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Cmc10g0265541 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc10g0265541
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionMediator of RNA polymerase II transcription subunit 12-like isoform X1
Genome locationCMiso1.1chr10:1883320..1883736
RNA-Seq ExpressionCmc10g0265541
SyntenyCmc10g0265541
Gene Ontology termsGO:0010073 - meristem maintenance (biological process)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036767.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]1.6e-5497.2Show/hide
Query:  MRWHNRRKFTATGPPIEQFDMDVTQEYINWYKNISKLYITQPGAAMSHLRSNNIRLRNVADDPQQVLNICNDNEQYMENIHYMYDVPIVPASVQRRRPLV
        MRWHNRR+FTATGPPIEQFDMDVTQEYI+WYKNISKLYITQPGAAMSHLRSNNIRLRNVADDPQQVLNICNDNEQYMENIHYMYDVPIVPA VQRRRPLV
Subjt:  MRWHNRRKFTATGPPIEQFDMDVTQEYINWYKNISKLYITQPGAAMSHLRSNNIRLRNVADDPQQVLNICNDNEQYMENIHYMYDVPIVPASVQRRRPLV

Query:  QEPDQLE
        QEPDQLE
Subjt:  QEPDQLE

KAA0067080.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]1.2e-5497.2Show/hide
Query:  MRWHNRRKFTATGPPIEQFDMDVTQEYINWYKNISKLYITQPGAAMSHLRSNNIRLRNVADDPQQVLNICNDNEQYMENIHYMYDVPIVPASVQRRRPLV
        MRWHNRR+FTATGPPIEQFDMDVTQEYINWYKNISKLYITQPGA MSHLRSNNIRLRNVADDPQQVLNICNDNEQYMENIHYMYDVPIVPA VQRRRPLV
Subjt:  MRWHNRRKFTATGPPIEQFDMDVTQEYINWYKNISKLYITQPGAAMSHLRSNNIRLRNVADDPQQVLNICNDNEQYMENIHYMYDVPIVPASVQRRRPLV

Query:  QEPDQLE
        QEPDQLE
Subjt:  QEPDQLE

TYJ95836.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]1.6e-5497.2Show/hide
Query:  MRWHNRRKFTATGPPIEQFDMDVTQEYINWYKNISKLYITQPGAAMSHLRSNNIRLRNVADDPQQVLNICNDNEQYMENIHYMYDVPIVPASVQRRRPLV
        MRWHNRR+FTATGPPIEQFDMDVTQEYI+WYKNISKLYITQPGAAMSHLRSNNIRLRNVADDPQQVLNICNDNEQYMENIHYMYDVPIVPA VQRRRPLV
Subjt:  MRWHNRRKFTATGPPIEQFDMDVTQEYINWYKNISKLYITQPGAAMSHLRSNNIRLRNVADDPQQVLNICNDNEQYMENIHYMYDVPIVPASVQRRRPLV

Query:  QEPDQLE
        QEPDQLE
Subjt:  QEPDQLE

TYK27427.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]6.8e-5394.39Show/hide
Query:  MRWHNRRKFTATGPPIEQFDMDVTQEYINWYKNISKLYITQPGAAMSHLRSNNIRLRNVADDPQQVLNICNDNEQYMENIHYMYDVPIVPASVQRRRPLV
        MRWHNRR+FTATGPPIEQFDMDVTQEYI+WYKNISKLYITQPGAAMSHLRSNN RLRN+ADDPQQVLNICNDNEQYMENIHYMYDVPIVPA VQRRRPLV
Subjt:  MRWHNRRKFTATGPPIEQFDMDVTQEYINWYKNISKLYITQPGAAMSHLRSNNIRLRNVADDPQQVLNICNDNEQYMENIHYMYDVPIVPASVQRRRPLV

Query:  QEPDQLE
        QE DQLE
Subjt:  QEPDQLE

XP_008449513.1 PREDICTED: mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo]6.8e-5394.39Show/hide
Query:  MRWHNRRKFTATGPPIEQFDMDVTQEYINWYKNISKLYITQPGAAMSHLRSNNIRLRNVADDPQQVLNICNDNEQYMENIHYMYDVPIVPASVQRRRPLV
        MRWHNRR+FTATGPPIEQFDMDVTQEYI+WYKNISKLYITQPGAAMSHLRSNN RLRN+ADDPQQVLNICNDNEQYMENIHYMYDVPIVPA VQRRRPLV
Subjt:  MRWHNRRKFTATGPPIEQFDMDVTQEYINWYKNISKLYITQPGAAMSHLRSNNIRLRNVADDPQQVLNICNDNEQYMENIHYMYDVPIVPASVQRRRPLV

Query:  QEPDQLE
        QE DQLE
Subjt:  QEPDQLE

TrEMBL top hitse value%identityAlignment
A0A1S3BLK4 mediator of RNA polymerase II transcription subunit 12-like isoform X13.3e-5394.39Show/hide
Query:  MRWHNRRKFTATGPPIEQFDMDVTQEYINWYKNISKLYITQPGAAMSHLRSNNIRLRNVADDPQQVLNICNDNEQYMENIHYMYDVPIVPASVQRRRPLV
        MRWHNRR+FTATGPPIEQFDMDVTQEYI+WYKNISKLYITQPGAAMSHLRSNN RLRN+ADDPQQVLNICNDNEQYMENIHYMYDVPIVPA VQRRRPLV
Subjt:  MRWHNRRKFTATGPPIEQFDMDVTQEYINWYKNISKLYITQPGAAMSHLRSNNIRLRNVADDPQQVLNICNDNEQYMENIHYMYDVPIVPASVQRRRPLV

Query:  QEPDQLE
        QE DQLE
Subjt:  QEPDQLE

A0A5A7T598 Serine/threonine-protein phosphatase 7 long form-like protein7.9e-5597.2Show/hide
Query:  MRWHNRRKFTATGPPIEQFDMDVTQEYINWYKNISKLYITQPGAAMSHLRSNNIRLRNVADDPQQVLNICNDNEQYMENIHYMYDVPIVPASVQRRRPLV
        MRWHNRR+FTATGPPIEQFDMDVTQEYI+WYKNISKLYITQPGAAMSHLRSNNIRLRNVADDPQQVLNICNDNEQYMENIHYMYDVPIVPA VQRRRPLV
Subjt:  MRWHNRRKFTATGPPIEQFDMDVTQEYINWYKNISKLYITQPGAAMSHLRSNNIRLRNVADDPQQVLNICNDNEQYMENIHYMYDVPIVPASVQRRRPLV

Query:  QEPDQLE
        QEPDQLE
Subjt:  QEPDQLE

A0A5A7VIP6 Mediator of RNA polymerase II transcription subunit 12-like isoform X16.0e-5597.2Show/hide
Query:  MRWHNRRKFTATGPPIEQFDMDVTQEYINWYKNISKLYITQPGAAMSHLRSNNIRLRNVADDPQQVLNICNDNEQYMENIHYMYDVPIVPASVQRRRPLV
        MRWHNRR+FTATGPPIEQFDMDVTQEYINWYKNISKLYITQPGA MSHLRSNNIRLRNVADDPQQVLNICNDNEQYMENIHYMYDVPIVPA VQRRRPLV
Subjt:  MRWHNRRKFTATGPPIEQFDMDVTQEYINWYKNISKLYITQPGAAMSHLRSNNIRLRNVADDPQQVLNICNDNEQYMENIHYMYDVPIVPASVQRRRPLV

Query:  QEPDQLE
        QEPDQLE
Subjt:  QEPDQLE

A0A5D3BAB0 Serine/threonine-protein phosphatase 7 long form-like protein7.9e-5597.2Show/hide
Query:  MRWHNRRKFTATGPPIEQFDMDVTQEYINWYKNISKLYITQPGAAMSHLRSNNIRLRNVADDPQQVLNICNDNEQYMENIHYMYDVPIVPASVQRRRPLV
        MRWHNRR+FTATGPPIEQFDMDVTQEYI+WYKNISKLYITQPGAAMSHLRSNNIRLRNVADDPQQVLNICNDNEQYMENIHYMYDVPIVPA VQRRRPLV
Subjt:  MRWHNRRKFTATGPPIEQFDMDVTQEYINWYKNISKLYITQPGAAMSHLRSNNIRLRNVADDPQQVLNICNDNEQYMENIHYMYDVPIVPASVQRRRPLV

Query:  QEPDQLE
        QEPDQLE
Subjt:  QEPDQLE

A0A5D3DUI1 Mediator of RNA polymerase II transcription subunit 12-like isoform X13.3e-5394.39Show/hide
Query:  MRWHNRRKFTATGPPIEQFDMDVTQEYINWYKNISKLYITQPGAAMSHLRSNNIRLRNVADDPQQVLNICNDNEQYMENIHYMYDVPIVPASVQRRRPLV
        MRWHNRR+FTATGPPIEQFDMDVTQEYI+WYKNISKLYITQPGAAMSHLRSNN RLRN+ADDPQQVLNICNDNEQYMENIHYMYDVPIVPA VQRRRPLV
Subjt:  MRWHNRRKFTATGPPIEQFDMDVTQEYINWYKNISKLYITQPGAAMSHLRSNNIRLRNVADDPQQVLNICNDNEQYMENIHYMYDVPIVPASVQRRRPLV

Query:  QEPDQLE
        QE DQLE
Subjt:  QEPDQLE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGATGGCATAATCGCAGAAAGTTTACTGCTACGGGACCTCCAATTGAGCAGTTTGATATGGATGTAACTCAAGAATACATCAATTGGTACAAAAACATTAGCAAGCT
CTATATCACCCAACCGGGAGCTGCTATGAGTCATCTGAGATCAAACAATATTAGACTTCGGAATGTTGCAGATGATCCACAACAGGTTCTAAATATATGCAACGATAACG
AGCAGTATATGGAGAACATCCACTATATGTACGATGTCCCTATTGTACCTGCTTCTGTTCAGAGGAGACGTCCTCTAGTGCAAGAGCCCGATCAATTGGAAAGAAGTTGA
mRNA sequenceShow/hide mRNA sequence
TTTAGTGATGCGATGGCATAATCGCAGAAAGTTTACTGCTACGGGACCTCCAATTGAGCAGTTTGATATGGATGTAACTCAAGAATACATCAATTGGTACAAAAACATTA
GCAAGCTCTATATCACCCAACCGGGAGCTGCTATGAGTCATCTGAGATCAAACAATATTAGACTTCGGAATGTTGCAGATGATCCACAACAGGTTCTAAATATATGCAAC
GATAACGAGCAGTATATGGAGAACATCCACTATATGTACGATGTCCCTATTGTACCTGCTTCTGTTCAGAGGAGACGTCCTCTAGTGCAAGAGCCCGATCAATTGGAAAG
AAGTTGA
Protein sequenceShow/hide protein sequence
MRWHNRRKFTATGPPIEQFDMDVTQEYINWYKNISKLYITQPGAAMSHLRSNNIRLRNVADDPQQVLNICNDNEQYMENIHYMYDVPIVPASVQRRRPLVQEPDQLERS