CuGenDBv2

Gene ID	Cmc10g0263281
Organism	Cucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	ATP synthase subunit d, mitochondrial
Genome location	CMiso1.1chr10:612346..614940
RNA-Seq Expression	Cmc10g0263281
Synteny	Cmc10g0263281
Gene Ontology terms	GO:0015986 - ATP synthesis coupled proton transport (biological process) GO:1902600 - proton transmembrane transport (biological process) GO:0000274 - mitochondrial proton-transporting ATP synthase, stator stalk (cellular component) GO:0015078 - proton transmembrane transporter activity (molecular function)
InterPro domains	IPR008689 - ATP synthase, F0 complex, subunit D, mitochondrial IPR036228 - ATP synthase, F0 complex, subunit D superfamily, mitochondrial

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004142418.1 ATP synthase subunit d, mitochondrial [Cucumis sativus]

4.7e-85

97.02

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Query:  MSGTVKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSALQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEIPKFVDTVTPQYK
        MSGT+KKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSALQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYD IEIPKFVDTVTPQYK
Subjt:  MSGTVKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSALQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEIPKFVDTVTPQYK

Query:  PKFDALLVELKEAEEKSLKESERLEKEIAEVREMKQKICTMTADEYFEKHPELRKKFDDEIRNDYWGY
        PKFDALLVELKEAE KSLKESERLEKEIAEV+EMK+KICTMTADEYFEKHPELRKKFDDEIRNDYWGY
Subjt:  PKFDALLVELKEAEEKSLKESERLEKEIAEVREMKQKICTMTADEYFEKHPELRKKFDDEIRNDYWGY

XP_008446913.1 PREDICTED: ATP synthase subunit d, mitochondrial [Cucumis melo]

2.9e-87

100

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Query:  MSGTVKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSALQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEIPKFVDTVTPQYK
        MSGTVKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSALQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEIPKFVDTVTPQYK
Subjt:  MSGTVKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSALQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEIPKFVDTVTPQYK

Query:  PKFDALLVELKEAEEKSLKESERLEKEIAEVREMKQKICTMTADEYFEKHPELRKKFDDEIRNDYWGY
        PKFDALLVELKEAEEKSLKESERLEKEIAEVREMKQKICTMTADEYFEKHPELRKKFDDEIRNDYWGY
Subjt:  PKFDALLVELKEAEEKSLKESERLEKEIAEVREMKQKICTMTADEYFEKHPELRKKFDDEIRNDYWGY

XP_022945159.1 ATP synthase subunit d, mitochondrial [Cucurbita moschata]

4.4e-83

95.24

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Query:  MSGTVKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSALQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEIPKFVDTVTPQYK
        MSGTVKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSALQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIE+PKFVDTVTPQYK
Subjt:  MSGTVKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSALQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEIPKFVDTVTPQYK

Query:  PKFDALLVELKEAEEKSLKESERLEKEIAEVREMKQKICTMTADEYFEKHPELRKKFDDEIRNDYWGY
        PKFD+LLVELKEAE KSLKESERLEKEI EV+E+K+KI TMTADEYFEKHPELRKKFDDEIRNDYWGY
Subjt:  PKFDALLVELKEAEEKSLKESERLEKEIAEVREMKQKICTMTADEYFEKHPELRKKFDDEIRNDYWGY

XP_022966719.1 ATP synthase subunit d, mitochondrial [Cucurbita maxima]

4.4e-83

95.24

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Query:  MSGTVKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSALQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEIPKFVDTVTPQYK
        MSGTVKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNS+LQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIE+PKFVDTVTPQYK
Subjt:  MSGTVKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSALQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEIPKFVDTVTPQYK

Query:  PKFDALLVELKEAEEKSLKESERLEKEIAEVREMKQKICTMTADEYFEKHPELRKKFDDEIRNDYWGY
        PKFDALLVELKEAE KSLKESERLEKEI EV+E+K+KI TMTADEYFEKHPELRKKFDDEIRNDYWGY
Subjt:  PKFDALLVELKEAEEKSLKESERLEKEIAEVREMKQKICTMTADEYFEKHPELRKKFDDEIRNDYWGY

XP_023541261.1 ATP synthase subunit d, mitochondrial [Cucurbita pepo subsp. pepo]

2.0e-83

95.83

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Query:  MSGTVKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSALQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEIPKFVDTVTPQYK
        MSGTVKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNS+LQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIE+PKFVDTVTPQYK
Subjt:  MSGTVKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSALQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEIPKFVDTVTPQYK

Query:  PKFDALLVELKEAEEKSLKESERLEKEIAEVREMKQKICTMTADEYFEKHPELRKKFDDEIRNDYWGY
        PKFDALLVELKEAE KSLKESERLEKEI EV+EMK+KI TMTADEYFEKHPELRKKFDDEIRNDYWGY
Subjt:  PKFDALLVELKEAEEKSLKESERLEKEIAEVREMKQKICTMTADEYFEKHPELRKKFDDEIRNDYWGY

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KRL4 ATP synthase subunit d, mitochondrial

2.3e-85

97.02

Show/hide

Query:  MSGTVKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSALQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEIPKFVDTVTPQYK
        MSGT+KKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSALQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYD IEIPKFVDTVTPQYK
Subjt:  MSGTVKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSALQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEIPKFVDTVTPQYK

Query:  PKFDALLVELKEAEEKSLKESERLEKEIAEVREMKQKICTMTADEYFEKHPELRKKFDDEIRNDYWGY
        PKFDALLVELKEAE KSLKESERLEKEIAEV+EMK+KICTMTADEYFEKHPELRKKFDDEIRNDYWGY
Subjt:  PKFDALLVELKEAEEKSLKESERLEKEIAEVREMKQKICTMTADEYFEKHPELRKKFDDEIRNDYWGY

A0A1S3BH29 ATP synthase subunit d, mitochondrial

1.4e-87

100

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Query:  MSGTVKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSALQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEIPKFVDTVTPQYK
        MSGTVKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSALQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEIPKFVDTVTPQYK
Subjt:  MSGTVKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSALQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEIPKFVDTVTPQYK

Query:  PKFDALLVELKEAEEKSLKESERLEKEIAEVREMKQKICTMTADEYFEKHPELRKKFDDEIRNDYWGY
        PKFDALLVELKEAEEKSLKESERLEKEIAEVREMKQKICTMTADEYFEKHPELRKKFDDEIRNDYWGY
Subjt:  PKFDALLVELKEAEEKSLKESERLEKEIAEVREMKQKICTMTADEYFEKHPELRKKFDDEIRNDYWGY

A0A5D3CDC0 ATP synthase subunit d, mitochondrial

1.4e-87

100

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Query:  MSGTVKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSALQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEIPKFVDTVTPQYK
        MSGTVKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSALQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEIPKFVDTVTPQYK
Subjt:  MSGTVKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSALQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEIPKFVDTVTPQYK

Query:  PKFDALLVELKEAEEKSLKESERLEKEIAEVREMKQKICTMTADEYFEKHPELRKKFDDEIRNDYWGY
        PKFDALLVELKEAEEKSLKESERLEKEIAEVREMKQKICTMTADEYFEKHPELRKKFDDEIRNDYWGY
Subjt:  PKFDALLVELKEAEEKSLKESERLEKEIAEVREMKQKICTMTADEYFEKHPELRKKFDDEIRNDYWGY

A0A6J1HUL8 ATP synthase subunit d, mitochondrial

2.1e-83

95.24

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Query:  MSGTVKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSALQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEIPKFVDTVTPQYK
        MSGTVKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNS+LQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIE+PKFVDTVTPQYK
Subjt:  MSGTVKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSALQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEIPKFVDTVTPQYK

Query:  PKFDALLVELKEAEEKSLKESERLEKEIAEVREMKQKICTMTADEYFEKHPELRKKFDDEIRNDYWGY
        PKFDALLVELKEAE KSLKESERLEKEI EV+E+K+KI TMTADEYFEKHPELRKKFDDEIRNDYWGY
Subjt:  PKFDALLVELKEAEEKSLKESERLEKEIAEVREMKQKICTMTADEYFEKHPELRKKFDDEIRNDYWGY

E5GCK9 ATP synthase subunit d, mitochondrial

1.4e-87

100

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Query:  MSGTVKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSALQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEIPKFVDTVTPQYK
        MSGTVKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSALQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEIPKFVDTVTPQYK
Subjt:  MSGTVKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSALQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEIPKFVDTVTPQYK

Query:  PKFDALLVELKEAEEKSLKESERLEKEIAEVREMKQKICTMTADEYFEKHPELRKKFDDEIRNDYWGY
        PKFDALLVELKEAEEKSLKESERLEKEIAEVREMKQKICTMTADEYFEKHPELRKKFDDEIRNDYWGY
Subjt:  PKFDALLVELKEAEEKSLKESERLEKEIAEVREMKQKICTMTADEYFEKHPELRKKFDDEIRNDYWGY

SwissProt top hits

e value

%identity

Alignment

Q9FT52 ATP synthase subunit d, mitochondrial

4.6e-75

81.55

Show/hide

Query:  MSGTVKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSALQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEIPKFVDTVTPQYK
        MSG  KK+ DVAFKAS+ IDWDGMAK+LV+DEAR+EFS+LRRAF+EVN+ LQTKFSQEPEPIDW+YYRKGIG+ +VD YKEAYDSIEIPK+VD VTP+YK
Subjt:  MSGTVKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSALQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEIPKFVDTVTPQYK

Query:  PKFDALLVELKEAEEKSLKESERLEKEIAEVREMKQKICTMTADEYFEKHPELRKKFDDEIRNDYWGY
        PKFDALLVELKEAE+KSLKESERLEKEIA+V+E+ +K+ TMTADEYFEKHPEL+KKFDDEIRND WGY
Subjt:  PKFDALLVELKEAEEKSLKESERLEKEIAEVREMKQKICTMTADEYFEKHPELRKKFDDEIRNDYWGY

Arabidopsis top hits

e value

%identity

Alignment

AT3G52300.1 ATP synthase D chain, mitochondrial

3.2e-76

81.55

Show/hide

Query:  MSGTVKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSALQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEIPKFVDTVTPQYK
        MSG  KK+ DVAFKAS+ IDWDGMAK+LV+DEAR+EFS+LRRAF+EVN+ LQTKFSQEPEPIDW+YYRKGIG+ +VD YKEAYDSIEIPK+VD VTP+YK
Subjt:  MSGTVKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSALQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEIPKFVDTVTPQYK

Query:  PKFDALLVELKEAEEKSLKESERLEKEIAEVREMKQKICTMTADEYFEKHPELRKKFDDEIRNDYWGY
        PKFDALLVELKEAE+KSLKESERLEKEIA+V+E+ +K+ TMTADEYFEKHPEL+KKFDDEIRND WGY
Subjt:  PKFDALLVELKEAEEKSLKESERLEKEIAEVREMKQKICTMTADEYFEKHPELRKKFDDEIRNDYWGY

AT3G52300.2 ATP synthase D chain, mitochondrial

9.2e-47

78.7

Show/hide

Query:  MSGTVKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSALQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEIPKFVDTVTPQYK
        MSG  KK+ DVAFKAS+ IDWDGMAK+LV+DEAR+EFS+LRRAF+EVN+ LQTKFSQEPEPIDW+YYRKGIG+ +VD YKEAYDSIEIPK+VD VTP+YK
Subjt:  MSGTVKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSALQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEIPKFVDTVTPQYK

Query:  PKFDALLV
        PKFDAL++
Subjt:  PKFDALLV

Sequences

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CDS sequence

Show/hide CDS sequence

ATGAGCGGCACGGTCAAGAAAGTCACCGATGTTGCCTTCAAGGCATCAAAGAATATCGATTGGGATGGCATGGCCAAGCTTTTGGTCTCCGATGAAGCTCGCAAGGAGTT
CTCATCCCTTCGCCGAGCCTTCGAGGAGGTTAACTCAGCCCTCCAGACTAAATTCAGCCAGGAACCAGAGCCCATAGACTGGGAATATTACAGAAAGGGAATTGGTTCCC
GCTTGGTGGACATGTACAAAGAGGCTTATGACAGCATTGAGATCCCCAAGTTTGTAGACACAGTGACTCCACAGTACAAGCCTAAATTTGATGCATTGCTGGTAGAATTG
AAGGAAGCTGAAGAAAAATCCCTAAAGGAGTCTGAGCGGTTGGAGAAGGAGATTGCTGAAGTTCGAGAAATGAAGCAAAAGATCTGCACCATGACTGCTGATGAATACTT
CGAGAAGCATCCCGAGCTGAGGAAGAAGTTTGACGATGAAATCCGAAATGACTACTGGGGCTATTGA

mRNA sequence

Show/hide mRNA sequence

GAGGGAGAGAAGGAGGCGGAGATTCTGAACGAGTCATTTTGAGGCAAAAGGCAGTAGAACAATAGACGCCGATATCTGTGTTTTGAGCTCTCAACGAAGGGAAATCAGTT
GCCTTTCTCATTCATTCTCTTTTTCTTCTTCTTTCCTTTGCTGAAATCCGAGAGACAACAGTTTAGAAAATGAGCGGCACGGTCAAGAAAGTCACCGATGTTGCCTTCAA
GGCATCAAAGAATATCGATTGGGATGGCATGGCCAAGCTTTTGGTCTCCGATGAAGCTCGCAAGGAGTTCTCATCCCTTCGCCGAGCCTTCGAGGAGGTTAACTCAGCCC
TCCAGACTAAATTCAGCCAGGAACCAGAGCCCATAGACTGGGAATATTACAGAAAGGGAATTGGTTCCCGCTTGGTGGACATGTACAAAGAGGCTTATGACAGCATTGAG
ATCCCCAAGTTTGTAGACACAGTGACTCCACAGTACAAGCCTAAATTTGATGCATTGCTGGTAGAATTGAAGGAAGCTGAAGAAAAATCCCTAAAGGAGTCTGAGCGGTT
GGAGAAGGAGATTGCTGAAGTTCGAGAAATGAAGCAAAAGATCTGCACCATGACTGCTGATGAATACTTCGAGAAGCATCCCGAGCTGAGGAAGAAGTTTGACGATGAAA
TCCGAAATGACTACTGGGGCTATTGATTTGGAAGTAAAGGTTGAAGCCACCAAAGTTTCAGAATTTAATTTCATGAATCTTCCGGGACTTGTTTTGCTGCAGATGTTTTG
TCAGTAATAAAACAAACCAGATAGTTCCTCCGCAATTTGGTTGCATTTGCTTTCAGAATCATGGTGACGAAATTGATTAGAGAAACTGAGTTTTTTTCCTTGAAATGATA
TTTTGTGAGAGTTCCAAATAACTCTCAAGGTACATTATCATGGAGAATACATTTCTTTTTATAATAAGATTATATTGGCTTCCTTATTATTCTGAGATCGATAAAGAGAT
GTTGCAAAGCTTTAAATTCATGG

Protein sequence

Show/hide protein sequence

MSGTVKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSALQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDSIEIPKFVDTVTPQYKPKFDALLVEL
KEAEEKSLKESERLEKEIAEVREMKQKICTMTADEYFEKHPELRKKFDDEIRNDYWGY

Cmc10g0263281 (gene) of Melon (Charmono) v1.1 genome