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Cmc10g0280211 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc10g0280211
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationCMiso1.1chr10:17717802..17721916
RNA-Seq ExpressionCmc10g0280211
SyntenyCmc10g0280211
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052371.1 putative mitochondrial protein [Cucumis melo var. makuwa]1.9e-0551.67Show/hide
Query:  YEKGTLGSGL-LTKTYLLEHNWVHDSDWSLDHDDRKSASGTCVLFGNDSVVWGSRKLSVI
        Y KG L  GL L+K+         D+DW+ D DDRKS SG CV FGN+ V WGS+K S+I
Subjt:  YEKGTLGSGL-LTKTYLLEHNWVHDSDWSLDHDDRKSASGTCVLFGNDSVVWGSRKLSVI
KAA0059238.1 putative mitochondrial protein [Cucumis melo var. makuwa]1.9e-0550Show/hide
Query:  YEKGTLGSGL-LTKTYLLEHNWVHDSDWSLDHDDRKSASGTCVLFGNDSVVWGSRKLSVI
        Y KG L   L L+K+  +  +   D+DW+ D DDRKS SG CV FGN+ V WGS+K S+I
Subjt:  YEKGTLGSGL-LTKTYLLEHNWVHDSDWSLDHDDRKSASGTCVLFGNDSVVWGSRKLSVI
KAA0063213.1 putative mitochondrial protein [Cucumis melo var. makuwa]2.5e-0550Show/hide
Query:  YEKGTLGSGL-LTKTYLLEHNWVHDSDWSLDHDDRKSASGTCVLFGNDSVVWGSRKLSVI
        Y KG L   L L+K+  +  +   D+DW+ D DDRKS SG CV FGN+ V WGS+K S+I
Subjt:  YEKGTLGSGL-LTKTYLLEHNWVHDSDWSLDHDDRKSASGTCVLFGNDSVVWGSRKLSVI
XP_022135935.1 uncharacterized protein LOC111007767 [Momordica charantia]1.1e-0549.18Show/hide
Query:  YEKGTLGSGLLTK--TYLLEHNWVHDSDWSLDHDDRKSASGTCVLFGNDSVVWGSRKLSVI
        Y KGT+  GLL    ++   H +V D+ W+ D DDRKS SG CV FG + V WGS+K S+I
Subjt:  YEKGTLGSGLLTK--TYLLEHNWVHDSDWSLDHDDRKSASGTCVLFGNDSVVWGSRKLSVI
XP_022157873.1 uncharacterized protein LOC111024485 [Momordica charantia]3.8e-0650Show/hide
Query:  YEKGTLGSGL-LTKTYLLEHNWVHDSDWSLDHDDRKSASGTCVLFGNDSVVWGSRKLSVI
        Y KGT+  GL L K      +   D DW+ D DDRKS SG CV FG + V WGS+K S+I
Subjt:  YEKGTLGSGL-LTKTYLLEHNWVHDSDWSLDHDDRKSASGTCVLFGNDSVVWGSRKLSVI
TrEMBL top hitse value%identityAlignment
A0A5A7UFS3 Putative mitochondrial protein9.2e-0651.67Show/hide
Query:  YEKGTLGSGL-LTKTYLLEHNWVHDSDWSLDHDDRKSASGTCVLFGNDSVVWGSRKLSVI
        Y KG L  GL L+K+         D+DW+ D DDRKS SG CV FGN+ V WGS+K S+I
Subjt:  YEKGTLGSGL-LTKTYLLEHNWVHDSDWSLDHDDRKSASGTCVLFGNDSVVWGSRKLSVI
A0A5A7UVQ3 Putative mitochondrial protein9.2e-0650Show/hide
Query:  YEKGTLGSGL-LTKTYLLEHNWVHDSDWSLDHDDRKSASGTCVLFGNDSVVWGSRKLSVI
        Y KG L   L L+K+  +  +   D+DW+ D DDRKS SG CV FGN+ V WGS+K S+I
Subjt:  YEKGTLGSGL-LTKTYLLEHNWVHDSDWSLDHDDRKSASGTCVLFGNDSVVWGSRKLSVI
A0A5D3DK36 Putative mitochondrial protein1.2e-0551.67Show/hide
Query:  YEKGTLGSGL-LTKTYLLEHNWVHDSDWSLDHDDRKSASGTCVLFGNDSVVWGSRKLSVI
        Y KG+L  GL L  +  L      D+DW+ D DDRKS SG CV FGN+ V WGS+K S+I
Subjt:  YEKGTLGSGL-LTKTYLLEHNWVHDSDWSLDHDDRKSASGTCVLFGNDSVVWGSRKLSVI
A0A6J1C2F7 uncharacterized protein LOC1110077675.4e-0649.18Show/hide
Query:  YEKGTLGSGLLTK--TYLLEHNWVHDSDWSLDHDDRKSASGTCVLFGNDSVVWGSRKLSVI
        Y KGT+  GLL    ++   H +V D+ W+ D DDRKS SG CV FG + V WGS+K S+I
Subjt:  YEKGTLGSGLLTK--TYLLEHNWVHDSDWSLDHDDRKSASGTCVLFGNDSVVWGSRKLSVI
A0A6J1DUJ4 uncharacterized protein LOC1110244851.9e-0650Show/hide
Query:  YEKGTLGSGL-LTKTYLLEHNWVHDSDWSLDHDDRKSASGTCVLFGNDSVVWGSRKLSVI
        Y KGT+  GL L K      +   D DW+ D DDRKS SG CV FG + V WGS+K S+I
Subjt:  YEKGTLGSGL-LTKTYLLEHNWVHDSDWSLDHDDRKSASGTCVLFGNDSVVWGSRKLSVI
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGAATTTATTTGTGGAGGCTATGAAAAGGGAACGCTTGGCTCTGGCCTACTTACAAAAACCTACTTGCTTGAACATAATTGGGTTCATGATTCTGATTGG
TCCTTAGATCACGATGACAGAAAATCAGCTTCAGGTACTTGTGTTTTGTTTGGTAATGATTCAGTTGTTTGGGGATCTAGAAAACTATCTGTTATATGA
mRNA sequenceShow/hide mRNA sequence
CCTCTTACACAACACATAACTCTAAAAAAAAAAAAATAATAAAGGAAAGAAGAAAACTAAGAGTAAGAGCTCCAAAAAATGTCACAGATGGGGTTTCTTTATTGG
AAAATAAAGAAATAACGAATAAATAAAAGGAGGATGAATTCTATGCGATGCTTGTCAAGTAAAAAGCCCTCTGCTGTAAATCACAACCTTTTGCTCTCGTTGTCT
GTTCGACCTTGAATTTTTCTCAAAAACATATAAATATTATTTATTCAGAACTTTTTTTTTTTTTTATCAATAAATAAATAAAATAAAACCCTCAATTTTGGATGG
ATTCATTGGTAGGTTTAGGTAGCAGCCGAAGGACTATACATTTTGGTAGTTTTGTGTTCTGAACAAATTGAAATATGAGGTCGAACAAACAACGGACACAAGGGT
TTAGCAGAAGACTATTTATTTGACAAAGCATTTGCATGGAATTCAATGCCTCTCATTTAGTTGAGAGAGATTTTCGTCCAGGTCATGGAAGAATTTATTTGTGGA
GGCTATGAAAAGGGAACGCTTGGCTCTGGCCTACTTACAAAAACCTACTTGCTTGAACATAATTGGGTTCATGATTCTGATTGGTCCTTAGATCACGATGACAGA
AAATCAGCTTCAGGTACTTGTGTTTTGTTTGGTAATGATTCAGTTGTTTGGGGATCTAGAAAACTATCTGTTATATGACACGATCAAACACAGAGGCAGAATATA
GGTGCAATATTTGTTTACTTAGTTGAGGATCTTTGTGCAACAAACTCCAATAATCTGATGTAATAATTTAAATGTTGTCCACCTCAATGCGAATCCCATACTTTA
TCT
Protein sequenceShow/hide protein sequence
MEEFICGGYEKGTLGSGLLTKTYLLEHNWVHDSDWSLDHDDRKSASGTCVLFGNDSVVWGSRKLSVI