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Cmc10g0260941 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc10g0260941
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionCytochrome b6-f complex subunit 4
Genome locationCMiso1.1chr10:2990..3409
RNA-Seq ExpressionCmc10g0260941
SyntenyCmc10g0260941
Gene Ontology termsGO:0009767 - photosynthetic electron transport chain (biological process)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0045156 - electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity (molecular function)
GO:0045158 - electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ADD31066.1 cytochrome b6/f complex subunit IV protein [Ficus sp. Moore 315]5.8e-73100Show/hide
Query:  MGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKFQ
        MGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKFQ
Subjt:  MGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKFQ

Query:  NPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF
        NPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF
Subjt:  NPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF

QWQ51329.1 cytochrome b6-f complex subunit IV [Dickinsia hydrocotyloides]5.8e-73100Show/hide
Query:  MGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKFQ
        MGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKFQ
Subjt:  MGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKFQ

Query:  NPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF
        NPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF
Subjt:  NPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF

QYF07576.1 cytochrome b6/f complex subunit IV [Prinsepia utilis]5.8e-73100Show/hide
Query:  MGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKFQ
        MGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKFQ
Subjt:  MGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKFQ

Query:  NPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF
        NPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF
Subjt:  NPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF

YP_009461758.1 cytochrome b/f [Chionanthus parkinsonii]5.8e-73100Show/hide
Query:  MGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKFQ
        MGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKFQ
Subjt:  MGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKFQ

Query:  NPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF
        NPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF
Subjt:  NPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF

YP_009627422.1 cytochrome b6/f complex subunit IV [Tinospora cordifolia]5.8e-73100Show/hide
Query:  MGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKFQ
        MGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKFQ
Subjt:  MGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKFQ

Query:  NPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF
        NPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF
Subjt:  NPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF

TrEMBL top hitse value%identityAlignment
A0A1U8LXQ6 Cytochrome b2.8e-73100Show/hide
Query:  MGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKFQ
        MGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKFQ
Subjt:  MGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKFQ

Query:  NPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF
        NPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF
Subjt:  NPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF

A0A1U9YE37 Cytochrome b6-f complex subunit 42.8e-73100Show/hide
Query:  MGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKFQ
        MGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKFQ
Subjt:  MGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKFQ

Query:  NPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF
        NPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF
Subjt:  NPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF

A0A292G397 Cytochrome b6-f complex subunit 42.8e-73100Show/hide
Query:  MGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKFQ
        MGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKFQ
Subjt:  MGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKFQ

Query:  NPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF
        NPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF
Subjt:  NPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF

A0A6B9TT79 Cytochrome b6-f complex subunit 42.8e-73100Show/hide
Query:  MGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKFQ
        MGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKFQ
Subjt:  MGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKFQ

Query:  NPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF
        NPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF
Subjt:  NPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF

A0A7H1KFU8 Cytochrome b6-f complex subunit 42.8e-73100Show/hide
Query:  MGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKFQ
        MGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKFQ
Subjt:  MGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKFQ

Query:  NPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF
        NPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF
Subjt:  NPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF

SwissProt top hitse value%identityAlignment
Q06RA1 Cytochrome b6-f complex subunit 47.6e-76100Show/hide
Query:  MGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKFQ
        MGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKFQ
Subjt:  MGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKFQ

Query:  NPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF
        NPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF
Subjt:  NPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF

Q1KXS8 Cytochrome b6-f complex subunit 47.6e-76100Show/hide
Query:  MGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKFQ
        MGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKFQ
Subjt:  MGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKFQ

Query:  NPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF
        NPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF
Subjt:  NPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF

Q2L939 Cytochrome b6-f complex subunit 47.6e-76100Show/hide
Query:  MGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKFQ
        MGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKFQ
Subjt:  MGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKFQ

Query:  NPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF
        NPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF
Subjt:  NPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF

Q4VZK4 Cytochrome b6-f complex subunit 47.6e-76100Show/hide
Query:  MGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKFQ
        MGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKFQ
Subjt:  MGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKFQ

Query:  NPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF
        NPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF
Subjt:  NPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF

Q7FNS2 Cytochrome b6-f complex subunit 47.6e-76100Show/hide
Query:  MGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKFQ
        MGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKFQ
Subjt:  MGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKFQ

Query:  NPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF
        NPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF
Subjt:  NPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF

Arabidopsis top hitse value%identityAlignment
AT2G07727.1 Di-haem cytochrome, transmembrane;Cytochrome b/b6, C-terminal4.8e-0930.89Show/hide
Query:  YIFPVVILGTIACNVGLAV---LEPSMIGE-----PADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKFQNPFRRPVA
        Y +   ++G +A  +  ++     P+++G      PA+P +TP  I+PEWYF P+  ILR++P+K  GV  +  V   LL +PF +++    + F RP+ 
Subjt:  YIFPVVILGTIACNVGLAV---LEPSMIGE-----PADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKFQNPFRRPVA

Query:  TTVFLIGTAVALWLGIGATLPID
          +F +  A  L LG     P++
Subjt:  TTVFLIGTAVALWLGIGATLPID

ATCG00730.1 photosynthetic electron transfer D1.6e-7699.28Show/hide
Query:  MGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKFQ
        MGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKFQ
Subjt:  MGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKFQ

Query:  NPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF
        NPFRRPVATTVFLIGTA ALWLGIGATLPIDKSLTLGLF
Subjt:  NPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF

ATMG00220.1 apocytochrome b4.8e-0930.89Show/hide
Query:  YIFPVVILGTIACNVGLAV---LEPSMIGE-----PADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKFQNPFRRPVA
        Y +   ++G +A  +  ++     P+++G      PA+P +TP  I+PEWYF P+  ILR++P+K  GV  +  V   LL +PF +++    + F RP+ 
Subjt:  YIFPVVILGTIACNVGLAV---LEPSMIGE-----PADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKFQNPFRRPVA

Query:  TTVFLIGTAVALWLGIGATLPID
          +F +  A  L LG     P++
Subjt:  TTVFLIGTAVALWLGIGATLPID


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTCATAATTATTACGGAGAACCCGCATGGCCCAATGATCTTTTATATATTTTTCCAGTAGTCATTCTAGGTACTATTGCATGTAACGTGGGCTTAGCGGTTCTAGA
ACCATCAATGATTGGTGAACCCGCAGATCCATTTGCAACTCCTTTGGAAATATTGCCGGAATGGTATTTCTTTCCCGTATTTCAAATACTTCGTACAGTGCCAAATAAGT
TATTGGGTGTTCTTTTAATGGTTTCCGTACCGGCGGGATTATTAACTGTACCATTTTTGGAGAATGTCAATAAATTCCAAAATCCATTTCGTCGTCCAGTAGCGACAACC
GTCTTTTTGATTGGTACCGCAGTAGCTCTTTGGTTGGGTATTGGAGCAACATTACCGATTGATAAATCCCTAACTTTAGGGCTTTTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGTCATAATTATTACGGAGAACCCGCATGGCCCAATGATCTTTTATATATTTTTCCAGTAGTCATTCTAGGTACTATTGCATGTAACGTGGGCTTAGCGGTTCTAGA
ACCATCAATGATTGGTGAACCCGCAGATCCATTTGCAACTCCTTTGGAAATATTGCCGGAATGGTATTTCTTTCCCGTATTTCAAATACTTCGTACAGTGCCAAATAAGT
TATTGGGTGTTCTTTTAATGGTTTCCGTACCGGCGGGATTATTAACTGTACCATTTTTGGAGAATGTCAATAAATTCCAAAATCCATTTCGTCGTCCAGTAGCGACAACC
GTCTTTTTGATTGGTACCGCAGTAGCTCTTTGGTTGGGTATTGGAGCAACATTACCGATTGATAAATCCCTAACTTTAGGGCTTTTTTAA
Protein sequenceShow/hide protein sequence
MGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKFQNPFRRPVATT
VFLIGTAVALWLGIGATLPIDKSLTLGLF