; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc09g0253461 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc09g0253461
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationCMiso1.1chr09:19381085..19384702
RNA-Seq ExpressionCmc09g0253461
SyntenyCmc09g0253461
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001584 - Integrase, catalytic core
IPR001878 - Zinc finger, CCHC-type
IPR012337 - Ribonuclease H-like superfamily
IPR013103 - Reverse transcriptase, RNA-dependent DNA polymerase
IPR025724 - GAG-pre-integrase domain
IPR036397 - Ribonuclease H superfamily
IPR036875 - Zinc finger, CCHC-type superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037745.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]0.0e+0089.71Show/hide
Query:  MEKSEIARPISTILDGSNYITWANQMKSFLIGRKLWRIVTGDITKPTKQDKEDDSKFIERLEEWDSKNHQIITWLSNTSIPAIHTQFDAFENAKELWNFL
        MEKSEIARPISTILDGSNYITWANQMKSFLIGRKLWRIVTGDITKPTKQDKEDDSKFIERLEEWDSKNHQIITWLSNTSIPAIHTQFDAFENAKELWNFL
Subjt:  MEKSEIARPISTILDGSNYITWANQMKSFLIGRKLWRIVTGDITKPTKQDKEDDSKFIERLEEWDSKNHQIITWLSNTSIPAIHTQFDAFENAKELWNFL

Query:  STRFKSVGLAHYYQLHNSLVNLNQEAGQSVNEYLAVLQPIWTQLDQATISKDHLRLIKVLMGLRPEYESVRAALLHRSPLPSLDAAIQEILFEERRLGIN
        STRFKSVGLAHYYQLHNSLVNLNQEAGQSVNEYLAVLQPIWTQLDQATISKDHLRLIKVLMGLRPEYESVRAALLHRSPLPSLDAAIQEILFEERRLGIN
Subjt:  STRFKSVGLAHYYQLHNSLVNLNQEAGQSVNEYLAVLQPIWTQLDQATISKDHLRLIKVLMGLRPEYESVRAALLHRSPLPSLDAAIQEILFEERRLGIN

Query:  LSKHSDAVLASTYSPPGASSTFCKNCKLTGHKFINCPKIECRYCHKPGHILDNCPIKPPRPRNYSTRAKNFTKPSNSSAATVAPDKSTIPQFQISDLQSL
        LSKHSDAVLASTYSPPGASSTFCKNCKLTGHKFINCPKIECRYCHKPGHILDNCPIKPPRPRNYSTRAKNFTKPSNSSAATVA DKSTIPQFQISDLQSL
Subjt:  LSKHSDAVLASTYSPPGASSTFCKNCKLTGHKFINCPKIECRYCHKPGHILDNCPIKPPRPRNYSTRAKNFTKPSNSSAATVAPDKSTIPQFQISDLQSL

Query:  LNQLISSPSSALA---------------------------------------------------------------------------------------
        LNQLISSPSSALA                                                                                       
Subjt:  LNQLISSPSSALA---------------------------------------------------------------------------------------

Query:  ------VQDPQTGQTIGTGRKVGRLFELLSLQVPSPSISAPVTDSDTYQWHLRLGHASPEKLRHLISINNLNSITKFVPFNCLNCKLAKQPALSFSTSTS
              VQDPQTGQTIGTGRKVGRLFE+LSLQVPSPSISAPVTDSDTYQWHLRLGHASPEKLRHLISINNLNSITKFVPFNCLNCKLAKQPALSFSTSTS
Subjt:  ------VQDPQTGQTIGTGRKVGRLFELLSLQVPSPSISAPVTDSDTYQWHLRLGHASPEKLRHLISINNLNSITKFVPFNCLNCKLAKQPALSFSTSTS

Query:  ICDKPFDLIHSDIWGPAPTSTVHGYRYYVLFIDDFSRFTWIYFLKHRSELSRTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTLVQRSC
        ICDKPFDLIHSDIWGPAPTSTVHGYRYYVLFIDDFSRFTWIYFLKHRSELSRTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTLVQRSC
Subjt:  ICDKPFDLIHSDIWGPAPTSTVHGYRYYVLFIDDFSRFTWIYFLKHRSELSRTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTLVQRSC

Query:  PHTSQQNGRAERKHRHILDSVRALLLSASCPEKFWGEAALTSVYTINRLPSSVLQNISPFERLYGTPPNYSNLKVFGCACFVLLQPHEHTKLEPRARLCC
        PHTSQQNGRAERKHRHILDSVRALLLSASCPEKFWGEAALTSVYTINRLPSSVLQNISPFERLYGTPPNYSNLKVFGCACFVLLQPHEHTKLEPRARLCC
Subjt:  PHTSQQNGRAERKHRHILDSVRALLLSASCPEKFWGEAALTSVYTINRLPSSVLQNISPFERLYGTPPNYSNLKVFGCACFVLLQPHEHTKLEPRARLCC

Query:  FLGYGTEHKGFRCWDPLSNRLRISRHVTFWEHTMFSRLSSFHASFSSPQSFFTDTSIDLFPLSESTPGNELAQSAPTSATSDQSSISDGNPDPPPDIPPR
        FLGYGTEHKGFRCWDPLSNRLRISRHVTFWEHTMFSRLSSFHASFSSPQSFFTDTSIDLFPLSESTPGNELAQSAPTSATSDQSSISDGNPDPPPDIPPR
Subjt:  FLGYGTEHKGFRCWDPLSNRLRISRHVTFWEHTMFSRLSSFHASFSSPQSFFTDTSIDLFPLSESTPGNELAQSAPTSATSDQSSISDGNPDPPPDIPPR

Query:  RSTRVREPPIHLQDYHCFSTIVSLIEPTSYQEASTDPLWQKAMNDELQALEKMHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIECYKARLVAKGYSQEY
        RSTRVREPPIHLQDYHCFSTIVSLIEPTSYQEASTDPLWQKAMNDELQALEKMHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIE YKARLVAKGYSQEY
Subjt:  RSTRVREPPIHLQDYHCFSTIVSLIEPTSYQEASTDPLWQKAMNDELQALEKMHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIECYKARLVAKGYSQEY

Query:  GIDYEETFAPVARMTSVRSLLAVAAAKQWPLLQMDVKNAFLMG
        GIDYEETFAPVARMTSVRSLLAVAAAKQWPLLQMDVKNAFL G
Subjt:  GIDYEETFAPVARMTSVRSLLAVAAAKQWPLLQMDVKNAFLMG

KAA0041601.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]0.0e+0089.93Show/hide
Query:  MEKSEIARPISTILDGSNYITWANQMKSFLIGRKLWRIVTGDITKPTKQDKEDDSKFIERLEEWDSKNHQIITWLSNTSIPAIHTQFDAFENAKELWNFL
        MEKSEIARPISTILDGSNYITWANQMKSFLIGRKLWRIVTGDITKPTKQDKEDDSKFIERLEEWDSKNHQIITWLSNTSIPAIHTQFDAFENAKELWNFL
Subjt:  MEKSEIARPISTILDGSNYITWANQMKSFLIGRKLWRIVTGDITKPTKQDKEDDSKFIERLEEWDSKNHQIITWLSNTSIPAIHTQFDAFENAKELWNFL

Query:  STRFKSVGLAHYYQLHNSLVNLNQEAGQSVNEYLAVLQPIWTQLDQATISKDHLRLIKVLMGLRPEYESVRAALLHRSPLPSLDAAIQEILFEERRLGIN
        STRFKSVGLAHYYQLHNSLVNLNQEAGQSVNEYLAVLQPIWTQLDQATISKDHLRLIKVLMGLRPEYESVRAALLHRSPLPSLDAAIQEILFEERRLGIN
Subjt:  STRFKSVGLAHYYQLHNSLVNLNQEAGQSVNEYLAVLQPIWTQLDQATISKDHLRLIKVLMGLRPEYESVRAALLHRSPLPSLDAAIQEILFEERRLGIN

Query:  LSKHSDAVLASTYSPPGASSTFCKNCKLTGHKFINCPKIECRYCHKPGHILDNCPIKPPRPRNYSTRAKNFTKPSNSSAATVAPDKSTIPQFQISDLQSL
        LSKHSDAVLASTYSPPGASSTFCKNCKLTGHKFINCPKIECRYCHKPGHILDNCPIKPPRPRNYSTRAKNFTKPSNSSAATVAPDKSTIPQFQISDLQSL
Subjt:  LSKHSDAVLASTYSPPGASSTFCKNCKLTGHKFINCPKIECRYCHKPGHILDNCPIKPPRPRNYSTRAKNFTKPSNSSAATVAPDKSTIPQFQISDLQSL

Query:  LNQLISSPSSALA---------------------------------------------------------------------------------------
        LNQLISSPSSALA                                                                                       
Subjt:  LNQLISSPSSALA---------------------------------------------------------------------------------------

Query:  ------VQDPQTGQTIGTGRKVGRLFELLSLQVPSPSISAPVTDSDTYQWHLRLGHASPEKLRHLISINNLNSITKFVPFNCLNCKLAKQPALSFSTSTS
              VQDPQTGQTIGTGRKVGRLFELLSLQVPSPSISAPVTDSDTYQWHLRLGHASPEKLRHLISINNLNSITKFVPFNCLNCKLAKQPALSFSTSTS
Subjt:  ------VQDPQTGQTIGTGRKVGRLFELLSLQVPSPSISAPVTDSDTYQWHLRLGHASPEKLRHLISINNLNSITKFVPFNCLNCKLAKQPALSFSTSTS

Query:  ICDKPFDLIHSDIWGPAPTSTVHGYRYYVLFIDDFSRFTWIYFLKHRSELSRTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTLVQRSC
        ICDKPFDLIHSDIWGPAPTSTVHGYRYYVLFIDDFSRFTWIYFLKHRSELSRTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTLVQRSC
Subjt:  ICDKPFDLIHSDIWGPAPTSTVHGYRYYVLFIDDFSRFTWIYFLKHRSELSRTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTLVQRSC

Query:  PHTSQQNGRAERKHRHILDSVRALLLSASCPEKFWGEAALTSVYTINRLPSSVLQNISPFERLYGTPPNYSNLKVFGCACFVLLQPHEHTKLEPRARLCC
        PHTSQQNGRAERKHRHILDSVRALLLSASCPEKFWGEAALTSVYTINRLPSSVLQNISPFERLYGTPPNYSNLKVFGCACFVLLQPHEHTKLEPRARLCC
Subjt:  PHTSQQNGRAERKHRHILDSVRALLLSASCPEKFWGEAALTSVYTINRLPSSVLQNISPFERLYGTPPNYSNLKVFGCACFVLLQPHEHTKLEPRARLCC

Query:  FLGYGTEHKGFRCWDPLSNRLRISRHVTFWEHTMFSRLSSFHASFSSPQSFFTDTSIDLFPLSESTPGNELAQSAPTSATSDQSSISDGNPDPPPDIPPR
        FLGYGTEHKGFRCWDPLSNRLRISRHVTFWEHTMFSRLSSFHASFSSPQSFFTDTSIDLFPLSESTPGNELAQSAPTSATSDQSSISDGNPDPPPDIPPR
Subjt:  FLGYGTEHKGFRCWDPLSNRLRISRHVTFWEHTMFSRLSSFHASFSSPQSFFTDTSIDLFPLSESTPGNELAQSAPTSATSDQSSISDGNPDPPPDIPPR

Query:  RSTRVREPPIHLQDYHCFSTIVSLIEPTSYQEASTDPLWQKAMNDELQALEKMHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIECYKARLVAKGYSQEY
        RSTRVREPPIHLQDYHCFSTIVSLIEPTSYQEASTDPLWQKAMNDELQALEKMHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIE YKARLVAKGYSQEY
Subjt:  RSTRVREPPIHLQDYHCFSTIVSLIEPTSYQEASTDPLWQKAMNDELQALEKMHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIECYKARLVAKGYSQEY

Query:  GIDYEETFAPVARMTSVRSLLAVAAAKQWPLLQMDVKNAFLMG
        GIDYEETFAPVARMTSVRSLLAVAAAKQWPLLQMDVKNAFL G
Subjt:  GIDYEETFAPVARMTSVRSLLAVAAAKQWPLLQMDVKNAFLMG

TYK04714.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]0.0e+0089.93Show/hide
Query:  MEKSEIARPISTILDGSNYITWANQMKSFLIGRKLWRIVTGDITKPTKQDKEDDSKFIERLEEWDSKNHQIITWLSNTSIPAIHTQFDAFENAKELWNFL
        MEKSEIARPISTILDGSNYITWANQMKSFLIGRKLWRIVTGDITKPTKQDKEDDSKFIERLEEWDSKNHQIITWLSNTSIPAIHTQFDAFENAKELWNFL
Subjt:  MEKSEIARPISTILDGSNYITWANQMKSFLIGRKLWRIVTGDITKPTKQDKEDDSKFIERLEEWDSKNHQIITWLSNTSIPAIHTQFDAFENAKELWNFL

Query:  STRFKSVGLAHYYQLHNSLVNLNQEAGQSVNEYLAVLQPIWTQLDQATISKDHLRLIKVLMGLRPEYESVRAALLHRSPLPSLDAAIQEILFEERRLGIN
        STRFKSVGLAHYYQLHNSLVNLNQEAGQSVNEYLAVLQPIWTQLDQATISKDHLRLIKVLMGLRPEYESVRAALLHRSPLPSLDAAIQEILFEERRLGIN
Subjt:  STRFKSVGLAHYYQLHNSLVNLNQEAGQSVNEYLAVLQPIWTQLDQATISKDHLRLIKVLMGLRPEYESVRAALLHRSPLPSLDAAIQEILFEERRLGIN

Query:  LSKHSDAVLASTYSPPGASSTFCKNCKLTGHKFINCPKIECRYCHKPGHILDNCPIKPPRPRNYSTRAKNFTKPSNSSAATVAPDKSTIPQFQISDLQSL
        LSKHSDAVLASTYSPPGASSTFCKNCKLTGHKFINCPKIECRYCHKPGHILDNCPIKPPRPRNYSTRAKNFTKPSNSSAATVAPDKSTIPQFQISDLQSL
Subjt:  LSKHSDAVLASTYSPPGASSTFCKNCKLTGHKFINCPKIECRYCHKPGHILDNCPIKPPRPRNYSTRAKNFTKPSNSSAATVAPDKSTIPQFQISDLQSL

Query:  LNQLISSPSSALA---------------------------------------------------------------------------------------
        LNQLISSPSSALA                                                                                       
Subjt:  LNQLISSPSSALA---------------------------------------------------------------------------------------

Query:  ------VQDPQTGQTIGTGRKVGRLFELLSLQVPSPSISAPVTDSDTYQWHLRLGHASPEKLRHLISINNLNSITKFVPFNCLNCKLAKQPALSFSTSTS
              VQDPQTGQTIGTGRKVGRLFELLSLQVPSPSISAPVTDSDTYQWHLRLGHASPEKLRHLISINNLNSITKFVPFNCLNCKLAKQPALSFSTSTS
Subjt:  ------VQDPQTGQTIGTGRKVGRLFELLSLQVPSPSISAPVTDSDTYQWHLRLGHASPEKLRHLISINNLNSITKFVPFNCLNCKLAKQPALSFSTSTS

Query:  ICDKPFDLIHSDIWGPAPTSTVHGYRYYVLFIDDFSRFTWIYFLKHRSELSRTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTLVQRSC
        ICDKPFDLIHSDIWGPAPTSTVHGYRYYVLFIDDFSRFTWIYFLKHRSELSRTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTLVQRSC
Subjt:  ICDKPFDLIHSDIWGPAPTSTVHGYRYYVLFIDDFSRFTWIYFLKHRSELSRTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTLVQRSC

Query:  PHTSQQNGRAERKHRHILDSVRALLLSASCPEKFWGEAALTSVYTINRLPSSVLQNISPFERLYGTPPNYSNLKVFGCACFVLLQPHEHTKLEPRARLCC
        PHTSQQNGRAERKHRHILDSVRALLLSASCPEKFWGEAALTSVYTINRLPSSVLQNISPFERLYGTPPNYSNLKVFGCACFVLLQPHEHTKLEPRARLCC
Subjt:  PHTSQQNGRAERKHRHILDSVRALLLSASCPEKFWGEAALTSVYTINRLPSSVLQNISPFERLYGTPPNYSNLKVFGCACFVLLQPHEHTKLEPRARLCC

Query:  FLGYGTEHKGFRCWDPLSNRLRISRHVTFWEHTMFSRLSSFHASFSSPQSFFTDTSIDLFPLSESTPGNELAQSAPTSATSDQSSISDGNPDPPPDIPPR
        FLGYGTEHKGFRCWDPLSNRLRISRHVTFWEHTMFSRLSSFHASFSSPQSFFTDTSIDLFPLSESTPGNELAQSAPTSATSDQSSISDGNPDPPPDIPPR
Subjt:  FLGYGTEHKGFRCWDPLSNRLRISRHVTFWEHTMFSRLSSFHASFSSPQSFFTDTSIDLFPLSESTPGNELAQSAPTSATSDQSSISDGNPDPPPDIPPR

Query:  RSTRVREPPIHLQDYHCFSTIVSLIEPTSYQEASTDPLWQKAMNDELQALEKMHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIECYKARLVAKGYSQEY
        RSTRVREPPIHLQDYHCFSTIVSLIEPTSYQEASTDPLWQKAMNDELQALEKMHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIE YKARLVAKGYSQEY
Subjt:  RSTRVREPPIHLQDYHCFSTIVSLIEPTSYQEASTDPLWQKAMNDELQALEKMHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIECYKARLVAKGYSQEY

Query:  GIDYEETFAPVARMTSVRSLLAVAAAKQWPLLQMDVKNAFLMG
        GIDYEETFAPVARMTSVRSLLAVAAAKQWPLLQMDVKNAFL G
Subjt:  GIDYEETFAPVARMTSVRSLLAVAAAKQWPLLQMDVKNAFLMG

TYK19656.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]0.0e+0089.93Show/hide
Query:  MEKSEIARPISTILDGSNYITWANQMKSFLIGRKLWRIVTGDITKPTKQDKEDDSKFIERLEEWDSKNHQIITWLSNTSIPAIHTQFDAFENAKELWNFL
        MEKSEIARPISTILDGSNYITWANQMKSFLIGRKLWRIVTGDITKPTKQDKEDDSKFIERLEEWDSKNHQIITWLSNTSIPAIHTQFDAFENAKELWNFL
Subjt:  MEKSEIARPISTILDGSNYITWANQMKSFLIGRKLWRIVTGDITKPTKQDKEDDSKFIERLEEWDSKNHQIITWLSNTSIPAIHTQFDAFENAKELWNFL

Query:  STRFKSVGLAHYYQLHNSLVNLNQEAGQSVNEYLAVLQPIWTQLDQATISKDHLRLIKVLMGLRPEYESVRAALLHRSPLPSLDAAIQEILFEERRLGIN
        STRFKSVGLAHYYQLHNSLVNLNQEAGQSVNEYLAVLQPIWTQLDQATISKDHLRLIKVLMGLRPEYESVRAALLHRSPLPSLDAAIQEILFEERRLGIN
Subjt:  STRFKSVGLAHYYQLHNSLVNLNQEAGQSVNEYLAVLQPIWTQLDQATISKDHLRLIKVLMGLRPEYESVRAALLHRSPLPSLDAAIQEILFEERRLGIN

Query:  LSKHSDAVLASTYSPPGASSTFCKNCKLTGHKFINCPKIECRYCHKPGHILDNCPIKPPRPRNYSTRAKNFTKPSNSSAATVAPDKSTIPQFQISDLQSL
        LSKHSDAVLASTYSPPGASSTFCKNCKLTGHKFINCPKIECRYCHKPGHILDNCPIKPPRPRNYSTRAKNFTKPSNSSAATVAPDKSTIPQFQISDLQSL
Subjt:  LSKHSDAVLASTYSPPGASSTFCKNCKLTGHKFINCPKIECRYCHKPGHILDNCPIKPPRPRNYSTRAKNFTKPSNSSAATVAPDKSTIPQFQISDLQSL

Query:  LNQLISSPSSALA---------------------------------------------------------------------------------------
        LNQLISSPSSALA                                                                                       
Subjt:  LNQLISSPSSALA---------------------------------------------------------------------------------------

Query:  ------VQDPQTGQTIGTGRKVGRLFELLSLQVPSPSISAPVTDSDTYQWHLRLGHASPEKLRHLISINNLNSITKFVPFNCLNCKLAKQPALSFSTSTS
              VQDPQTGQTIGTGRKVGRLFELLSLQVPSPSISAPVTDSDTYQWHLRLGHASPEKLRHLISINNLNSITKFVPFNCLNCKLAKQPALSFSTSTS
Subjt:  ------VQDPQTGQTIGTGRKVGRLFELLSLQVPSPSISAPVTDSDTYQWHLRLGHASPEKLRHLISINNLNSITKFVPFNCLNCKLAKQPALSFSTSTS

Query:  ICDKPFDLIHSDIWGPAPTSTVHGYRYYVLFIDDFSRFTWIYFLKHRSELSRTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTLVQRSC
        ICDKPFDLIHSDIWGPAPTSTVHGYRYYVLFIDDFSRFTWIYFLKHRSELSRTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTLVQRSC
Subjt:  ICDKPFDLIHSDIWGPAPTSTVHGYRYYVLFIDDFSRFTWIYFLKHRSELSRTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTLVQRSC

Query:  PHTSQQNGRAERKHRHILDSVRALLLSASCPEKFWGEAALTSVYTINRLPSSVLQNISPFERLYGTPPNYSNLKVFGCACFVLLQPHEHTKLEPRARLCC
        PHTSQQNGRAERKHRHILDSVRALLLSASCPEKFWGEAALTSVYTINRLPSSVLQNISPFERLYGTPPNYSNLKVFGCACFVLLQPHEHTKLEPRARLCC
Subjt:  PHTSQQNGRAERKHRHILDSVRALLLSASCPEKFWGEAALTSVYTINRLPSSVLQNISPFERLYGTPPNYSNLKVFGCACFVLLQPHEHTKLEPRARLCC

Query:  FLGYGTEHKGFRCWDPLSNRLRISRHVTFWEHTMFSRLSSFHASFSSPQSFFTDTSIDLFPLSESTPGNELAQSAPTSATSDQSSISDGNPDPPPDIPPR
        FLGYGTEHKGFRCWDPLSNRLRISRHVTFWEHTMFSRLSSFHASFSSPQSFFTDTSIDLFPLSESTPGNELAQSAPTSATSDQSSISDGNPDPPPDIPPR
Subjt:  FLGYGTEHKGFRCWDPLSNRLRISRHVTFWEHTMFSRLSSFHASFSSPQSFFTDTSIDLFPLSESTPGNELAQSAPTSATSDQSSISDGNPDPPPDIPPR

Query:  RSTRVREPPIHLQDYHCFSTIVSLIEPTSYQEASTDPLWQKAMNDELQALEKMHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIECYKARLVAKGYSQEY
        RSTRVREPPIHLQDYHCFSTIVSLIEPTSYQEASTDPLWQKAMNDELQALEKMHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIE YKARLVAKGYSQEY
Subjt:  RSTRVREPPIHLQDYHCFSTIVSLIEPTSYQEASTDPLWQKAMNDELQALEKMHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIECYKARLVAKGYSQEY

Query:  GIDYEETFAPVARMTSVRSLLAVAAAKQWPLLQMDVKNAFLMG
        GIDYEETFAPVARMTSVRSLLAVAAAKQWPLLQMDVKNAFL G
Subjt:  GIDYEETFAPVARMTSVRSLLAVAAAKQWPLLQMDVKNAFLMG

TYK26360.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]0.0e+0089.93Show/hide
Query:  MEKSEIARPISTILDGSNYITWANQMKSFLIGRKLWRIVTGDITKPTKQDKEDDSKFIERLEEWDSKNHQIITWLSNTSIPAIHTQFDAFENAKELWNFL
        MEKSEIARPISTILDGSNYITWANQMKSFLIGRKLWRIVTGDITKPTKQDKEDDSKFIERLEEWDSKNHQIITWLSNTSIPAIHTQFDAFENAKELWNFL
Subjt:  MEKSEIARPISTILDGSNYITWANQMKSFLIGRKLWRIVTGDITKPTKQDKEDDSKFIERLEEWDSKNHQIITWLSNTSIPAIHTQFDAFENAKELWNFL

Query:  STRFKSVGLAHYYQLHNSLVNLNQEAGQSVNEYLAVLQPIWTQLDQATISKDHLRLIKVLMGLRPEYESVRAALLHRSPLPSLDAAIQEILFEERRLGIN
        STRFKSVGLAHYYQLHNSLVNLNQEAGQSVNEYLAVLQPIWTQLDQATISKDHLRLIKVLMGLRPEYESVRAALLHRSPLPSLDAAIQEILFEERRLGIN
Subjt:  STRFKSVGLAHYYQLHNSLVNLNQEAGQSVNEYLAVLQPIWTQLDQATISKDHLRLIKVLMGLRPEYESVRAALLHRSPLPSLDAAIQEILFEERRLGIN

Query:  LSKHSDAVLASTYSPPGASSTFCKNCKLTGHKFINCPKIECRYCHKPGHILDNCPIKPPRPRNYSTRAKNFTKPSNSSAATVAPDKSTIPQFQISDLQSL
        LSKHSDAVLASTYSPPGASSTFCKNCKLTGHKFINCPKIECRYCHKPGHILDNCPIKPPRPRNYSTRAKNFTKPSNSSAATVAPDKSTIPQFQISDLQSL
Subjt:  LSKHSDAVLASTYSPPGASSTFCKNCKLTGHKFINCPKIECRYCHKPGHILDNCPIKPPRPRNYSTRAKNFTKPSNSSAATVAPDKSTIPQFQISDLQSL

Query:  LNQLISSPSSALA---------------------------------------------------------------------------------------
        LNQLISSPSSALA                                                                                       
Subjt:  LNQLISSPSSALA---------------------------------------------------------------------------------------

Query:  ------VQDPQTGQTIGTGRKVGRLFELLSLQVPSPSISAPVTDSDTYQWHLRLGHASPEKLRHLISINNLNSITKFVPFNCLNCKLAKQPALSFSTSTS
              VQDPQTGQTIGTGRKVGRLFELLSLQVPSPSISAPVTDSDTYQWHLRLGHASPEKLRHLISINNLNSITKFVPFNCLNCKLAKQPALSFSTSTS
Subjt:  ------VQDPQTGQTIGTGRKVGRLFELLSLQVPSPSISAPVTDSDTYQWHLRLGHASPEKLRHLISINNLNSITKFVPFNCLNCKLAKQPALSFSTSTS

Query:  ICDKPFDLIHSDIWGPAPTSTVHGYRYYVLFIDDFSRFTWIYFLKHRSELSRTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTLVQRSC
        ICDKPFDLIHSDIWGPAPTSTVHGYRYYVLFIDDFSRFTWIYFLKHRSELSRTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTLVQRSC
Subjt:  ICDKPFDLIHSDIWGPAPTSTVHGYRYYVLFIDDFSRFTWIYFLKHRSELSRTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTLVQRSC

Query:  PHTSQQNGRAERKHRHILDSVRALLLSASCPEKFWGEAALTSVYTINRLPSSVLQNISPFERLYGTPPNYSNLKVFGCACFVLLQPHEHTKLEPRARLCC
        PHTSQQNGRAERKHRHILDSVRALLLSASCPEKFWGEAALTSVYTINRLPSSVLQNISPFERLYGTPPNYSNLKVFGCACFVLLQPHEHTKLEPRARLCC
Subjt:  PHTSQQNGRAERKHRHILDSVRALLLSASCPEKFWGEAALTSVYTINRLPSSVLQNISPFERLYGTPPNYSNLKVFGCACFVLLQPHEHTKLEPRARLCC

Query:  FLGYGTEHKGFRCWDPLSNRLRISRHVTFWEHTMFSRLSSFHASFSSPQSFFTDTSIDLFPLSESTPGNELAQSAPTSATSDQSSISDGNPDPPPDIPPR
        FLGYGTEHKGFRCWDPLSNRLRISRHVTFWEHTMFSRLSSFHASFSSPQSFFTDTSIDLFPLSESTPGNELAQSAPTSATSDQSSISDGNPDPPPDIPPR
Subjt:  FLGYGTEHKGFRCWDPLSNRLRISRHVTFWEHTMFSRLSSFHASFSSPQSFFTDTSIDLFPLSESTPGNELAQSAPTSATSDQSSISDGNPDPPPDIPPR

Query:  RSTRVREPPIHLQDYHCFSTIVSLIEPTSYQEASTDPLWQKAMNDELQALEKMHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIECYKARLVAKGYSQEY
        RSTRVREPPIHLQDYHCFSTIVSLIEPTSYQEASTDPLWQKAMNDELQALEKMHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIE YKARLVAKGYSQEY
Subjt:  RSTRVREPPIHLQDYHCFSTIVSLIEPTSYQEASTDPLWQKAMNDELQALEKMHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIECYKARLVAKGYSQEY

Query:  GIDYEETFAPVARMTSVRSLLAVAAAKQWPLLQMDVKNAFLMG
        GIDYEETFAPVARMTSVRSLLAVAAAKQWPLLQMDVKNAFL G
Subjt:  GIDYEETFAPVARMTSVRSLLAVAAAKQWPLLQMDVKNAFLMG

TrEMBL top hitse value%identityAlignment
A0A5A7T8F2 Retrovirus-related Pol polyprotein from transposon TNT 1-940.0e+0089.71Show/hide
Query:  MEKSEIARPISTILDGSNYITWANQMKSFLIGRKLWRIVTGDITKPTKQDKEDDSKFIERLEEWDSKNHQIITWLSNTSIPAIHTQFDAFENAKELWNFL
        MEKSEIARPISTILDGSNYITWANQMKSFLIGRKLWRIVTGDITKPTKQDKEDDSKFIERLEEWDSKNHQIITWLSNTSIPAIHTQFDAFENAKELWNFL
Subjt:  MEKSEIARPISTILDGSNYITWANQMKSFLIGRKLWRIVTGDITKPTKQDKEDDSKFIERLEEWDSKNHQIITWLSNTSIPAIHTQFDAFENAKELWNFL

Query:  STRFKSVGLAHYYQLHNSLVNLNQEAGQSVNEYLAVLQPIWTQLDQATISKDHLRLIKVLMGLRPEYESVRAALLHRSPLPSLDAAIQEILFEERRLGIN
        STRFKSVGLAHYYQLHNSLVNLNQEAGQSVNEYLAVLQPIWTQLDQATISKDHLRLIKVLMGLRPEYESVRAALLHRSPLPSLDAAIQEILFEERRLGIN
Subjt:  STRFKSVGLAHYYQLHNSLVNLNQEAGQSVNEYLAVLQPIWTQLDQATISKDHLRLIKVLMGLRPEYESVRAALLHRSPLPSLDAAIQEILFEERRLGIN

Query:  LSKHSDAVLASTYSPPGASSTFCKNCKLTGHKFINCPKIECRYCHKPGHILDNCPIKPPRPRNYSTRAKNFTKPSNSSAATVAPDKSTIPQFQISDLQSL
        LSKHSDAVLASTYSPPGASSTFCKNCKLTGHKFINCPKIECRYCHKPGHILDNCPIKPPRPRNYSTRAKNFTKPSNSSAATVA DKSTIPQFQISDLQSL
Subjt:  LSKHSDAVLASTYSPPGASSTFCKNCKLTGHKFINCPKIECRYCHKPGHILDNCPIKPPRPRNYSTRAKNFTKPSNSSAATVAPDKSTIPQFQISDLQSL

Query:  LNQLISSPSSALA---------------------------------------------------------------------------------------
        LNQLISSPSSALA                                                                                       
Subjt:  LNQLISSPSSALA---------------------------------------------------------------------------------------

Query:  ------VQDPQTGQTIGTGRKVGRLFELLSLQVPSPSISAPVTDSDTYQWHLRLGHASPEKLRHLISINNLNSITKFVPFNCLNCKLAKQPALSFSTSTS
              VQDPQTGQTIGTGRKVGRLFE+LSLQVPSPSISAPVTDSDTYQWHLRLGHASPEKLRHLISINNLNSITKFVPFNCLNCKLAKQPALSFSTSTS
Subjt:  ------VQDPQTGQTIGTGRKVGRLFELLSLQVPSPSISAPVTDSDTYQWHLRLGHASPEKLRHLISINNLNSITKFVPFNCLNCKLAKQPALSFSTSTS

Query:  ICDKPFDLIHSDIWGPAPTSTVHGYRYYVLFIDDFSRFTWIYFLKHRSELSRTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTLVQRSC
        ICDKPFDLIHSDIWGPAPTSTVHGYRYYVLFIDDFSRFTWIYFLKHRSELSRTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTLVQRSC
Subjt:  ICDKPFDLIHSDIWGPAPTSTVHGYRYYVLFIDDFSRFTWIYFLKHRSELSRTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTLVQRSC

Query:  PHTSQQNGRAERKHRHILDSVRALLLSASCPEKFWGEAALTSVYTINRLPSSVLQNISPFERLYGTPPNYSNLKVFGCACFVLLQPHEHTKLEPRARLCC
        PHTSQQNGRAERKHRHILDSVRALLLSASCPEKFWGEAALTSVYTINRLPSSVLQNISPFERLYGTPPNYSNLKVFGCACFVLLQPHEHTKLEPRARLCC
Subjt:  PHTSQQNGRAERKHRHILDSVRALLLSASCPEKFWGEAALTSVYTINRLPSSVLQNISPFERLYGTPPNYSNLKVFGCACFVLLQPHEHTKLEPRARLCC

Query:  FLGYGTEHKGFRCWDPLSNRLRISRHVTFWEHTMFSRLSSFHASFSSPQSFFTDTSIDLFPLSESTPGNELAQSAPTSATSDQSSISDGNPDPPPDIPPR
        FLGYGTEHKGFRCWDPLSNRLRISRHVTFWEHTMFSRLSSFHASFSSPQSFFTDTSIDLFPLSESTPGNELAQSAPTSATSDQSSISDGNPDPPPDIPPR
Subjt:  FLGYGTEHKGFRCWDPLSNRLRISRHVTFWEHTMFSRLSSFHASFSSPQSFFTDTSIDLFPLSESTPGNELAQSAPTSATSDQSSISDGNPDPPPDIPPR

Query:  RSTRVREPPIHLQDYHCFSTIVSLIEPTSYQEASTDPLWQKAMNDELQALEKMHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIECYKARLVAKGYSQEY
        RSTRVREPPIHLQDYHCFSTIVSLIEPTSYQEASTDPLWQKAMNDELQALEKMHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIE YKARLVAKGYSQEY
Subjt:  RSTRVREPPIHLQDYHCFSTIVSLIEPTSYQEASTDPLWQKAMNDELQALEKMHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIECYKARLVAKGYSQEY

Query:  GIDYEETFAPVARMTSVRSLLAVAAAKQWPLLQMDVKNAFLMG
        GIDYEETFAPVARMTSVRSLLAVAAAKQWPLLQMDVKNAFL G
Subjt:  GIDYEETFAPVARMTSVRSLLAVAAAKQWPLLQMDVKNAFLMG

A0A5A7VIT8 Retrovirus-related Pol polyprotein from transposon TNT 1-940.0e+0089.93Show/hide
Query:  MEKSEIARPISTILDGSNYITWANQMKSFLIGRKLWRIVTGDITKPTKQDKEDDSKFIERLEEWDSKNHQIITWLSNTSIPAIHTQFDAFENAKELWNFL
        MEKSEIARPISTILDGSNYITWANQMKSFLIGRKLWRIVTGDITKPTKQDKEDDSKFIERLEEWDSKNHQIITWLSNTSIPAIHTQFDAFENAKELWNFL
Subjt:  MEKSEIARPISTILDGSNYITWANQMKSFLIGRKLWRIVTGDITKPTKQDKEDDSKFIERLEEWDSKNHQIITWLSNTSIPAIHTQFDAFENAKELWNFL

Query:  STRFKSVGLAHYYQLHNSLVNLNQEAGQSVNEYLAVLQPIWTQLDQATISKDHLRLIKVLMGLRPEYESVRAALLHRSPLPSLDAAIQEILFEERRLGIN
        STRFKSVGLAHYYQLHNSLVNLNQEAGQSVNEYLAVLQPIWTQLDQATISKDHLRLIKVLMGLRPEYESVRAALLHRSPLPSLDAAIQEILFEERRLGIN
Subjt:  STRFKSVGLAHYYQLHNSLVNLNQEAGQSVNEYLAVLQPIWTQLDQATISKDHLRLIKVLMGLRPEYESVRAALLHRSPLPSLDAAIQEILFEERRLGIN

Query:  LSKHSDAVLASTYSPPGASSTFCKNCKLTGHKFINCPKIECRYCHKPGHILDNCPIKPPRPRNYSTRAKNFTKPSNSSAATVAPDKSTIPQFQISDLQSL
        LSKHSDAVLASTYSPPGASSTFCKNCKLTGHKFINCPKIECRYCHKPGHILDNCPIKPPRPRNYSTRAKNFTKPSNSSAATVAPDKSTIPQFQISDLQSL
Subjt:  LSKHSDAVLASTYSPPGASSTFCKNCKLTGHKFINCPKIECRYCHKPGHILDNCPIKPPRPRNYSTRAKNFTKPSNSSAATVAPDKSTIPQFQISDLQSL

Query:  LNQLISSPSSALA---------------------------------------------------------------------------------------
        LNQLISSPSSALA                                                                                       
Subjt:  LNQLISSPSSALA---------------------------------------------------------------------------------------

Query:  ------VQDPQTGQTIGTGRKVGRLFELLSLQVPSPSISAPVTDSDTYQWHLRLGHASPEKLRHLISINNLNSITKFVPFNCLNCKLAKQPALSFSTSTS
              VQDPQTGQTIGTGRKVGRLFELLSLQVPSPSISAPVTDSDTYQWHLRLGHASPEKLRHLISINNLNSITKFVPFNCLNCKLAKQPALSFSTSTS
Subjt:  ------VQDPQTGQTIGTGRKVGRLFELLSLQVPSPSISAPVTDSDTYQWHLRLGHASPEKLRHLISINNLNSITKFVPFNCLNCKLAKQPALSFSTSTS

Query:  ICDKPFDLIHSDIWGPAPTSTVHGYRYYVLFIDDFSRFTWIYFLKHRSELSRTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTLVQRSC
        ICDKPFDLIHSDIWGPAPTSTVHGYRYYVLFIDDFSRFTWIYFLKHRSELSRTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTLVQRSC
Subjt:  ICDKPFDLIHSDIWGPAPTSTVHGYRYYVLFIDDFSRFTWIYFLKHRSELSRTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTLVQRSC

Query:  PHTSQQNGRAERKHRHILDSVRALLLSASCPEKFWGEAALTSVYTINRLPSSVLQNISPFERLYGTPPNYSNLKVFGCACFVLLQPHEHTKLEPRARLCC
        PHTSQQNGRAERKHRHILDSVRALLLSASCPEKFWGEAALTSVYTINRLPSSVLQNISPFERLYGTPPNYSNLKVFGCACFVLLQPHEHTKLEPRARLCC
Subjt:  PHTSQQNGRAERKHRHILDSVRALLLSASCPEKFWGEAALTSVYTINRLPSSVLQNISPFERLYGTPPNYSNLKVFGCACFVLLQPHEHTKLEPRARLCC

Query:  FLGYGTEHKGFRCWDPLSNRLRISRHVTFWEHTMFSRLSSFHASFSSPQSFFTDTSIDLFPLSESTPGNELAQSAPTSATSDQSSISDGNPDPPPDIPPR
        FLGYGTEHKGFRCWDPLSNRLRISRHVTFWEHTMFSRLSSFHASFSSPQSFFTDTSIDLFPLSESTPGNELAQSAPTSATSDQSSISDGNPDPPPDIPPR
Subjt:  FLGYGTEHKGFRCWDPLSNRLRISRHVTFWEHTMFSRLSSFHASFSSPQSFFTDTSIDLFPLSESTPGNELAQSAPTSATSDQSSISDGNPDPPPDIPPR

Query:  RSTRVREPPIHLQDYHCFSTIVSLIEPTSYQEASTDPLWQKAMNDELQALEKMHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIECYKARLVAKGYSQEY
        RSTRVREPPIHLQDYHCFSTIVSLIEPTSYQEASTDPLWQKAMNDELQALEKMHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIE YKARLVAKGYSQEY
Subjt:  RSTRVREPPIHLQDYHCFSTIVSLIEPTSYQEASTDPLWQKAMNDELQALEKMHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIECYKARLVAKGYSQEY

Query:  GIDYEETFAPVARMTSVRSLLAVAAAKQWPLLQMDVKNAFLMG
        GIDYEETFAPVARMTSVRSLLAVAAAKQWPLLQMDVKNAFL G
Subjt:  GIDYEETFAPVARMTSVRSLLAVAAAKQWPLLQMDVKNAFLMG

A0A5D3C0D7 Retrovirus-related Pol polyprotein from transposon TNT 1-940.0e+0089.93Show/hide
Query:  MEKSEIARPISTILDGSNYITWANQMKSFLIGRKLWRIVTGDITKPTKQDKEDDSKFIERLEEWDSKNHQIITWLSNTSIPAIHTQFDAFENAKELWNFL
        MEKSEIARPISTILDGSNYITWANQMKSFLIGRKLWRIVTGDITKPTKQDKEDDSKFIERLEEWDSKNHQIITWLSNTSIPAIHTQFDAFENAKELWNFL
Subjt:  MEKSEIARPISTILDGSNYITWANQMKSFLIGRKLWRIVTGDITKPTKQDKEDDSKFIERLEEWDSKNHQIITWLSNTSIPAIHTQFDAFENAKELWNFL

Query:  STRFKSVGLAHYYQLHNSLVNLNQEAGQSVNEYLAVLQPIWTQLDQATISKDHLRLIKVLMGLRPEYESVRAALLHRSPLPSLDAAIQEILFEERRLGIN
        STRFKSVGLAHYYQLHNSLVNLNQEAGQSVNEYLAVLQPIWTQLDQATISKDHLRLIKVLMGLRPEYESVRAALLHRSPLPSLDAAIQEILFEERRLGIN
Subjt:  STRFKSVGLAHYYQLHNSLVNLNQEAGQSVNEYLAVLQPIWTQLDQATISKDHLRLIKVLMGLRPEYESVRAALLHRSPLPSLDAAIQEILFEERRLGIN

Query:  LSKHSDAVLASTYSPPGASSTFCKNCKLTGHKFINCPKIECRYCHKPGHILDNCPIKPPRPRNYSTRAKNFTKPSNSSAATVAPDKSTIPQFQISDLQSL
        LSKHSDAVLASTYSPPGASSTFCKNCKLTGHKFINCPKIECRYCHKPGHILDNCPIKPPRPRNYSTRAKNFTKPSNSSAATVAPDKSTIPQFQISDLQSL
Subjt:  LSKHSDAVLASTYSPPGASSTFCKNCKLTGHKFINCPKIECRYCHKPGHILDNCPIKPPRPRNYSTRAKNFTKPSNSSAATVAPDKSTIPQFQISDLQSL

Query:  LNQLISSPSSALA---------------------------------------------------------------------------------------
        LNQLISSPSSALA                                                                                       
Subjt:  LNQLISSPSSALA---------------------------------------------------------------------------------------

Query:  ------VQDPQTGQTIGTGRKVGRLFELLSLQVPSPSISAPVTDSDTYQWHLRLGHASPEKLRHLISINNLNSITKFVPFNCLNCKLAKQPALSFSTSTS
              VQDPQTGQTIGTGRKVGRLFELLSLQVPSPSISAPVTDSDTYQWHLRLGHASPEKLRHLISINNLNSITKFVPFNCLNCKLAKQPALSFSTSTS
Subjt:  ------VQDPQTGQTIGTGRKVGRLFELLSLQVPSPSISAPVTDSDTYQWHLRLGHASPEKLRHLISINNLNSITKFVPFNCLNCKLAKQPALSFSTSTS

Query:  ICDKPFDLIHSDIWGPAPTSTVHGYRYYVLFIDDFSRFTWIYFLKHRSELSRTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTLVQRSC
        ICDKPFDLIHSDIWGPAPTSTVHGYRYYVLFIDDFSRFTWIYFLKHRSELSRTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTLVQRSC
Subjt:  ICDKPFDLIHSDIWGPAPTSTVHGYRYYVLFIDDFSRFTWIYFLKHRSELSRTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTLVQRSC

Query:  PHTSQQNGRAERKHRHILDSVRALLLSASCPEKFWGEAALTSVYTINRLPSSVLQNISPFERLYGTPPNYSNLKVFGCACFVLLQPHEHTKLEPRARLCC
        PHTSQQNGRAERKHRHILDSVRALLLSASCPEKFWGEAALTSVYTINRLPSSVLQNISPFERLYGTPPNYSNLKVFGCACFVLLQPHEHTKLEPRARLCC
Subjt:  PHTSQQNGRAERKHRHILDSVRALLLSASCPEKFWGEAALTSVYTINRLPSSVLQNISPFERLYGTPPNYSNLKVFGCACFVLLQPHEHTKLEPRARLCC

Query:  FLGYGTEHKGFRCWDPLSNRLRISRHVTFWEHTMFSRLSSFHASFSSPQSFFTDTSIDLFPLSESTPGNELAQSAPTSATSDQSSISDGNPDPPPDIPPR
        FLGYGTEHKGFRCWDPLSNRLRISRHVTFWEHTMFSRLSSFHASFSSPQSFFTDTSIDLFPLSESTPGNELAQSAPTSATSDQSSISDGNPDPPPDIPPR
Subjt:  FLGYGTEHKGFRCWDPLSNRLRISRHVTFWEHTMFSRLSSFHASFSSPQSFFTDTSIDLFPLSESTPGNELAQSAPTSATSDQSSISDGNPDPPPDIPPR

Query:  RSTRVREPPIHLQDYHCFSTIVSLIEPTSYQEASTDPLWQKAMNDELQALEKMHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIECYKARLVAKGYSQEY
        RSTRVREPPIHLQDYHCFSTIVSLIEPTSYQEASTDPLWQKAMNDELQALEKMHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIE YKARLVAKGYSQEY
Subjt:  RSTRVREPPIHLQDYHCFSTIVSLIEPTSYQEASTDPLWQKAMNDELQALEKMHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIECYKARLVAKGYSQEY

Query:  GIDYEETFAPVARMTSVRSLLAVAAAKQWPLLQMDVKNAFLMG
        GIDYEETFAPVARMTSVRSLLAVAAAKQWPLLQMDVKNAFL G
Subjt:  GIDYEETFAPVARMTSVRSLLAVAAAKQWPLLQMDVKNAFLMG

A0A5D3D7V8 Retrovirus-related Pol polyprotein from transposon TNT 1-940.0e+0089.93Show/hide
Query:  MEKSEIARPISTILDGSNYITWANQMKSFLIGRKLWRIVTGDITKPTKQDKEDDSKFIERLEEWDSKNHQIITWLSNTSIPAIHTQFDAFENAKELWNFL
        MEKSEIARPISTILDGSNYITWANQMKSFLIGRKLWRIVTGDITKPTKQDKEDDSKFIERLEEWDSKNHQIITWLSNTSIPAIHTQFDAFENAKELWNFL
Subjt:  MEKSEIARPISTILDGSNYITWANQMKSFLIGRKLWRIVTGDITKPTKQDKEDDSKFIERLEEWDSKNHQIITWLSNTSIPAIHTQFDAFENAKELWNFL

Query:  STRFKSVGLAHYYQLHNSLVNLNQEAGQSVNEYLAVLQPIWTQLDQATISKDHLRLIKVLMGLRPEYESVRAALLHRSPLPSLDAAIQEILFEERRLGIN
        STRFKSVGLAHYYQLHNSLVNLNQEAGQSVNEYLAVLQPIWTQLDQATISKDHLRLIKVLMGLRPEYESVRAALLHRSPLPSLDAAIQEILFEERRLGIN
Subjt:  STRFKSVGLAHYYQLHNSLVNLNQEAGQSVNEYLAVLQPIWTQLDQATISKDHLRLIKVLMGLRPEYESVRAALLHRSPLPSLDAAIQEILFEERRLGIN

Query:  LSKHSDAVLASTYSPPGASSTFCKNCKLTGHKFINCPKIECRYCHKPGHILDNCPIKPPRPRNYSTRAKNFTKPSNSSAATVAPDKSTIPQFQISDLQSL
        LSKHSDAVLASTYSPPGASSTFCKNCKLTGHKFINCPKIECRYCHKPGHILDNCPIKPPRPRNYSTRAKNFTKPSNSSAATVAPDKSTIPQFQISDLQSL
Subjt:  LSKHSDAVLASTYSPPGASSTFCKNCKLTGHKFINCPKIECRYCHKPGHILDNCPIKPPRPRNYSTRAKNFTKPSNSSAATVAPDKSTIPQFQISDLQSL

Query:  LNQLISSPSSALA---------------------------------------------------------------------------------------
        LNQLISSPSSALA                                                                                       
Subjt:  LNQLISSPSSALA---------------------------------------------------------------------------------------

Query:  ------VQDPQTGQTIGTGRKVGRLFELLSLQVPSPSISAPVTDSDTYQWHLRLGHASPEKLRHLISINNLNSITKFVPFNCLNCKLAKQPALSFSTSTS
              VQDPQTGQTIGTGRKVGRLFELLSLQVPSPSISAPVTDSDTYQWHLRLGHASPEKLRHLISINNLNSITKFVPFNCLNCKLAKQPALSFSTSTS
Subjt:  ------VQDPQTGQTIGTGRKVGRLFELLSLQVPSPSISAPVTDSDTYQWHLRLGHASPEKLRHLISINNLNSITKFVPFNCLNCKLAKQPALSFSTSTS

Query:  ICDKPFDLIHSDIWGPAPTSTVHGYRYYVLFIDDFSRFTWIYFLKHRSELSRTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTLVQRSC
        ICDKPFDLIHSDIWGPAPTSTVHGYRYYVLFIDDFSRFTWIYFLKHRSELSRTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTLVQRSC
Subjt:  ICDKPFDLIHSDIWGPAPTSTVHGYRYYVLFIDDFSRFTWIYFLKHRSELSRTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTLVQRSC

Query:  PHTSQQNGRAERKHRHILDSVRALLLSASCPEKFWGEAALTSVYTINRLPSSVLQNISPFERLYGTPPNYSNLKVFGCACFVLLQPHEHTKLEPRARLCC
        PHTSQQNGRAERKHRHILDSVRALLLSASCPEKFWGEAALTSVYTINRLPSSVLQNISPFERLYGTPPNYSNLKVFGCACFVLLQPHEHTKLEPRARLCC
Subjt:  PHTSQQNGRAERKHRHILDSVRALLLSASCPEKFWGEAALTSVYTINRLPSSVLQNISPFERLYGTPPNYSNLKVFGCACFVLLQPHEHTKLEPRARLCC

Query:  FLGYGTEHKGFRCWDPLSNRLRISRHVTFWEHTMFSRLSSFHASFSSPQSFFTDTSIDLFPLSESTPGNELAQSAPTSATSDQSSISDGNPDPPPDIPPR
        FLGYGTEHKGFRCWDPLSNRLRISRHVTFWEHTMFSRLSSFHASFSSPQSFFTDTSIDLFPLSESTPGNELAQSAPTSATSDQSSISDGNPDPPPDIPPR
Subjt:  FLGYGTEHKGFRCWDPLSNRLRISRHVTFWEHTMFSRLSSFHASFSSPQSFFTDTSIDLFPLSESTPGNELAQSAPTSATSDQSSISDGNPDPPPDIPPR

Query:  RSTRVREPPIHLQDYHCFSTIVSLIEPTSYQEASTDPLWQKAMNDELQALEKMHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIECYKARLVAKGYSQEY
        RSTRVREPPIHLQDYHCFSTIVSLIEPTSYQEASTDPLWQKAMNDELQALEKMHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIE YKARLVAKGYSQEY
Subjt:  RSTRVREPPIHLQDYHCFSTIVSLIEPTSYQEASTDPLWQKAMNDELQALEKMHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIECYKARLVAKGYSQEY

Query:  GIDYEETFAPVARMTSVRSLLAVAAAKQWPLLQMDVKNAFLMG
        GIDYEETFAPVARMTSVRSLLAVAAAKQWPLLQMDVKNAFL G
Subjt:  GIDYEETFAPVARMTSVRSLLAVAAAKQWPLLQMDVKNAFLMG

A0A5D3DT06 Retrovirus-related Pol polyprotein from transposon TNT 1-940.0e+0089.93Show/hide
Query:  MEKSEIARPISTILDGSNYITWANQMKSFLIGRKLWRIVTGDITKPTKQDKEDDSKFIERLEEWDSKNHQIITWLSNTSIPAIHTQFDAFENAKELWNFL
        MEKSEIARPISTILDGSNYITWANQMKSFLIGRKLWRIVTGDITKPTKQDKEDDSKFIERLEEWDSKNHQIITWLSNTSIPAIHTQFDAFENAKELWNFL
Subjt:  MEKSEIARPISTILDGSNYITWANQMKSFLIGRKLWRIVTGDITKPTKQDKEDDSKFIERLEEWDSKNHQIITWLSNTSIPAIHTQFDAFENAKELWNFL

Query:  STRFKSVGLAHYYQLHNSLVNLNQEAGQSVNEYLAVLQPIWTQLDQATISKDHLRLIKVLMGLRPEYESVRAALLHRSPLPSLDAAIQEILFEERRLGIN
        STRFKSVGLAHYYQLHNSLVNLNQEAGQSVNEYLAVLQPIWTQLDQATISKDHLRLIKVLMGLRPEYESVRAALLHRSPLPSLDAAIQEILFEERRLGIN
Subjt:  STRFKSVGLAHYYQLHNSLVNLNQEAGQSVNEYLAVLQPIWTQLDQATISKDHLRLIKVLMGLRPEYESVRAALLHRSPLPSLDAAIQEILFEERRLGIN

Query:  LSKHSDAVLASTYSPPGASSTFCKNCKLTGHKFINCPKIECRYCHKPGHILDNCPIKPPRPRNYSTRAKNFTKPSNSSAATVAPDKSTIPQFQISDLQSL
        LSKHSDAVLASTYSPPGASSTFCKNCKLTGHKFINCPKIECRYCHKPGHILDNCPIKPPRPRNYSTRAKNFTKPSNSSAATVAPDKSTIPQFQISDLQSL
Subjt:  LSKHSDAVLASTYSPPGASSTFCKNCKLTGHKFINCPKIECRYCHKPGHILDNCPIKPPRPRNYSTRAKNFTKPSNSSAATVAPDKSTIPQFQISDLQSL

Query:  LNQLISSPSSALA---------------------------------------------------------------------------------------
        LNQLISSPSSALA                                                                                       
Subjt:  LNQLISSPSSALA---------------------------------------------------------------------------------------

Query:  ------VQDPQTGQTIGTGRKVGRLFELLSLQVPSPSISAPVTDSDTYQWHLRLGHASPEKLRHLISINNLNSITKFVPFNCLNCKLAKQPALSFSTSTS
              VQDPQTGQTIGTGRKVGRLFELLSLQVPSPSISAPVTDSDTYQWHLRLGHASPEKLRHLISINNLNSITKFVPFNCLNCKLAKQPALSFSTSTS
Subjt:  ------VQDPQTGQTIGTGRKVGRLFELLSLQVPSPSISAPVTDSDTYQWHLRLGHASPEKLRHLISINNLNSITKFVPFNCLNCKLAKQPALSFSTSTS

Query:  ICDKPFDLIHSDIWGPAPTSTVHGYRYYVLFIDDFSRFTWIYFLKHRSELSRTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTLVQRSC
        ICDKPFDLIHSDIWGPAPTSTVHGYRYYVLFIDDFSRFTWIYFLKHRSELSRTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTLVQRSC
Subjt:  ICDKPFDLIHSDIWGPAPTSTVHGYRYYVLFIDDFSRFTWIYFLKHRSELSRTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTLVQRSC

Query:  PHTSQQNGRAERKHRHILDSVRALLLSASCPEKFWGEAALTSVYTINRLPSSVLQNISPFERLYGTPPNYSNLKVFGCACFVLLQPHEHTKLEPRARLCC
        PHTSQQNGRAERKHRHILDSVRALLLSASCPEKFWGEAALTSVYTINRLPSSVLQNISPFERLYGTPPNYSNLKVFGCACFVLLQPHEHTKLEPRARLCC
Subjt:  PHTSQQNGRAERKHRHILDSVRALLLSASCPEKFWGEAALTSVYTINRLPSSVLQNISPFERLYGTPPNYSNLKVFGCACFVLLQPHEHTKLEPRARLCC

Query:  FLGYGTEHKGFRCWDPLSNRLRISRHVTFWEHTMFSRLSSFHASFSSPQSFFTDTSIDLFPLSESTPGNELAQSAPTSATSDQSSISDGNPDPPPDIPPR
        FLGYGTEHKGFRCWDPLSNRLRISRHVTFWEHTMFSRLSSFHASFSSPQSFFTDTSIDLFPLSESTPGNELAQSAPTSATSDQSSISDGNPDPPPDIPPR
Subjt:  FLGYGTEHKGFRCWDPLSNRLRISRHVTFWEHTMFSRLSSFHASFSSPQSFFTDTSIDLFPLSESTPGNELAQSAPTSATSDQSSISDGNPDPPPDIPPR

Query:  RSTRVREPPIHLQDYHCFSTIVSLIEPTSYQEASTDPLWQKAMNDELQALEKMHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIECYKARLVAKGYSQEY
        RSTRVREPPIHLQDYHCFSTIVSLIEPTSYQEASTDPLWQKAMNDELQALEKMHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIE YKARLVAKGYSQEY
Subjt:  RSTRVREPPIHLQDYHCFSTIVSLIEPTSYQEASTDPLWQKAMNDELQALEKMHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIECYKARLVAKGYSQEY

Query:  GIDYEETFAPVARMTSVRSLLAVAAAKQWPLLQMDVKNAFLMG
        GIDYEETFAPVARMTSVRSLLAVAAAKQWPLLQMDVKNAFL G
Subjt:  GIDYEETFAPVARMTSVRSLLAVAAAKQWPLLQMDVKNAFLMG

SwissProt top hitse value%identityAlignment
P04146 Copia protein1.1e-5227.83Show/hide
Query:  WHLRLGHASPEKL-----RHLIS----INNLNSITKFVPFNCLNCKLAKQPALSFSTSTSICDKPFDLIHSDIWGPAPTSTVHGYRYYVLFIDDFSRFTW
        WH R GH S  KL     +++ S    +NNL  ++  +   CLN K A+ P       T I  +P  ++HSD+ GP    T+    Y+V+F+D F+ +  
Subjt:  WHLRLGHASPEKL-----RHLIS----INNLNSITKFVPFNCLNCKLAKQPALSFSTSTSICDKPFDLIHSDIWGPAPTSTVHGYRYYVLFIDDFSRFTW

Query:  IYFLKHRSELSRTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTLVQRSCPHTSQQNGRAERKHRHILDSVRALLLSASCPEKFWGEAAL
         Y +K++S++   + +F       F+  +  L  DN  EY  + +  F  ++G     + PHT Q NG +ER  R I +  R ++  A   + FWGEA L
Subjt:  IYFLKHRSELSRTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTLVQRSCPHTSQQNGRAERKHRHILDSVRALLLSASCPEKFWGEAAL

Query:  TSVYTINRLPSSVLQNIS--PFERLYGTPPNYSNLKVFGCACFVLLQPHEHTKLEPRARLCCFLGYGTEHKGFRCWDPLSNRLRISRHVTFWEHTMF-SR
        T+ Y INR+PS  L + S  P+E  +   P   +L+VFG   +V ++ ++  K + ++    F+GY  E  GF+ WD ++ +  ++R V   E  M  SR
Subjt:  TSVYTINRLPSSVLQNIS--PFERLYGTPPNYSNLKVFGCACFVLLQPHEHTKLEPRARLCCFLGYGTEHKGFRCWDPLSNRLRISRHVTFWEHTMF-SR

Query:  LSSFHASF------------------------------------------SSPQSFFTDTSIDL---FP-----------LSESTPGNELAQSAPTSATS
           F   F                                          S  ++F  D+   +   FP           L +S   N+   +       
Subjt:  LSSFHASF------------------------------------------SSPQSFFTDTSIDL---FP-----------LSESTPGNELAQSAPTSATS

Query:  D---QSSISDGNP-----------------DPPP-----DIPPRRSTRVREPP-------------IHLQDYHCFSTIVSLIEPTSYQEASTDPLWQKAM
        D     S   GNP                 D P      +I  RRS R++  P             + L  +  F+ + +  +   Y++  +   W++A+
Subjt:  D---QSSISDGNP-----------------DPPP-----DIPPRRSTRVREPP-------------IHLQDYHCFSTIVSLIEPTSYQEASTDPLWQKAM

Query:  NDELQALEKMHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIECYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAVAAAKQWPLLQMDVKNAFLMG
        N EL A +  +TW     P  K  +  +W++ +K +  G    YKARLVA+G++Q+Y IDYEETFAPVAR++S R +L++       + QMDVK AFL G
Subjt:  NDELQALEKMHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIECYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAVAAAKQWPLLQMDVKNAFLMG

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-943.6e-7535.35Show/hide
Query:  WHLRLGHASPEKLRHLISINNLNSITKFVPFN-CLNCKLAKQPALSFSTSTSICDKPFDLIHSDIWGPAPTSTVHGYRYYVLFIDDFSRFTWIYFLKHRS
        WH R+GH S EK   +++  +L S  K      C  C   KQ  +SF TS+       DL++SD+ GP    ++ G +Y+V FIDD SR  W+Y LK + 
Subjt:  WHLRLGHASPEKLRHLISINNLNSITKFVPFN-CLNCKLAKQPALSFSTSTSICDKPFDLIHSDIWGPAPTSTVHGYRYYVLFIDDFSRFTWIYFLKHRS

Query:  ELSRTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTLVQRSCPHTSQQNGRAERKHRHILDSVRALLLSASCPEKFWGEAALTSVYTINR
        ++ + + +F  ++  +    +K LR+DN  EY       + S  G   +++ P T Q NG AER +R I++ VR++L  A  P+ FWGEA  T+ Y INR
Subjt:  ELSRTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTLVQRSCPHTSQQNGRAERKHRHILDSVRALLLSASCPEKFWGEAALTSVYTINR

Query:  LPSSVLQNISPFERLYGTPPNYSNLKVFGCACFVLLQPHEHTKLEPRARLCCFLGYGTEHKGFRCWDPLSNRLRISRHVTFWEHTMFSRLS-SFHASFSS
         PS  L    P         +YS+LKVFGC  F  +   + TKL+ ++  C F+GYG E  G+R WDP+  ++  SR V F E  + +    S       
Subjt:  LPSSVLQNISPFERLYGTPPNYSNLKVFGCACFVLLQPHEHTKLEPRARLCCFLGYGTEHKGFRCWDPLSNRLRISRHVTFWEHTMFSRLS-SFHASFSS

Query:  PQSFFTDTSIDLFPLSESTPGNELAQSA--PTSATSDQSSISDG-------NPDPPPDIPPRRSTRVREPPIHLQDYHCFSTIVSLI----EPTSYQEAS
          +F T  S    P S  +  +E+++    P         + +G               P RRS R   P +  + Y   ST   LI    EP S +E  
Subjt:  PQSFFTDTSIDLFPLSESTPGNELAQSA--PTSATSDQSSISDG-------NPDPPPDIPPRRSTRVREPPIHLQDYHCFSTIVSLI----EPTSYQEAS

Query:  TDP---LWQKAMNDELQALEKMHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIECYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAVAAAKQWPL
        + P      KAM +E+++L+K  T+  V+LP GKRP+ CKW++K+K   D  +  YKARLV KG+ Q+ GID++E F+PV +MTS+R++L++AA+    +
Subjt:  TDP---LWQKAMNDELQALEKMHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIECYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAVAAAKQWPL

Query:  LQMDVKNAFLMG
         Q+DVK AFL G
Subjt:  LQMDVKNAFLMG

P92520 Uncharacterized mitochondrial protein AtMg008204.6e-2245.24Show/hide
Query:  EPTSYQEASTDPLWQKAMNDELQALEKMHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIECYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAVAA
        EP S   A  DP W +AM +EL AL +  TW  V  P  +  +GCKW++K K HSDGT++  KARLVAKG+ QE GI + ET++PV R  ++R++L VA 
Subjt:  EPTSYQEASTDPLWQKAMNDELQALEKMHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIECYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAVAA

Query:  AKQ-WPLLQMDVKNAFLMGLFLKKYI
          +    +    K  F MG+F KK+I
Subjt:  AKQ-WPLLQMDVKNAFLMGLFLKKYI

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE17.4e-8934.39Show/hide
Query:  SALAVQDPQTGQTIGTGRKVGRLFEL-LSLQVPSPSISAPVTDSDTYQWHLRLGHASPEKLRHLI---SINNLNSITKFVPFNCLNCKLAKQPALSFSTS
        ++  V+D  TG  +  G+    L+E  ++   P    ++P + +    WH RLGH +P  L  +I   S++ LN   KF+  +C +C + K   + FS S
Subjt:  SALAVQDPQTGQTIGTGRKVGRLFEL-LSLQVPSPSISAPVTDSDTYQWHLRLGHASPEKLRHLI---SINNLNSITKFVPFNCLNCKLAKQPALSFSTS

Query:  TSICDKPFDLIHSDIWGPAPTSTVHGYRYYVLFIDDFSRFTWIYFLKHRSELSRTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTLVQR
        T    +P + I+SD+W  +P  +   YRYYV+F+D F+R+TW+Y LK +S++  T+I F N++  +F   I T  +DN  E+    L  + SQ G     
Subjt:  TSICDKPFDLIHSDIWGPAPTSTVHGYRYYVLFIDDFSRFTWIYFLKHRSELSRTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTLVQR

Query:  SCPHTSQQNGRAERKHRHILDSVRALLLSASCPEKFWGEAALTSVYTINRLPSSVLQNISPFERLYGTPPNYSNLKVFGCACFVLLQPHEHTKLEPRARL
        S PHT + NG +ERKHRHI+++   LL  AS P+ +W  A   +VY INRLP+ +LQ  SPF++L+GT PNY  L+VFGCAC+  L+P+   KL+ ++R 
Subjt:  SCPHTSQQNGRAERKHRHILDSVRALLLSASCPEKFWGEAALTSVYTINRLPSSVLQNISPFERLYGTPPNYSNLKVFGCACFVLLQPHEHTKLEPRARL

Query:  CCFLGYGTEHKGFRCWDPLSNRLRISRHVTFWE----------------------------HTMF-----------------------------------
        C FLGY      + C    ++RL ISRHV F E                            HT                                     
Subjt:  CCFLGYGTEHKGFRCWDPLSNRLRISRHVTFWE----------------------------HTMF-----------------------------------

Query:  -SRL-SSFHASFSS-------------PQSFFTDTSIDLFP---LSESTPGNE----LAQSAPTSATSDQS--------SISDGNPDPPPDI--PPRRST
         S L SSF +SF S             P +  T T          S++ P NE    LAQS  T A S  S        S S  +P PP  +  PP    
Subjt:  -SRL-SSFHASFSS-------------PQSFFTDTSIDLFP---LSESTPGNE----LAQSAPTSATSDQS--------SISDGNPDPPPDI--PPRRST

Query:  RV----REPPIH------------LQDYHCFSTIVSLI---EPTSYQEASTDPLWQKAMNDELQALEKMHTWDYVDLPPGKRPI-GCKWIYKIKTHSDGT
        ++     + P++            ++    +S  VSL    EP +  +A  D  W+ AM  E+ A    HTWD V  PP    I GC+WI+  K +SDG+
Subjt:  RV----REPPIH------------LQDYHCFSTIVSLI---EPTSYQEASTDPLWQKAMNDELQALEKMHTWDYVDLPPGKRPI-GCKWIYKIKTHSDGT

Query:  IECYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAVAAAKQWPLLQMDVKNAFLMG
        +  YKARLVAKGY+Q  G+DY ETF+PV + TS+R +L VA  + WP+ Q+DV NAFL G
Subjt:  IECYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAVAAAKQWPLLQMDVKNAFLMG

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE23.1e-8732.58Show/hide
Query:  SALAVQDPQTGQTIGTGRKVGRLFE--LLSLQVPSPSISAPVTDSDTYQWHLRLGHASPEKLRHLISINNLNSIT-KFVPFNCLNCKLAKQPALSFSTST
        ++  V+D  TG  +  G+    L+E  + S Q  S   ++P + +    WH RLGH S   L  +IS ++L  +       +C +C + K   + FS ST
Subjt:  SALAVQDPQTGQTIGTGRKVGRLFE--LLSLQVPSPSISAPVTDSDTYQWHLRLGHASPEKLRHLISINNLNSIT-KFVPFNCLNCKLAKQPALSFSTST

Query:  SICDKPFDLIHSDIWGPAPTSTVHGYRYYVLFIDDFSRFTWIYFLKHRSELSRTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTLVQRS
            KP + I+SD+W  +P  ++  YRYYV+F+D F+R+TW+Y LK +S++  T+I F +++  +F   I TL +DN  E+    L  +LSQ G     S
Subjt:  SICDKPFDLIHSDIWGPAPTSTVHGYRYYVLFIDDFSRFTWIYFLKHRSELSRTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTLVQRS

Query:  CPHTSQQNGRAERKHRHILDSVRALLLSASCPEKFWGEAALTSVYTINRLPSSVLQNISPFERLYGTPPNYSNLKVFGCACFVLLQPHEHTKLEPRARLC
         PHT + NG +ERKHRHI++    LL  AS P+ +W  A   +VY INRLP+ +LQ  SPF++L+G PPNY  LKVFGCAC+  L+P+   KLE +++ C
Subjt:  CPHTSQQNGRAERKHRHILDSVRALLLSASCPEKFWGEAALTSVYTINRLPSSVLQNISPFERLYGTPPNYSNLKVFGCACFVLLQPHEHTKLEPRARLC

Query:  CFLGYGTEHKGFRCWDPLSNRLRISRHVTFWEHTMFSRLSSFHASFSSPQ------SFFTDTSIDLFPL-------------------------------
         F+GY      + C    + RL  SRHV F E       ++F  S S  Q      ++ + T++   PL                               
Subjt:  CFLGYGTEHKGFRCWDPLSNRLRISRHVTFWEHTMFSRLSSFHASFSSPQ------SFFTDTSIDLFPL-------------------------------

Query:  SESTPGNEL---AQSAPT-----------------SATSDQSSISDGNPD-PPPDIP----------------PRRSTRVREP-----------------
        S + P + +   + S PT                 ++ S+   +++ NP+ P P+ P                P  ST + EP                 
Subjt:  SESTPGNEL---AQSAPT-----------------SATSDQSSISDGNPD-PPPDIP----------------PRRSTRVREP-----------------

Query:  ------------PIHL---------------QDYHCFSTIVSLIEPTSYQEASTDPLWQKAMNDELQALEKMHTWDYVDLPPGKRPI-GCKWIYKIKTHS
                    P++                Q Y   +++ +  EP +  +A  D  W++AM  E+ A    HTWD V  PP    I GC+WI+  K +S
Subjt:  ------------PIHL---------------QDYHCFSTIVSLIEPTSYQEASTDPLWQKAMNDELQALEKMHTWDYVDLPPGKRPI-GCKWIYKIKTHS

Query:  DGTIECYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAVAAAKQWPLLQMDVKNAFLMG
        DG++  YKARLVAKGY+Q  G+DY ETF+PV + TS+R +L VA  + WP+ Q+DV NAFL G
Subjt:  DGTIECYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAVAAAKQWPLLQMDVKNAFLMG

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 84.4e-3642.5Show/hide
Query:  APTSATS----DQSSISDGNPDPPPDIPPRRSTRVREPPIHLQDYHCFST---------------------------IVSLIEPTSYQEASTDPLWQKAM
        A TS++S      ++I +  P+P      RR+ +    P +LQDY+C S                            I    EP++Y EA    +W  AM
Subjt:  APTSATS----DQSSISDGNPDPPPDIPPRRSTRVREPPIHLQDYHCFST---------------------------IVSLIEPTSYQEASTDPLWQKAM

Query:  NDELQALEKMHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIECYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAVAAAKQWPLLQMDVKNAFLMG
        +DE+ A+E  HTW+   LPP K+PIGCKW+YKIK +SDGTIE YKARLVAKGY+Q+ GID+ ETF+PV ++TSV+ +LA++A   + L Q+D+ NAFL G
Subjt:  NDELQALEKMHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIECYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAVAAAKQWPLLQMDVKNAFLMG

ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase)3.3e-2345.24Show/hide
Query:  EPTSYQEASTDPLWQKAMNDELQALEKMHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIECYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAVAA
        EP S   A  DP W +AM +EL AL +  TW  V  P  +  +GCKW++K K HSDGT++  KARLVAKG+ QE GI + ET++PV R  ++R++L VA 
Subjt:  EPTSYQEASTDPLWQKAMNDELQALEKMHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIECYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAVAA

Query:  AKQ-WPLLQMDVKNAFLMGLFLKKYI
          +    +    K  F MG+F KK+I
Subjt:  AKQ-WPLLQMDVKNAFLMGLFLKKYI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAAAAGTGAAATTGCTCGTCCGATTAGCACAATTCTTGATGGCTCTAATTATATTACATGGGCCAATCAAATGAAAAGCTTCTTAATTGGACGAAAATTA
TGGCGCATTGTCACGGGAGATATTACCAAACCAACCAAACAAGACAAGGAAGATGATAGCAAATTTATAGAACGCCTTGAAGAATGGGACAGCAAAAATCATCAA
ATTATTACCTGGCTTAGTAACACGTCAATCCCTGCTATCCACACACAATTTGATGCTTTTGAAAACGCTAAGGAGTTATGGAATTTTTTGTCCACGCGATTCAAG
TCCGTCGGATTAGCGCATTACTATCAGTTGCACAATAGCCTTGTTAATCTTAATCAAGAAGCTGGTCAATCGGTTAATGAGTATCTAGCCGTGCTTCAACCTATA
TGGACTCAACTTGATCAAGCCACCATCAGTAAAGATCATCTTCGTCTTATTAAAGTCCTTATGGGACTACGTCCAGAATATGAATCTGTTAGAGCTGCCTTATTA
CACCGCAGCCCCCTGCCCTCATTAGATGCCGCTATCCAAGAAATATTATTTGAAGAAAGACGTCTTGGCATCAATCTCTCTAAACATTCTGATGCTGTTCTTGCC
AGCACCTATTCACCACCTGGAGCATCAAGCACATTTTGTAAAAATTGTAAGCTCACTGGTCATAAATTTATTAATTGTCCTAAAATAGAATGCAGGTACTGCCAT
AAGCCAGGCCACATCCTGGATAATTGCCCCATAAAACCACCTCGACCTCGCAACTATTCTACCAGAGCAAAGAACTTTACTAAACCCAGTAACTCCTCTGCTGCT
ACTGTTGCTCCGGATAAATCCACCATCCCCCAGTTCCAGATAAGTGATCTTCAAAGCTTACTAAATCAGTTGATTTCATCACCTTCCTCTGCACTTGCCGTTCAG
GATCCACAGACGGGACAGACGATTGGGACGGGTCGCAAAGTGGGCAGATTGTTTGAGCTTCTATCACTTCAGGTTCCTTCTCCATCCATCTCTGCCCCTGTCACT
GACTCTGATACATATCAGTGGCATCTTCGTCTTGGTCATGCTTCTCCAGAAAAATTGCGTCATTTAATCTCCATTAACAATTTAAATAGTATTACCAAATTTGTC
CCCTTTAATTGTTTAAATTGCAAACTTGCTAAGCAACCTGCTTTGTCATTTTCTACATCCACTTCTATTTGTGATAAACCTTTTGATTTAATCCATTCTGACATC
TGGGGGCCTGCCCCTACCTCCACCGTCCATGGTTATCGTTATTATGTGTTATTCATCGATGATTTCTCTCGATTTACATGGATTTACTTTCTCAAACACCGCTCT
GAATTATCTCGCACTTATATTGAATTTGCTAATATGATTCGTACCCAATTCTCTTGTCCCATCAAAACCCTTCGCACTGACAATGCCTTGGAGTATAAAGACTCC
ACTCTTCTATCTTTTCTCTCCCAACAGGGCACTCTTGTTCAACGCTCATGCCCCCACACTTCCCAACAAAATGGACGTGCTGAGCGCAAACATCGCCACATTCTT
GACTCAGTTCGTGCCCTTCTTCTTTCTGCCTCATGTCCTGAGAAATTTTGGGGTGAAGCAGCTCTTACATCCGTCTATACTATTAATCGTCTTCCTTCCTCCGTC
CTTCAAAACATCTCTCCATTCGAAAGACTATATGGTACTCCTCCTAACTATTCCAACCTTAAAGTCTTTGGTTGTGCTTGTTTTGTTCTCCTGCAGCCTCATGAA
CACACTAAACTTGAACCCCGTGCCCGCCTCTGCTGTTTTCTTGGCTATGGCACAGAACATAAAGGTTTTCGTTGTTGGGATCCCCTTTCCAACAGACTTCGTATA
TCCCGCCATGTCACATTTTGGGAGCACACTATGTTCTCTCGCTTATCCTCCTTCCACGCCTCCTTCTCTAGTCCCCAATCTTTCTTCACTGACACATCCATTGAT
CTTTTCCCTCTCTCTGAGTCCACTCCTGGTAATGAGCTTGCTCAATCTGCACCTACTTCTGCAACCTCGGACCAGTCGTCCATCTCTGATGGGAATCCTGACCCT
CCTCCAGACATCCCTCCTCGTCGTTCTACTCGGGTAAGGGAACCTCCTATTCATCTCCAAGATTATCACTGTTTCTCTACTATTGTTTCTCTTATTGAACCTACC
TCTTATCAAGAGGCTAGTACTGACCCTTTATGGCAGAAAGCGATGAATGATGAATTACAGGCTCTTGAAAAGATGCACACTTGGGACTATGTTGACTTACCTCCT
GGTAAAAGACCCATTGGCTGCAAGTGGATCTACAAAATCAAGACTCACTCTGATGGTACTATTGAGTGTTATAAGGCTCGGCTTGTAGCAAAAGGGTATTCCCAA
GAGTATGGCATTGACTATGAAGAAACATTTGCTCCTGTGGCTCGGATGACATCTGTACGTAGTTTACTAGCTGTTGCTGCTGCCAAGCAGTGGCCCCTTCTTCAA
ATGGATGTCAAAAATGCTTTCTTAATGGGACTCTTTCTGAAGAAGTATATATGA
mRNA sequenceShow/hide mRNA sequence
TTCATCTAAATAAATTTACATGGTATCAGAGCCTCTTTAACTAGTTACTGTTCAAACCGCCGCCGCCGCCGCCGCCGCCGTACCCATCCGACGCCCGCCTCCGTG
AAACCCAGTCGCCTTTCAGATCTCCGCGAACCCGAAGCTGCGCCTGTTTTCCCTTTGCGCGTGCGAGCCGGCCTCCGTGAAACCCAGTCGATCCCGAGCCTACCA
CCACATCCGTCGAAGCTCCACACTCCAGTCTCCGACCTCCGGCGTCGCTTGAATCTCCGTGAAGCCTGTCTCCAGCCGTCGCTGACCCGTCCGATCCGAGCGTGT
CTCCAGCCGAAACCATCAGATCCGAAGCCGAAACCATCAGATCCGAAGCCGAAACCATCAGATCCGAAGCCGAAACCATCAGTTTTGACCCGAAACCACCTACCC
GCCCCGCGCCTTTTCATCAGTTTTGACCCGAAACCACCTACCCGACCCTTTTCCATCTACCCGACCCGAAACCATCTACCCGACCTGAAATTCGCTCCATCTCTG
TGAAACCCGACCCGAAAATTGCCCTTATCTTTATTTAATTATTTTTTTCTGACTTGGTTTTCTTTTCTCTTGTGAGTAGATGGAGAAAAGTGAAATTGCTCGTCC
GATTAGCACAATTCTTGATGGCTCTAATTATATTACATGGGCCAATCAAATGAAAAGCTTCTTAATTGGACGAAAATTATGGCGCATTGTCACGGGAGATATTAC
CAAACCAACCAAACAAGACAAGGAAGATGATAGCAAATTTATAGAACGCCTTGAAGAATGGGACAGCAAAAATCATCAAATTATTACCTGGCTTAGTAACACGTC
AATCCCTGCTATCCACACACAATTTGATGCTTTTGAAAACGCTAAGGAGTTATGGAATTTTTTGTCCACGCGATTCAAGTCCGTCGGATTAGCGCATTACTATCA
GTTGCACAATAGCCTTGTTAATCTTAATCAAGAAGCTGGTCAATCGGTTAATGAGTATCTAGCCGTGCTTCAACCTATATGGACTCAACTTGATCAAGCCACCAT
CAGTAAAGATCATCTTCGTCTTATTAAAGTCCTTATGGGACTACGTCCAGAATATGAATCTGTTAGAGCTGCCTTATTACACCGCAGCCCCCTGCCCTCATTAGA
TGCCGCTATCCAAGAAATATTATTTGAAGAAAGACGTCTTGGCATCAATCTCTCTAAACATTCTGATGCTGTTCTTGCCAGCACCTATTCACCACCTGGAGCATC
AAGCACATTTTGTAAAAATTGTAAGCTCACTGGTCATAAATTTATTAATTGTCCTAAAATAGAATGCAGGTACTGCCATAAGCCAGGCCACATCCTGGATAATTG
CCCCATAAAACCACCTCGACCTCGCAACTATTCTACCAGAGCAAAGAACTTTACTAAACCCAGTAACTCCTCTGCTGCTACTGTTGCTCCGGATAAATCCACCAT
CCCCCAGTTCCAGATAAGTGATCTTCAAAGCTTACTAAATCAGTTGATTTCATCACCTTCCTCTGCACTTGCCGTTCAGGATCCACAGACGGGACAGACGATTGG
GACGGGTCGCAAAGTGGGCAGATTGTTTGAGCTTCTATCACTTCAGGTTCCTTCTCCATCCATCTCTGCCCCTGTCACTGACTCTGATACATATCAGTGGCATCT
TCGTCTTGGTCATGCTTCTCCAGAAAAATTGCGTCATTTAATCTCCATTAACAATTTAAATAGTATTACCAAATTTGTCCCCTTTAATTGTTTAAATTGCAAACT
TGCTAAGCAACCTGCTTTGTCATTTTCTACATCCACTTCTATTTGTGATAAACCTTTTGATTTAATCCATTCTGACATCTGGGGGCCTGCCCCTACCTCCACCGT
CCATGGTTATCGTTATTATGTGTTATTCATCGATGATTTCTCTCGATTTACATGGATTTACTTTCTCAAACACCGCTCTGAATTATCTCGCACTTATATTGAATT
TGCTAATATGATTCGTACCCAATTCTCTTGTCCCATCAAAACCCTTCGCACTGACAATGCCTTGGAGTATAAAGACTCCACTCTTCTATCTTTTCTCTCCCAACA
GGGCACTCTTGTTCAACGCTCATGCCCCCACACTTCCCAACAAAATGGACGTGCTGAGCGCAAACATCGCCACATTCTTGACTCAGTTCGTGCCCTTCTTCTTTC
TGCCTCATGTCCTGAGAAATTTTGGGGTGAAGCAGCTCTTACATCCGTCTATACTATTAATCGTCTTCCTTCCTCCGTCCTTCAAAACATCTCTCCATTCGAAAG
ACTATATGGTACTCCTCCTAACTATTCCAACCTTAAAGTCTTTGGTTGTGCTTGTTTTGTTCTCCTGCAGCCTCATGAACACACTAAACTTGAACCCCGTGCCCG
CCTCTGCTGTTTTCTTGGCTATGGCACAGAACATAAAGGTTTTCGTTGTTGGGATCCCCTTTCCAACAGACTTCGTATATCCCGCCATGTCACATTTTGGGAGCA
CACTATGTTCTCTCGCTTATCCTCCTTCCACGCCTCCTTCTCTAGTCCCCAATCTTTCTTCACTGACACATCCATTGATCTTTTCCCTCTCTCTGAGTCCACTCC
TGGTAATGAGCTTGCTCAATCTGCACCTACTTCTGCAACCTCGGACCAGTCGTCCATCTCTGATGGGAATCCTGACCCTCCTCCAGACATCCCTCCTCGTCGTTC
TACTCGGGTAAGGGAACCTCCTATTCATCTCCAAGATTATCACTGTTTCTCTACTATTGTTTCTCTTATTGAACCTACCTCTTATCAAGAGGCTAGTACTGACCC
TTTATGGCAGAAAGCGATGAATGATGAATTACAGGCTCTTGAAAAGATGCACACTTGGGACTATGTTGACTTACCTCCTGGTAAAAGACCCATTGGCTGCAAGTG
GATCTACAAAATCAAGACTCACTCTGATGGTACTATTGAGTGTTATAAGGCTCGGCTTGTAGCAAAAGGGTATTCCCAAGAGTATGGCATTGACTATGAAGAAAC
ATTTGCTCCTGTGGCTCGGATGACATCTGTACGTAGTTTACTAGCTGTTGCTGCTGCCAAGCAGTGGCCCCTTCTTCAAATGGATGTCAAAAATGCTTTCTTAAT
GGGACTCTTTCTGAAGAAGTATATATGAAGCCACCTCCTGGTACTTCTTCTCCTCCTCACAAGGTGTGCCTCTTGCGTCGCGCACTATATGGTCTCAAACAGGCT
CCACGAGCTTGGTTTGCCACGTTTAGCTCTACCATCACTCAACTTGGCTTTACTTCCAGTCCTCATGATACTGCACTCTTTACT
Protein sequenceShow/hide protein sequence
MEKSEIARPISTILDGSNYITWANQMKSFLIGRKLWRIVTGDITKPTKQDKEDDSKFIERLEEWDSKNHQIITWLSNTSIPAIHTQFDAFENAKELWNFLSTRFK
SVGLAHYYQLHNSLVNLNQEAGQSVNEYLAVLQPIWTQLDQATISKDHLRLIKVLMGLRPEYESVRAALLHRSPLPSLDAAIQEILFEERRLGINLSKHSDAVLA
STYSPPGASSTFCKNCKLTGHKFINCPKIECRYCHKPGHILDNCPIKPPRPRNYSTRAKNFTKPSNSSAATVAPDKSTIPQFQISDLQSLLNQLISSPSSALAVQ
DPQTGQTIGTGRKVGRLFELLSLQVPSPSISAPVTDSDTYQWHLRLGHASPEKLRHLISINNLNSITKFVPFNCLNCKLAKQPALSFSTSTSICDKPFDLIHSDI
WGPAPTSTVHGYRYYVLFIDDFSRFTWIYFLKHRSELSRTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTLVQRSCPHTSQQNGRAERKHRHIL
DSVRALLLSASCPEKFWGEAALTSVYTINRLPSSVLQNISPFERLYGTPPNYSNLKVFGCACFVLLQPHEHTKLEPRARLCCFLGYGTEHKGFRCWDPLSNRLRI
SRHVTFWEHTMFSRLSSFHASFSSPQSFFTDTSIDLFPLSESTPGNELAQSAPTSATSDQSSISDGNPDPPPDIPPRRSTRVREPPIHLQDYHCFSTIVSLIEPT
SYQEASTDPLWQKAMNDELQALEKMHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIECYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAVAAAKQWPLLQ
MDVKNAFLMGLFLKKYI