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Cmc09g0257261 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc09g0257261
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionRanBD1 domain-containing protein
Genome locationCMiso1.1chr09:21841429..21843789
RNA-Seq ExpressionCmc09g0257261
SyntenyCmc09g0257261
Gene Ontology termsGO:0015031 - protein transport (biological process)
GO:0046907 - intracellular transport (biological process)
GO:0051028 - mRNA transport (biological process)
GO:0005643 - nuclear pore (cellular component)
InterPro domainsIPR000156 - Ran binding domain
IPR011993 - PH-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8647872.1 hypothetical protein Csa_000090 [Cucumis sativus]1.1e-7295.95Show/hide
Query:  KNDLEQPSSPSVKKSEEKGVVVVHEVKCKLYVKSTDPADKDAWKDKGTGQLSIKCKEGISKGSKESKPTIVIRNDVGRLLLNALIYPGIKTNTQKNSIVA
        +NDLEQPSSPSVKKSEEKGVVVVHEVKCKLYVKSTDPADKDAWKDKGTGQLSIKCKEGISKG+KESKPTI+IRNDVGRLLLNALIYPGIKTN QKNSIVA
Subjt:  KNDLEQPSSPSVKKSEEKGVVVVHEVKCKLYVKSTDPADKDAWKDKGTGQLSIKCKEGISKGSKESKPTIVIRNDVGRLLLNALIYPGIKTNTQKNSIVA

Query:  IFHTSSEGDTNDNSDKDKVVARTYLIRLKTEDDRNKLATAIQECAPAP
        IFHTSSEG+TNDNSDKDKVVARTYLIRLKTEDDRNKLATAIQEC PAP
Subjt:  IFHTSSEGDTNDNSDKDKVVARTYLIRLKTEDDRNKLATAIQECAPAP
XP_004143935.1 uncharacterized protein LOC101205107 [Cucumis sativus]1.1e-7295.95Show/hide
Query:  KNDLEQPSSPSVKKSEEKGVVVVHEVKCKLYVKSTDPADKDAWKDKGTGQLSIKCKEGISKGSKESKPTIVIRNDVGRLLLNALIYPGIKTNTQKNSIVA
        +NDLEQPSSPSVKKSEEKGVVVVHEVKCKLYVKSTDPADKDAWKDKGTGQLSIKCKEGISKG+KESKPTI+IRNDVGRLLLNALIYPGIKTN QKNSIVA
Subjt:  KNDLEQPSSPSVKKSEEKGVVVVHEVKCKLYVKSTDPADKDAWKDKGTGQLSIKCKEGISKGSKESKPTIVIRNDVGRLLLNALIYPGIKTNTQKNSIVA

Query:  IFHTSSEGDTNDNSDKDKVVARTYLIRLKTEDDRNKLATAIQECAPAP
        IFHTSSEG+TNDNSDKDKVVARTYLIRLKTEDDRNKLATAIQEC PAP
Subjt:  IFHTSSEGDTNDNSDKDKVVARTYLIRLKTEDDRNKLATAIQECAPAP
XP_008437205.1 PREDICTED: uncharacterized protein LOC103482703 isoform X1 [Cucumis melo]4.2e-7599.32Show/hide
Query:  KNDLEQPSSPSVKKSEEKGVVVVHEVKCKLYVKSTDPADKDAWKDKGTGQLSIKCKEGISKGSKESKPTIVIRNDVGRLLLNALIYPGIKTNTQKNSIVA
        +NDLEQPSSPSVKKSEEKGVVVVHEVKCKLYVKSTDPADKDAWKDKGTGQLSIKCKEGISKGSKESKPTIVIRNDVGRLLLNALIYPGIKTNTQKNSIVA
Subjt:  KNDLEQPSSPSVKKSEEKGVVVVHEVKCKLYVKSTDPADKDAWKDKGTGQLSIKCKEGISKGSKESKPTIVIRNDVGRLLLNALIYPGIKTNTQKNSIVA

Query:  IFHTSSEGDTNDNSDKDKVVARTYLIRLKTEDDRNKLATAIQECAPAP
        IFHTSSEGDTNDNSDKDKVVARTYLIRLKTEDDRNKLATAIQECAPAP
Subjt:  IFHTSSEGDTNDNSDKDKVVARTYLIRLKTEDDRNKLATAIQECAPAP
XP_008437206.1 PREDICTED: uncharacterized protein LOC103482703 isoform X2 [Cucumis melo]4.2e-7599.32Show/hide
Query:  KNDLEQPSSPSVKKSEEKGVVVVHEVKCKLYVKSTDPADKDAWKDKGTGQLSIKCKEGISKGSKESKPTIVIRNDVGRLLLNALIYPGIKTNTQKNSIVA
        +NDLEQPSSPSVKKSEEKGVVVVHEVKCKLYVKSTDPADKDAWKDKGTGQLSIKCKEGISKGSKESKPTIVIRNDVGRLLLNALIYPGIKTNTQKNSIVA
Subjt:  KNDLEQPSSPSVKKSEEKGVVVVHEVKCKLYVKSTDPADKDAWKDKGTGQLSIKCKEGISKGSKESKPTIVIRNDVGRLLLNALIYPGIKTNTQKNSIVA

Query:  IFHTSSEGDTNDNSDKDKVVARTYLIRLKTEDDRNKLATAIQECAPAP
        IFHTSSEGDTNDNSDKDKVVARTYLIRLKTEDDRNKLATAIQECAPAP
Subjt:  IFHTSSEGDTNDNSDKDKVVARTYLIRLKTEDDRNKLATAIQECAPAP
XP_038875849.1 uncharacterized protein LOC120068214 isoform X2 [Benincasa hispida]1.2e-7194.59Show/hide
Query:  KNDLEQPSSPSVKKSEEKGVVVVHEVKCKLYVKSTDPADKDAWKDKGTGQLSIKCKEGISKGSKESKPTIVIRNDVGRLLLNALIYPGIKTNTQKNSIVA
        +NDLEQPSSPSVKKSEEKGVVVVHEVKCKLYVKSTDPADKDAWKDKGTGQLSIKCKEGISKG+KESKPTIVIRNDVGRLLLNALIYPGIKT+TQKNS+VA
Subjt:  KNDLEQPSSPSVKKSEEKGVVVVHEVKCKLYVKSTDPADKDAWKDKGTGQLSIKCKEGISKGSKESKPTIVIRNDVGRLLLNALIYPGIKTNTQKNSIVA

Query:  IFHTSSEGDTNDNSDKDKVVARTYLIRLKTEDDRNKLATAIQECAPAP
        IFHTSSEGDTN+N DKD VVARTYLIRLKTEDDRNKLA AIQECAPAP
Subjt:  IFHTSSEGDTNDNSDKDKVVARTYLIRLKTEDDRNKLATAIQECAPAP
TrEMBL top hitse value%identityAlignment
A0A0A0KMP1 RanBD1 domain-containing protein5.5e-7395.95Show/hide
Query:  KNDLEQPSSPSVKKSEEKGVVVVHEVKCKLYVKSTDPADKDAWKDKGTGQLSIKCKEGISKGSKESKPTIVIRNDVGRLLLNALIYPGIKTNTQKNSIVA
        +NDLEQPSSPSVKKSEEKGVVVVHEVKCKLYVKSTDPADKDAWKDKGTGQLSIKCKEGISKG+KESKPTI+IRNDVGRLLLNALIYPGIKTN QKNSIVA
Subjt:  KNDLEQPSSPSVKKSEEKGVVVVHEVKCKLYVKSTDPADKDAWKDKGTGQLSIKCKEGISKGSKESKPTIVIRNDVGRLLLNALIYPGIKTNTQKNSIVA

Query:  IFHTSSEGDTNDNSDKDKVVARTYLIRLKTEDDRNKLATAIQECAPAP
        IFHTSSEG+TNDNSDKDKVVARTYLIRLKTEDDRNKLATAIQEC PAP
Subjt:  IFHTSSEGDTNDNSDKDKVVARTYLIRLKTEDDRNKLATAIQECAPAP
A0A1S3AU01 uncharacterized protein LOC103482703 isoform X22.0e-7599.32Show/hide
Query:  KNDLEQPSSPSVKKSEEKGVVVVHEVKCKLYVKSTDPADKDAWKDKGTGQLSIKCKEGISKGSKESKPTIVIRNDVGRLLLNALIYPGIKTNTQKNSIVA
        +NDLEQPSSPSVKKSEEKGVVVVHEVKCKLYVKSTDPADKDAWKDKGTGQLSIKCKEGISKGSKESKPTIVIRNDVGRLLLNALIYPGIKTNTQKNSIVA
Subjt:  KNDLEQPSSPSVKKSEEKGVVVVHEVKCKLYVKSTDPADKDAWKDKGTGQLSIKCKEGISKGSKESKPTIVIRNDVGRLLLNALIYPGIKTNTQKNSIVA

Query:  IFHTSSEGDTNDNSDKDKVVARTYLIRLKTEDDRNKLATAIQECAPAP
        IFHTSSEGDTNDNSDKDKVVARTYLIRLKTEDDRNKLATAIQECAPAP
Subjt:  IFHTSSEGDTNDNSDKDKVVARTYLIRLKTEDDRNKLATAIQECAPAP
A0A1S3AU17 uncharacterized protein LOC103482703 isoform X12.0e-7599.32Show/hide
Query:  KNDLEQPSSPSVKKSEEKGVVVVHEVKCKLYVKSTDPADKDAWKDKGTGQLSIKCKEGISKGSKESKPTIVIRNDVGRLLLNALIYPGIKTNTQKNSIVA
        +NDLEQPSSPSVKKSEEKGVVVVHEVKCKLYVKSTDPADKDAWKDKGTGQLSIKCKEGISKGSKESKPTIVIRNDVGRLLLNALIYPGIKTNTQKNSIVA
Subjt:  KNDLEQPSSPSVKKSEEKGVVVVHEVKCKLYVKSTDPADKDAWKDKGTGQLSIKCKEGISKGSKESKPTIVIRNDVGRLLLNALIYPGIKTNTQKNSIVA

Query:  IFHTSSEGDTNDNSDKDKVVARTYLIRLKTEDDRNKLATAIQECAPAP
        IFHTSSEGDTNDNSDKDKVVARTYLIRLKTEDDRNKLATAIQECAPAP
Subjt:  IFHTSSEGDTNDNSDKDKVVARTYLIRLKTEDDRNKLATAIQECAPAP
A0A5A7TMK5 RanBD1 domain-containing protein2.0e-7599.32Show/hide
Query:  KNDLEQPSSPSVKKSEEKGVVVVHEVKCKLYVKSTDPADKDAWKDKGTGQLSIKCKEGISKGSKESKPTIVIRNDVGRLLLNALIYPGIKTNTQKNSIVA
        +NDLEQPSSPSVKKSEEKGVVVVHEVKCKLYVKSTDPADKDAWKDKGTGQLSIKCKEGISKGSKESKPTIVIRNDVGRLLLNALIYPGIKTNTQKNSIVA
Subjt:  KNDLEQPSSPSVKKSEEKGVVVVHEVKCKLYVKSTDPADKDAWKDKGTGQLSIKCKEGISKGSKESKPTIVIRNDVGRLLLNALIYPGIKTNTQKNSIVA

Query:  IFHTSSEGDTNDNSDKDKVVARTYLIRLKTEDDRNKLATAIQECAPAP
        IFHTSSEGDTNDNSDKDKVVARTYLIRLKTEDDRNKLATAIQECAPAP
Subjt:  IFHTSSEGDTNDNSDKDKVVARTYLIRLKTEDDRNKLATAIQECAPAP
A0A6J1HZR6 uncharacterized protein LOC111469117 isoform X35.1e-7193.24Show/hide
Query:  KNDLEQPSSPSVKKSEEKGVVVVHEVKCKLYVKSTDPADKDAWKDKGTGQLSIKCKEGISKGSKESKPTIVIRNDVGRLLLNALIYPGIKTNTQKNSIVA
        +NDLEQPSSPSVKKSEEKGVVVVHEVKCKLYVKSTDP DKDAWKDKGTGQLSIKCKEGISKG+KESKPTIVIRNDVGRLLLNA IYPGIKT+TQKNS+VA
Subjt:  KNDLEQPSSPSVKKSEEKGVVVVHEVKCKLYVKSTDPADKDAWKDKGTGQLSIKCKEGISKGSKESKPTIVIRNDVGRLLLNALIYPGIKTNTQKNSIVA

Query:  IFHTSSEGDTNDNSDKDKVVARTYLIRLKTEDDRNKLATAIQECAPAP
        IFHTSSEGDTN+N DKD VVARTYLIRLKTEDDRNKLATAIQECAP P
Subjt:  IFHTSSEGDTNDNSDKDKVVARTYLIRLKTEDDRNKLATAIQECAPAP
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G11790.1 Pleckstrin homology (PH) domain superfamily protein7.1e-4967.12Show/hide
Query:  NDLEQPSSPSVKKSEEKGVVVVHEVKCKLYVKSTDPADKDAWKDKGTGQLSIKCKEGISKGSKESKPTIVIRNDVGRLLLNALIYPGIKTNTQKNSIVAI
        ++  QPSSPSVKK+EEKG+ VVHEVKCKLYVKS+DPADK  WKDKGTG L IKCKEG+ KG+KESKPTI++RNDVG+LLLNAL+Y G+KT+ QKN++VAI
Subjt:  NDLEQPSSPSVKKSEEKGVVVVHEVKCKLYVKSTDPADKDAWKDKGTGQLSIKCKEGISKGSKESKPTIVIRNDVGRLLLNALIYPGIKTNTQKNSIVAI

Query:  FHTSSEGDTNDNSDKDKVVARTYLIRLKTEDDRNKLATAIQECAPA
        FH+S   D+N+N     V  RT+LIR K  + R+ LATAIQE AP+
Subjt:  FHTSSEGDTNDNSDKDKVVARTYLIRLKTEDDRNKLATAIQECAPA

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTTGAGGGGAGCAAGGATCTTAATTGTGAAAAATGACTTGGAGCAGCCAAGCAGCCCTTCTGTAAAGAAGTCTGAAGAGAAAGGGGTGGTTGTAGTGCAT
GAAGTTAAGTGCAAGCTTTATGTGAAGTCCACCGATCCAGCAGATAAAGATGCATGGAAAGACAAAGGCACAGGGCAGCTTTCCATAAAATGCAAGGAGGGTATC
AGCAAGGGTTCAAAGGAATCCAAACCAACAATTGTAATTCGAAATGATGTGGGGAGACTGCTTCTGAATGCTTTAATCTATCCAGGGATCAAGACAAATACTCAA
AAGAATTCCATTGTTGCAATATTCCATACTTCGAGTGAAGGCGATACAAACGATAATAGCGATAAAGATAAAGTTGTGGCACGAACATACTTGATTCGATTAAAA
ACAGAGGACGATCGGAATAAGCTGGCAACAGCAATTCAAGAATGTGCTCCAGCACCTTGA
mRNA sequenceShow/hide mRNA sequence
GGTCAGGATTGGTTTTTTGTGTTGATGCAAATGCCTTACAGCATGTAAATTGGGGGAGGGAGAGAGGGCTGTTTTAAATTGAAAGATGGCGTTGAGGGGAGCAAG
GATCTTAATTGTGAAAAATGACTTGGAGCAGCCAAGCAGCCCTTCTGTAAAGAAGTCTGAAGAGAAAGGGGTGGTTGTAGTGCATGAAGTTAAGTGCAAGCTTTA
TGTGAAGTCCACCGATCCAGCAGATAAAGATGCATGGAAAGACAAAGGCACAGGGCAGCTTTCCATAAAATGCAAGGAGGGTATCAGCAAGGGTTCAAAGGAATC
CAAACCAACAATTGTAATTCGAAATGATGTGGGGAGACTGCTTCTGAATGCTTTAATCTATCCAGGGATCAAGACAAATACTCAAAAGAATTCCATTGTTGCAAT
ATTCCATACTTCGAGTGAAGGCGATACAAACGATAATAGCGATAAAGATAAAGTTGTGGCACGAACATACTTGATTCGATTAAAAACAGAGGACGATCGGAATAA
GCTGGCAACAGCAATTCAAGAATGTGCTCCAGCACCTTGAGAGGAGAAACTAAAGATGGTGTCTTCAGAGGAAGGCACTTTTATATGAGAAGAGAATTTTGTGAG
TCTTATTTTATTTGCCCCCATTTGTGAAGGGGGTTTCTTCGGAAGACAAGATCAGTTTAAAATTCTAAATTGATCTCTCTACCAAATGAATCTACTTCTTTTAAA
GAGAGGCTGAGGCAGTTGTACTATAAACAAGATAATTCAATGCTCTGTTTTATTTAGTGTAGCAATACAATAATGCAAAATTTCTTGGTTTCTCAATTTCATCTT
TCTGTTTTGTCATGGCAATTTAGTG
Protein sequenceShow/hide protein sequence
MALRGARILIVKNDLEQPSSPSVKKSEEKGVVVVHEVKCKLYVKSTDPADKDAWKDKGTGQLSIKCKEGISKGSKESKPTIVIRNDVGRLLLNALIYPGIKTNTQ
KNSIVAIFHTSSEGDTNDNSDKDKVVARTYLIRLKTEDDRNKLATAIQECAPAP