; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc10g0276191 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc10g0276191
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionRetrovirus-related Pol polyprotein from transposon RE1
Genome locationCMiso1.1chr10:10908682..10909459
RNA-Seq ExpressionCmc10g0276191
SyntenyCmc10g0276191
Gene Ontology termsNA
InterPro domainsIPR013103 - Reverse transcriptase, RNA-dependent DNA polymerase
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032169.1 putative mitochondrial protein [Cucumis melo var. makuwa]1.8e-8596.93Show/hide
Query:  IEICYIEPRWLKLKLIATPMISDPILSAHQEDLFNDPYLYRSIVGALQYATLTHLEISFSVNKACQFMHSPTILHWQMVKRIIRYLKGVLSHGLGLQKSS
        I+ICYIEPRWLKLKLIATPMISDPILSAHQEDLF  PYLYRSIVGALQYATLTHLEISFSVNKACQFMH PTILHWQMVKRIIRYLKGVLSHGLGLQKSS
Subjt:  IEICYIEPRWLKLKLIATPMISDPILSAHQEDLFNDPYLYRSIVGALQYATLTHLEISFSVNKACQFMHSPTILHWQMVKRIIRYLKGVLSHGLGLQKSS

Query:  HLYLYGFADADWALDLDDRKSTYGFGVYFGGNLISWGSKKQSIISRSSTEAECCCLALVAIEM
        HLYLYGFADADWALDLDDRKSTYGFGVYFGGNLISWGSKKQ+IISRSSTEAECCCLALVAIEM
Subjt:  HLYLYGFADADWALDLDDRKSTYGFGVYFGGNLISWGSKKQSIISRSSTEAECCCLALVAIEM

KAA0045109.1 putative mitochondrial protein [Cucumis melo var. makuwa]1.3e-6759.66Show/hide
Query:  IGSSSIFLDGLIKSLNSTFVFKDLGKLNYFLGIEICY------------------IEPRWLKLKLIATPMISDPILSAHQEDLFNDPYLYRSIVGALQYA
        +G+S   L+ LI++LNS F  KDLG L+YFLG+E+ Y                   + +    K I+TPM+S  ++SAHQ + F+D +LYR  VGALQYA
Subjt:  IGSSSIFLDGLIKSLNSTFVFKDLGKLNYFLGIEICY------------------IEPRWLKLKLIATPMISDPILSAHQEDLFNDPYLYRSIVGALQYA

Query:  TLTHLEISFSVNKACQFMHSPTILHWQMVKRIIRYLKGVLSHGLGLQKSSHLYLYGFADADWALDLDDRKSTYGFGVYFGGNLISWGSKKQSIISRSSTE
        TLTH EIS+SVNKACQFMHSP ++HWQ+VKRI+RYLKG LSHGL L+ S++L L GFADADWA D DDRKST G+ VYFG NL+SWGSKKQSII RSSTE
Subjt:  TLTHLEISFSVNKACQFMHSPTILHWQMVKRIIRYLKGVLSHGLGLQKSSHLYLYGFADADWALDLDDRKSTYGFGVYFGGNLISWGSKKQSIISRSSTE

Query:  AECCCLALVAIEMVWIHSLLTNFNIILHHPPVL
        AE  CLAL+A E+VWI+SLL +  I L  PPVL
Subjt:  AECCCLALVAIEMVWIHSLLTNFNIILHHPPVL

KAA0052371.1 putative mitochondrial protein [Cucumis melo var. makuwa]1.4e-7460.39Show/hide
Query:  LLVKTTSVAYCYILIYVDDIIVIGSSSIFLDGLIKSLNSTFVFKDLGKLNYFLGIEICY------------------IEPRWLKLKLIATPMISDPILSA
        LL++ T  + CY LIYVDD+I++GSS   ++ L+ SLNS F  KDLGKL+YFLG+E+ Y                     + L  K I+TPM+S P+LSA
Subjt:  LLVKTTSVAYCYILIYVDDIIVIGSSSIFLDGLIKSLNSTFVFKDLGKLNYFLGIEICY------------------IEPRWLKLKLIATPMISDPILSA

Query:  HQEDLFNDPYLYRSIVGALQYATLTHLEISFSVNKACQFMHSPTILHWQMVKRIIRYLKGVLSHGLGLQKSSHLYLYGFADADWALDLDDRKSTYGFGVY
         Q + F+D +L RS+VGALQYATLTH EIS+SVNKACQFMH+P   HWQ+VKRI+RYLKGVL HGL L KS +  L GFADADWA D DDRKST G  VY
Subjt:  HQEDLFNDPYLYRSIVGALQYATLTHLEISFSVNKACQFMHSPTILHWQMVKRIIRYLKGVLSHGLGLQKSSHLYLYGFADADWALDLDDRKSTYGFGVY

Query:  FGGNLISWGSKKQSIISRSSTEAECCCLALVAIEMVWIHSLLTNFNIILHHPPVL
        FG NL+SWGSKKQSIISRSSTEAE  CLAL+A EMVWI SLL +  I L  PP+L
Subjt:  FGGNLISWGSKKQSIISRSSTEAECCCLALVAIEMVWIHSLLTNFNIILHHPPVL

KAA0057506.1 putative mitochondrial protein [Cucumis melo var. makuwa]3.1e-6657.5Show/hide
Query:  YVDDIIVIGSSSIFLDGLIKSLNSTFVFKDLGKLNYFLGIEIC-------------YIEPRWLKLKL-----IATPMISDPILSAHQEDLFNDPYLYRSI
        YVDD+I++G S   L+ LI++LNS F  KDLG L+YFLG+E+              YI     K+K+     I+TPM+S  ++SAH  + F+D  LYRS 
Subjt:  YVDDIIVIGSSSIFLDGLIKSLNSTFVFKDLGKLNYFLGIEIC-------------YIEPRWLKLKL-----IATPMISDPILSAHQEDLFNDPYLYRSI

Query:  VGALQYATLTHLEISFSVNKACQFMHSPTILHWQMVKRIIRYLKGVLSHGLGLQKSSHLYLYGFADADWALDLDDRKSTYGFGVYFGGNLISWGSKKQSI
        V ALQYATLTH  IS++VNKACQFMHSP ++HWQ+VKRI+RYLKG LSHGL L+ S++L + GFA+ DWA D DDRKS +G+ VYFG NL+SWGSKKQSI
Subjt:  VGALQYATLTHLEISFSVNKACQFMHSPTILHWQMVKRIIRYLKGVLSHGLGLQKSSHLYLYGFADADWALDLDDRKSTYGFGVYFGGNLISWGSKKQSI

Query:  ISRSSTEAECCCLALVAIEMVWIHSLLTNFNIILHHPPVL
        ISRSST+ E  CLAL+A E VWI+SLL +  I L  PPVL
Subjt:  ISRSSTEAECCCLALVAIEMVWIHSLLTNFNIILHHPPVL

XP_016903397.1 PREDICTED: uncharacterized mitochondrial protein AtMg00810-like [Cucumis melo]4.5e-6557.94Show/hide
Query:  IGSSSIFLDGLIKSLNSTFVFKDLGKLNYFLGIEICY------------------IEPRWLKLKLIATPMISDPILSAHQEDLFNDPYLYRSIVGALQYA
        +G+S  +++ L+ SLNS F  KDLGKL+YFL +E+ Y                     + L  K I+T M+S P+LSA Q +LF+D +LYRSIVGALQYA
Subjt:  IGSSSIFLDGLIKSLNSTFVFKDLGKLNYFLGIEICY------------------IEPRWLKLKLIATPMISDPILSAHQEDLFNDPYLYRSIVGALQYA

Query:  TLTHLEISFSVNKACQFMHSPTILHWQMVKRIIRYLKGVLSHGLGLQKSSHLYLYGFADADWALDLDDRKSTYGFGVYFGGNLISWGSKKQSIISRSSTE
        TLTH EIS+SVNKACQF+H+P   HWQ+VK+I+RYLKGVL H L L KS ++ L GF DADWA D DDRKST GF VYFG NL+SWGSKKQSII RSST+
Subjt:  TLTHLEISFSVNKACQFMHSPTILHWQMVKRIIRYLKGVLSHGLGLQKSSHLYLYGFADADWALDLDDRKSTYGFGVYFGGNLISWGSKKQSIISRSSTE

Query:  AECCCLALVAIEMVWIHSLLTNFNIILHHPPVL
        AE  CL L+A E+VWI SLL +  I L  PP+L
Subjt:  AECCCLALVAIEMVWIHSLLTNFNIILHHPPVL

TrEMBL top hitse value%identityAlignment
A0A1S4E598 uncharacterized mitochondrial protein AtMg00810-like2.2e-6557.94Show/hide
Query:  IGSSSIFLDGLIKSLNSTFVFKDLGKLNYFLGIEICY------------------IEPRWLKLKLIATPMISDPILSAHQEDLFNDPYLYRSIVGALQYA
        +G+S  +++ L+ SLNS F  KDLGKL+YFL +E+ Y                     + L  K I+T M+S P+LSA Q +LF+D +LYRSIVGALQYA
Subjt:  IGSSSIFLDGLIKSLNSTFVFKDLGKLNYFLGIEICY------------------IEPRWLKLKLIATPMISDPILSAHQEDLFNDPYLYRSIVGALQYA

Query:  TLTHLEISFSVNKACQFMHSPTILHWQMVKRIIRYLKGVLSHGLGLQKSSHLYLYGFADADWALDLDDRKSTYGFGVYFGGNLISWGSKKQSIISRSSTE
        TLTH EIS+SVNKACQF+H+P   HWQ+VK+I+RYLKGVL H L L KS ++ L GF DADWA D DDRKST GF VYFG NL+SWGSKKQSII RSST+
Subjt:  TLTHLEISFSVNKACQFMHSPTILHWQMVKRIIRYLKGVLSHGLGLQKSSHLYLYGFADADWALDLDDRKSTYGFGVYFGGNLISWGSKKQSIISRSSTE

Query:  AECCCLALVAIEMVWIHSLLTNFNIILHHPPVL
        AE  CL L+A E+VWI SLL +  I L  PP+L
Subjt:  AECCCLALVAIEMVWIHSLLTNFNIILHHPPVL

A0A5A7UFS3 Putative mitochondrial protein6.8e-7560.39Show/hide
Query:  LLVKTTSVAYCYILIYVDDIIVIGSSSIFLDGLIKSLNSTFVFKDLGKLNYFLGIEICY------------------IEPRWLKLKLIATPMISDPILSA
        LL++ T  + CY LIYVDD+I++GSS   ++ L+ SLNS F  KDLGKL+YFLG+E+ Y                     + L  K I+TPM+S P+LSA
Subjt:  LLVKTTSVAYCYILIYVDDIIVIGSSSIFLDGLIKSLNSTFVFKDLGKLNYFLGIEICY------------------IEPRWLKLKLIATPMISDPILSA

Query:  HQEDLFNDPYLYRSIVGALQYATLTHLEISFSVNKACQFMHSPTILHWQMVKRIIRYLKGVLSHGLGLQKSSHLYLYGFADADWALDLDDRKSTYGFGVY
         Q + F+D +L RS+VGALQYATLTH EIS+SVNKACQFMH+P   HWQ+VKRI+RYLKGVL HGL L KS +  L GFADADWA D DDRKST G  VY
Subjt:  HQEDLFNDPYLYRSIVGALQYATLTHLEISFSVNKACQFMHSPTILHWQMVKRIIRYLKGVLSHGLGLQKSSHLYLYGFADADWALDLDDRKSTYGFGVY

Query:  FGGNLISWGSKKQSIISRSSTEAECCCLALVAIEMVWIHSLLTNFNIILHHPPVL
        FG NL+SWGSKKQSIISRSSTEAE  CLAL+A EMVWI SLL +  I L  PP+L
Subjt:  FGGNLISWGSKKQSIISRSSTEAECCCLALVAIEMVWIHSLLTNFNIILHHPPVL

A0A5A7UTP6 Putative mitochondrial protein1.5e-6657.5Show/hide
Query:  YVDDIIVIGSSSIFLDGLIKSLNSTFVFKDLGKLNYFLGIEIC-------------YIEPRWLKLKL-----IATPMISDPILSAHQEDLFNDPYLYRSI
        YVDD+I++G S   L+ LI++LNS F  KDLG L+YFLG+E+              YI     K+K+     I+TPM+S  ++SAH  + F+D  LYRS 
Subjt:  YVDDIIVIGSSSIFLDGLIKSLNSTFVFKDLGKLNYFLGIEIC-------------YIEPRWLKLKL-----IATPMISDPILSAHQEDLFNDPYLYRSI

Query:  VGALQYATLTHLEISFSVNKACQFMHSPTILHWQMVKRIIRYLKGVLSHGLGLQKSSHLYLYGFADADWALDLDDRKSTYGFGVYFGGNLISWGSKKQSI
        V ALQYATLTH  IS++VNKACQFMHSP ++HWQ+VKRI+RYLKG LSHGL L+ S++L + GFA+ DWA D DDRKS +G+ VYFG NL+SWGSKKQSI
Subjt:  VGALQYATLTHLEISFSVNKACQFMHSPTILHWQMVKRIIRYLKGVLSHGLGLQKSSHLYLYGFADADWALDLDDRKSTYGFGVYFGGNLISWGSKKQSI

Query:  ISRSSTEAECCCLALVAIEMVWIHSLLTNFNIILHHPPVL
        ISRSST+ E  CLAL+A E VWI+SLL +  I L  PPVL
Subjt:  ISRSSTEAECCCLALVAIEMVWIHSLLTNFNIILHHPPVL

A0A5D3CTU1 Putative mitochondrial protein8.5e-8696.93Show/hide
Query:  IEICYIEPRWLKLKLIATPMISDPILSAHQEDLFNDPYLYRSIVGALQYATLTHLEISFSVNKACQFMHSPTILHWQMVKRIIRYLKGVLSHGLGLQKSS
        I+ICYIEPRWLKLKLIATPMISDPILSAHQEDLF  PYLYRSIVGALQYATLTHLEISFSVNKACQFMH PTILHWQMVKRIIRYLKGVLSHGLGLQKSS
Subjt:  IEICYIEPRWLKLKLIATPMISDPILSAHQEDLFNDPYLYRSIVGALQYATLTHLEISFSVNKACQFMHSPTILHWQMVKRIIRYLKGVLSHGLGLQKSS

Query:  HLYLYGFADADWALDLDDRKSTYGFGVYFGGNLISWGSKKQSIISRSSTEAECCCLALVAIEM
        HLYLYGFADADWALDLDDRKSTYGFGVYFGGNLISWGSKKQ+IISRSSTEAECCCLALVAIEM
Subjt:  HLYLYGFADADWALDLDDRKSTYGFGVYFGGNLISWGSKKQSIISRSSTEAECCCLALVAIEM

A0A5D3DK36 Putative mitochondrial protein6.1e-6859.66Show/hide
Query:  IGSSSIFLDGLIKSLNSTFVFKDLGKLNYFLGIEICY------------------IEPRWLKLKLIATPMISDPILSAHQEDLFNDPYLYRSIVGALQYA
        +G+S   L+ LI++LNS F  KDLG L+YFLG+E+ Y                   + +    K I+TPM+S  ++SAHQ + F+D +LYR  VGALQYA
Subjt:  IGSSSIFLDGLIKSLNSTFVFKDLGKLNYFLGIEICY------------------IEPRWLKLKLIATPMISDPILSAHQEDLFNDPYLYRSIVGALQYA

Query:  TLTHLEISFSVNKACQFMHSPTILHWQMVKRIIRYLKGVLSHGLGLQKSSHLYLYGFADADWALDLDDRKSTYGFGVYFGGNLISWGSKKQSIISRSSTE
        TLTH EIS+SVNKACQFMHSP ++HWQ+VKRI+RYLKG LSHGL L+ S++L L GFADADWA D DDRKST G+ VYFG NL+SWGSKKQSII RSSTE
Subjt:  TLTHLEISFSVNKACQFMHSPTILHWQMVKRIIRYLKGVLSHGLGLQKSSHLYLYGFADADWALDLDDRKSTYGFGVYFGGNLISWGSKKQSIISRSSTE

Query:  AECCCLALVAIEMVWIHSLLTNFNIILHHPPVL
        AE  CLAL+A E+VWI+SLL +  I L  PPVL
Subjt:  AECCCLALVAIEMVWIHSLLTNFNIILHHPPVL

SwissProt top hitse value%identityAlignment
P04146 Copia protein3.7e-2230.86Show/hide
Query:  YILIYVDDIIVIGSSSIFLDGLIKSLNSTFVFKDLGKLNYFLGIEI------------CYIEPRWLKLKLIATPMISDPILSAHQEDLFNDP----YLYR
        Y+L+YVDD+++       ++   + L   F   DL ++ +F+GI I             Y++    K  +     +S P+ S    +L N         R
Subjt:  YILIYVDDIIVIGSSSIFLDGLIKSLNSTFVFKDLGKLNYFLGIEI------------CYIEPRWLKLKLIATPMISDPILSAHQEDLFNDP----YLYR

Query:  SIVGALQYATL-THLEISFSVNKACQFMHSPTILHWQMVKRIIRYLKGVLSHGLGLQKSSHL--YLYGFADADWALDLDDRKSTYGF-GVYFGGNLISWG
        S++G L Y  L T  +++ +VN   ++        WQ +KR++RYLKG +   L  +K+      + G+ D+DWA    DRKST G+    F  NLI W 
Subjt:  SIVGALQYATL-THLEISFSVNKACQFMHSPTILHWQMVKRIIRYLKGVLSHGLGLQKSSHL--YLYGFADADWALDLDDRKSTYGF-GVYFGGNLISWG

Query:  SKKQSIISRSSTEAECCCLALVAIEMVWIHSLLTNFNIILHHP
        +K+Q+ ++ SSTEAE   L     E +W+  LLT+ NI L +P
Subjt:  SKKQSIISRSSTEAECCCLALVAIEMVWIHSLLTNFNIILHHP

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-941.9e-2131.3Show/hide
Query:  YCYILIYVDDIIVIGSSSIFLDGLIKSLNSTFVFKDLGKLNYFLGIEIC--------------YIEP-----RWLKLKLIATPM-----ISDPILSAHQE
        +  +L+YVDD++++G     +  L   L+ +F  KDLG     LG++I               YIE           K ++TP+     +S  +     E
Subjt:  YCYILIYVDDIIVIGSSSIFLDGLIKSLNSTFVFKDLGKLNYFLGIEIC--------------YIEP-----RWLKLKLIATPM-----ISDPILSAHQE

Query:  DLFNDPYL-YRSIVGALQYATL-THLEISFSVNKACQFMHSPTILHWQMVKRIIRYLKGVLSHGLGLQKSSHLYLYGFADADWALDLDDRKSTYGFGVYF
        +  N   + Y S VG+L YA + T  +I+ +V    +F+ +P   HW+ VK I+RYL+G     L    S  + L G+ DAD A D+D+RKS+ G+   F
Subjt:  DLFNDPYL-YRSIVGALQYATL-THLEISFSVNKACQFMHSPTILHWQMVKRIIRYLKGVLSHGLGLQKSSHLYLYGFADADWALDLDDRKSTYGFGVYF

Query:  GGNLISWGSKKQSIISRSSTEAECCCLALVAIEMVWIHSLLTNFNI
         G  ISW SK Q  ++ S+TEAE         EM+W+   L    +
Subjt:  GGNLISWGSKKQSIISRSSTEAECCCLALVAIEMVWIHSLLTNFNI

P92519 Uncharacterized mitochondrial protein AtMg008101.5e-4244.44Show/hide
Query:  YILIYVDDIIVIGSSSIFLDGLIKSLNSTFVFKDLGKLNYFLGIEI------------CYIE-----PRWLKLKLIATPMISDPILSAHQEDLFNDPYLY
        Y+L+YVDDI++ GSS+  L+ LI  L+STF  KDLG ++YFLGI+I             Y E        L  K ++TP +   + S+     + DP  +
Subjt:  YILIYVDDIIVIGSSSIFLDGLIKSLNSTFVFKDLGKLNYFLGIEI------------CYIE-----PRWLKLKLIATPMISDPILSAHQEDLFNDPYLY

Query:  RSIVGALQYATLTHLEISFSVNKACQFMHSPTILHWQMVKRIIRYLKGVLSHGLGLQKSSHLYLYGFADADWALDLDDRKSTYGFGVYFGGNLISWGSKK
        RSIVGALQY TLT  +IS++VN  CQ MH PT+  + ++KR++RY+KG + HGL + K+S L +  F D+DWA     R+ST GF  + G N+ISW +K+
Subjt:  RSIVGALQYATLTHLEISFSVNKACQFMHSPTILHWQMVKRIIRYLKGVLSHGLGLQKSSHLYLYGFADADWALDLDDRKSTYGFGVYFGGNLISWGSKK

Query:  QSIISRSSTEAECCCLALVAIEMVW
        Q  +SRSSTE E   LAL A E+ W
Subjt:  QSIISRSSTEAECCCLALVAIEMVW

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE19.2e-4543.31Show/hide
Query:  LLVKTTSVAYCYILIYVDDIIVIGSSSIFLDGLIKSLNSTFVFKDLGKLNYFLGIEI------CYIEPRWLKLKLIA-----------TPMISDPILSAH
        L V     +  Y+L+YVDDI++ G+    L   + +L+  F  KD  +L+YFLGIE        ++  R   L L+A           TPM   P LS +
Subjt:  LLVKTTSVAYCYILIYVDDIIVIGSSSIFLDGLIKSLNSTFVFKDLGKLNYFLGIEI------CYIEPRWLKLKLIA-----------TPMISDPILSAH

Query:  QEDLFNDPYLYRSIVGALQYATLTHLEISFSVNKACQFMHSPTILHWQMVKRIIRYLKGVLSHGLGLQKSSHLYLYGFADADWALDLDDRKSTYGFGVYF
              DP  YR IVG+LQY   T  +IS++VN+  QFMH PT  H Q +KRI+RYL G  +HG+ L+K + L L+ ++DADWA D DD  ST G+ VY 
Subjt:  QEDLFNDPYLYRSIVGALQYATLTHLEISFSVNKACQFMHSPTILHWQMVKRIIRYLKGVLSHGLGLQKSSHLYLYGFADADWALDLDDRKSTYGFGVYF

Query:  GGNLISWGSKKQSIISRSSTEAECCCLALVAIEMVWIHSLLTNFNIILHHPPVL
        G + ISW SKKQ  + RSSTEAE   +A  + EM WI SLLT   I L  PPV+
Subjt:  GGNLISWGSKKQSIISRSSTEAECCCLALVAIEMVWIHSLLTNFNIILHHPPVL

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE21.3e-4642.39Show/hide
Query:  YILIYVDDIIVIGSSSIFLDGLIKSLNSTFVFKDLGKLNYFLGIEICYI-----------------EPRWLKLKLIATPMISDPILSAHQEDLFNDPYLY
        Y+L+YVDDI++ G+ ++ L   + +L+  F  K+   L+YFLGIE   +                     L  K +ATPM + P L+ H      DP  Y
Subjt:  YILIYVDDIIVIGSSSIFLDGLIKSLNSTFVFKDLGKLNYFLGIEICYI-----------------EPRWLKLKLIATPMISDPILSAHQEDLFNDPYLY

Query:  RSIVGALQYATLTHLEISFSVNKACQFMHSPTILHWQMVKRIIRYLKGVLSHGLGLQKSSHLYLYGFADADWALDLDDRKSTYGFGVYFGGNLISWGSKK
        R IVG+LQY   T  ++S++VN+  Q+MH PT  HW  +KR++RYL G   HG+ L+K + L L+ ++DADWA D DD  ST G+ VY G + ISW SKK
Subjt:  RSIVGALQYATLTHLEISFSVNKACQFMHSPTILHWQMVKRIIRYLKGVLSHGLGLQKSSHLYLYGFADADWALDLDDRKSTYGFGVYFGGNLISWGSKK

Query:  QSIISRSSTEAECCCLALVAIEMVWIHSLLTNFNIILHHPPVL
        Q  + RSSTEAE   +A  + E+ WI SLLT   I L HPPV+
Subjt:  QSIISRSSTEAECCCLALVAIEMVWIHSLLTNFNIILHHPPVL

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 86.5e-3835.55Show/hide
Query:  HLLLVKTTSVAYCYILIYVDDIIVIGSSSIFLDGLIKSLNSTFVFKDLGKLNYFLGIEIC-----------------YIEPRWLKLKLIATPMISDPILS
        H   +K T+  +  +L+YVDDII+  ++   +D L   L S F  +DLG L YFLG+EI                    E   L  K  + PM      S
Subjt:  HLLLVKTTSVAYCYILIYVDDIIVIGSSSIFLDGLIKSLNSTFVFKDLGKLNYFLGIEIC-----------------YIEPRWLKLKLIATPMISDPILS

Query:  AHQEDLFNDPYLYRSIVGALQYATLTHLEISFSVNKACQFMHSPTILHWQMVKRIIRYLKGVLSHGLGLQKSSHLYLYGFADADWALDLDDRKSTYGFGV
        AH    F D   YR ++G L Y  +T L+ISF+VNK  QF  +P + H Q V +I+ Y+KG +  GL     + + L  F+DA +    D R+ST G+ +
Subjt:  AHQEDLFNDPYLYRSIVGALQYATLTHLEISFSVNKACQFMHSPTILHWQMVKRIIRYLKGVLSHGLGLQKSSHLYLYGFADADWALDLDDRKSTYGFGV

Query:  YFGGNLISWGSKKQSIISRSSTEAECCCLALVAIEMVWIHSLLTNFNIILHHPPVL
        + G +LISW SKKQ ++S+SS EAE   L+    EM+W+        + L  P +L
Subjt:  YFGGNLISWGSKKQSIISRSSTEAECCCLALVAIEMVWIHSLLTNFNIILHHPPVL

ATMG00240.1 Gag-Pol-related retrotransposon family protein1.7e-0937.66Show/hide
Query:  YATLTHLEISFSVNKACQFMHSPTILHWQMVKRIIRYLKGVLSHGLGLQKSSHLYLYGFADADWALDLDDRKSTYGF
        Y T+T  +++F+VN+  QF  +      Q V +++ Y+KG +  GL    +S L L  FAD+DWA   D R+S  GF
Subjt:  YATLTHLEISFSVNKACQFMHSPTILHWQMVKRIIRYLKGVLSHGLGLQKSSHLYLYGFADADWALDLDDRKSTYGF

ATMG00810.1 DNA/RNA polymerases superfamily protein1.0e-4344.44Show/hide
Query:  YILIYVDDIIVIGSSSIFLDGLIKSLNSTFVFKDLGKLNYFLGIEI------------CYIE-----PRWLKLKLIATPMISDPILSAHQEDLFNDPYLY
        Y+L+YVDDI++ GSS+  L+ LI  L+STF  KDLG ++YFLGI+I             Y E        L  K ++TP +   + S+     + DP  +
Subjt:  YILIYVDDIIVIGSSSIFLDGLIKSLNSTFVFKDLGKLNYFLGIEI------------CYIE-----PRWLKLKLIATPMISDPILSAHQEDLFNDPYLY

Query:  RSIVGALQYATLTHLEISFSVNKACQFMHSPTILHWQMVKRIIRYLKGVLSHGLGLQKSSHLYLYGFADADWALDLDDRKSTYGFGVYFGGNLISWGSKK
        RSIVGALQY TLT  +IS++VN  CQ MH PT+  + ++KR++RY+KG + HGL + K+S L +  F D+DWA     R+ST GF  + G N+ISW +K+
Subjt:  RSIVGALQYATLTHLEISFSVNKACQFMHSPTILHWQMVKRIIRYLKGVLSHGLGLQKSSHLYLYGFADADWALDLDDRKSTYGFGVYFGGNLISWGSKK

Query:  QSIISRSSTEAECCCLALVAIEMVW
        Q  +SRSSTE E   LAL A E+ W
Subjt:  QSIISRSSTEAECCCLALVAIEMVW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCATCTTTTACTTGTGAAAACTACTTCTGTTGCCTATTGTTATATCTTGATATATGTTGATGACATCATTGTGATAGGTAGTTCATCGATTTTTTTGGATGGG
TTAATTAAATCTTTGAACTCTACCTTTGTTTTCAAAGATCTTGGAAAGCTTAACTACTTTCTAGGTATCGAGATTTGCTACATCGAACCAAGATGGTTGAAGCTA
AAGCTTATTGCTACTCCTATGATTAGTGACCCAATATTATCTGCTCATCAGGAAGATCTTTTTAACGATCCCTACTTGTATAGAAGCATTGTGGGTGCTTTACAA
TATGCCACTCTTACTCATCTTGAAATCTCTTTTAGTGTTAACAAAGCTTGTCAGTTCATGCACTCTCCAACTATTTTACATTGGCAAATGGTGAAACGTATTATC
CGTTACCTAAAAGGAGTCTTATCTCATGGCTTAGGGCTCCAAAAGTCGAGTCACCTTTATCTATATGGCTTTGCAGATGCTGACTGGGCTTTAGACCTCGATGAC
AGAAAATCCACTTATGGCTTTGGTGTTTATTTTGGTGGTAACTTAATCTCGTGGGGCTCTAAGAAACAATCTATAATCTCTCGTTCAAGCACAGAAGCGGAGTGT
TGTTGTCTTGCTCTTGTGGCTATTGAAATGGTATGGATTCATTCTCTTTTAACTAATTTTAATATTATCTTGCATCATCCCCCTGTTTTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGCATCTTTTACTTGTGAAAACTACTTCTGTTGCCTATTGTTATATCTTGATATATGTTGATGACATCATTGTGATAGGTAGTTCATCGATTTTTTTGGATGGG
TTAATTAAATCTTTGAACTCTACCTTTGTTTTCAAAGATCTTGGAAAGCTTAACTACTTTCTAGGTATCGAGATTTGCTACATCGAACCAAGATGGTTGAAGCTA
AAGCTTATTGCTACTCCTATGATTAGTGACCCAATATTATCTGCTCATCAGGAAGATCTTTTTAACGATCCCTACTTGTATAGAAGCATTGTGGGTGCTTTACAA
TATGCCACTCTTACTCATCTTGAAATCTCTTTTAGTGTTAACAAAGCTTGTCAGTTCATGCACTCTCCAACTATTTTACATTGGCAAATGGTGAAACGTATTATC
CGTTACCTAAAAGGAGTCTTATCTCATGGCTTAGGGCTCCAAAAGTCGAGTCACCTTTATCTATATGGCTTTGCAGATGCTGACTGGGCTTTAGACCTCGATGAC
AGAAAATCCACTTATGGCTTTGGTGTTTATTTTGGTGGTAACTTAATCTCGTGGGGCTCTAAGAAACAATCTATAATCTCTCGTTCAAGCACAGAAGCGGAGTGT
TGTTGTCTTGCTCTTGTGGCTATTGAAATGGTATGGATTCATTCTCTTTTAACTAATTTTAATATTATCTTGCATCATCCCCCTGTTTTGTGA
Protein sequenceShow/hide protein sequence
MHLLLVKTTSVAYCYILIYVDDIIVIGSSSIFLDGLIKSLNSTFVFKDLGKLNYFLGIEICYIEPRWLKLKLIATPMISDPILSAHQEDLFNDPYLYRSIVGALQ
YATLTHLEISFSVNKACQFMHSPTILHWQMVKRIIRYLKGVLSHGLGLQKSSHLYLYGFADADWALDLDDRKSTYGFGVYFGGNLISWGSKKQSIISRSSTEAEC
CCLALVAIEMVWIHSLLTNFNIILHHPPVL