSLKSNRTWHLVDLPPGCKAVGCKWVLRKKLKPDGSVDKYKARLVAKGFRERKNIDFFDTFFPITRITSIRVLISIVALKNFLIHQMDVKTAFLNGDLE
Query: EEIYMEQPEGFIVHG
EEIYMEQ EGFIVHG
Subjt: EEIYMEQPEGFIVHG
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| KAA0067623.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 2.6e-55 | 100 | Show/hide |
Query: MDSLKSNRTWHLVDLPPGCKAVGCKWVLRKKLKPDGSVDKYKARLVAKGFRERKNIDFFDTFFPITRITSIRVLISIVALKNFLIHQMDVKTAFLNGDLE
MDSLKSNRTWHLVDLPPGCKAVGCKWVLRKKLKPDGSVDKYKARLVAKGFRERKNIDFFDTFFPITRITSIRVLISIVALKNFLIHQMDVKTAFLNGDLE
Subjt: MDSLKSNRTWHLVDLPPGCKAVGCKWVLRKKLKPDGSVDKYKARLVAKGFRERKNIDFFDTFFPITRITSIRVLISIVALKNFLIHQMDVKTAFLNGDLE
Query: EEIYMEQPE
EEIYMEQPE
Subjt: EEIYMEQPE
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| PNX67522.1 retrotransposon protein putative Ty1-copia sub-class, partial [Trifolium pratense] | 7.2e-53 | 85.22 | Show/hide |
Query: MDSLKSNRTWHLVDLPPGCKAVGCKWVLRKKLKPDGSVDKYKARLVAKGFRERKNIDFFDTFFPITRITSIRVLISIVALKNFLIHQMDVKTAFLNGDLE
MDSL+SN+TWHLVDLPPGCK +GCKW+L+KKLKPDG+VDKYKARLVAKGFR+R+NIDFFDTF P+TRITSIRVLISIVA+ N ++HQMDVKTAFLNGDLE
Subjt: MDSLKSNRTWHLVDLPPGCKAVGCKWVLRKKLKPDGSVDKYKARLVAKGFRERKNIDFFDTFFPITRITSIRVLISIVALKNFLIHQMDVKTAFLNGDLE
Query: EEIYMEQPEGFIVHG
EEIYMEQPEGF+VHG
Subjt: EEIYMEQPEGFIVHG
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| TYK11906.1 putative Polyprotein [Cucumis melo var. makuwa] | 2.1e-52 | 89.57 | Show/hide |
Query: MDSLKSNRTWHLVDLPPGCKAVGCKWVLRKKLKPDGSVDKYKARLVAKGFRERKNIDFFDTFFPITRITSIRVLISIVALKNFLIHQMDVKTAFLNGDLE
MDSL+SNRTWHLVDLPPGCKA+GCKWVLRKKLKPDGSVDKYKARLVAKGFR+R+NIDFFDTF P+TRITSIRVLISI AL N LIHQMDVKTAFLN DLE
Subjt: MDSLKSNRTWHLVDLPPGCKAVGCKWVLRKKLKPDGSVDKYKARLVAKGFRERKNIDFFDTFFPITRITSIRVLISIVALKNFLIHQMDVKTAFLNGDLE
Query: EEIYMEQPEGFIVHG
EEIYM+Q EGFIVHG
Subjt: EEIYMEQPEGFIVHG
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| TYK28563.1 putative ubiquitin carrier protein [Cucumis melo var. makuwa] | 1.6e-52 | 88.7 | Show/hide |
Query: MDSLKSNRTWHLVDLPPGCKAVGCKWVLRKKLKPDGSVDKYKARLVAKGFRERKNIDFFDTFFPITRITSIRVLISIVALKNFLIHQMDVKTAFLNGDLE
MDSL+SNRTWHLVDLPPGCKA+ CKWVLRKKLKPDGSVDKYK RLVAKGFR+R+NIDFFDTFF +TRITSIRVLISI AL N LIHQMDVKT FLNGDLE
Subjt: MDSLKSNRTWHLVDLPPGCKAVGCKWVLRKKLKPDGSVDKYKARLVAKGFRERKNIDFFDTFFPITRITSIRVLISIVALKNFLIHQMDVKTAFLNGDLE
Query: EEIYMEQPEGFIVHG
EEIYMEQ EGFIVHG
Subjt: EEIYMEQPEGFIVHG
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A2K3KMQ2 Retrotransposon protein putative Ty1-copia sub-class (Fragment) | 3.5e-53 | 85.22 | Show/hide |
Query: MDSLKSNRTWHLVDLPPGCKAVGCKWVLRKKLKPDGSVDKYKARLVAKGFRERKNIDFFDTFFPITRITSIRVLISIVALKNFLIHQMDVKTAFLNGDLE
MDSL+SN+TWHLVDLPPGCK +GCKW+L+KKLKPDG+VDKYKARLVAKGFR+R+NIDFFDTF P+TRITSIRVLISIVA+ N ++HQMDVKTAFLNGDLE
Subjt: MDSLKSNRTWHLVDLPPGCKAVGCKWVLRKKLKPDGSVDKYKARLVAKGFRERKNIDFFDTFFPITRITSIRVLISIVALKNFLIHQMDVKTAFLNGDLE
Query: EEIYMEQPEGFIVHG
EEIYMEQPEGF+VHG
Subjt: EEIYMEQPEGFIVHG
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| A0A5A7TV55 Putative Polyprotein | 7.8e-53 | 90.43 | Show/hide |
Query: MDSLKSNRTWHLVDLPPGCKAVGCKWVLRKKLKPDGSVDKYKARLVAKGFRERKNIDFFDTFFPITRITSIRVLISIVALKNFLIHQMDVKTAFLNGDLE
MDSL+SNRTWHLVDLPPGCKA+GCKWVLRKKLKPDGSVDKYKARLVAKGFR+R+NIDFFDTF P+TRITSIRVLISI AL N LIHQMDVKTAFLN DLE
Subjt: MDSLKSNRTWHLVDLPPGCKAVGCKWVLRKKLKPDGSVDKYKARLVAKGFRERKNIDFFDTFFPITRITSIRVLISIVALKNFLIHQMDVKTAFLNGDLE
Query: EEIYMEQPEGFIVHG
EEIYMEQ EGFIVHG
Subjt: EEIYMEQPEGFIVHG
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| A0A5A7VHR4 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.3e-55 | 100 | Show/hide |
Query: MDSLKSNRTWHLVDLPPGCKAVGCKWVLRKKLKPDGSVDKYKARLVAKGFRERKNIDFFDTFFPITRITSIRVLISIVALKNFLIHQMDVKTAFLNGDLE
MDSLKSNRTWHLVDLPPGCKAVGCKWVLRKKLKPDGSVDKYKARLVAKGFRERKNIDFFDTFFPITRITSIRVLISIVALKNFLIHQMDVKTAFLNGDLE
Subjt: MDSLKSNRTWHLVDLPPGCKAVGCKWVLRKKLKPDGSVDKYKARLVAKGFRERKNIDFFDTFFPITRITSIRVLISIVALKNFLIHQMDVKTAFLNGDLE
Query: EEIYMEQPE
EEIYMEQPE
Subjt: EEIYMEQPE
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| A0A5D3CNA1 Putative Polyprotein | 1.0e-52 | 89.57 | Show/hide |
Query: MDSLKSNRTWHLVDLPPGCKAVGCKWVLRKKLKPDGSVDKYKARLVAKGFRERKNIDFFDTFFPITRITSIRVLISIVALKNFLIHQMDVKTAFLNGDLE
MDSL+SNRTWHLVDLPPGCKA+GCKWVLRKKLKPDGSVDKYKARLVAKGFR+R+NIDFFDTF P+TRITSIRVLISI AL N LIHQMDVKTAFLN DLE
Subjt: MDSLKSNRTWHLVDLPPGCKAVGCKWVLRKKLKPDGSVDKYKARLVAKGFRERKNIDFFDTFFPITRITSIRVLISIVALKNFLIHQMDVKTAFLNGDLE
Query: EEIYMEQPEGFIVHG
EEIYM+Q EGFIVHG
Subjt: EEIYMEQPEGFIVHG
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| A0A5D3DXV9 Putative ubiquitin carrier protein | 7.8e-53 | 88.7 | Show/hide |
Query: MDSLKSNRTWHLVDLPPGCKAVGCKWVLRKKLKPDGSVDKYKARLVAKGFRERKNIDFFDTFFPITRITSIRVLISIVALKNFLIHQMDVKTAFLNGDLE
MDSL+SNRTWHLVDLPPGCKA+ CKWVLRKKLKPDGSVDKYK RLVAKGFR+R+NIDFFDTFF +TRITSIRVLISI AL N LIHQMDVKT FLNGDLE
Subjt: MDSLKSNRTWHLVDLPPGCKAVGCKWVLRKKLKPDGSVDKYKARLVAKGFRERKNIDFFDTFFPITRITSIRVLISIVALKNFLIHQMDVKTAFLNGDLE
Query: EEIYMEQPEGFIVHG
EEIYMEQ EGFIVHG
Subjt: EEIYMEQPEGFIVHG
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 1.8e-22 | 46.36 | Show/hide |
Query: MDSLKSNRTWHLVDLPPGCKAVGCKWVLRKKLKPDGSVDKYKARLVAKGFRERKNIDFFDTFFPITRITSIRVLISIVALKNFLIHQMDVKTAFLNGDLE
+++ K N TW + P V +WV K G+ +YKARLVA+GF ++ ID+ +TF P+ RI+S R ++S+V N +HQMDVKTAFLNG L+
Subjt: MDSLKSNRTWHLVDLPPGCKAVGCKWVLRKKLKPDGSVDKYKARLVAKGFRERKNIDFFDTFFPITRITSIRVLISIVALKNFLIHQMDVKTAFLNGDLE
Query: EEIYMEQPEG
EEIYM P+G
Subjt: EEIYMEQPEG
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.5e-29 | 53.91 | Show/hide |
Query: MDSLKSNRTWHLVDLPPGCKAVGCKWVLRKKLKPDGSVDKYKARLVAKGFRERKNIDFFDTFFPITRITSIRVLISIVALKNFLIHQMDVKTAFLNGDLE
M+SL+ N T+ LV+LP G + + CKWV + K D + +YKARLV KGF ++K IDF + F P+ ++TSIR ++S+ A + + Q+DVKTAFL+GDLE
Subjt: MDSLKSNRTWHLVDLPPGCKAVGCKWVLRKKLKPDGSVDKYKARLVAKGFRERKNIDFFDTFFPITRITSIRVLISIVALKNFLIHQMDVKTAFLNGDLE
Query: EEIYMEQPEGFIVHG
EEIYMEQPEGF V G
Subjt: EEIYMEQPEGFIVHG
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| P92520 Uncharacterized mitochondrial protein AtMg00820 | 1.4e-14 | 44.16 | Show/hide |
Query: MDSLKSNRTWHLVDLPPGCKAVGCKWVLRKKLKPDGSVDKYKARLVAKGFRERKNIDFFDTFFPITRITSIRVLISI
+D+L N+TW LV P +GCKWV + KL DG++D+ KARLVAKGF + + I F +T+ P+ R +IR ++++
Subjt: MDSLKSNRTWHLVDLPPGCKAVGCKWVLRKKLKPDGSVDKYKARLVAKGFRERKNIDFFDTFFPITRITSIRVLISI
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 2.5e-24 | 46.73 | Show/hide |
Query: NRTWHLVDLPPG-CKAVGCKWVLRKKLKPDGSVDKYKARLVAKGFRERKNIDFFDTFFPITRITSIRVLISIVALKNFLIHQMDVKTAFLNGDLEEEIYM
N TW LV PP VGC+W+ KK DGS+++YKARLVAKG+ +R +D+ +TF P+ + TSIR+++ + +++ I Q+DV AFL G L +++YM
Subjt: NRTWHLVDLPPG-CKAVGCKWVLRKKLKPDGSVDKYKARLVAKGFRERKNIDFFDTFFPITRITSIRVLISIVALKNFLIHQMDVKTAFLNGDLEEEIYM
Query: EQPEGFI
QP GFI
Subjt: EQPEGFI
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 1.1e-24 | 46.73 | Show/hide |
Query: NRTWHLV-DLPPGCKAVGCKWVLRKKLKPDGSVDKYKARLVAKGFRERKNIDFFDTFFPITRITSIRVLISIVALKNFLIHQMDVKTAFLNGDLEEEIYM
N TW LV PP VGC+W+ KK DGS+++YKARLVAKG+ +R +D+ +TF P+ + TSIR+++ + +++ I Q+DV AFL G L +E+YM
Subjt: NRTWHLV-DLPPGCKAVGCKWVLRKKLKPDGSVDKYKARLVAKGFRERKNIDFFDTFFPITRITSIRVLISIVALKNFLIHQMDVKTAFLNGDLEEEIYM
Query: EQPEGFI
QP GF+
Subjt: EQPEGFI
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