; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc09g0254111 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc09g0254111
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionYcf20-like protein isoform X1
Genome locationCMiso1.1chr09:19951604..19954456
RNA-Seq ExpressionCmc09g0254111
SyntenyCmc09g0254111
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsIPR007572 - Uncharacterised protein family Ycf20


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6579671.1 hypothetical protein SDJN03_24119, partial [Cucurbita argyrosperma subsp. sororia]2.7e-2860.94Show/hide
Query:  MAQSTSLVHTGLLNYGFSLKMNSSYWRYDMVKSRPSPPRSFRVKAVQDTGGPRRL-------------------------------------TISLSFGA
        MAQS SLV TGLLNY F+ + N+SYWRYDM+KSRPS PRS  +KAVQDTGGPRRL                                     TISLSFGA
Subjt:  MAQSTSLVHTGLLNYGFSLKMNSSYWRYDMVKSRPSPPRSFRVKAVQDTGGPRRL-------------------------------------TISLSFGA

Query:  LGVNDVIAAVVCVLLTEYVTRFYYSRPK
        LGVNDVIAAVVCVLLTEYVTRFYYSRPK
Subjt:  LGVNDVIAAVVCVLLTEYVTRFYYSRPK
XP_004143642.1 uncharacterized protein ycf20 [Cucumis sativus]2.5e-3467.19Show/hide
Query:  MAQSTSLVHTGLLNYGFSLKMNSSYWRYDMVKSRPSPPRSFRVKAVQDTGGPRRL-------------------------------------TISLSFGA
        MAQS SLVHT LLNYGF+ KMN SYWRYDMVKSRPSPPRSFRVKAVQDTGGPRRL                                     TISLSFGA
Subjt:  MAQSTSLVHTGLLNYGFSLKMNSSYWRYDMVKSRPSPPRSFRVKAVQDTGGPRRL-------------------------------------TISLSFGA

Query:  LGVNDVIAAVVCVLLTEYVTRFYYSRPK
        LGVNDVIAAVVCVLLTEYVTRFYYSRPK
Subjt:  LGVNDVIAAVVCVLLTEYVTRFYYSRPK
XP_008467245.1 PREDICTED: uncharacterized protein ycf20 isoform X1 [Cucumis melo]2.4e-3771.09Show/hide
Query:  MAQSTSLVHTGLLNYGFSLKMNSSYWRYDMVKSRPSPPRSFRVKAVQDTGGPRRL-------------------------------------TISLSFGA
        MAQSTSLVHTGLLNYGFSLKMNSSYWRYDMVKSRPSPPRSFRVKAVQDTGGPRRL                                     TISLSFGA
Subjt:  MAQSTSLVHTGLLNYGFSLKMNSSYWRYDMVKSRPSPPRSFRVKAVQDTGGPRRL-------------------------------------TISLSFGA

Query:  LGVNDVIAAVVCVLLTEYVTRFYYSRPK
        LGVNDVIAAVVCVLLTEYVTRFYYSRPK
Subjt:  LGVNDVIAAVVCVLLTEYVTRFYYSRPK
XP_008467247.1 PREDICTED: uncharacterized protein LOC103504644 isoform X2 [Cucumis melo]1.1e-5075.33Show/hide
Query:  MAQSTSLVHTGLLNYGFSLKMNSSYWRYDMVKSRPSPPRSFRVKAVQDTGGPRRL-------------------------------------TISLSFGA
        MAQSTSLVHTGLLNYGFSLKMNSSYWRYDMVKSRPSPPRSFRVKAVQDTGGPRRL                                     TISLSFGA
Subjt:  MAQSTSLVHTGLLNYGFSLKMNSSYWRYDMVKSRPSPPRSFRVKAVQDTGGPRRL-------------------------------------TISLSFGA

Query:  LGVNDVIAAVVCVLLTEYVTRFYYSRPKPPCLSNIVQQQIQIWVLALSTR
        LGVNDVIAAVVCVLLTEYVTRFYYSRPKPPCLSNIVQQQIQIWVLALSTR
Subjt:  LGVNDVIAAVVCVLLTEYVTRFYYSRPKPPCLSNIVQQQIQIWVLALSTR
XP_008467248.1 PREDICTED: uncharacterized protein LOC103504644 isoform X3 [Cucumis melo]7.3e-4268.67Show/hide
Query:  MAQSTSLVHTGLLNYGFSLKMNSSYWRYDMVKSRPSPPRSFRVKAVQDTGGPRRL-------------------------------------TISLSFGA
        MAQSTSLVHTGLLNYGFSLKMNSSYWRYDMVKSRPSPPRSFRVKAVQDTGGPRRL                                     TISLSFGA
Subjt:  MAQSTSLVHTGLLNYGFSLKMNSSYWRYDMVKSRPSPPRSFRVKAVQDTGGPRRL-------------------------------------TISLSFGA

Query:  LGVNDVIAAVVCVLLTEYVTRFYYSRPKPPCLSNIVQQQIQIWVLALSTR
        LGVNDVIAAVVCVLLTEYVTRFYYSRPK          QIQIWVLALSTR
Subjt:  LGVNDVIAAVVCVLLTEYVTRFYYSRPKPPCLSNIVQQQIQIWVLALSTR
TrEMBL top hitse value%identityAlignment
A0A0A0KPS1 Uncharacterized protein1.2e-3467.19Show/hide
Query:  MAQSTSLVHTGLLNYGFSLKMNSSYWRYDMVKSRPSPPRSFRVKAVQDTGGPRRL-------------------------------------TISLSFGA
        MAQS SLVHT LLNYGF+ KMN SYWRYDMVKSRPSPPRSFRVKAVQDTGGPRRL                                     TISLSFGA
Subjt:  MAQSTSLVHTGLLNYGFSLKMNSSYWRYDMVKSRPSPPRSFRVKAVQDTGGPRRL-------------------------------------TISLSFGA

Query:  LGVNDVIAAVVCVLLTEYVTRFYYSRPK
        LGVNDVIAAVVCVLLTEYVTRFYYSRPK
Subjt:  LGVNDVIAAVVCVLLTEYVTRFYYSRPK
A0A1S3CT33 uncharacterized protein ycf20 isoform X11.2e-3771.09Show/hide
Query:  MAQSTSLVHTGLLNYGFSLKMNSSYWRYDMVKSRPSPPRSFRVKAVQDTGGPRRL-------------------------------------TISLSFGA
        MAQSTSLVHTGLLNYGFSLKMNSSYWRYDMVKSRPSPPRSFRVKAVQDTGGPRRL                                     TISLSFGA
Subjt:  MAQSTSLVHTGLLNYGFSLKMNSSYWRYDMVKSRPSPPRSFRVKAVQDTGGPRRL-------------------------------------TISLSFGA

Query:  LGVNDVIAAVVCVLLTEYVTRFYYSRPK
        LGVNDVIAAVVCVLLTEYVTRFYYSRPK
Subjt:  LGVNDVIAAVVCVLLTEYVTRFYYSRPK
A0A1S3CTA6 uncharacterized protein LOC103504644 isoform X25.5e-5175.33Show/hide
Query:  MAQSTSLVHTGLLNYGFSLKMNSSYWRYDMVKSRPSPPRSFRVKAVQDTGGPRRL-------------------------------------TISLSFGA
        MAQSTSLVHTGLLNYGFSLKMNSSYWRYDMVKSRPSPPRSFRVKAVQDTGGPRRL                                     TISLSFGA
Subjt:  MAQSTSLVHTGLLNYGFSLKMNSSYWRYDMVKSRPSPPRSFRVKAVQDTGGPRRL-------------------------------------TISLSFGA

Query:  LGVNDVIAAVVCVLLTEYVTRFYYSRPKPPCLSNIVQQQIQIWVLALSTR
        LGVNDVIAAVVCVLLTEYVTRFYYSRPKPPCLSNIVQQQIQIWVLALSTR
Subjt:  LGVNDVIAAVVCVLLTEYVTRFYYSRPKPPCLSNIVQQQIQIWVLALSTR
A0A1S3CUD8 uncharacterized protein LOC103504644 isoform X33.6e-4268.67Show/hide
Query:  MAQSTSLVHTGLLNYGFSLKMNSSYWRYDMVKSRPSPPRSFRVKAVQDTGGPRRL-------------------------------------TISLSFGA
        MAQSTSLVHTGLLNYGFSLKMNSSYWRYDMVKSRPSPPRSFRVKAVQDTGGPRRL                                     TISLSFGA
Subjt:  MAQSTSLVHTGLLNYGFSLKMNSSYWRYDMVKSRPSPPRSFRVKAVQDTGGPRRL-------------------------------------TISLSFGA

Query:  LGVNDVIAAVVCVLLTEYVTRFYYSRPKPPCLSNIVQQQIQIWVLALSTR
        LGVNDVIAAVVCVLLTEYVTRFYYSRPK          QIQIWVLALSTR
Subjt:  LGVNDVIAAVVCVLLTEYVTRFYYSRPKPPCLSNIVQQQIQIWVLALSTR
A0A6J1I440 uncharacterized protein ycf202.9e-2860.16Show/hide
Query:  MAQSTSLVHTGLLNYGFSLKMNSSYWRYDMVKSRPSPPRSFRVKAVQDTGGPRRL-------------------------------------TISLSFGA
        MAQS SLV TGLLNY F+ + N+SYWRYD++KSRPS PRS  +KAVQDTGGPRRL                                     TISLSFGA
Subjt:  MAQSTSLVHTGLLNYGFSLKMNSSYWRYDMVKSRPSPPRSFRVKAVQDTGGPRRL-------------------------------------TISLSFGA

Query:  LGVNDVIAAVVCVLLTEYVTRFYYSRPK
        LGVNDVIAAVVCVLLTEYVTRFYYSRPK
Subjt:  LGVNDVIAAVVCVLLTEYVTRFYYSRPK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G43050.1 Protein of unknown function (DUF565)1.7e-1260Show/hide
Query:  DMVKSRPSPPRSFRVKAVQDT--GGPRRL-------TISLSFGALGVNDVIAAVVCVLLTEYVTRFYYSR
        D+++S P   R++  K  + T  GG   L       TISLSFGALGVNDVIAAV+CVLLTEYVTRFYYSR
Subjt:  DMVKSRPSPPRSFRVKAVQDT--GGPRRL-------TISLSFGALGVNDVIAAVVCVLLTEYVTRFYYSR

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCACAATCTACAAGTTTAGTCCATACTGGCCTCTTAAATTATGGTTTTAGTCTCAAAATGAATTCTTCATATTGGAGATATGATATGGTTAAATCACGACCTTCCCC
TCCTCGTAGCTTTCGTGTCAAAGCTGTACAAGATACCGGGGGTCCTCGTAGGTTAACTATCTCATTGTCATTTGGAGCTTTAGGAGTAAATGATGTTATTGCTGCTGTGG
TATGCGTTCTCCTTACCGAGTATGTTACTCGATTTTATTACAGTCGACCAAAGCCTCCGTGCCTTTCAAATATTGTACAACAGCAGATACAAATTTGGGTGCTGGCCCTG
AGTACAAGATGA
mRNA sequenceShow/hide mRNA sequence
TTTCCAAATTCGTGATTCTCTTCGCTCCGTCAAACAGGAAGCTCTCCTCTTGCTCCTCACTCGCAAAGCGGAACCTGGGAATCGAATTCAAGGTTCTCAACATTTTATCC
GAGGAAGTGAAACTTTGAATGGCACAATCTACAAGTTTAGTCCATACTGGCCTCTTAAATTATGGTTTTAGTCTCAAAATGAATTCTTCATATTGGAGATATGATATGGT
TAAATCACGACCTTCCCCTCCTCGTAGCTTTCGTGTCAAAGCTGTACAAGATACCGGGGGTCCTCGTAGGTTAACTATCTCATTGTCATTTGGAGCTTTAGGAGTAAATG
ATGTTATTGCTGCTGTGGTATGCGTTCTCCTTACCGAGTATGTTACTCGATTTTATTACAGTCGACCAAAGCCTCCGTGCCTTTCAAATATTGTACAACAGCAGATACAA
ATTTGGGTGCTGGCCCTGAGTACAAGATGAACATATTGTTTGGATTGGATTCTCTCAACTTGCAAAAAGAGAGGAAATAACCGCACAGAATTTTCCTATGTAACACTGTT
ATTACGTCAAGTATTCGGTCTCTTAAGAGACCGTTCGAGGGAAGGATTAAGTTAGGTTATAGAGGGAGGGAAAGACTAGGTTAAGTTATGGAGGGTTAGTGTTATGATAA
AATTAGTGTTATAATAAATCTAATATTATTATGATAATATGTGTTTAGAGAAAGGATTATGTAGGTAATATTATGATAATGTTATGATAATATATGTTTGGGGAAAGAGT
TAGGTACTTATGAGGGGAAGGGTTATGTAGGTAGTGTTTTGGAATTTATTTTTTTATACATTTTTTAAAAATTTGTATTCTAAATTCAATGTACAAGTTTTCTATATTTA
ATTTACCAAATTGTCTTATTTTGGTAAAACAATTTT
Protein sequenceShow/hide protein sequence
MAQSTSLVHTGLLNYGFSLKMNSSYWRYDMVKSRPSPPRSFRVKAVQDTGGPRRLTISLSFGALGVNDVIAAVVCVLLTEYVTRFYYSRPKPPCLSNIVQQQIQIWVLAL
STR