; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc10g0274841 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc10g0274841
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionRetrovirus-related Pol polyprotein from transposon RE1
Genome locationCMiso1.1chr10:8636662..8637402
RNA-Seq ExpressionCmc10g0274841
SyntenyCmc10g0274841
Gene Ontology termsNA
InterPro domainsIPR013103 - Reverse transcriptase, RNA-dependent DNA polymerase
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0026101.1 putative mitochondrial protein [Cucumis melo var. makuwa]6.6e-10482.85Show/hide
Query:  MVAKGFHQYLGVDFFETFSHVVKASTIIVVLSIVVTNGWPLRQLDFNNAFLNGHLEENVYMMQPPGYVNHFYPNYVYKLNKAIYGLKQARRAWNATMSKE
        MVAKGFHQ+ GVDFFETFS V+KASTI VVLSI VTNGWPLRQLDFNNAFLNGHLEENVYMMQPPGYV+  YP YV KLNKAIYGLKQA  AWNAT+SKE
Subjt:  MVAKGFHQYLGVDFFETFSHVVKASTIIVVLSIVVTNGWPLRQLDFNNAFLNGHLEENVYMMQPPGYVNHFYPNYVYKLNKAIYGLKQARRAWNATMSKE

Query:  LLKWGFINSWSDSSFLIFRRINSVVLLLVYVNDILVIGYNFVLINTLIKSLDKQFALKDLGRLTYFLGFLVNYIESGFILNQEKYVSDLLHKLQLNGLKP
        LLKW FINS SDSS  IFRR NSVVLLLVYV+DI+V   + VLI+TLIKSLDKQFALKDLGRLTYFLGF VNY++SGFILNQEKY+SDLLHKLQL+ LKP
Subjt:  LLKWGFINSWSDSSFLIFRRINSVVLLLVYVNDILVIGYNFVLINTLIKSLDKQFALKDLGRLTYFLGFLVNYIESGFILNQEKYVSDLLHKLQLNGLKP

Query:  VPSPSVVGKNLSIFCGTPLEDPFIYHSTIGALQYLMNTK
         PSPSVVGKNLS F GTPLEDPF+Y STIGALQ L NT+
Subjt:  VPSPSVVGKNLSIFCGTPLEDPFIYHSTIGALQYLMNTK

KAA0045871.1 putative mitochondrial protein [Cucumis melo var. makuwa]3.0e-8067.36Show/hide
Query:  MVAKGFHQYLGVDFFETFSHVVKASTIIVVLSIVVTNGWPLRQLDFNNAFLNGHLEENVYMMQPPGYVNHFYPNYVYKLNKAIYGLKQARRAWNATMSKE
        +VAKGFHQ   VDFFETFS VVKA+TI +VLS+VV+  W LRQLDF+NAFLNG L E+VYM+Q  GYVN  +PNYV KLN AIYGLKQA RAWN  ++ E
Subjt:  MVAKGFHQYLGVDFFETFSHVVKASTIIVVLSIVVTNGWPLRQLDFNNAFLNGHLEENVYMMQPPGYVNHFYPNYVYKLNKAIYGLKQARRAWNATMSKE

Query:  LLKWGFINSWSDSSFLIFRRINSVVLLLVYVNDILVIGYNFVLINTLIKSLDKQFALKDLGRLTYFLGFLVNYIESGFILNQEKYVSDLLHKLQLNGLKP
        LLK GFINS S+SS  IFR+ N V+L LVYV+D++V G N V I  LI  LD +FALKDLG L YFLGF ++Y+ES FI+N+EKYV  LLHK QL  LKP
Subjt:  LLKWGFINSWSDSSFLIFRRINSVVLLLVYVNDILVIGYNFVLINTLIKSLDKQFALKDLGRLTYFLGFLVNYIESGFILNQEKYVSDLLHKLQLNGLKP

Query:  VPSPSVVGKNLSIFCGTPLEDPFIYHSTIGALQYLMNTK
         PSPSV+GK+LSI  G PLEDPFIY ST GALQYL NT+
Subjt:  VPSPSVVGKNLSIFCGTPLEDPFIYHSTIGALQYLMNTK

KAA0054331.1 putative mitochondrial protein [Cucumis melo var. makuwa]1.9e-8267.22Show/hide
Query:  MVAKGFHQYLGVDFFETFSHVVKASTIIVVLSIVVTNGWPLRQLDFNNAFLNGHLEENVYMMQPPGYVNHFYPNYVYKLNKAIYGLKQARRAWNATMSKE
        +VAKGFHQ   VDFFE FSHV+KASTI +VLS+ ++ GW L QLDFNNAFLNG L+E V+M QPPGYVN  YPNY+ KLNK IY LKQA RAWN T ++ 
Subjt:  MVAKGFHQYLGVDFFETFSHVVKASTIIVVLSIVVTNGWPLRQLDFNNAFLNGHLEENVYMMQPPGYVNHFYPNYVYKLNKAIYGLKQARRAWNATMSKE

Query:  LLKWGFINSWSDSSFLIFRRINSVVLLLVYVNDILVIGYNFVLINTLIKSLDKQFALKDLGRLTYFLGFLVNYIESGFILNQEKYVSDLLHKLQLNGLKP
        LL WGFINS SDS   IF    SV+LLLVYV+D++V G N  L+  LI SLDKQFALKDLG L+YFLGF VNY++ GF+LNQEKYV+DLLHKLQL+ LKP
Subjt:  LLKWGFINSWSDSSFLIFRRINSVVLLLVYVNDILVIGYNFVLINTLIKSLDKQFALKDLGRLTYFLGFLVNYIESGFILNQEKYVSDLLHKLQLNGLKP

Query:  VPSPSVVGKNLSIFCGTPLEDPFIYHSTI--GALQYLMNTK
         PS +VVGK+LS   GTP  DPFIY STI  GA+QYL +T+
Subjt:  VPSPSVVGKNLSIFCGTPLEDPFIYHSTI--GALQYLMNTK

TYK13717.1 putative mitochondrial protein [Cucumis melo var. makuwa]3.0e-8067.36Show/hide
Query:  MVAKGFHQYLGVDFFETFSHVVKASTIIVVLSIVVTNGWPLRQLDFNNAFLNGHLEENVYMMQPPGYVNHFYPNYVYKLNKAIYGLKQARRAWNATMSKE
        +VAKGFHQ   VDFFETFS VVKA+TI +VLS+VV+  W LRQLDF+NAFLNG L E+VYM+Q  GYVN  +PNYV KLN AIYGLKQA RAWN  ++ E
Subjt:  MVAKGFHQYLGVDFFETFSHVVKASTIIVVLSIVVTNGWPLRQLDFNNAFLNGHLEENVYMMQPPGYVNHFYPNYVYKLNKAIYGLKQARRAWNATMSKE

Query:  LLKWGFINSWSDSSFLIFRRINSVVLLLVYVNDILVIGYNFVLINTLIKSLDKQFALKDLGRLTYFLGFLVNYIESGFILNQEKYVSDLLHKLQLNGLKP
        LLK GFINS S+SS  IFR+ N V+L LVYV+D++V G N V I  LI  LD +FALKDLG L YFLGF ++Y+ES FI+N+EKYV  LLHK QL  LKP
Subjt:  LLKWGFINSWSDSSFLIFRRINSVVLLLVYVNDILVIGYNFVLINTLIKSLDKQFALKDLGRLTYFLGFLVNYIESGFILNQEKYVSDLLHKLQLNGLKP

Query:  VPSPSVVGKNLSIFCGTPLEDPFIYHSTIGALQYLMNTK
         PSPSV+GK+LSI  G PLEDPFIY ST GALQYL NT+
Subjt:  VPSPSVVGKNLSIFCGTPLEDPFIYHSTIGALQYLMNTK

XP_016902198.1 PREDICTED: uncharacterized mitochondrial protein AtMg00810-like isoform X2 [Cucumis melo]1.3e-10483.26Show/hide
Query:  MVAKGFHQYLGVDFFETFSHVVKASTIIVVLSIVVTNGWPLRQLDFNNAFLNGHLEENVYMMQPPGYVNHFYPNYVYKLNKAIYGLKQARRAWNATMSKE
        MVAKGFHQ+ GVDFFETFS V+KASTI VVLSI V NGWPLRQLDFNNAFLNGHLEENVYM QPPGYV+  YPNYV KLNKAIYGLKQA   WNAT+SKE
Subjt:  MVAKGFHQYLGVDFFETFSHVVKASTIIVVLSIVVTNGWPLRQLDFNNAFLNGHLEENVYMMQPPGYVNHFYPNYVYKLNKAIYGLKQARRAWNATMSKE

Query:  LLKWGFINSWSDSSFLIFRRINSVVLLLVYVNDILVIGYNFVLINTLIKSLDKQFALKDLGRLTYFLGFLVNYIESGFILNQEKYVSDLLHKLQLNGLKP
        LLKWGFINS SDSS  IFRR NSVVLLLVYV+DI+V G + VLI+TLIKSLDKQFALKDLGRLTYFLGF VNY+ESGFILNQEKY+SDLLHKLQL+ LKP
Subjt:  LLKWGFINSWSDSSFLIFRRINSVVLLLVYVNDILVIGYNFVLINTLIKSLDKQFALKDLGRLTYFLGFLVNYIESGFILNQEKYVSDLLHKLQLNGLKP

Query:  VPSPSVVGKNLSIFCGTPLEDPFIYHSTIGALQYLMNTK
         PSPSVVGKNLS F GTPLEDPF+Y STIGALQ L NT+
Subjt:  VPSPSVVGKNLSIFCGTPLEDPFIYHSTIGALQYLMNTK

TrEMBL top hitse value%identityAlignment
A0A1S4E1U4 uncharacterized mitochondrial protein AtMg00810-like isoform X26.4e-10583.26Show/hide
Query:  MVAKGFHQYLGVDFFETFSHVVKASTIIVVLSIVVTNGWPLRQLDFNNAFLNGHLEENVYMMQPPGYVNHFYPNYVYKLNKAIYGLKQARRAWNATMSKE
        MVAKGFHQ+ GVDFFETFS V+KASTI VVLSI V NGWPLRQLDFNNAFLNGHLEENVYM QPPGYV+  YPNYV KLNKAIYGLKQA   WNAT+SKE
Subjt:  MVAKGFHQYLGVDFFETFSHVVKASTIIVVLSIVVTNGWPLRQLDFNNAFLNGHLEENVYMMQPPGYVNHFYPNYVYKLNKAIYGLKQARRAWNATMSKE

Query:  LLKWGFINSWSDSSFLIFRRINSVVLLLVYVNDILVIGYNFVLINTLIKSLDKQFALKDLGRLTYFLGFLVNYIESGFILNQEKYVSDLLHKLQLNGLKP
        LLKWGFINS SDSS  IFRR NSVVLLLVYV+DI+V G + VLI+TLIKSLDKQFALKDLGRLTYFLGF VNY+ESGFILNQEKY+SDLLHKLQL+ LKP
Subjt:  LLKWGFINSWSDSSFLIFRRINSVVLLLVYVNDILVIGYNFVLINTLIKSLDKQFALKDLGRLTYFLGFLVNYIESGFILNQEKYVSDLLHKLQLNGLKP

Query:  VPSPSVVGKNLSIFCGTPLEDPFIYHSTIGALQYLMNTK
         PSPSVVGKNLS F GTPLEDPF+Y STIGALQ L NT+
Subjt:  VPSPSVVGKNLSIFCGTPLEDPFIYHSTIGALQYLMNTK

A0A5A7TWM4 Putative mitochondrial protein1.4e-8067.36Show/hide
Query:  MVAKGFHQYLGVDFFETFSHVVKASTIIVVLSIVVTNGWPLRQLDFNNAFLNGHLEENVYMMQPPGYVNHFYPNYVYKLNKAIYGLKQARRAWNATMSKE
        +VAKGFHQ   VDFFETFS VVKA+TI +VLS+VV+  W LRQLDF+NAFLNG L E+VYM+Q  GYVN  +PNYV KLN AIYGLKQA RAWN  ++ E
Subjt:  MVAKGFHQYLGVDFFETFSHVVKASTIIVVLSIVVTNGWPLRQLDFNNAFLNGHLEENVYMMQPPGYVNHFYPNYVYKLNKAIYGLKQARRAWNATMSKE

Query:  LLKWGFINSWSDSSFLIFRRINSVVLLLVYVNDILVIGYNFVLINTLIKSLDKQFALKDLGRLTYFLGFLVNYIESGFILNQEKYVSDLLHKLQLNGLKP
        LLK GFINS S+SS  IFR+ N V+L LVYV+D++V G N V I  LI  LD +FALKDLG L YFLGF ++Y+ES FI+N+EKYV  LLHK QL  LKP
Subjt:  LLKWGFINSWSDSSFLIFRRINSVVLLLVYVNDILVIGYNFVLINTLIKSLDKQFALKDLGRLTYFLGFLVNYIESGFILNQEKYVSDLLHKLQLNGLKP

Query:  VPSPSVVGKNLSIFCGTPLEDPFIYHSTIGALQYLMNTK
         PSPSV+GK+LSI  G PLEDPFIY ST GALQYL NT+
Subjt:  VPSPSVVGKNLSIFCGTPLEDPFIYHSTIGALQYLMNTK

A0A5D3B8X5 Putative mitochondrial protein3.2e-10482.85Show/hide
Query:  MVAKGFHQYLGVDFFETFSHVVKASTIIVVLSIVVTNGWPLRQLDFNNAFLNGHLEENVYMMQPPGYVNHFYPNYVYKLNKAIYGLKQARRAWNATMSKE
        MVAKGFHQ+ GVDFFETFS V+KASTI VVLSI VTNGWPLRQLDFNNAFLNGHLEENVYMMQPPGYV+  YP YV KLNKAIYGLKQA  AWNAT+SKE
Subjt:  MVAKGFHQYLGVDFFETFSHVVKASTIIVVLSIVVTNGWPLRQLDFNNAFLNGHLEENVYMMQPPGYVNHFYPNYVYKLNKAIYGLKQARRAWNATMSKE

Query:  LLKWGFINSWSDSSFLIFRRINSVVLLLVYVNDILVIGYNFVLINTLIKSLDKQFALKDLGRLTYFLGFLVNYIESGFILNQEKYVSDLLHKLQLNGLKP
        LLKW FINS SDSS  IFRR NSVVLLLVYV+DI+V   + VLI+TLIKSLDKQFALKDLGRLTYFLGF VNY++SGFILNQEKY+SDLLHKLQL+ LKP
Subjt:  LLKWGFINSWSDSSFLIFRRINSVVLLLVYVNDILVIGYNFVLINTLIKSLDKQFALKDLGRLTYFLGFLVNYIESGFILNQEKYVSDLLHKLQLNGLKP

Query:  VPSPSVVGKNLSIFCGTPLEDPFIYHSTIGALQYLMNTK
         PSPSVVGKNLS F GTPLEDPF+Y STIGALQ L NT+
Subjt:  VPSPSVVGKNLSIFCGTPLEDPFIYHSTIGALQYLMNTK

A0A5D3CKB5 Putative mitochondrial protein9.0e-8367.22Show/hide
Query:  MVAKGFHQYLGVDFFETFSHVVKASTIIVVLSIVVTNGWPLRQLDFNNAFLNGHLEENVYMMQPPGYVNHFYPNYVYKLNKAIYGLKQARRAWNATMSKE
        +VAKGFHQ   VDFFE FSHV+KASTI +VLS+ ++ GW L QLDFNNAFLNG L+E V+M QPPGYVN  YPNY+ KLNK IY LKQA RAWN T ++ 
Subjt:  MVAKGFHQYLGVDFFETFSHVVKASTIIVVLSIVVTNGWPLRQLDFNNAFLNGHLEENVYMMQPPGYVNHFYPNYVYKLNKAIYGLKQARRAWNATMSKE

Query:  LLKWGFINSWSDSSFLIFRRINSVVLLLVYVNDILVIGYNFVLINTLIKSLDKQFALKDLGRLTYFLGFLVNYIESGFILNQEKYVSDLLHKLQLNGLKP
        LL WGFINS SDS   IF    SV+LLLVYV+D++V G N  L+  LI SLDKQFALKDLG L+YFLGF VNY++ GF+LNQEKYV+DLLHKLQL+ LKP
Subjt:  LLKWGFINSWSDSSFLIFRRINSVVLLLVYVNDILVIGYNFVLINTLIKSLDKQFALKDLGRLTYFLGFLVNYIESGFILNQEKYVSDLLHKLQLNGLKP

Query:  VPSPSVVGKNLSIFCGTPLEDPFIYHSTI--GALQYLMNTK
         PS +VVGK+LS   GTP  DPFIY STI  GA+QYL +T+
Subjt:  VPSPSVVGKNLSIFCGTPLEDPFIYHSTI--GALQYLMNTK

A0A5D3CP94 Putative mitochondrial protein1.4e-8067.36Show/hide
Query:  MVAKGFHQYLGVDFFETFSHVVKASTIIVVLSIVVTNGWPLRQLDFNNAFLNGHLEENVYMMQPPGYVNHFYPNYVYKLNKAIYGLKQARRAWNATMSKE
        +VAKGFHQ   VDFFETFS VVKA+TI +VLS+VV+  W LRQLDF+NAFLNG L E+VYM+Q  GYVN  +PNYV KLN AIYGLKQA RAWN  ++ E
Subjt:  MVAKGFHQYLGVDFFETFSHVVKASTIIVVLSIVVTNGWPLRQLDFNNAFLNGHLEENVYMMQPPGYVNHFYPNYVYKLNKAIYGLKQARRAWNATMSKE

Query:  LLKWGFINSWSDSSFLIFRRINSVVLLLVYVNDILVIGYNFVLINTLIKSLDKQFALKDLGRLTYFLGFLVNYIESGFILNQEKYVSDLLHKLQLNGLKP
        LLK GFINS S+SS  IFR+ N V+L LVYV+D++V G N V I  LI  LD +FALKDLG L YFLGF ++Y+ES FI+N+EKYV  LLHK QL  LKP
Subjt:  LLKWGFINSWSDSSFLIFRRINSVVLLLVYVNDILVIGYNFVLINTLIKSLDKQFALKDLGRLTYFLGFLVNYIESGFILNQEKYVSDLLHKLQLNGLKP

Query:  VPSPSVVGKNLSIFCGTPLEDPFIYHSTIGALQYLMNTK
         PSPSV+GK+LSI  G PLEDPFIY ST GALQYL NT+
Subjt:  VPSPSVVGKNLSIFCGTPLEDPFIYHSTIGALQYLMNTK

SwissProt top hitse value%identityAlignment
P04146 Copia protein1.8e-2732.92Show/hide
Query:  MVAKGFHQYLGVDFFETFSHVVKASTIIVVLSIVVTNGWPLRQLDFNNAFLNGHLEENVYMMQPPGYVNHFYPNYVYKLNKAIYGLKQARRAWNATMSKE
        +VA+GF Q   +D+ ETF+ V + S+   +LS+V+     + Q+D   AFLNG L+E +YM  P G   +   + V KLNKAIYGLKQA R W     + 
Subjt:  MVAKGFHQYLGVDFFETFSHVVKASTIIVVLSIVVTNGWPLRQLDFNNAFLNGHLEENVYMMQPPGYVNHFYPNYVYKLNKAIYGLKQARRAWNATMSKE

Query:  LLKWGFINSWSDSSFLIFRR--INSVVLLLVYVNDILVIGYNFVLINTLIKSLDKQFALKDLGRLTYFLGFLVNYIESGFILNQEKYVSDLLHKLQLNGL
        L +  F+NS  D    I  +  IN  + +L+YV+D+++   +   +N   + L ++F + DL  + +F+G  +   E    L+Q  YV  +L K  +   
Subjt:  LLKWGFINSWSDSSFLIFRR--INSVVLLLVYVNDILVIGYNFVLINTLIKSLDKQFALKDLGRLTYFLGFLVNYIESGFILNQEKYVSDLLHKLQLNGL

Query:  KPVPSPSVVGKNLSIF-----CGTPLEDPFIYHSTIGALQYLM
          V +P     N  +      C TP        S IG L Y+M
Subjt:  KPVPSPSVVGKNLSIF-----CGTPLEDPFIYHSTIGALQYLM

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-942.0e-3136.59Show/hide
Query:  MVAKGFHQYLGVDFFETFSHVVKASTIIVVLSIVVTNGWPLRQLDFNNAFLNGHLEENVYMMQPPGYVNHFYPNYVYKLNKAIYGLKQARRAWNATMSKE
        +V KGF Q  G+DF E FS VVK ++I  +LS+  +    + QLD   AFL+G LEE +YM QP G+      + V KLNK++YGLKQA R W       
Subjt:  MVAKGFHQYLGVDFFETFSHVVKASTIIVVLSIVVTNGWPLRQLDFNNAFLNGHLEENVYMMQPPGYVNHFYPNYVYKLNKAIYGLKQARRAWNATMSKE

Query:  LLKWGFINSWSDSSFLIFRRI--NSVVLLLVYVNDILVIGYNFVLINTLIKSLDKQFALKDLGRLTYFLGFLV--NYIESGFILNQEKYVSDLLHKLQLN
        +    ++ ++SD   + F+R   N+ ++LL+YV+D+L++G +  LI  L   L K F +KDLG     LG  +          L+QEKY+  +L +  + 
Subjt:  LLKWGFINSWSDSSFLIFRRI--NSVVLLLVYVNDILVIGYNFVLINTLIKSLDKQFALKDLGRLTYFLGFLV--NYIESGFILNQEKYVSDLLHKLQLN

Query:  GLKPVPSPSVVGKNLS-IFCGTPLED-----PFIYHSTIGALQYLM
          KPV +P      LS   C T +E+        Y S +G+L Y M
Subjt:  GLKPVPSPSVVGKNLS-IFCGTPLED-----PFIYHSTIGALQYLM

P25600 Putative transposon Ty5-1 protein YCL074W5.5e-2131.12Show/hide
Query:  LDFNNAFLNGHLEENVYMMQPPGYVNHFYPNYVYKLNKAIYGLKQARRAWNATMSKELLKWGFINSWSDSSFLIFRRINSVVLLLVYVNDILVIGYNFVL
        +D + AFLN  ++E +Y+ QPPG+VN   P+YV++L   +YGLKQA   WN  ++  L K GF     +         +  + + VYV+D+LV   +  +
Subjt:  LDFNNAFLNGHLEENVYMMQPPGYVNHFYPNYVYKLNKAIYGLKQARRAWNATMSKELLKWGFINSWSDSSFLIFRRINSVVLLLVYVNDILVIGYNFVL

Query:  INTLIKSLDKQFALKDLGRLTYFLGFLVNYIESGFI-LNQEKYVSDLLHKLQLNGLKPVPSPSVVGKNLSIFCGTPLEDPFIYHSTIGALQYLMNT
         + + + L K +++KDLG++  FLG  ++   +G I L+ + Y++    + ++N  K   +P    K L       L+D   Y S +G L +  NT
Subjt:  INTLIKSLDKQFALKDLGRLTYFLGFLVNYIESGFI-LNQEKYVSDLLHKLQLNGLKPVPSPSVVGKNLSIFCGTPLEDPFIYHSTIGALQYLMNT

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE12.0e-5545.61Show/hide
Query:  MVAKGFHQYLGVDFFETFSHVVKASTIIVVLSIVVTNGWPLRQLDFNNAFLNGHLEENVYMMQPPGYVNHFYPNYVYKLNKAIYGLKQARRAWNATMSKE
        +VAKG++Q  G+D+ ETFS V+K+++I +VL + V   WP+RQLD NNAFL G L ++VYM QPPG+++   PNYV KL KA+YGLKQA RAW   +   
Subjt:  MVAKGFHQYLGVDFFETFSHVVKASTIIVVLSIVVTNGWPLRQLDFNNAFLNGHLEENVYMMQPPGYVNHFYPNYVYKLNKAIYGLKQARRAWNATMSKE

Query:  LLKWGFINSWSDSSFLIFRRINSVVLLLVYVNDILVIGYNFVLINTLIKSLDKQFALKDLGRLTYFLGFLVNYIESGFILNQEKYVSDLLHKLQLNGLKP
        LL  GF+NS SD+S  + +R  S+V +LVYV+DIL+ G +  L++  + +L ++F++KD   L YFLG     + +G  L+Q +Y+ DLL +  +   KP
Subjt:  LLKWGFINSWSDSSFLIFRRINSVVLLLVYVNDILVIGYNFVLINTLIKSLDKQFALKDLGRLTYFLGFLVNYIESGFILNQEKYVSDLLHKLQLNGLKP

Query:  VPSPSVVGKNLSIFCGTPLEDPFIYHSTIGALQYLMNTK
        V +P      LS++ GT L DP  Y   +G+LQYL  T+
Subjt:  VPSPSVVGKNLSIFCGTPLEDPFIYHSTIGALQYLMNTK

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE24.2e-5344.77Show/hide
Query:  MVAKGFHQYLGVDFFETFSHVVKASTIIVVLSIVVTNGWPLRQLDFNNAFLNGHLEENVYMMQPPGYVNHFYPNYVYKLNKAIYGLKQARRAWNATMSKE
        +VAKG++Q  G+D+ ETFS V+K+++I +VL + V   WP+RQLD NNAFL G L + VYM QPPG+V+   P+YV +L KAIYGLKQA RAW   +   
Subjt:  MVAKGFHQYLGVDFFETFSHVVKASTIIVVLSIVVTNGWPLRQLDFNNAFLNGHLEENVYMMQPPGYVNHFYPNYVYKLNKAIYGLKQARRAWNATMSKE

Query:  LLKWGFINSWSDSSFLIFRRINSVVLLLVYVNDILVIGYNFVLINTLIKSLDKQFALKDLGRLTYFLGFLVNYIESGFILNQEKYVSDLLHKLQLNGLKP
        LL  GF+NS SD+S  + +R  S++ +LVYV+DIL+ G + VL+   + +L ++F++K+   L YFLG     +  G  L+Q +Y  DLL +  +   KP
Subjt:  LLKWGFINSWSDSSFLIFRRINSVVLLLVYVNDILVIGYNFVLINTLIKSLDKQFALKDLGRLTYFLGFLVNYIESGFILNQEKYVSDLLHKLQLNGLKP

Query:  VPSPSVVGKNLSIFCGTPLEDPFIYHSTIGALQYLMNTK
        V +P      L++  GT L DP  Y   +G+LQYL  T+
Subjt:  VPSPSVVGKNLSIFCGTPLEDPFIYHSTIGALQYLMNTK

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 82.1e-3939.51Show/hide
Query:  MVAKGFHQYLGVDFFETFSHVVKASTIIVVLSIVVTNGWPLRQLDFNNAFLNGHLEENVYMMQPPGYV----NHFYPNYVYKLNKAIYGLKQARRAWNAT
        +VAKG+ Q  G+DF ETFS V K +++ ++L+I     + L QLD +NAFLNG L+E +YM  PPGY     +   PN V  L K+IYGLKQA R W   
Subjt:  MVAKGFHQYLGVDFFETFSHVVKASTIIVVLSIVVTNGWPLRQLDFNNAFLNGHLEENVYMMQPPGYV----NHFYPNYVYKLNKAIYGLKQARRAWNAT

Query:  MSKELLKWGFINSWSDSSFLIFRRINSVVLLLVYVNDILVIGYNFVLINTLIKSLDKQFALKDLGRLTYFLGFLVNYIESGFILNQEKYVSDLLHKLQLN
         S  L+ +GF+ S SD ++ +       + +LVYV+DI++   N   ++ L   L   F L+DLG L YFLG  +    +G  + Q KY  DLL +  L 
Subjt:  MSKELLKWGFINSWSDSSFLIFRRINSVVLLLVYVNDILVIGYNFVLINTLIKSLDKQFALKDLGRLTYFLGFLVNYIESGFILNQEKYVSDLLHKLQLN

Query:  GLKPVPSPSVVGKNLSIFCGTPLEDPFIYHSTIGALQYLMNTK
        G KP   P       S   G    D   Y   IG L YL  T+
Subjt:  GLKPVPSPSVVGKNLSIFCGTPLEDPFIYHSTIGALQYLMNTK

ATMG00810.1 DNA/RNA polymerases superfamily protein5.2e-1438.94Show/hide
Query:  LLVYVNDILVIGYNFVLINTLIKSLDKQFALKDLGRLTYFLGFLVNYIESGFILNQEKYVSDLLHKLQLNGLKPVPSPSVVGKNLSIFCGTPLEDPFIYH
        LL+YV+DIL+ G +  L+N LI  L   F++KDLG + YFLG  +    SG  L+Q KY   +L+   +   KP+ +P  +  N S+       DP  + 
Subjt:  LLVYVNDILVIGYNFVLINTLIKSLDKQFALKDLGRLTYFLGFLVNYIESGFILNQEKYVSDLLHKLQLNGLKPVPSPSVVGKNLSIFCGTPLEDPFIYH

Query:  STIGALQYLMNTK
        S +GALQYL  T+
Subjt:  STIGALQYLMNTK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTGCCAAAGGGTTTCATCAATACCTTGGTGTGGATTTCTTTGAGACGTTCAGCCATGTCGTTAAAGCTTCAACAATCATAGTTGTTCTTAGTATCGTTGTT
ACAAATGGATGGCCACTTAGACAACTTGATTTTAACAATGCATTTTTAAATGGCCACCTTGAAGAAAATGTTTATATGATGCAGCCTCCCGGGTATGTAAATCAC
TTTTATCCAAATTATGTGTACAAGTTAAATAAAGCTATATATGGGTTGAAACAAGCCCGCCGCGCATGGAATGCTACCATGTCTAAAGAACTTTTAAAATGGGGC
TTTATAAACTCTTGGTCAGATTCCTCTTTCCTTATATTTCGAAGAATTAATTCTGTTGTTCTGTTGCTGGTGTATGTTAATGATATTTTAGTGATTGGTTATAAC
TTTGTGTTGATTAACACTCTGATTAAGTCATTGGATAAACAATTCGCGCTAAAAGATTTGGGAAGGTTGACTTATTTCTTGGGCTTTCTAGTAAACTATATTGAA
TCTGGTTTTATTCTCAACCAAGAAAAGTATGTCAGTGACCTTCTTCATAAACTTCAGCTTAATGGTTTAAAACCAGTCCCATCTCCAAGTGTTGTTGGAAAAAAT
TTATCGATTTTTTGTGGTACTCCACTTGAAGATCCTTTTATTTATCACAGCACTATTGGAGCCTTACAATACCTTATGAACACAAAGACCCGACATTGCCTATAT
TGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTTGCCAAAGGGTTTCATCAATACCTTGGTGTGGATTTCTTTGAGACGTTCAGCCATGTCGTTAAAGCTTCAACAATCATAGTTGTTCTTAGTATCGTTGTT
ACAAATGGATGGCCACTTAGACAACTTGATTTTAACAATGCATTTTTAAATGGCCACCTTGAAGAAAATGTTTATATGATGCAGCCTCCCGGGTATGTAAATCAC
TTTTATCCAAATTATGTGTACAAGTTAAATAAAGCTATATATGGGTTGAAACAAGCCCGCCGCGCATGGAATGCTACCATGTCTAAAGAACTTTTAAAATGGGGC
TTTATAAACTCTTGGTCAGATTCCTCTTTCCTTATATTTCGAAGAATTAATTCTGTTGTTCTGTTGCTGGTGTATGTTAATGATATTTTAGTGATTGGTTATAAC
TTTGTGTTGATTAACACTCTGATTAAGTCATTGGATAAACAATTCGCGCTAAAAGATTTGGGAAGGTTGACTTATTTCTTGGGCTTTCTAGTAAACTATATTGAA
TCTGGTTTTATTCTCAACCAAGAAAAGTATGTCAGTGACCTTCTTCATAAACTTCAGCTTAATGGTTTAAAACCAGTCCCATCTCCAAGTGTTGTTGGAAAAAAT
TTATCGATTTTTTGTGGTACTCCACTTGAAGATCCTTTTATTTATCACAGCACTATTGGAGCCTTACAATACCTTATGAACACAAAGACCCGACATTGCCTATAT
TGTTAA
Protein sequenceShow/hide protein sequence
MVAKGFHQYLGVDFFETFSHVVKASTIIVVLSIVVTNGWPLRQLDFNNAFLNGHLEENVYMMQPPGYVNHFYPNYVYKLNKAIYGLKQARRAWNATMSKELLKWG
FINSWSDSSFLIFRRINSVVLLLVYVNDILVIGYNFVLINTLIKSLDKQFALKDLGRLTYFLGFLVNYIESGFILNQEKYVSDLLHKLQLNGLKPVPSPSVVGKN
LSIFCGTPLEDPFIYHSTIGALQYLMNTKTRHCLYC