CuGenDBv2

Gene ID	Cmc09g0252901
Organism	Cucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	mediator of RNA polymerase II transcription subunit 23
Genome location	CMiso1.1chr09:18897875..18911639
RNA-Seq Expression	Cmc09g0252901
Synteny	Cmc09g0252901
Gene Ontology terms	GO:0006357 - regulation of transcription by RNA polymerase II (biological process) GO:0006508 - proteolysis (biological process) GO:0010628 - positive regulation of gene expression (biological process) GO:0005667 - transcription factor complex (cellular component) GO:0016592 - mediator complex (cellular component) GO:0008236 - serine-type peptidase activity (molecular function)
InterPro domains	IPR021629 - Mediator complex, subunit Med23

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_008467111.1 PREDICTED: mediator of RNA polymerase II transcription subunit 23 isoform X1 [Cucumis melo]

0.0e+00

100

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Query:  MDQSQRSSSLTAVSTSRAYQFHPARAAIVNLFDLYLGRSNRLKHEDSAREPPNKAQKRVLAINRELPPRNEQFLLDFEQIQNQFSDHDQLRAVTESVLIS
        MDQSQRSSSLTAVSTSRAYQFHPARAAIVNLFDLYLGRSNRLKHEDSAREPPNKAQKRVLAINRELPPRNEQFLLDFEQIQNQFSDHDQLRAVTESVLIS
Subjt:  MDQSQRSSSLTAVSTSRAYQFHPARAAIVNLFDLYLGRSNRLKHEDSAREPPNKAQKRVLAINRELPPRNEQFLLDFEQIQNQFSDHDQLRAVTESVLIS

Query:  LVVQCSGHVPRAEFLLFALRSLCSISYINWDTFLPSLLSSISSAEVSMGQGSQAAPTVSTTNLSQSGVLPSSNPVPNSSTFQSSNPASPLPSVHGISSPA
        LVVQCSGHVPRAEFLLFALRSLCSISYINWDTFLPSLLSSISSAEVSMGQGSQAAPTVSTTNLSQSGVLPSSNPVPNSSTFQSSNPASPLPSVHGISSPA
Subjt:  LVVQCSGHVPRAEFLLFALRSLCSISYINWDTFLPSLLSSISSAEVSMGQGSQAAPTVSTTNLSQSGVLPSSNPVPNSSTFQSSNPASPLPSVHGISSPA

Query:  QSSIDPSSCTALSPIKSSDLSGTGLPSAVRVNSFLRNNAISSLRQLCCKIILSGLKFDLKPVTHADIFSHMLNWMVNWDQRQQGMEESENMKSWRPDKAL
        QSSIDPSSCTALSPIKSSDLSGTGLPSAVRVNSFLRNNAISSLRQLCCKIILSGLKFDLKPVTHADIFSHMLNWMVNWDQRQQGMEESENMKSWRPDKAL
Subjt:  QSSIDPSSCTALSPIKSSDLSGTGLPSAVRVNSFLRNNAISSLRQLCCKIILSGLKFDLKPVTHADIFSHMLNWMVNWDQRQQGMEESENMKSWRPDKAL

Query:  IEWLHSCLDVVWLLVEENKCRVPFYELLRSGLQFIDNIPDDEALFTLILEIHRRRDMMAMHMQMLDQHLHSPTFGTQRIFSQTMQNISGEAVASLRYSPI
        IEWLHSCLDVVWLLVEENKCRVPFYELLRSGLQFIDNIPDDEALFTLILEIHRRRDMMAMHMQMLDQHLHSPTFGTQRIFSQTMQNISGEAVASLRYSPI
Subjt:  IEWLHSCLDVVWLLVEENKCRVPFYELLRSGLQFIDNIPDDEALFTLILEIHRRRDMMAMHMQMLDQHLHSPTFGTQRIFSQTMQNISGEAVASLRYSPI

Query:  TYPSVLGEPLHGEDIASAIQRGTRDWERAMRCIRHALRTTPSPDWWKRVLLVAPGYRSSAQGLSPGAVFTSEMICEATIDRIFELLKLTNSEIHCWQEWL
        TYPSVLGEPLHGEDIASAIQRGTRDWERAMRCIRHALRTTPSPDWWKRVLLVAPGYRSSAQGLSPGAVFTSEMICEATIDRIFELLKLTNSEIHCWQEWL
Subjt:  TYPSVLGEPLHGEDIASAIQRGTRDWERAMRCIRHALRTTPSPDWWKRVLLVAPGYRSSAQGLSPGAVFTSEMICEATIDRIFELLKLTNSEIHCWQEWL

Query:  VFSDIFFFLMKSGCIDFADFVAKLFSRVTEGGQHVLRTNHVTWLFAQIIRVELVMSALNSDARKVETTRKIISFHREDKNADPNNPQSILLDFISSCQNL
        VFSDIFFFLMKSGCIDFADFVAKLFSRVTEGGQHVLRTNHVTWLFAQIIRVELVMSALNSDARKVETTRKIISFHREDKNADPNNPQSILLDFISSCQNL
Subjt:  VFSDIFFFLMKSGCIDFADFVAKLFSRVTEGGQHVLRTNHVTWLFAQIIRVELVMSALNSDARKVETTRKIISFHREDKNADPNNPQSILLDFISSCQNL

Query:  RIWSLNTTTREYLNSEQLQKGKQIDEWWRQASKG
        RIWSLNTTTREYLNSEQLQKGKQIDEWWRQASKG
Subjt:  RIWSLNTTTREYLNSEQLQKGKQIDEWWRQASKG

XP_011655454.1 mediator of RNA polymerase II transcription subunit 23 [Cucumis sativus]

0.0e+00

98.58

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Query:  MDQSQRSSSLTAVSTSRAYQFHPARAAIVNLFDLYLGRSNRLKHEDSAREPPNKAQKRVLAINRELPPRNEQFLLDFEQIQNQFSDHDQLRAVTESVLIS
        MDQSQRSSSLT VSTSRAYQFHPARAAIVNLFDLYLGRSNRLKHEDSAREPPNKAQKRVLAINRELPPRNEQFLLDFEQIQNQFSDHDQLRAVTESVLIS
Subjt:  MDQSQRSSSLTAVSTSRAYQFHPARAAIVNLFDLYLGRSNRLKHEDSAREPPNKAQKRVLAINRELPPRNEQFLLDFEQIQNQFSDHDQLRAVTESVLIS

Query:  LVVQCSGHVPRAEFLLFALRSLCSISYINWDTFLPSLLSSISSAEVSMGQGSQAAPTVSTTNLSQSGVLPSSNPVPNSSTFQSSNPASPLPSVHGISSPA
        LVVQCSGHVPRAEFLLFALRSLCSI YINWDTFLPSLLSSISSAEVSMGQGSQAAPTVSTTNLSQSGVLPSSNPVPNSSTFQSSNPASPLP VHGISSPA
Subjt:  LVVQCSGHVPRAEFLLFALRSLCSISYINWDTFLPSLLSSISSAEVSMGQGSQAAPTVSTTNLSQSGVLPSSNPVPNSSTFQSSNPASPLPSVHGISSPA

Query:  QSSIDPSSCTALSPIKSSDLSGTGLPSAVRVNSFLRNNAISSLRQLCCKIILSGLKFDLKPVTHADIFSHMLNWMVNWDQRQQGMEESENMKSWRPDKAL
        QSSIDPSSCTALSPIKSSDLSGTGLPSAVRVNSFLRNNAISSLRQLCCKIILSGLKFDLKPVTHADIFSHMLNWMVNWDQRQQGMEESENMKSWRPDKAL
Subjt:  QSSIDPSSCTALSPIKSSDLSGTGLPSAVRVNSFLRNNAISSLRQLCCKIILSGLKFDLKPVTHADIFSHMLNWMVNWDQRQQGMEESENMKSWRPDKAL

Query:  IEWLHSCLDVVWLLVEENKCRVPFYELLRSGLQFIDNIPDDEALFTLILEIHRRRDMMAMHMQMLDQHLHSPTFGTQRIFSQTMQNISGEAVASLRYSPI
        IEWLHSCLDVVWLLVEENKCRVPFYELLRSGLQFIDNIPDDEALFTL+LEIHRRRDMMAMHMQMLDQHLHSPTFGTQRIFSQTMQNISGEAVASLRYSPI
Subjt:  IEWLHSCLDVVWLLVEENKCRVPFYELLRSGLQFIDNIPDDEALFTLILEIHRRRDMMAMHMQMLDQHLHSPTFGTQRIFSQTMQNISGEAVASLRYSPI

Query:  TYPSVLGEPLHGEDIASAIQRGTRDWERAMRCIRHALRTTPSPDWWKRVLLVAPGYRSSAQGLSPGAVFTSEMICEATIDRIFELLKLTNSEIHCWQEWL
        TYPSVLGEPLHGEDIASAIQRGTRDWERAMRCIRHALRTTPSPDWWKRVLLVAPGYRSSAQGLSPGAVFTSEMICEATIDRIFELLKLTNSEIHCWQEWL
Subjt:  TYPSVLGEPLHGEDIASAIQRGTRDWERAMRCIRHALRTTPSPDWWKRVLLVAPGYRSSAQGLSPGAVFTSEMICEATIDRIFELLKLTNSEIHCWQEWL

Query:  VFSDIFFFLMKSGCIDFADFVAKLFSRVTEGGQHVLRTNHVTWLFAQIIRVELVMSALNSDARKVETTRKIISFHREDKNADPNNPQSILLDFISSCQNL
        VFSDIFFFLMKSGCIDF DFVAKLFSRVTEGGQHVLRTNHVTWLF QIIRVELVMSALNSDARKVETTRKI+SFHREDKNADPNNPQSILLDFISSCQNL
Subjt:  VFSDIFFFLMKSGCIDFADFVAKLFSRVTEGGQHVLRTNHVTWLFAQIIRVELVMSALNSDARKVETTRKIISFHREDKNADPNNPQSILLDFISSCQNL

Query:  RIWSLNTTTREYLNSEQLQKGKQIDEWWRQASKG
        RIWSLNT TRE LNSEQLQKGKQIDEWWRQASKG
Subjt:  RIWSLNTTTREYLNSEQLQKGKQIDEWWRQASKG

XP_022973546.1 mediator of RNA polymerase II transcription subunit 23 [Cucurbita maxima]

0.0e+00

96.22

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Query:  MDQSQRSSSLTAVSTSRAYQFHPARAAIVNLFDLYLGRSNRLKHEDSAREPPNKAQKRVLAINRELPPRNEQFLLDFEQIQNQFSDHDQLRAVTESVLIS
        MDQ QRSSS+TAVSTSRAYQFHPARAAI NLFDLYLGRSNRLK EDSAREPPNKAQKRVLAINRELPPRNEQFLLDFEQIQNQF+D+DQL AVTESVLIS
Subjt:  MDQSQRSSSLTAVSTSRAYQFHPARAAIVNLFDLYLGRSNRLKHEDSAREPPNKAQKRVLAINRELPPRNEQFLLDFEQIQNQFSDHDQLRAVTESVLIS

Query:  LVVQCSGHVPRAEFLLFALRSLCSISYINWDTFLPSLLSSISSAEVSMGQGSQAAP-TVSTTNLSQSGVLPSSNPVPNSSTFQSSNPASPLPSVHGISSP
        LVVQCSGHVPRAEFLLFALRSLCSI YINWDTFLPSLLSSISSAEVS+GQGSQAAP TVSTTNLSQSGVLPSSNPVPNSSTFQSSNPASPLPS+HGISSP
Subjt:  LVVQCSGHVPRAEFLLFALRSLCSISYINWDTFLPSLLSSISSAEVSMGQGSQAAP-TVSTTNLSQSGVLPSSNPVPNSSTFQSSNPASPLPSVHGISSP

Query:  AQSSIDPSSCTALSPIKSSDLSGTGLPSAVRVNSFLRNNAISSLRQLCCKIILSGLKFDLKPVTHADIFSHMLNWMVNWDQRQQGMEESENMKSWRPDKA
        AQSSIDP+SCTALSPIKSSDLSGTGLPSAVRVNSFLRNNAISSLRQLCCKIILSGLKFDLKPVT ADIFSHMLNWMVNWDQRQQG+EESENMKSWRPDKA
Subjt:  AQSSIDPSSCTALSPIKSSDLSGTGLPSAVRVNSFLRNNAISSLRQLCCKIILSGLKFDLKPVTHADIFSHMLNWMVNWDQRQQGMEESENMKSWRPDKA

Query:  LIEWLHSCLDVVWLLVEENKCRVPFYELLRSGLQFIDNIPDDEALFTLILEIHRRRDMMAMHMQMLDQHLHSPTFGTQRIFSQTMQNISGEAVASLRYSP
        LIEWLHSCLDVVWLLVEENKCRVPFYELLRSGLQFIDNIPDDEALFTLILEIHRRRDMMAMHMQMLDQHLH PTFGTQRIFSQTMQNISGEAVAS R+SP
Subjt:  LIEWLHSCLDVVWLLVEENKCRVPFYELLRSGLQFIDNIPDDEALFTLILEIHRRRDMMAMHMQMLDQHLHSPTFGTQRIFSQTMQNISGEAVASLRYSP

Query:  ITYPSVLGEPLHGEDIASAIQRGTRDWERAMRCIRHALRTTPSPDWWKRVLLVAPGYRSSAQGLSPGAVFTSEMICEATIDRIFELLKLTNSEIHCWQEW
        ITYPSVLGEPLHGEDIASAIQRGTRDWERAMRCIRHALRTTPSP+WWKRVLLVAPGYRS AQGLSPGAVFTSEMICEATIDRIFELLKLTNSEIHCWQEW
Subjt:  ITYPSVLGEPLHGEDIASAIQRGTRDWERAMRCIRHALRTTPSPDWWKRVLLVAPGYRSSAQGLSPGAVFTSEMICEATIDRIFELLKLTNSEIHCWQEW

Query:  LVFSDIFFFLMKSGCIDFADFVAKLFSRVTEGGQHVLRTNHVTWLFAQIIRVELVMSALNSDARKVETTRKIISFHREDKNADPNNPQSILLDFISSCQN
        LVFSDIF+FLMKSGCIDFADFVAKLFSRVTEGG HVLRTNHVTWLFAQIIRVELVMSALNSDARKVETTRKI+SFHREDK+ADPNNPQSILLDFISSCQN
Subjt:  LVFSDIFFFLMKSGCIDFADFVAKLFSRVTEGGQHVLRTNHVTWLFAQIIRVELVMSALNSDARKVETTRKIISFHREDKNADPNNPQSILLDFISSCQN

Query:  LRIWSLNTTTREYLNSEQLQKGKQIDEWWRQASKG
        LRIWSLNTTTREYLN+EQLQKGKQIDEWWRQASKG
Subjt:  LRIWSLNTTTREYLNSEQLQKGKQIDEWWRQASKG

XP_023551559.1 mediator of RNA polymerase II transcription subunit 23 [Cucurbita pepo subsp. pepo]

0.0e+00

96.22

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Query:  MDQSQRSSSLTAVSTSRAYQFHPARAAIVNLFDLYLGRSNRLKHEDSAREPPNKAQKRVLAINRELPPRNEQFLLDFEQIQNQFSDHDQLRAVTESVLIS
        MDQ QRSSS+TAVSTSRAYQFHPARAAI NLFDLYLGRSNRLK EDSAREPPNKAQKRVLAINRELPPRNEQFLLDFEQIQNQF+D+DQL AVTESVLIS
Subjt:  MDQSQRSSSLTAVSTSRAYQFHPARAAIVNLFDLYLGRSNRLKHEDSAREPPNKAQKRVLAINRELPPRNEQFLLDFEQIQNQFSDHDQLRAVTESVLIS

Query:  LVVQCSGHVPRAEFLLFALRSLCSISYINWDTFLPSLLSSISSAEVSMGQGSQAAP-TVSTTNLSQSGVLPSSNPVPNSSTFQSSNPASPLPSVHGISSP
        LVVQCSGHVPRAEFLLFALRSLCSI YINWDTFLPSLLSSISSAEVS+GQGSQAAP TVSTTNLSQSGVLPSSNPVPNSSTFQSSNPASPLPSVHGISSP
Subjt:  LVVQCSGHVPRAEFLLFALRSLCSISYINWDTFLPSLLSSISSAEVSMGQGSQAAP-TVSTTNLSQSGVLPSSNPVPNSSTFQSSNPASPLPSVHGISSP

Query:  AQSSIDPSSCTALSPIKSSDLSGTGLPSAVRVNSFLRNNAISSLRQLCCKIILSGLKFDLKPVTHADIFSHMLNWMVNWDQRQQGMEESENMKSWRPDKA
        AQSSIDP+SCTALSPIKSSDLSGTGLPSAVRVNSFLRNNAISSLRQLCCKIILSGLKFDLKPVT ADIFSHMLNWMVNWDQRQQG+EESENMKSWRPDKA
Subjt:  AQSSIDPSSCTALSPIKSSDLSGTGLPSAVRVNSFLRNNAISSLRQLCCKIILSGLKFDLKPVTHADIFSHMLNWMVNWDQRQQGMEESENMKSWRPDKA

Query:  LIEWLHSCLDVVWLLVEENKCRVPFYELLRSGLQFIDNIPDDEALFTLILEIHRRRDMMAMHMQMLDQHLHSPTFGTQRIFSQTMQNISGEAVASLRYSP
        LIEWLHSCLDVVWLLVEENKCRVPFYELLRSGLQFIDNIPDDEALFTLILEIHRRRDMMAMHMQMLDQHLH PTFGTQRIFSQTMQNISGEAVAS R+SP
Subjt:  LIEWLHSCLDVVWLLVEENKCRVPFYELLRSGLQFIDNIPDDEALFTLILEIHRRRDMMAMHMQMLDQHLHSPTFGTQRIFSQTMQNISGEAVASLRYSP

Query:  ITYPSVLGEPLHGEDIASAIQRGTRDWERAMRCIRHALRTTPSPDWWKRVLLVAPGYRSSAQGLSPGAVFTSEMICEATIDRIFELLKLTNSEIHCWQEW
        ITYPSVLGEPLHGEDIASAIQRGTRDWERAMRCIRHALRTTPSP+WWKRVLLVAPGYRS AQGLSPGAVFTSEMICEATIDRIFELLKLTNSEIHCWQEW
Subjt:  ITYPSVLGEPLHGEDIASAIQRGTRDWERAMRCIRHALRTTPSPDWWKRVLLVAPGYRSSAQGLSPGAVFTSEMICEATIDRIFELLKLTNSEIHCWQEW

Query:  LVFSDIFFFLMKSGCIDFADFVAKLFSRVTEGGQHVLRTNHVTWLFAQIIRVELVMSALNSDARKVETTRKIISFHREDKNADPNNPQSILLDFISSCQN
        LVFSDIF+FLMKSGCIDFADFVAKLFSRVTEGG HVLRTNHVTWLFAQIIRVELVMSALNSDARKVETTRKI+SFHREDK+ADPNNPQSILLDFISSCQN
Subjt:  LVFSDIFFFLMKSGCIDFADFVAKLFSRVTEGGQHVLRTNHVTWLFAQIIRVELVMSALNSDARKVETTRKIISFHREDKNADPNNPQSILLDFISSCQN

Query:  LRIWSLNTTTREYLNSEQLQKGKQIDEWWRQASKG
        LRIWSLNT TREYLN+EQLQKGKQIDEWWRQASKG
Subjt:  LRIWSLNTTTREYLNSEQLQKGKQIDEWWRQASKG

XP_038875594.1 mediator of RNA polymerase II transcription subunit 23 [Benincasa hispida]

0.0e+00

98.11

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Query:  MDQSQRSSSLTAVSTSRAYQFHPARAAIVNLFDLYLGRSNRLKHEDSAREPPNKAQKRVLAINRELPPRNEQFLLDFEQIQNQFSDHDQLRAVTESVLIS
        MDQSQRSSSLTAVSTSRAYQFHPARAAIVNLFDLYLGRSNRLK EDSAREPPNKAQKRVLAINRELPPRNEQFLLDFEQIQNQF+DHDQLRAVTESVLIS
Subjt:  MDQSQRSSSLTAVSTSRAYQFHPARAAIVNLFDLYLGRSNRLKHEDSAREPPNKAQKRVLAINRELPPRNEQFLLDFEQIQNQFSDHDQLRAVTESVLIS

Query:  LVVQCSGHVPRAEFLLFALRSLCSISYINWDTFLPSLLSSISSAEVSMGQGSQAAPTVSTTNLSQSGVLPSSNPVPNSSTFQSSNPASPLPSVHGISSPA
        LVVQCSGHVPRAEFLLFALRSLCSI YINWDTFLPSLLSS+SSAEVS+GQGSQAA TVSTTNLSQSGVLPSSNPVPNSSTFQSSNPASP PSVHGISSPA
Subjt:  LVVQCSGHVPRAEFLLFALRSLCSISYINWDTFLPSLLSSISSAEVSMGQGSQAAPTVSTTNLSQSGVLPSSNPVPNSSTFQSSNPASPLPSVHGISSPA

Query:  QSSIDPSSCTALSPIKSSDLSGTGLPSAVRVNSFLRNNAISSLRQLCCKIILSGLKFDLKPVTHADIFSHMLNWMVNWDQRQQGMEESENMKSWRPDKAL
        QSSIDPSSCTALSPIKSSDLSGTGLPSAVRVNSFLRNNAISSLRQLCCKIILSGLKFDLKPVTHADIFSHMLNWMVNWDQRQQGMEESENMKSWRPDKAL
Subjt:  QSSIDPSSCTALSPIKSSDLSGTGLPSAVRVNSFLRNNAISSLRQLCCKIILSGLKFDLKPVTHADIFSHMLNWMVNWDQRQQGMEESENMKSWRPDKAL

Query:  IEWLHSCLDVVWLLVEENKCRVPFYELLRSGLQFIDNIPDDEALFTLILEIHRRRDMMAMHMQMLDQHLHSPTFGTQRIFSQTMQNISGEAVASLRYSPI
        IEWLHSCLDVVWLLVEENKCRVPFYELLRSGLQFIDNIPDDEALFTLILEIHRRRDMMAMHMQMLDQHLHSPTFGTQRIFSQTMQNISGEAVASLRYSPI
Subjt:  IEWLHSCLDVVWLLVEENKCRVPFYELLRSGLQFIDNIPDDEALFTLILEIHRRRDMMAMHMQMLDQHLHSPTFGTQRIFSQTMQNISGEAVASLRYSPI

Query:  TYPSVLGEPLHGEDIASAIQRGTRDWERAMRCIRHALRTTPSPDWWKRVLLVAPGYRSSAQGLSPGAVFTSEMICEATIDRIFELLKLTNSEIHCWQEWL
        TYPSVLGEPLHGEDIASAIQRGTRDWERAMRCIRHALRTTPSPDWWKRVLLVAPGYRS AQGLSPGAVFTSEMICEATIDRIFELLKLTNSEIHCWQEWL
Subjt:  TYPSVLGEPLHGEDIASAIQRGTRDWERAMRCIRHALRTTPSPDWWKRVLLVAPGYRSSAQGLSPGAVFTSEMICEATIDRIFELLKLTNSEIHCWQEWL

Query:  VFSDIFFFLMKSGCIDFADFVAKLFSRVTEGGQHVLRTNHVTWLFAQIIRVELVMSALNSDARKVETTRKIISFHREDKNADPNNPQSILLDFISSCQNL
        VFSDIFFFLMKSGCIDFADFVAKLFSRVTEGG HVLRTNHVTWLFAQIIRVELVMSALNSDARKVETTRKIISFHREDK+ADPNNPQSILLDFISSCQNL
Subjt:  VFSDIFFFLMKSGCIDFADFVAKLFSRVTEGGQHVLRTNHVTWLFAQIIRVELVMSALNSDARKVETTRKIISFHREDKNADPNNPQSILLDFISSCQNL

Query:  RIWSLNTTTREYLNSEQLQKGKQIDEWWRQASKG
        R+WSLNTTTREYLNSEQLQKGKQIDEWWR ASKG
Subjt:  RIWSLNTTTREYLNSEQLQKGKQIDEWWRQASKG

TrEMBL top hits

e value

%identity

Alignment

A0A1S3CSR7 mediator of RNA polymerase II transcription subunit 23 isoform X1

0.0e+00

100

Show/hide

Query:  MDQSQRSSSLTAVSTSRAYQFHPARAAIVNLFDLYLGRSNRLKHEDSAREPPNKAQKRVLAINRELPPRNEQFLLDFEQIQNQFSDHDQLRAVTESVLIS
        MDQSQRSSSLTAVSTSRAYQFHPARAAIVNLFDLYLGRSNRLKHEDSAREPPNKAQKRVLAINRELPPRNEQFLLDFEQIQNQFSDHDQLRAVTESVLIS
Subjt:  MDQSQRSSSLTAVSTSRAYQFHPARAAIVNLFDLYLGRSNRLKHEDSAREPPNKAQKRVLAINRELPPRNEQFLLDFEQIQNQFSDHDQLRAVTESVLIS

Query:  LVVQCSGHVPRAEFLLFALRSLCSISYINWDTFLPSLLSSISSAEVSMGQGSQAAPTVSTTNLSQSGVLPSSNPVPNSSTFQSSNPASPLPSVHGISSPA
        LVVQCSGHVPRAEFLLFALRSLCSISYINWDTFLPSLLSSISSAEVSMGQGSQAAPTVSTTNLSQSGVLPSSNPVPNSSTFQSSNPASPLPSVHGISSPA
Subjt:  LVVQCSGHVPRAEFLLFALRSLCSISYINWDTFLPSLLSSISSAEVSMGQGSQAAPTVSTTNLSQSGVLPSSNPVPNSSTFQSSNPASPLPSVHGISSPA

Query:  QSSIDPSSCTALSPIKSSDLSGTGLPSAVRVNSFLRNNAISSLRQLCCKIILSGLKFDLKPVTHADIFSHMLNWMVNWDQRQQGMEESENMKSWRPDKAL
        QSSIDPSSCTALSPIKSSDLSGTGLPSAVRVNSFLRNNAISSLRQLCCKIILSGLKFDLKPVTHADIFSHMLNWMVNWDQRQQGMEESENMKSWRPDKAL
Subjt:  QSSIDPSSCTALSPIKSSDLSGTGLPSAVRVNSFLRNNAISSLRQLCCKIILSGLKFDLKPVTHADIFSHMLNWMVNWDQRQQGMEESENMKSWRPDKAL

Query:  IEWLHSCLDVVWLLVEENKCRVPFYELLRSGLQFIDNIPDDEALFTLILEIHRRRDMMAMHMQMLDQHLHSPTFGTQRIFSQTMQNISGEAVASLRYSPI
        IEWLHSCLDVVWLLVEENKCRVPFYELLRSGLQFIDNIPDDEALFTLILEIHRRRDMMAMHMQMLDQHLHSPTFGTQRIFSQTMQNISGEAVASLRYSPI
Subjt:  IEWLHSCLDVVWLLVEENKCRVPFYELLRSGLQFIDNIPDDEALFTLILEIHRRRDMMAMHMQMLDQHLHSPTFGTQRIFSQTMQNISGEAVASLRYSPI

Query:  TYPSVLGEPLHGEDIASAIQRGTRDWERAMRCIRHALRTTPSPDWWKRVLLVAPGYRSSAQGLSPGAVFTSEMICEATIDRIFELLKLTNSEIHCWQEWL
        TYPSVLGEPLHGEDIASAIQRGTRDWERAMRCIRHALRTTPSPDWWKRVLLVAPGYRSSAQGLSPGAVFTSEMICEATIDRIFELLKLTNSEIHCWQEWL
Subjt:  TYPSVLGEPLHGEDIASAIQRGTRDWERAMRCIRHALRTTPSPDWWKRVLLVAPGYRSSAQGLSPGAVFTSEMICEATIDRIFELLKLTNSEIHCWQEWL

Query:  VFSDIFFFLMKSGCIDFADFVAKLFSRVTEGGQHVLRTNHVTWLFAQIIRVELVMSALNSDARKVETTRKIISFHREDKNADPNNPQSILLDFISSCQNL
        VFSDIFFFLMKSGCIDFADFVAKLFSRVTEGGQHVLRTNHVTWLFAQIIRVELVMSALNSDARKVETTRKIISFHREDKNADPNNPQSILLDFISSCQNL
Subjt:  VFSDIFFFLMKSGCIDFADFVAKLFSRVTEGGQHVLRTNHVTWLFAQIIRVELVMSALNSDARKVETTRKIISFHREDKNADPNNPQSILLDFISSCQNL

Query:  RIWSLNTTTREYLNSEQLQKGKQIDEWWRQASKG
        RIWSLNTTTREYLNSEQLQKGKQIDEWWRQASKG
Subjt:  RIWSLNTTTREYLNSEQLQKGKQIDEWWRQASKG

A0A5A7TSF1 Mediator of RNA polymerase II transcription subunit 23 isoform X1

0.0e+00

100

Show/hide

Query:  MDQSQRSSSLTAVSTSRAYQFHPARAAIVNLFDLYLGRSNRLKHEDSAREPPNKAQKRVLAINRELPPRNEQFLLDFEQIQNQFSDHDQLRAVTESVLIS
        MDQSQRSSSLTAVSTSRAYQFHPARAAIVNLFDLYLGRSNRLKHEDSAREPPNKAQKRVLAINRELPPRNEQFLLDFEQIQNQFSDHDQLRAVTESVLIS
Subjt:  MDQSQRSSSLTAVSTSRAYQFHPARAAIVNLFDLYLGRSNRLKHEDSAREPPNKAQKRVLAINRELPPRNEQFLLDFEQIQNQFSDHDQLRAVTESVLIS

Query:  LVVQCSGHVPRAEFLLFALRSLCSISYINWDTFLPSLLSSISSAEVSMGQGSQAAPTVSTTNLSQSGVLPSSNPVPNSSTFQSSNPASPLPSVHGISSPA
        LVVQCSGHVPRAEFLLFALRSLCSISYINWDTFLPSLLSSISSAEVSMGQGSQAAPTVSTTNLSQSGVLPSSNPVPNSSTFQSSNPASPLPSVHGISSPA
Subjt:  LVVQCSGHVPRAEFLLFALRSLCSISYINWDTFLPSLLSSISSAEVSMGQGSQAAPTVSTTNLSQSGVLPSSNPVPNSSTFQSSNPASPLPSVHGISSPA

Query:  QSSIDPSSCTALSPIKSSDLSGTGLPSAVRVNSFLRNNAISSLRQLCCKIILSGLKFDLKPVTHADIFSHMLNWMVNWDQRQQGMEESENMKSWRPDKAL
        QSSIDPSSCTALSPIKSSDLSGTGLPSAVRVNSFLRNNAISSLRQLCCKIILSGLKFDLKPVTHADIFSHMLNWMVNWDQRQQGMEESENMKSWRPDKAL
Subjt:  QSSIDPSSCTALSPIKSSDLSGTGLPSAVRVNSFLRNNAISSLRQLCCKIILSGLKFDLKPVTHADIFSHMLNWMVNWDQRQQGMEESENMKSWRPDKAL

Query:  IEWLHSCLDVVWLLVEENKCRVPFYELLRSGLQFIDNIPDDEALFTLILEIHRRRDMMAMHMQMLDQHLHSPTFGTQRIFSQTMQNISGEAVASLRYSPI
        IEWLHSCLDVVWLLVEENKCRVPFYELLRSGLQFIDNIPDDEALFTLILEIHRRRDMMAMHMQMLDQHLHSPTFGTQRIFSQTMQNISGEAVASLRYSPI
Subjt:  IEWLHSCLDVVWLLVEENKCRVPFYELLRSGLQFIDNIPDDEALFTLILEIHRRRDMMAMHMQMLDQHLHSPTFGTQRIFSQTMQNISGEAVASLRYSPI

Query:  TYPSVLGEPLHGEDIASAIQRGTRDWERAMRCIRHALRTTPSPDWWKRVLLVAPGYRSSAQGLSPGAVFTSEMICEATIDRIFELLKLTNSEIHCWQEWL
        TYPSVLGEPLHGEDIASAIQRGTRDWERAMRCIRHALRTTPSPDWWKRVLLVAPGYRSSAQGLSPGAVFTSEMICEATIDRIFELLKLTNSEIHCWQEWL
Subjt:  TYPSVLGEPLHGEDIASAIQRGTRDWERAMRCIRHALRTTPSPDWWKRVLLVAPGYRSSAQGLSPGAVFTSEMICEATIDRIFELLKLTNSEIHCWQEWL

Query:  VFSDIFFFLMKSGCIDFADFVAKLFSRVTEGGQHVLRTNHVTWLFAQIIRVELVMSALNSDARKVETTRKIISFHREDKNADPNNPQSILLDFISSCQNL
        VFSDIFFFLMKSGCIDFADFVAKLFSRVTEGGQHVLRTNHVTWLFAQIIRVELVMSALNSDARKVETTRKIISFHREDKNADPNNPQSILLDFISSCQNL
Subjt:  VFSDIFFFLMKSGCIDFADFVAKLFSRVTEGGQHVLRTNHVTWLFAQIIRVELVMSALNSDARKVETTRKIISFHREDKNADPNNPQSILLDFISSCQNL

Query:  RIWSLNTTTREYLNSEQLQKGKQIDEWWRQASKG
        RIWSLNTTTREYLNSEQLQKGKQIDEWWRQASKG
Subjt:  RIWSLNTTTREYLNSEQLQKGKQIDEWWRQASKG

A0A6J1CXU7 mediator of RNA polymerase II transcription subunit 23

0.0e+00

92.11

Show/hide

Query:  MDQSQRSSSLTAVSTSRAYQFHPARAAIVNLFDLYLGRSNRLKHEDSAREPPNKAQKRVLAINRELPPRNEQFLLDFEQIQNQFSDHDQLRAVTESVLIS
        MDQ QR+ S +AVSTSRAYQFHPARAAIVNLFDLYLGRSNR K EDS+REPPNKAQKRVLAINRELPPRNEQFLLDFEQ+QNQF+DHDQLRAVTESVLIS
Subjt:  MDQSQRSSSLTAVSTSRAYQFHPARAAIVNLFDLYLGRSNRLKHEDSAREPPNKAQKRVLAINRELPPRNEQFLLDFEQIQNQFSDHDQLRAVTESVLIS

Query:  LVVQCSGHVPRAEFLLFALRSLCSISYINWDTFLPSLLSSISSAEVSMGQGSQAAPTVSTTNLSQSGVLPSSNPVPNSSTFQSSNPASPLPSVHGISSPA
        LVVQCSGHVPRAEFLLF+LRSLCSI YINWDTFLPSLLSS+SSAEVS+GQG+QA PTVS+TNLSQS VLP SNPVPNSSTFQSSNPASPLPSVHGISSPA
Subjt:  LVVQCSGHVPRAEFLLFALRSLCSISYINWDTFLPSLLSSISSAEVSMGQGSQAAPTVSTTNLSQSGVLPSSNPVPNSSTFQSSNPASPLPSVHGISSPA

Query:  QSSIDPSSCTALSPIKSSDLSGTGLPSAVRVNSFLRNNAISSLRQLCCKIILSGLKFDLKPVTHADIFSHMLNWMVNWDQRQQGMEESENMKSWRPDKAL
        QSSIDPSSCTALSPIKSSDLSG GL SAVR+NSF RNNAISSLRQLCCKIILSGL+F+LKP THADIFSHMLNWMVNWDQRQQG+EESE+M SWRPDKAL
Subjt:  QSSIDPSSCTALSPIKSSDLSGTGLPSAVRVNSFLRNNAISSLRQLCCKIILSGLKFDLKPVTHADIFSHMLNWMVNWDQRQQGMEESENMKSWRPDKAL

Query:  IEWLHSCLDVVWLLVEENKCRVPFYELLRSGLQFIDNIPDDEALFTLILEIHRRRDMMAMHMQMLDQHLHSPTFGTQRIFSQTMQNISGEAVASLRYSPI
        IEWLHSCLDVVWLLVEENKCRVPFYELLRSGLQFIDNIPDDEALFTLILEIHRRRDMMAMHMQMLDQHLH PTFGTQRIFSQTM NISGEAVASLRYSPI
Subjt:  IEWLHSCLDVVWLLVEENKCRVPFYELLRSGLQFIDNIPDDEALFTLILEIHRRRDMMAMHMQMLDQHLHSPTFGTQRIFSQTMQNISGEAVASLRYSPI

Query:  TYPSVLGEPLHGEDIASAIQRGTRDWERAMRCIRHALRTTPSPDWWKRVLLVAPGYRSSAQGLSPGAVFTSEMICEATIDRIFELLKLTNSEIHCWQEWL
        TYPSVLGEPLHGED+AS IQRGTRDWERAMRCIRHALRTTPSPDWWKRVLLVAP YRS +QG +PGAVFTSEMICEATIDRIFELLKLTNSEIHCWQEWL
Subjt:  TYPSVLGEPLHGEDIASAIQRGTRDWERAMRCIRHALRTTPSPDWWKRVLLVAPGYRSSAQGLSPGAVFTSEMICEATIDRIFELLKLTNSEIHCWQEWL

Query:  VFSDIFFFLMKSGCIDFADFVAKLFSRVTEGGQHVLRTNHVTWLFAQIIRVELVMSALNSDARKVETTRKIISFHREDKNADPNNPQSILLDFISSCQNL
        VFSDIF+FLMKSGCIDF DFVAKLFSRV EGG HVLRTNHVTWLFAQIIRVE+V++ALNSDARKVETTRK++SFHREDK+ADPNNPQSILLDFISSCQNL
Subjt:  VFSDIFFFLMKSGCIDFADFVAKLFSRVTEGGQHVLRTNHVTWLFAQIIRVELVMSALNSDARKVETTRKIISFHREDKNADPNNPQSILLDFISSCQNL

Query:  RIWSLNTTTREYLNSEQLQKGKQIDEWWRQASKG
        RIWSLNT TREYLN+EQLQKGKQIDEWWRQASKG
Subjt:  RIWSLNTTTREYLNSEQLQKGKQIDEWWRQASKG

A0A6J1FDL6 mediator of RNA polymerase II transcription subunit 23

0.0e+00

95.91

Show/hide

Query:  MDQSQRSSSLTAVSTSRAYQFHPARAAIVNLFDLYLGRSNRLKHEDSAREPPNKAQKRVLAINRELPPRNEQFLLDFEQIQNQFSDHDQLRAVTESVLIS
        MDQ QRSSS+TAVSTSRAYQFHPARAAI NLFDLYLGRSNRLK EDSAREPPNKAQKRV+AINRELPPRNEQFLLDFEQIQNQF+D+DQL AVTESVLIS
Subjt:  MDQSQRSSSLTAVSTSRAYQFHPARAAIVNLFDLYLGRSNRLKHEDSAREPPNKAQKRVLAINRELPPRNEQFLLDFEQIQNQFSDHDQLRAVTESVLIS

Query:  LVVQCSGHVPRAEFLLFALRSLCSISYINWDTFLPSLLSSISSAEVSMGQGSQAAP-TVSTTNLSQSGVLPSSNPVPNSSTFQSSNPASPLPSVHGISSP
        LVVQCSGHVPRAEFLLFALRSLCSI YINWDTFLPSLLSSISSAEVS+GQGSQAAP TVSTTNLSQSGVLPSSNPVPNSSTFQSSNPASPLPSVHGISSP
Subjt:  LVVQCSGHVPRAEFLLFALRSLCSISYINWDTFLPSLLSSISSAEVSMGQGSQAAP-TVSTTNLSQSGVLPSSNPVPNSSTFQSSNPASPLPSVHGISSP

Query:  AQSSIDPSSCTALSPIKSSDLSGTGLPSAVRVNSFLRNNAISSLRQLCCKIILSGLKFDLKPVTHADIFSHMLNWMVNWDQRQQGMEESENMKSWRPDKA
        AQSSIDP+SCTALSPIKSSDLSGTGLPSAVRVNSFLRNNAISSLRQLCCKIILSGLKFDLKPVT ADIFSHMLNWMVNWDQRQQG+EESENMKSWRPDKA
Subjt:  AQSSIDPSSCTALSPIKSSDLSGTGLPSAVRVNSFLRNNAISSLRQLCCKIILSGLKFDLKPVTHADIFSHMLNWMVNWDQRQQGMEESENMKSWRPDKA

Query:  LIEWLHSCLDVVWLLVEENKCRVPFYELLRSGLQFIDNIPDDEALFTLILEIHRRRDMMAMHMQMLDQHLHSPTFGTQRIFSQTMQNISGEAVASLRYSP
        LIEWLHSCLDVVWLLVEENKCRVPFYELLRSGLQFIDNIPDDEALFTLILEIHRRRDMMAMHMQMLDQHLH PTFGTQRIFSQTMQNISGEAVAS R+SP
Subjt:  LIEWLHSCLDVVWLLVEENKCRVPFYELLRSGLQFIDNIPDDEALFTLILEIHRRRDMMAMHMQMLDQHLHSPTFGTQRIFSQTMQNISGEAVASLRYSP

Query:  ITYPSVLGEPLHGEDIASAIQRGTRDWERAMRCIRHALRTTPSPDWWKRVLLVAPGYRSSAQGLSPGAVFTSEMICEATIDRIFELLKLTNSEIHCWQEW
        ITYPSVLGEPLHGEDIASAIQRGTRDWERAMRCIRHALRTTPSP+WWKRVLLVAPGYRS AQGLSPGAVFTSEMICEATIDRIFELLKLTNSEIHCWQEW
Subjt:  ITYPSVLGEPLHGEDIASAIQRGTRDWERAMRCIRHALRTTPSPDWWKRVLLVAPGYRSSAQGLSPGAVFTSEMICEATIDRIFELLKLTNSEIHCWQEW

Query:  LVFSDIFFFLMKSGCIDFADFVAKLFSRVTEGGQHVLRTNHVTWLFAQIIRVELVMSALNSDARKVETTRKIISFHREDKNADPNNPQSILLDFISSCQN
        LVFSDIF+FLMKSGCIDFADFVAKLFSRVTEGG HVLRTNHVTWLFAQIIRVELVMSALNSDARKVETTRKI+SFHREDK+ADPNNPQSILLDFISSCQN
Subjt:  LVFSDIFFFLMKSGCIDFADFVAKLFSRVTEGGQHVLRTNHVTWLFAQIIRVELVMSALNSDARKVETTRKIISFHREDKNADPNNPQSILLDFISSCQN

Query:  LRIWSLNTTTREYLNSEQLQKGKQIDEWWRQASKG
        LRIWSLNT TREYLN+EQLQKGKQIDEWWRQA KG
Subjt:  LRIWSLNTTTREYLNSEQLQKGKQIDEWWRQASKG

A0A6J1I8Y2 mediator of RNA polymerase II transcription subunit 23

0.0e+00

96.22

Show/hide

Query:  MDQSQRSSSLTAVSTSRAYQFHPARAAIVNLFDLYLGRSNRLKHEDSAREPPNKAQKRVLAINRELPPRNEQFLLDFEQIQNQFSDHDQLRAVTESVLIS
        MDQ QRSSS+TAVSTSRAYQFHPARAAI NLFDLYLGRSNRLK EDSAREPPNKAQKRVLAINRELPPRNEQFLLDFEQIQNQF+D+DQL AVTESVLIS
Subjt:  MDQSQRSSSLTAVSTSRAYQFHPARAAIVNLFDLYLGRSNRLKHEDSAREPPNKAQKRVLAINRELPPRNEQFLLDFEQIQNQFSDHDQLRAVTESVLIS

Query:  LVVQCSGHVPRAEFLLFALRSLCSISYINWDTFLPSLLSSISSAEVSMGQGSQAAP-TVSTTNLSQSGVLPSSNPVPNSSTFQSSNPASPLPSVHGISSP
        LVVQCSGHVPRAEFLLFALRSLCSI YINWDTFLPSLLSSISSAEVS+GQGSQAAP TVSTTNLSQSGVLPSSNPVPNSSTFQSSNPASPLPS+HGISSP
Subjt:  LVVQCSGHVPRAEFLLFALRSLCSISYINWDTFLPSLLSSISSAEVSMGQGSQAAP-TVSTTNLSQSGVLPSSNPVPNSSTFQSSNPASPLPSVHGISSP

Query:  AQSSIDPSSCTALSPIKSSDLSGTGLPSAVRVNSFLRNNAISSLRQLCCKIILSGLKFDLKPVTHADIFSHMLNWMVNWDQRQQGMEESENMKSWRPDKA
        AQSSIDP+SCTALSPIKSSDLSGTGLPSAVRVNSFLRNNAISSLRQLCCKIILSGLKFDLKPVT ADIFSHMLNWMVNWDQRQQG+EESENMKSWRPDKA
Subjt:  AQSSIDPSSCTALSPIKSSDLSGTGLPSAVRVNSFLRNNAISSLRQLCCKIILSGLKFDLKPVTHADIFSHMLNWMVNWDQRQQGMEESENMKSWRPDKA

Query:  LIEWLHSCLDVVWLLVEENKCRVPFYELLRSGLQFIDNIPDDEALFTLILEIHRRRDMMAMHMQMLDQHLHSPTFGTQRIFSQTMQNISGEAVASLRYSP
        LIEWLHSCLDVVWLLVEENKCRVPFYELLRSGLQFIDNIPDDEALFTLILEIHRRRDMMAMHMQMLDQHLH PTFGTQRIFSQTMQNISGEAVAS R+SP
Subjt:  LIEWLHSCLDVVWLLVEENKCRVPFYELLRSGLQFIDNIPDDEALFTLILEIHRRRDMMAMHMQMLDQHLHSPTFGTQRIFSQTMQNISGEAVASLRYSP

Query:  ITYPSVLGEPLHGEDIASAIQRGTRDWERAMRCIRHALRTTPSPDWWKRVLLVAPGYRSSAQGLSPGAVFTSEMICEATIDRIFELLKLTNSEIHCWQEW
        ITYPSVLGEPLHGEDIASAIQRGTRDWERAMRCIRHALRTTPSP+WWKRVLLVAPGYRS AQGLSPGAVFTSEMICEATIDRIFELLKLTNSEIHCWQEW
Subjt:  ITYPSVLGEPLHGEDIASAIQRGTRDWERAMRCIRHALRTTPSPDWWKRVLLVAPGYRSSAQGLSPGAVFTSEMICEATIDRIFELLKLTNSEIHCWQEW

Query:  LVFSDIFFFLMKSGCIDFADFVAKLFSRVTEGGQHVLRTNHVTWLFAQIIRVELVMSALNSDARKVETTRKIISFHREDKNADPNNPQSILLDFISSCQN
        LVFSDIF+FLMKSGCIDFADFVAKLFSRVTEGG HVLRTNHVTWLFAQIIRVELVMSALNSDARKVETTRKI+SFHREDK+ADPNNPQSILLDFISSCQN
Subjt:  LVFSDIFFFLMKSGCIDFADFVAKLFSRVTEGGQHVLRTNHVTWLFAQIIRVELVMSALNSDARKVETTRKIISFHREDKNADPNNPQSILLDFISSCQN

Query:  LRIWSLNTTTREYLNSEQLQKGKQIDEWWRQASKG
        LRIWSLNTTTREYLN+EQLQKGKQIDEWWRQASKG
Subjt:  LRIWSLNTTTREYLNSEQLQKGKQIDEWWRQASKG

SwissProt top hits

e value

%identity

Alignment

F4I4P3 Mediator of RNA polymerase II transcription subunit 23

1.9e-238

65.96

Show/hide

Query:  MDQSQRSSSLTAVSTSRAYQFHPARAAIVNLFDLYLGRSNRLKHEDSAREPPNKAQKRVLAINRELPPRNEQFLLDFEQIQNQFSDHDQLRAVTESVLIS
        MDQSQR+ + T  S+SR+YQFHPARAAI++LF+LYLGR +R K ++S R+PPNK+QKRV A NR+LPPRNEQFLLDFE +Q+QF+D +QLR +TESVLIS
Subjt:  MDQSQRSSSLTAVSTSRAYQFHPARAAIVNLFDLYLGRSNRLKHEDSAREPPNKAQKRVLAINRELPPRNEQFLLDFEQIQNQFSDHDQLRAVTESVLIS

Query:  LVVQCSGHVPRAEFLLFALRSLCSISYINWDTFLPSLLSSISSAEVSMGQGSQ-AAPTVSTTNLSQSGVLPSSNPVPNSSTFQSSNPASPLPSVHGISSP
        LVVQCS H PRAEFLLFALR+LC ISYINWDTFLPSLLSS+S+AE S+ QG Q AA T  ++  S   V+P            S NP S LPS HGI SP
Subjt:  LVVQCSGHVPRAEFLLFALRSLCSISYINWDTFLPSLLSSISSAEVSMGQGSQ-AAPTVSTTNLSQSGVLPSSNPVPNSSTFQSSNPASPLPSVHGISSP

Query:  AQSSIDPSSCTALSPIKSSDLSGTG---LPSAVRVNSFLRNNAISSLRQLCCKIILSGLKFDLKPVTHADIFSHMLNWMVNWDQRQQGMEESENMKSWRP
        + S +        S      ++  G     +A+R +  +R  A++SLRQL CKIIL G++  LKPVTHA+IF +M+NW+VNWD+R  G E+S   KSWR 
Subjt:  AQSSIDPSSCTALSPIKSSDLSGTG---LPSAVRVNSFLRNNAISSLRQLCCKIILSGLKFDLKPVTHADIFSHMLNWMVNWDQRQQGMEESENMKSWRP

Query:  DKALIEWLHSCLDVVWLLVEENKCRVPFYELLRSGLQFIDNIPDDEALFTLILEIHRRRDMMAMHMQMLDQHLHSPTFGTQRIFSQTMQNISGEAVASLR
        +K L EWL SCLDV+WLLVEE + R+PFYELLRSGLQFI+NIPDDEALFTLI+EIHRRRD MAMHM MLDQHLH P+FGT RI SQ   N+  EAV  LR
Subjt:  DKALIEWLHSCLDVVWLLVEENKCRVPFYELLRSGLQFIDNIPDDEALFTLILEIHRRRDMMAMHMQMLDQHLHSPTFGTQRIFSQTMQNISGEAVASLR

Query:  YSPITYPSVLGEPLHGEDIASAIQRGTRDWERAMRCIRHALRTTPSPDWWKRVLLVAPGYRSSAQ-GLSPGAVFTSEMICEATIDRIFELLKLTNS----
        +SPITYPSVLGEPL+GED+A +I +G+ DWERA+RCIRHA+RTTPSPDWWKRVL+VAP YR S Q G  PGAVFTS+MICEA IDRI ELLKLTNS    
Subjt:  YSPITYPSVLGEPLHGEDIASAIQRGTRDWERAMRCIRHALRTTPSPDWWKRVLLVAPGYRSSAQ-GLSPGAVFTSEMICEATIDRIFELLKLTNS----

Query:  ---------------EIHCWQEWLVFSDIFFFLMKSGCIDFADFVAKLFSRVTEGGQHVLRTNHVTWLFAQIIRVELVMSALNSDARKVETTRKIISFHR
                       + +CWQEWLVFSDIFFFL+KSGC DF DF+ KL  R+     H+LRTNHVTWL AQIIRVELVM+ALNSDA+KVETTRKI+SFHR
Subjt:  ---------------EIHCWQEWLVFSDIFFFLMKSGCIDFADFVAKLFSRVTEGGQHVLRTNHVTWLFAQIIRVELVMSALNSDARKVETTRKIISFHR

Query:  EDKNADPNNPQSILLDFISSCQNLRIWSLNTTTREYLNSEQLQKGKQIDEWWRQASKG
        ED+N+DPNNPQS+LLDF+SSCQNLRIWSL+TTTR YLN+EQL KGKQIDEWWR  SKG
Subjt:  EDKNADPNNPQSILLDFISSCQNLRIWSLNTTTREYLNSEQLQKGKQIDEWWRQASKG

Q55BN0 Putative mediator of RNA polymerase II transcription subunit 23

8.4e-05

27.61

Show/hide

Query:  MICEATIDRIFELLKLTNSEI-------HCWQEWLVFSDIFFFLMKSGCIDFADFVAKLFSRVTEGGQHVLRTNHVTWLFAQIIRVELVMSALNSDARKV
        +I EATI +  +LL    ++I       + W+EWL+FS+ F+FL ++G +D   F+  L  +    G  + + N V  L ++ I ++ V +      + V
Subjt:  MICEATIDRIFELLKLTNSEI-------HCWQEWLVFSDIFFFLMKSGCIDFADFVAKLFSRVTEGGQHVLRTNHVTWLFAQIIRVELVMSALNSDARKV

Query:  ETTR------KIISFHREDKNADPNNPQSILLDF
         +         ++SF   D N  P   Q+I L F
Subjt:  ETTR------KIISFHREDKNADPNNPQSILLDF

Arabidopsis top hits

e value

%identity

Alignment

AT1G23230.1 CONTAINS InterPro DOMAIN/s: Mediator complex subunit Med23 (InterPro:IPR021629); Has 187 Blast hits to 184 proteins in 67 species: Archae - 0; Bacteria - 0; Metazoa - 135; Fungi - 0; Plants - 43; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink).

1.3e-239

65.96

Show/hide

Query:  MDQSQRSSSLTAVSTSRAYQFHPARAAIVNLFDLYLGRSNRLKHEDSAREPPNKAQKRVLAINRELPPRNEQFLLDFEQIQNQFSDHDQLRAVTESVLIS
        MDQSQR+ + T  S+SR+YQFHPARAAI++LF+LYLGR +R K ++S R+PPNK+QKRV A NR+LPPRNEQFLLDFE +Q+QF+D +QLR +TESVLIS
Subjt:  MDQSQRSSSLTAVSTSRAYQFHPARAAIVNLFDLYLGRSNRLKHEDSAREPPNKAQKRVLAINRELPPRNEQFLLDFEQIQNQFSDHDQLRAVTESVLIS

Query:  LVVQCSGHVPRAEFLLFALRSLCSISYINWDTFLPSLLSSISSAEVSMGQGSQ-AAPTVSTTNLSQSGVLPSSNPVPNSSTFQSSNPASPLPSVHGISSP
        LVVQCS H PRAEFLLFALR+LC ISYINWDTFLPSLLSS+S+AE S+ QG Q AA T  ++  S   V+P            S NP S LPS HGI SP
Subjt:  LVVQCSGHVPRAEFLLFALRSLCSISYINWDTFLPSLLSSISSAEVSMGQGSQ-AAPTVSTTNLSQSGVLPSSNPVPNSSTFQSSNPASPLPSVHGISSP

Query:  AQSSIDPSSCTALSPIKSSDLSGTG---LPSAVRVNSFLRNNAISSLRQLCCKIILSGLKFDLKPVTHADIFSHMLNWMVNWDQRQQGMEESENMKSWRP
        + S +        S      ++  G     +A+R +  +R  A++SLRQL CKIIL G++  LKPVTHA+IF +M+NW+VNWD+R  G E+S   KSWR 
Subjt:  AQSSIDPSSCTALSPIKSSDLSGTG---LPSAVRVNSFLRNNAISSLRQLCCKIILSGLKFDLKPVTHADIFSHMLNWMVNWDQRQQGMEESENMKSWRP

Query:  DKALIEWLHSCLDVVWLLVEENKCRVPFYELLRSGLQFIDNIPDDEALFTLILEIHRRRDMMAMHMQMLDQHLHSPTFGTQRIFSQTMQNISGEAVASLR
        +K L EWL SCLDV+WLLVEE + R+PFYELLRSGLQFI+NIPDDEALFTLI+EIHRRRD MAMHM MLDQHLH P+FGT RI SQ   N+  EAV  LR
Subjt:  DKALIEWLHSCLDVVWLLVEENKCRVPFYELLRSGLQFIDNIPDDEALFTLILEIHRRRDMMAMHMQMLDQHLHSPTFGTQRIFSQTMQNISGEAVASLR

Query:  YSPITYPSVLGEPLHGEDIASAIQRGTRDWERAMRCIRHALRTTPSPDWWKRVLLVAPGYRSSAQ-GLSPGAVFTSEMICEATIDRIFELLKLTNS----
        +SPITYPSVLGEPL+GED+A +I +G+ DWERA+RCIRHA+RTTPSPDWWKRVL+VAP YR S Q G  PGAVFTS+MICEA IDRI ELLKLTNS    
Subjt:  YSPITYPSVLGEPLHGEDIASAIQRGTRDWERAMRCIRHALRTTPSPDWWKRVLLVAPGYRSSAQ-GLSPGAVFTSEMICEATIDRIFELLKLTNS----

Query:  ---------------EIHCWQEWLVFSDIFFFLMKSGCIDFADFVAKLFSRVTEGGQHVLRTNHVTWLFAQIIRVELVMSALNSDARKVETTRKIISFHR
                       + +CWQEWLVFSDIFFFL+KSGC DF DF+ KL  R+     H+LRTNHVTWL AQIIRVELVM+ALNSDA+KVETTRKI+SFHR
Subjt:  ---------------EIHCWQEWLVFSDIFFFLMKSGCIDFADFVAKLFSRVTEGGQHVLRTNHVTWLFAQIIRVELVMSALNSDARKVETTRKIISFHR

Query:  EDKNADPNNPQSILLDFISSCQNLRIWSLNTTTREYLNSEQLQKGKQIDEWWRQASKG
        ED+N+DPNNPQS+LLDF+SSCQNLRIWSL+TTTR YLN+EQL KGKQIDEWWR  SKG
Subjt:  EDKNADPNNPQSILLDFISSCQNLRIWSLNTTTREYLNSEQLQKGKQIDEWWRQASKG

AT1G23230.2 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to salt stress; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mediator complex subunit Med23 (InterPro:IPR021629).

4.4e-243

67.92

Show/hide

Query:  MDQSQRSSSLTAVSTSRAYQFHPARAAIVNLFDLYLGRSNRLKHEDSAREPPNKAQKRVLAINRELPPRNEQFLLDFEQIQNQFSDHDQLRAVTESVLIS
        MDQSQR+ + T  S+SR+YQFHPARAAI++LF+LYLGR +R K ++S R+PPNK+QKRV A NR+LPPRNEQFLLDFE +Q+QF+D +QLR +TESVLIS
Subjt:  MDQSQRSSSLTAVSTSRAYQFHPARAAIVNLFDLYLGRSNRLKHEDSAREPPNKAQKRVLAINRELPPRNEQFLLDFEQIQNQFSDHDQLRAVTESVLIS

Query:  LVVQCSGHVPRAEFLLFALRSLCSISYINWDTFLPSLLSSISSAEVSMGQGSQ-AAPTVSTTNLSQSGVLPSSNPVPNSSTFQSSNPASPLPSVHGISSP
        LVVQCS H PRAEFLLFALR+LC ISYINWDTFLPSLLSS+S+AE S+ QG Q AA T  ++  S   V+P            S NP S LPS HGI SP
Subjt:  LVVQCSGHVPRAEFLLFALRSLCSISYINWDTFLPSLLSSISSAEVSMGQGSQ-AAPTVSTTNLSQSGVLPSSNPVPNSSTFQSSNPASPLPSVHGISSP

Query:  AQSSIDPSSCTALSPIKSSDLSGTG---LPSAVRVNSFLRNNAISSLRQLCCKIILSGLKFDLKPVTHADIFSHMLNWMVNWDQRQQGMEESENMKSWRP
        + S +        S      ++  G     +A+R +  +R  A++SLRQL CKIIL G++  LKPVTHA+IF +M+NW+VNWD+R  G E+S   KSWR 
Subjt:  AQSSIDPSSCTALSPIKSSDLSGTG---LPSAVRVNSFLRNNAISSLRQLCCKIILSGLKFDLKPVTHADIFSHMLNWMVNWDQRQQGMEESENMKSWRP

Query:  DKALIEWLHSCLDVVWLLVEENKCRVPFYELLRSGLQFIDNIPDDEALFTLILEIHRRRDMMAMHMQMLDQHLHSPTFGTQRIFSQTMQNISGEAVASLR
        +K L EWL SCLDV+WLLVEE + R+PFYELLRSGLQFI+NIPDDEALFTLI+EIHRRRD MAMHM MLDQHLH P+FGT RI SQ   N+  EAV  LR
Subjt:  DKALIEWLHSCLDVVWLLVEENKCRVPFYELLRSGLQFIDNIPDDEALFTLILEIHRRRDMMAMHMQMLDQHLHSPTFGTQRIFSQTMQNISGEAVASLR

Query:  YSPITYPSVLGEPLHGEDIASAIQRGTRDWERAMRCIRHALRTTPSPDWWKRVLLVAPGYRSSAQ-GLSPGAVFTSEMICEATIDRIFELLKLTNSEIHC
        +SPITYPSVLGEPL+GED+A +I +G+ DWERA+RCIRHA+RTTPSPDWWKRVL+VAP YR S Q G  PGAVFTS+MICEA IDRI ELLKLTNS+ +C
Subjt:  YSPITYPSVLGEPLHGEDIASAIQRGTRDWERAMRCIRHALRTTPSPDWWKRVLLVAPGYRSSAQ-GLSPGAVFTSEMICEATIDRIFELLKLTNSEIHC

Query:  WQEWLVFSDIFFFLMKSGCIDFADFVAKLFSRVTEGGQHVLRTNHVTWLFAQIIRVELVMSALNSDARKVETTRKIISFHREDKNADPNNPQSILLDFIS
        WQEWLVFSDIFFFL+KSGC DF DF+ KL  R+     H+LRTNHVTWL AQIIRVELVM+ALNSDA+KVETTRKI+SFHRED+N+DPNNPQS+LLDF+S
Subjt:  WQEWLVFSDIFFFLMKSGCIDFADFVAKLFSRVTEGGQHVLRTNHVTWLFAQIIRVELVMSALNSDARKVETTRKIISFHREDKNADPNNPQSILLDFIS

Query:  SCQNLRIWSLNTTTREYLNSEQLQKGKQIDEWWRQASKG
        SCQNLRIWSL+TTTR YLN+EQL KGKQIDEWWR  SKG
Subjt:  SCQNLRIWSLNTTTREYLNSEQLQKGKQIDEWWRQASKG

Sequences

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CDS sequence

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ATGGATCAATCACAACGATCCTCATCACTAACGGCAGTCTCCACTTCCCGTGCTTACCAGTTCCATCCAGCTCGAGCTGCCATTGTCAATCTTTTCGACCTCTACTTAGG
AAGGAGTAATCGTCTAAAGCATGAAGATTCAGCTAGAGAACCTCCGAACAAGGCTCAAAAGCGTGTACTAGCTATTAACAGAGAGCTTCCTCCTCGAAATGAGCAGTTCC
TTTTAGATTTTGAGCAAATTCAGAATCAATTTTCAGACCATGATCAGTTGCGTGCTGTGACTGAGTCAGTTCTCATCTCCCTAGTTGTGCAGTGCAGTGGTCATGTACCA
AGGGCAGAATTTCTTCTCTTTGCTTTACGAAGTTTATGCAGTATAAGTTACATCAATTGGGACACTTTTCTGCCATCCCTTCTTTCTTCAATCTCATCTGCAGAAGTTTC
CATGGGTCAGGGAAGTCAAGCTGCGCCTACTGTCTCAACAACAAATTTATCACAGTCTGGGGTGCTTCCATCCTCAAACCCAGTGCCTAATAGTTCTACCTTTCAGTCTT
CCAATCCTGCCTCTCCATTACCATCGGTTCATGGAATCAGTTCACCTGCTCAGTCTAGTATTGATCCATCTTCTTGCACAGCATTGTCACCAATCAAATCCTCTGATCTT
TCTGGGACTGGATTACCATCTGCAGTTAGGGTCAATTCGTTTTTGAGAAATAATGCAATAAGCAGTCTTCGTCAGCTTTGTTGCAAGATTATCTTAAGTGGTCTTAAATT
TGATTTGAAACCAGTGACTCATGCTGATATCTTTTCCCACATGCTCAATTGGATGGTTAATTGGGACCAACGGCAACAGGGGATGGAGGAATCTGAGAATATGAAATCCT
GGAGGCCTGACAAGGCTCTCATTGAATGGCTACATAGCTGTTTGGATGTAGTCTGGCTTTTGGTTGAGGAGAATAAATGTCGGGTGCCCTTCTATGAATTACTACGCAGT
GGTTTGCAATTCATAGATAACATTCCTGATGATGAAGCCTTATTTACACTCATCTTGGAGATCCATAGGAGGCGAGATATGATGGCAATGCACATGCAGATGTTGGATCA
ACACCTTCACAGCCCTACATTTGGCACTCAACGGATTTTTTCTCAAACAATGCAGAACATATCTGGTGAAGCAGTAGCAAGCTTGCGCTATTCACCAATCACATACCCAA
GTGTTCTTGGTGAACCTCTTCATGGCGAGGATATTGCATCTGCTATTCAGAGAGGAACTCGAGATTGGGAAAGAGCTATGCGTTGTATAAGGCATGCTCTTCGCACAACT
CCATCACCGGACTGGTGGAAGCGTGTGCTTCTTGTGGCTCCTGGCTATAGGTCTTCTGCACAAGGACTCAGTCCTGGTGCAGTTTTTACATCCGAGATGATATGTGAGGC
GACAATTGATAGAATATTTGAGCTTTTGAAGTTGACGAATTCAGAGATACATTGCTGGCAAGAGTGGCTTGTTTTCTCGGATATATTCTTTTTTCTGATGAAAAGTGGAT
GTATCGATTTTGCGGACTTTGTGGCTAAGCTGTTCTCTCGCGTTACAGAGGGAGGTCAACATGTTTTAAGGACAAATCATGTCACTTGGTTGTTTGCACAAATCATCCGG
GTTGAACTTGTGATGAGTGCTTTGAATTCAGATGCAAGGAAGGTGGAGACTACAAGAAAAATAATATCATTTCATAGAGAAGATAAAAATGCTGATCCAAATAATCCTCA
AAGCATCCTGCTTGATTTTATTAGCAGTTGTCAGAACTTGCGTATTTGGTCACTAAATACAACAACAAGAGAATATTTGAATAGTGAGCAGCTACAGAAAGGAAAACAAA
TTGATGAATGGTGGAGACAAGCAAGTAAAGGATGA

mRNA sequence

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CTACGACTCAAAAATACGAACGCTGCCAAATTCTGGTTCTTCAGTTCGTTGATTACGGTTTCAAGTCCTGTGATTCTTCTTGAAATTCCAAGGGCTTGAGCTGTTGGAAC
TGGGAATGAGAAGATGGATCAATCACAACGATCCTCATCACTAACGGCAGTCTCCACTTCCCGTGCTTACCAGTTCCATCCAGCTCGAGCTGCCATTGTCAATCTTTTCG
ACCTCTACTTAGGAAGGAGTAATCGTCTAAAGCATGAAGATTCAGCTAGAGAACCTCCGAACAAGGCTCAAAAGCGTGTACTAGCTATTAACAGAGAGCTTCCTCCTCGA
AATGAGCAGTTCCTTTTAGATTTTGAGCAAATTCAGAATCAATTTTCAGACCATGATCAGTTGCGTGCTGTGACTGAGTCAGTTCTCATCTCCCTAGTTGTGCAGTGCAG
TGGTCATGTACCAAGGGCAGAATTTCTTCTCTTTGCTTTACGAAGTTTATGCAGTATAAGTTACATCAATTGGGACACTTTTCTGCCATCCCTTCTTTCTTCAATCTCAT
CTGCAGAAGTTTCCATGGGTCAGGGAAGTCAAGCTGCGCCTACTGTCTCAACAACAAATTTATCACAGTCTGGGGTGCTTCCATCCTCAAACCCAGTGCCTAATAGTTCT
ACCTTTCAGTCTTCCAATCCTGCCTCTCCATTACCATCGGTTCATGGAATCAGTTCACCTGCTCAGTCTAGTATTGATCCATCTTCTTGCACAGCATTGTCACCAATCAA
ATCCTCTGATCTTTCTGGGACTGGATTACCATCTGCAGTTAGGGTCAATTCGTTTTTGAGAAATAATGCAATAAGCAGTCTTCGTCAGCTTTGTTGCAAGATTATCTTAA
GTGGTCTTAAATTTGATTTGAAACCAGTGACTCATGCTGATATCTTTTCCCACATGCTCAATTGGATGGTTAATTGGGACCAACGGCAACAGGGGATGGAGGAATCTGAG
AATATGAAATCCTGGAGGCCTGACAAGGCTCTCATTGAATGGCTACATAGCTGTTTGGATGTAGTCTGGCTTTTGGTTGAGGAGAATAAATGTCGGGTGCCCTTCTATGA
ATTACTACGCAGTGGTTTGCAATTCATAGATAACATTCCTGATGATGAAGCCTTATTTACACTCATCTTGGAGATCCATAGGAGGCGAGATATGATGGCAATGCACATGC
AGATGTTGGATCAACACCTTCACAGCCCTACATTTGGCACTCAACGGATTTTTTCTCAAACAATGCAGAACATATCTGGTGAAGCAGTAGCAAGCTTGCGCTATTCACCA
ATCACATACCCAAGTGTTCTTGGTGAACCTCTTCATGGCGAGGATATTGCATCTGCTATTCAGAGAGGAACTCGAGATTGGGAAAGAGCTATGCGTTGTATAAGGCATGC
TCTTCGCACAACTCCATCACCGGACTGGTGGAAGCGTGTGCTTCTTGTGGCTCCTGGCTATAGGTCTTCTGCACAAGGACTCAGTCCTGGTGCAGTTTTTACATCCGAGA
TGATATGTGAGGCGACAATTGATAGAATATTTGAGCTTTTGAAGTTGACGAATTCAGAGATACATTGCTGGCAAGAGTGGCTTGTTTTCTCGGATATATTCTTTTTTCTG
ATGAAAAGTGGATGTATCGATTTTGCGGACTTTGTGGCTAAGCTGTTCTCTCGCGTTACAGAGGGAGGTCAACATGTTTTAAGGACAAATCATGTCACTTGGTTGTTTGC
ACAAATCATCCGGGTTGAACTTGTGATGAGTGCTTTGAATTCAGATGCAAGGAAGGTGGAGACTACAAGAAAAATAATATCATTTCATAGAGAAGATAAAAATGCTGATC
CAAATAATCCTCAAAGCATCCTGCTTGATTTTATTAGCAGTTGTCAGAACTTGCGTATTTGGTCACTAAATACAACAACAAGAGAATATTTGAATAGTGAGCAGCTACAG
AAAGGAAAACAAATTGATGAATGGTGGAGACAAGCAAGTAAAGGATGA

Protein sequence

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MDQSQRSSSLTAVSTSRAYQFHPARAAIVNLFDLYLGRSNRLKHEDSAREPPNKAQKRVLAINRELPPRNEQFLLDFEQIQNQFSDHDQLRAVTESVLISLVVQCSGHVP
RAEFLLFALRSLCSISYINWDTFLPSLLSSISSAEVSMGQGSQAAPTVSTTNLSQSGVLPSSNPVPNSSTFQSSNPASPLPSVHGISSPAQSSIDPSSCTALSPIKSSDL
SGTGLPSAVRVNSFLRNNAISSLRQLCCKIILSGLKFDLKPVTHADIFSHMLNWMVNWDQRQQGMEESENMKSWRPDKALIEWLHSCLDVVWLLVEENKCRVPFYELLRS
GLQFIDNIPDDEALFTLILEIHRRRDMMAMHMQMLDQHLHSPTFGTQRIFSQTMQNISGEAVASLRYSPITYPSVLGEPLHGEDIASAIQRGTRDWERAMRCIRHALRTT
PSPDWWKRVLLVAPGYRSSAQGLSPGAVFTSEMICEATIDRIFELLKLTNSEIHCWQEWLVFSDIFFFLMKSGCIDFADFVAKLFSRVTEGGQHVLRTNHVTWLFAQIIR
VELVMSALNSDARKVETTRKIISFHREDKNADPNNPQSILLDFISSCQNLRIWSLNTTTREYLNSEQLQKGKQIDEWWRQASKG

Cmc09g0252901 (gene) of Melon (Charmono) v1.1 genome