; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc10g0280221 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc10g0280221
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionReverse transcriptase Ty1/copia-type domain-containing protein
Genome locationCMiso1.1chr10:17774854..17775991
RNA-Seq ExpressionCmc10g0280221
SyntenyCmc10g0280221
Gene Ontology termsNA
InterPro domainsIPR013103 - Reverse transcriptase, RNA-dependent DNA polymerase
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045362.1 putative mitochondrial protein [Cucumis melo var. makuwa]4.1e-15280.22Show/hide
Query:  MAQPTGFQDKTCLNHVCLLHKSFYGLKQAPRSWFERFTSYLFTLVGSSLTYLLLYVDDIIVTGPDYLYISVLKNQLALDFKISDLGPLKYFLGLKIQSSI
        M Q T FQDKTC NHVCLLHKS Y    A  S F R        VGS L+YLLLYVDDIIVTG DYLYI VLKNQLAL+FKIS+LGPLKYFLGL+IQSSI
Subjt:  MAQPTGFQDKTCLNHVCLLHKSFYGLKQAPRSWFERFTSYLFTLVGSSLTYLLLYVDDIIVTGPDYLYISVLKNQLALDFKISDLGPLKYFLGLKIQSSI

Query:  DGIFVNQAKYLNDLLHTLRMTSVKSCITLMSTSLDLYTITPPFNDPSLYRRLVGSLQYLTFTRPDIAFSVNRVSQFMHKPTVIHFSAIKRILRYLRG---
        DGIFVNQAKYLNDLLHT  MTS KSCIT MSTSLDLYTI PPFNDP LYRRLVGSLQYLTFTRPDIA SVNRVSQFMHKPTVIHFSA+KRILRYL G   
Subjt:  DGIFVNQAKYLNDLLHTLRMTSVKSCITLMSTSLDLYTITPPFNDPSLYRRLVGSLQYLTFTRPDIAFSVNRVSQFMHKPTVIHFSAIKRILRYLRG---

Query:  ----------------------DTSDRRSTSGFIAFLGSNPISWSSKKQSTVSCSSTEAEYCSLATTTANLYWIRQLLCDLHVSLKTSPTLWCDNVSAIS
                              DTSDRRSTSGFIAFLGSNPISWSSKKQS VS SSTEAEYCSLATTTA+LYWIRQLLCDLHV LKTSPTLWCDNVSAIS
Subjt:  ----------------------DTSDRRSTSGFIAFLGSNPISWSSKKQSTVSCSSTEAEYCSLATTTANLYWIRQLLCDLHVSLKTSPTLWCDNVSAIS

Query:  LAHNPVFHARTKHIEIYYHFVREKVLCKDIFIHYISSNNQLADILTKPLLSPIFLHFRDKLLTQPESSV
        LAHNPVFHARTKHIEI YHFV EKVLCKDI I YI SNNQLADILTKPLLSP FLH RDKLLTQPESSV
Subjt:  LAHNPVFHARTKHIEIYYHFVREKVLCKDIFIHYISSNNQLADILTKPLLSPIFLHFRDKLLTQPESSV

KAA0057165.1 putative mitochondrial protein [Cucumis melo var. makuwa]4.5e-13579.45Show/hide
Query:  MAQPTGFQDKTCLNHVCLLHKSFYGLKQAPRSWFERFTSYLFTL---------------VGSSLTYLLLYVDDIIVTGPDYLYISVLKNQLALDFKISDL
        MAQPTGFQDKTC NHVCLL+KS YGLKQAPR+WFERF SYLFTL               VGSSLTYLLLYV +IIV GPDYLYI VLKNQLAL+FKISDL
Subjt:  MAQPTGFQDKTCLNHVCLLHKSFYGLKQAPRSWFERFTSYLFTL---------------VGSSLTYLLLYVDDIIVTGPDYLYISVLKNQLALDFKISDL

Query:  GPLKYFLGLKIQSSIDGIFVNQAKYLNDLLHTLRMTSVKSCITLMSTSLDLYTITPPFNDPSLYRRLVGSLQYLTFTRPDIAFSVNRVSQFMHKPTVIHF
        GPLKYFLGL+IQSSIDGIFVNQAKYLNDLLHT RMTS K CIT MSTSLD YTI PPFNDPSLYRRLVGSLQYLTFTRPDIAFS+NRVSQFMHKPTVIHF
Subjt:  GPLKYFLGLKIQSSIDGIFVNQAKYLNDLLHTLRMTSVKSCITLMSTSLDLYTITPPFNDPSLYRRLVGSLQYLTFTRPDIAFSVNRVSQFMHKPTVIHF

Query:  SAIKRILRYLR-------------------------GDTSDRRSTSGFIAFLGSNPISWSSKKQSTVSCSSTEAEYCSLATTTANLYWIRQLLCDLHVSL
        SA+KRILRYLR                         GDTSD+RSTS FIAFLGSNPISWSSKKQSTVS SSTEAEY  LATTTA+LYWIRQLLCDLHV L
Subjt:  SAIKRILRYLR-------------------------GDTSDRRSTSGFIAFLGSNPISWSSKKQSTVSCSSTEAEYCSLATTTANLYWIRQLLCDLHVSL

Query:  KTSPTLWCDNVSAISLAHNPVFHART
        KTSPTLWCDNVSAISLAHN VFHART
Subjt:  KTSPTLWCDNVSAISLAHNPVFHART

KAA0061282.1 putative mitochondrial protein [Cucumis melo var. makuwa]2.6e-15179.94Show/hide
Query:  MAQPTGFQDKTCLNHVCLLHKSFYGLKQAPRSWFERFTSYLFTL---------------VGSSLTYLLLYVDDIIVTGPDYLYISVLKNQLALDFKISDL
        M QPTGFQ+KTC NHVCLLHKS YGLKQAPR+WFERFTSYLFTL               VGSSLTYLLLYVDDIIVTGPDYLYIS LKNQLAL+FKISDL
Subjt:  MAQPTGFQDKTCLNHVCLLHKSFYGLKQAPRSWFERFTSYLFTL---------------VGSSLTYLLLYVDDIIVTGPDYLYISVLKNQLALDFKISDL

Query:  GPLKYFLGLKIQSSIDGIFVNQAKYLNDLLHTLRMTSVKSCITLMSTSLDLYTITPPFNDPSLYRRLVGSLQYLTFTRPDIAFSVNRVSQFMHKPTVIHF
        GPLKYFLGL+IQSSIDGI VNQA+YLNDLLHT  MTS KSCIT +STSLDLYTI PPFNDPSLYRRL                       FMHKPTVIHF
Subjt:  GPLKYFLGLKIQSSIDGIFVNQAKYLNDLLHTLRMTSVKSCITLMSTSLDLYTITPPFNDPSLYRRLVGSLQYLTFTRPDIAFSVNRVSQFMHKPTVIHF

Query:  SAIKRILRYLRGDTSDRRSTSGFIAFLGSNPISWSSKKQSTVSCSSTEAEYCSLATTTANLYWIRQLLCDLHVSLKTSPTLWCDNVSAISLAHNPVFHAR
        SA+KRILRYL GDTSDRRSTSGFIAFL SNPISWSSKKQST+S SSTEAEY SLATTTA+LYWIRQLL DLHV LKTSP LWCDN+SAISLAHNPVFHAR
Subjt:  SAIKRILRYLRGDTSDRRSTSGFIAFLGSNPISWSSKKQSTVSCSSTEAEYCSLATTTANLYWIRQLLCDLHVSLKTSPTLWCDNVSAISLAHNPVFHAR

Query:  TKHIEIYYHFVREKVLCKDIFIHYISSNNQLADILTKPLLSPIFLHFRDKLLTQPESSV
        TKHIEI YHFVREKVL KDI I YISSNNQLADILTKPLLSP FLH RDKLLTQPESS+
Subjt:  TKHIEIYYHFVREKVLCKDIFIHYISSNNQLADILTKPLLSPIFLHFRDKLLTQPESSV

KAA0065957.1 putative mitochondrial protein [Cucumis melo var. makuwa]6.9e-160100Show/hide
Query:  DDIIVTGPDYLYISVLKNQLALDFKISDLGPLKYFLGLKIQSSIDGIFVNQAKYLNDLLHTLRMTSVKSCITLMSTSLDLYTITPPFNDPSLYRRLVGSL
        DDIIVTGPDYLYISVLKNQLALDFKISDLGPLKYFLGLKIQSSIDGIFVNQAKYLNDLLHTLRMTSVKSCITLMSTSLDLYTITPPFNDPSLYRRLVGSL
Subjt:  DDIIVTGPDYLYISVLKNQLALDFKISDLGPLKYFLGLKIQSSIDGIFVNQAKYLNDLLHTLRMTSVKSCITLMSTSLDLYTITPPFNDPSLYRRLVGSL

Query:  QYLTFTRPDIAFSVNRVSQFMHKPTVIHFSAIKRILRYLRGDTSDRRSTSGFIAFLGSNPISWSSKKQSTVSCSSTEAEYCSLATTTANLYWIRQLLCDL
        QYLTFTRPDIAFSVNRVSQFMHKPTVIHFSAIKRILRYLRGDTSDRRSTSGFIAFLGSNPISWSSKKQSTVSCSSTEAEYCSLATTTANLYWIRQLLCDL
Subjt:  QYLTFTRPDIAFSVNRVSQFMHKPTVIHFSAIKRILRYLRGDTSDRRSTSGFIAFLGSNPISWSSKKQSTVSCSSTEAEYCSLATTTANLYWIRQLLCDL

Query:  HVSLKTSPTLWCDNVSAISLAHNPVFHARTKHIEIYYHFVREKVLCKDIFIHYISSNNQLADILTKPLLSPIFLHFRDKLLTQPESSV
        HVSLKTSPTLWCDNVSAISLAHNPVFHARTKHIEIYYHFVREKVLCKDIFIHYISSNNQLADILTKPLLSPIFLHFRDKLLTQPESSV
Subjt:  HVSLKTSPTLWCDNVSAISLAHNPVFHARTKHIEIYYHFVREKVLCKDIFIHYISSNNQLADILTKPLLSPIFLHFRDKLLTQPESSV

TYJ97594.1 putative mitochondrial protein [Cucumis melo var. makuwa]8.5e-13478.85Show/hide
Query:  MAQPTGFQDKTCLNHVCLLHKSFYGLKQAPRSWFERFTSYLFTL---------------VGSSLTYLLLYVDDIIVTGPDYLYISVLKNQLALDFKISDL
        MAQPT FQDKTC NHVCLLHKS YGLKQAPR+WFERFTSYLFTL               VGS LTYLLLYV DIIVTGP+YLYISVLKNQLAL+FKISD 
Subjt:  MAQPTGFQDKTCLNHVCLLHKSFYGLKQAPRSWFERFTSYLFTL---------------VGSSLTYLLLYVDDIIVTGPDYLYISVLKNQLALDFKISDL

Query:  GPLKYFLGLKIQSSIDGIFVNQAKYLNDLLHTLRMTSVKSCITLMSTSLDLYTITPPFNDPSLYRRLVGSLQYLTFTRPDIAFSVNRVSQFMHKPTVIHF
        GPLKYFLGL+IQSSIDGIFVNQAKYLNDLLHT RMTS KSCITLMSTSLDLYTITPPFNDPSLYRRLVGSLQY TFT P+IAFSVNRVSQFMHK TVIHF
Subjt:  GPLKYFLGLKIQSSIDGIFVNQAKYLNDLLHTLRMTSVKSCITLMSTSLDLYTITPPFNDPSLYRRLVGSLQYLTFTRPDIAFSVNRVSQFMHKPTVIHF

Query:  SAIKRILRYLRGDTSDRRSTSGFIAFLGSNPISWSSKKQSTVSCSSTEAEYCSLATTTANLYWIRQLLCDLHVSLKTSPTLWCDNVSAISLAHNPVFHAR
        SA+KRILRYL G  +           LG        K+QSTVS SSTEA+Y SLATTTA+LYWIRQLLCDLHV LKTSPTLWC NVSAISLAHNPVF AR
Subjt:  SAIKRILRYLRGDTSDRRSTSGFIAFLGSNPISWSSKKQSTVSCSSTEAEYCSLATTTANLYWIRQLLCDLHVSLKTSPTLWCDNVSAISLAHNPVFHAR

Query:  TKHIEIYYHFVREKVLCKDIFIHYISSNNQL
        TKHIEI YHFVREKVL KDI I YISS   L
Subjt:  TKHIEIYYHFVREKVLCKDIFIHYISSNNQL

TrEMBL top hitse value%identityAlignment
A0A5A7TPR4 Putative mitochondrial protein2.0e-15280.22Show/hide
Query:  MAQPTGFQDKTCLNHVCLLHKSFYGLKQAPRSWFERFTSYLFTLVGSSLTYLLLYVDDIIVTGPDYLYISVLKNQLALDFKISDLGPLKYFLGLKIQSSI
        M Q T FQDKTC NHVCLLHKS Y    A  S F R        VGS L+YLLLYVDDIIVTG DYLYI VLKNQLAL+FKIS+LGPLKYFLGL+IQSSI
Subjt:  MAQPTGFQDKTCLNHVCLLHKSFYGLKQAPRSWFERFTSYLFTLVGSSLTYLLLYVDDIIVTGPDYLYISVLKNQLALDFKISDLGPLKYFLGLKIQSSI

Query:  DGIFVNQAKYLNDLLHTLRMTSVKSCITLMSTSLDLYTITPPFNDPSLYRRLVGSLQYLTFTRPDIAFSVNRVSQFMHKPTVIHFSAIKRILRYLRG---
        DGIFVNQAKYLNDLLHT  MTS KSCIT MSTSLDLYTI PPFNDP LYRRLVGSLQYLTFTRPDIA SVNRVSQFMHKPTVIHFSA+KRILRYL G   
Subjt:  DGIFVNQAKYLNDLLHTLRMTSVKSCITLMSTSLDLYTITPPFNDPSLYRRLVGSLQYLTFTRPDIAFSVNRVSQFMHKPTVIHFSAIKRILRYLRG---

Query:  ----------------------DTSDRRSTSGFIAFLGSNPISWSSKKQSTVSCSSTEAEYCSLATTTANLYWIRQLLCDLHVSLKTSPTLWCDNVSAIS
                              DTSDRRSTSGFIAFLGSNPISWSSKKQS VS SSTEAEYCSLATTTA+LYWIRQLLCDLHV LKTSPTLWCDNVSAIS
Subjt:  ----------------------DTSDRRSTSGFIAFLGSNPISWSSKKQSTVSCSSTEAEYCSLATTTANLYWIRQLLCDLHVSLKTSPTLWCDNVSAIS

Query:  LAHNPVFHARTKHIEIYYHFVREKVLCKDIFIHYISSNNQLADILTKPLLSPIFLHFRDKLLTQPESSV
        LAHNPVFHARTKHIEI YHFV EKVLCKDI I YI SNNQLADILTKPLLSP FLH RDKLLTQPESSV
Subjt:  LAHNPVFHARTKHIEIYYHFVREKVLCKDIFIHYISSNNQLADILTKPLLSPIFLHFRDKLLTQPESSV

A0A5A7UZE5 Putative mitochondrial protein1.3e-15179.94Show/hide
Query:  MAQPTGFQDKTCLNHVCLLHKSFYGLKQAPRSWFERFTSYLFTL---------------VGSSLTYLLLYVDDIIVTGPDYLYISVLKNQLALDFKISDL
        M QPTGFQ+KTC NHVCLLHKS YGLKQAPR+WFERFTSYLFTL               VGSSLTYLLLYVDDIIVTGPDYLYIS LKNQLAL+FKISDL
Subjt:  MAQPTGFQDKTCLNHVCLLHKSFYGLKQAPRSWFERFTSYLFTL---------------VGSSLTYLLLYVDDIIVTGPDYLYISVLKNQLALDFKISDL

Query:  GPLKYFLGLKIQSSIDGIFVNQAKYLNDLLHTLRMTSVKSCITLMSTSLDLYTITPPFNDPSLYRRLVGSLQYLTFTRPDIAFSVNRVSQFMHKPTVIHF
        GPLKYFLGL+IQSSIDGI VNQA+YLNDLLHT  MTS KSCIT +STSLDLYTI PPFNDPSLYRRL                       FMHKPTVIHF
Subjt:  GPLKYFLGLKIQSSIDGIFVNQAKYLNDLLHTLRMTSVKSCITLMSTSLDLYTITPPFNDPSLYRRLVGSLQYLTFTRPDIAFSVNRVSQFMHKPTVIHF

Query:  SAIKRILRYLRGDTSDRRSTSGFIAFLGSNPISWSSKKQSTVSCSSTEAEYCSLATTTANLYWIRQLLCDLHVSLKTSPTLWCDNVSAISLAHNPVFHAR
        SA+KRILRYL GDTSDRRSTSGFIAFL SNPISWSSKKQST+S SSTEAEY SLATTTA+LYWIRQLL DLHV LKTSP LWCDN+SAISLAHNPVFHAR
Subjt:  SAIKRILRYLRGDTSDRRSTSGFIAFLGSNPISWSSKKQSTVSCSSTEAEYCSLATTTANLYWIRQLLCDLHVSLKTSPTLWCDNVSAISLAHNPVFHAR

Query:  TKHIEIYYHFVREKVLCKDIFIHYISSNNQLADILTKPLLSPIFLHFRDKLLTQPESSV
        TKHIEI YHFVREKVL KDI I YISSNNQLADILTKPLLSP FLH RDKLLTQPESS+
Subjt:  TKHIEIYYHFVREKVLCKDIFIHYISSNNQLADILTKPLLSPIFLHFRDKLLTQPESSV

A0A5A7VFU7 Putative mitochondrial protein3.4e-160100Show/hide
Query:  DDIIVTGPDYLYISVLKNQLALDFKISDLGPLKYFLGLKIQSSIDGIFVNQAKYLNDLLHTLRMTSVKSCITLMSTSLDLYTITPPFNDPSLYRRLVGSL
        DDIIVTGPDYLYISVLKNQLALDFKISDLGPLKYFLGLKIQSSIDGIFVNQAKYLNDLLHTLRMTSVKSCITLMSTSLDLYTITPPFNDPSLYRRLVGSL
Subjt:  DDIIVTGPDYLYISVLKNQLALDFKISDLGPLKYFLGLKIQSSIDGIFVNQAKYLNDLLHTLRMTSVKSCITLMSTSLDLYTITPPFNDPSLYRRLVGSL

Query:  QYLTFTRPDIAFSVNRVSQFMHKPTVIHFSAIKRILRYLRGDTSDRRSTSGFIAFLGSNPISWSSKKQSTVSCSSTEAEYCSLATTTANLYWIRQLLCDL
        QYLTFTRPDIAFSVNRVSQFMHKPTVIHFSAIKRILRYLRGDTSDRRSTSGFIAFLGSNPISWSSKKQSTVSCSSTEAEYCSLATTTANLYWIRQLLCDL
Subjt:  QYLTFTRPDIAFSVNRVSQFMHKPTVIHFSAIKRILRYLRGDTSDRRSTSGFIAFLGSNPISWSSKKQSTVSCSSTEAEYCSLATTTANLYWIRQLLCDL

Query:  HVSLKTSPTLWCDNVSAISLAHNPVFHARTKHIEIYYHFVREKVLCKDIFIHYISSNNQLADILTKPLLSPIFLHFRDKLLTQPESSV
        HVSLKTSPTLWCDNVSAISLAHNPVFHARTKHIEIYYHFVREKVLCKDIFIHYISSNNQLADILTKPLLSPIFLHFRDKLLTQPESSV
Subjt:  HVSLKTSPTLWCDNVSAISLAHNPVFHARTKHIEIYYHFVREKVLCKDIFIHYISSNNQLADILTKPLLSPIFLHFRDKLLTQPESSV

A0A5D3BEU0 Putative mitochondrial protein4.1e-13478.85Show/hide
Query:  MAQPTGFQDKTCLNHVCLLHKSFYGLKQAPRSWFERFTSYLFTL---------------VGSSLTYLLLYVDDIIVTGPDYLYISVLKNQLALDFKISDL
        MAQPT FQDKTC NHVCLLHKS YGLKQAPR+WFERFTSYLFTL               VGS LTYLLLYV DIIVTGP+YLYISVLKNQLAL+FKISD 
Subjt:  MAQPTGFQDKTCLNHVCLLHKSFYGLKQAPRSWFERFTSYLFTL---------------VGSSLTYLLLYVDDIIVTGPDYLYISVLKNQLALDFKISDL

Query:  GPLKYFLGLKIQSSIDGIFVNQAKYLNDLLHTLRMTSVKSCITLMSTSLDLYTITPPFNDPSLYRRLVGSLQYLTFTRPDIAFSVNRVSQFMHKPTVIHF
        GPLKYFLGL+IQSSIDGIFVNQAKYLNDLLHT RMTS KSCITLMSTSLDLYTITPPFNDPSLYRRLVGSLQY TFT P+IAFSVNRVSQFMHK TVIHF
Subjt:  GPLKYFLGLKIQSSIDGIFVNQAKYLNDLLHTLRMTSVKSCITLMSTSLDLYTITPPFNDPSLYRRLVGSLQYLTFTRPDIAFSVNRVSQFMHKPTVIHF

Query:  SAIKRILRYLRGDTSDRRSTSGFIAFLGSNPISWSSKKQSTVSCSSTEAEYCSLATTTANLYWIRQLLCDLHVSLKTSPTLWCDNVSAISLAHNPVFHAR
        SA+KRILRYL G  +           LG        K+QSTVS SSTEA+Y SLATTTA+LYWIRQLLCDLHV LKTSPTLWC NVSAISLAHNPVF AR
Subjt:  SAIKRILRYLRGDTSDRRSTSGFIAFLGSNPISWSSKKQSTVSCSSTEAEYCSLATTTANLYWIRQLLCDLHVSLKTSPTLWCDNVSAISLAHNPVFHAR

Query:  TKHIEIYYHFVREKVLCKDIFIHYISSNNQL
        TKHIEI YHFVREKVL KDI I YISS   L
Subjt:  TKHIEIYYHFVREKVLCKDIFIHYISSNNQL

A0A5D3DUH6 Putative mitochondrial protein2.2e-13579.45Show/hide
Query:  MAQPTGFQDKTCLNHVCLLHKSFYGLKQAPRSWFERFTSYLFTL---------------VGSSLTYLLLYVDDIIVTGPDYLYISVLKNQLALDFKISDL
        MAQPTGFQDKTC NHVCLL+KS YGLKQAPR+WFERF SYLFTL               VGSSLTYLLLYV +IIV GPDYLYI VLKNQLAL+FKISDL
Subjt:  MAQPTGFQDKTCLNHVCLLHKSFYGLKQAPRSWFERFTSYLFTL---------------VGSSLTYLLLYVDDIIVTGPDYLYISVLKNQLALDFKISDL

Query:  GPLKYFLGLKIQSSIDGIFVNQAKYLNDLLHTLRMTSVKSCITLMSTSLDLYTITPPFNDPSLYRRLVGSLQYLTFTRPDIAFSVNRVSQFMHKPTVIHF
        GPLKYFLGL+IQSSIDGIFVNQAKYLNDLLHT RMTS K CIT MSTSLD YTI PPFNDPSLYRRLVGSLQYLTFTRPDIAFS+NRVSQFMHKPTVIHF
Subjt:  GPLKYFLGLKIQSSIDGIFVNQAKYLNDLLHTLRMTSVKSCITLMSTSLDLYTITPPFNDPSLYRRLVGSLQYLTFTRPDIAFSVNRVSQFMHKPTVIHF

Query:  SAIKRILRYLR-------------------------GDTSDRRSTSGFIAFLGSNPISWSSKKQSTVSCSSTEAEYCSLATTTANLYWIRQLLCDLHVSL
        SA+KRILRYLR                         GDTSD+RSTS FIAFLGSNPISWSSKKQSTVS SSTEAEY  LATTTA+LYWIRQLLCDLHV L
Subjt:  SAIKRILRYLR-------------------------GDTSDRRSTSGFIAFLGSNPISWSSKKQSTVSCSSTEAEYCSLATTTANLYWIRQLLCDLHVSL

Query:  KTSPTLWCDNVSAISLAHNPVFHART
        KTSPTLWCDNVSAISLAHN VFHART
Subjt:  KTSPTLWCDNVSAISLAHNPVFHART

SwissProt top hitse value%identityAlignment
P04146 Copia protein1.8e-4933.33Show/hide
Query:  NHVCLLHKSFYGLKQAPRSWFERFTSYL--FTLVGSSL---------------TYLLLYVDDIIVTGPDYLYISVLKNQLALDFKISDLGPLKYFLGLKI
        ++VC L+K+ YGLKQA R WFE F   L     V SS+                Y+LLYVDD+++   D   ++  K  L   F+++DL  +K+F+G++I
Subjt:  NHVCLLHKSFYGLKQAPRSWFERFTSYL--FTLVGSSL---------------TYLLLYVDDIIVTGPDYLYISVLKNQLALDFKISDLGPLKYFLGLKI

Query:  QSSIDGIFVNQAKYLNDLLHTLRMTSVKSCITLMSTSLDLYTITPPFNDPSLYRRLVGSLQYLTF-TRPDIAFSVNRVSQFMHKPTVIHFSAIKRILRYL
        +   D I+++Q+ Y+  +L    M +  +  T + + ++   +    +  +  R L+G L Y+   TRPD+  +VN +S++  K     +  +KR+LRYL
Subjt:  QSSIDGIFVNQAKYLNDLLHTLRMTSVKSCITLMSTSLDLYTITPPFNDPSLYRRLVGSLQYLTF-TRPDIAFSVNRVSQFMHKPTVIHFSAIKRILRYL

Query:  RGDTS----------------------------DRRSTSGFI-AFLGSNPISWSSKKQSTVSCSSTEAEYCSLATTTANLYWIRQLLCDLHVSLKTSPTL
        +G                               DR+ST+G++      N I W++K+Q++V+ SSTEAEY +L        W++ LL  +++ L+    +
Subjt:  RGDTS----------------------------DRRSTSGFI-AFLGSNPISWSSKKQSTVSCSSTEAEYCSLATTTANLYWIRQLLCDLHVSLKTSPTL

Query:  WCDNVSAISLAHNPVFHARTKHIEIYYHFVREKVLCKDIFIHYISSNNQLADILTKPLLSPIFLHFRDKL-LTQPESS
        + DN   IS+A+NP  H R KHI+I YHF RE+V    I + YI + NQLADI TKPL +  F+  RDKL L Q + S
Subjt:  WCDNVSAISLAHNPVFHARTKHIEIYYHFVREKVLCKDIFIHYISSNNQLADILTKPLLSPIFLHFRDKL-LTQPESS

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-941.0e-4935.39Show/hide
Query:  MAQPTGFQDKTCLNHVCLLHKSFYGLKQAPRSWFERFTS----------------YLFTLVGSSLTYLLLYVDDIIVTGPDYLYISVLKNQLALDFKISD
        M QP GF+     + VC L+KS YGLKQAPR W+ +F S                Y      ++   LLLYVDD+++ G D   I+ LK  L+  F + D
Subjt:  MAQPTGFQDKTCLNHVCLLHKSFYGLKQAPRSWFERFTS----------------YLFTLVGSSLTYLLLYVDDIIVTGPDYLYISVLKNQLALDFKISD

Query:  LGPLKYFLGLKI--QSSIDGIFVNQAKYLNDLLHTLRMTSVKSCITLMSTSLDL------YTITPPFNDPSL-YRRLVGSLQY-LTFTRPDIAFSVNRVS
        LGP +  LG+KI  + +   ++++Q KY+  +L    M + K   T ++  L L       T+    N   + Y   VGSL Y +  TRPDIA +V  VS
Subjt:  LGPLKYFLGLKI--QSSIDGIFVNQAKYLNDLLHTLRMTSVKSCITLMSTSLDL------YTITPPFNDPSL-YRRLVGSLQY-LTFTRPDIAFSVNRVS

Query:  QFMHKPTVIHFSAIKRILRYLRGDTSD-------------------------RRSTSGFIAFLGSNPISWSSKKQSTVSCSSTEAEYCSLATTTANLYWI
        +F+  P   H+ A+K ILRYLRG T D                         R+S++G++       ISW SK Q  V+ S+TEAEY +   T   + W+
Subjt:  QFMHKPTVIHFSAIKRILRYLRGDTSD-------------------------RRSTSGFIAFLGSNPISWSSKKQSTVSCSSTEAEYCSLATTTANLYWI

Query:  RQLLCDLHVSLKTSPTLWCDNVSAISLAHNPVFHARTKHIEIYYHFVREKVLCKDIFIHYISSNNQLADILTK
        ++ L +L +  K    ++CD+ SAI L+ N ++HARTKHI++ YH++RE V  + + +  IS+N   AD+LTK
Subjt:  RQLLCDLHVSLKTSPTLWCDNVSAISLAHNPVFHARTKHIEIYYHFVREKVLCKDIFIHYISSNNQLADILTK

P92519 Uncharacterized mitochondrial protein AtMg008107.2e-4344.2Show/hide
Query:  YLLLYVDDIIVTGPDYLYISVLKNQLALDFKISDLGPLKYFLGLKIQSSIDGIFVNQAKYLNDLLHTLRMTSVKSCITLMSTSLDLYTITPPFNDPSLYR
        YLLLYVDDI++TG     +++L  QL+  F + DLGP+ YFLG++I++   G+F++Q KY   +L+   M   K   T +   L+    T  + DPS +R
Subjt:  YLLLYVDDIIVTGPDYLYISVLKNQLALDFKISDLGPLKYFLGLKIQSSIDGIFVNQAKYLNDLLHTLRMTSVKSCITLMSTSLDLYTITPPFNDPSLYR

Query:  RLVGSLQYLTFTRPDIAFSVNRVSQFMHKPTVIHFSAIKRILRYLRGD--------------------------TSDRRSTSGFIAFLGSNPISWSSKKQ
         +VG+LQYLT TRPDI+++VN V Q MH+PT+  F  +KR+LRY++G                           TS RRST+GF  FLG N ISWS+K+Q
Subjt:  RLVGSLQYLTFTRPDIAFSVNRVSQFMHKPTVIHFSAIKRILRYLRGD--------------------------TSDRRSTSGFIAFLGSNPISWSSKKQ

Query:  STVSCSSTEAEYCSLATTTANLYW
         TVS SSTE EY +LA T A L W
Subjt:  STVSCSSTEAEYCSLATTTANLYW

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE12.2e-7643.54Show/hide
Query:  MAQPTGFQDKTCLNHVCLLHKSFYGLKQAPRSWFERFTSYLFTL---------------VGSSLTYLLLYVDDIIVTGPDYLYISVLKNQLALDFKISDL
        M+QP GF DK   N+VC L K+ YGLKQAPR+W+    +YL T+                G S+ Y+L+YVDDI++TG D   +    + L+  F + D 
Subjt:  MAQPTGFQDKTCLNHVCLLHKSFYGLKQAPRSWFERFTSYLFTL---------------VGSSLTYLLLYVDDIIVTGPDYLYISVLKNQLALDFKISDL

Query:  GPLKYFLGLKIQSSIDGIFVNQAKYLNDLLHTLRMTSVKSCITLMSTS--LDLYTITPPFNDPSLYRRLVGSLQYLTFTRPDIAFSVNRVSQFMHKPTVI
          L YFLG++ +    G+ ++Q +Y+ DLL    M + K   T M+ S  L LY+ T    DP+ YR +VGSLQYL FTRPDI+++VNR+SQFMH PT  
Subjt:  GPLKYFLGLKIQSSIDGIFVNQAKYLNDLLHTLRMTSVKSCITLMSTS--LDLYTITPPFNDPSLYRRLVGSLQYLTFTRPDIAFSVNRVSQFMHKPTVI

Query:  HFSAIKRILRYL--------------------------RGDTSDRRSTSGFIAFLGSNPISWSSKKQSTVSCSSTEAEYCSLATTTANLYWIRQLLCDLH
        H  A+KRILRYL                           GD  D  ST+G+I +LG +PISWSSKKQ  V  SSTEAEY S+A T++ + WI  LL +L 
Subjt:  HFSAIKRILRYL--------------------------RGDTSDRRSTSGFIAFLGSNPISWSSKKQSTVSCSSTEAEYCSLATTTANLYWIRQLLCDLH

Query:  VSLKTSPTLWCDNVSAISLAHNPVFHARTKHIEIYYHFVREKVLCKDIFIHYISSNNQLADILTKPLLSPIFLHFRDKL
        + L   P ++CDNV A  L  NPVFH+R KHI I YHF+R +V    + + ++S+++QLAD LTKPL    F +F  K+
Subjt:  VSLKTSPTLWCDNVSAISLAHNPVFHARTKHIEIYYHFVREKVLCKDIFIHYISSNNQLADILTKPLLSPIFLHFRDKL

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE27.1e-7542.48Show/hide
Query:  MAQPTGFQDKTCLNHVCLLHKSFYGLKQAPRSWFERFTSYLFTL---------------VGSSLTYLLLYVDDIIVTGPDYLYISVLKNQLALDFKISDL
        M+QP GF DK   ++VC L K+ YGLKQAPR+W+    +YL T+                G S+ Y+L+YVDDI++TG D + +    + L+  F + + 
Subjt:  MAQPTGFQDKTCLNHVCLLHKSFYGLKQAPRSWFERFTSYLFTL---------------VGSSLTYLLLYVDDIIVTGPDYLYISVLKNQLALDFKISDL

Query:  GPLKYFLGLKIQSSIDGIFVNQAKYLNDLLHTLRMTSVKSCITLMSTS--LDLYTITPPFNDPSLYRRLVGSLQYLTFTRPDIAFSVNRVSQFMHKPTVI
          L YFLG++ +    G+ ++Q +Y  DLL    M + K   T M+TS  L L++ T    DP+ YR +VGSLQYL FTRPD++++VNR+SQ+MH PT  
Subjt:  GPLKYFLGLKIQSSIDGIFVNQAKYLNDLLHTLRMTSVKSCITLMSTS--LDLYTITPPFNDPSLYRRLVGSLQYLTFTRPDIAFSVNRVSQFMHKPTVI

Query:  HFSAIKRILRYL--------------------------RGDTSDRRSTSGFIAFLGSNPISWSSKKQSTVSCSSTEAEYCSLATTTANLYWIRQLLCDLH
        H++A+KR+LRYL                           GDT D  ST+G+I +LG +PISWSSKKQ  V  SSTEAEY S+A T++ L WI  LL +L 
Subjt:  HFSAIKRILRYL--------------------------RGDTSDRRSTSGFIAFLGSNPISWSSKKQSTVSCSSTEAEYCSLATTTANLYWIRQLLCDLH

Query:  VSLKTSPTLWCDNVSAISLAHNPVFHARTKHIEIYYHFVREKVLCKDIFIHYISSNNQLADILTKPLLSPIFLHFRDKL
        + L   P ++CDNV A  L  NPVFH+R KHI + YHF+R +V    + + ++S+++QLAD LTKPL    F +F  K+
Subjt:  VSLKTSPTLWCDNVSAISLAHNPVFHARTKHIEIYYHFVREKVLCKDIFIHYISSNNQLADILTKPLLSPIFLHFRDKL

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 88.4e-5539.94Show/hide
Query:  NHVCLLHKSFYGLKQAPRSWFERFT---------------SYLFTLVGSSLTYLLLYVDDIIVTGPDYLYISVLKNQLALDFKISDLGPLKYFLGLKIQS
        N VC L KS YGLKQA R WF +F+               +Y   +  +    +L+YVDDII+   +   +  LK+QL   FK+ DLGPLKYFLGL+I  
Subjt:  NHVCLLHKSFYGLKQAPRSWFERFT---------------SYLFTLVGSSLTYLLLYVDDIIVTGPDYLYISVLKNQLALDFKISDLGPLKYFLGLKIQS

Query:  SIDGIFVNQAKYLNDLLHTLRMTSVKSCITLMSTSLDLYTIT-PPFNDPSLYRRLVGSLQYLTFTRPDIAFSVNRVSQFMHKPTVIHFSAIKRILRYLRG
        S  GI + Q KY  DLL    +   K     M  S+     +   F D   YRRL+G L YL  TR DI+F+VN++SQF   P + H  A+ +IL Y++G
Subjt:  SIDGIFVNQAKYLNDLLHTLRMTSVKSCITLMSTSLDLYTIT-PPFNDPSLYRRLVGSLQYLTFTRPDIAFSVNRVSQFMHKPTVIHFSAIKRILRYLRG

Query:  DTSD--------------------------RRSTSGFIAFLGSNPISWSSKKQSTVSCSSTEAEYCSLATTTANLYWIRQLLCDLHVSLKTSPTLWCDNV
                                      RRST+G+  FLG++ ISW SKKQ  VS SS EAEY +L+  T  + W+ Q   +L + L     L+CDN 
Subjt:  DTSD--------------------------RRSTSGFIAFLGSNPISWSSKKQSTVSCSSTEAEYCSLATTTANLYWIRQLLCDLHVSLKTSPTLWCDNV

Query:  SAISLAHNPVFHARTKHIEIYYHFVREK
        +AI +A N VFH RTKHIE   H VRE+
Subjt:  SAISLAHNPVFHARTKHIEIYYHFVREK

ATMG00240.1 Gag-Pol-related retrotransposon family protein2.3e-0445Show/hide
Query:  YLTFTRPDIAFSVNRVSQFMHKPTVIHFSAIKRILRYLRG
        YLT TRPD+ F+VNR+SQF          A+ ++L Y++G
Subjt:  YLTFTRPDIAFSVNRVSQFMHKPTVIHFSAIKRILRYLRG

ATMG00810.1 DNA/RNA polymerases superfamily protein5.1e-4444.2Show/hide
Query:  YLLLYVDDIIVTGPDYLYISVLKNQLALDFKISDLGPLKYFLGLKIQSSIDGIFVNQAKYLNDLLHTLRMTSVKSCITLMSTSLDLYTITPPFNDPSLYR
        YLLLYVDDI++TG     +++L  QL+  F + DLGP+ YFLG++I++   G+F++Q KY   +L+   M   K   T +   L+    T  + DPS +R
Subjt:  YLLLYVDDIIVTGPDYLYISVLKNQLALDFKISDLGPLKYFLGLKIQSSIDGIFVNQAKYLNDLLHTLRMTSVKSCITLMSTSLDLYTITPPFNDPSLYR

Query:  RLVGSLQYLTFTRPDIAFSVNRVSQFMHKPTVIHFSAIKRILRYLRGD--------------------------TSDRRSTSGFIAFLGSNPISWSSKKQ
         +VG+LQYLT TRPDI+++VN V Q MH+PT+  F  +KR+LRY++G                           TS RRST+GF  FLG N ISWS+K+Q
Subjt:  RLVGSLQYLTFTRPDIAFSVNRVSQFMHKPTVIHFSAIKRILRYLRGD--------------------------TSDRRSTSGFIAFLGSNPISWSSKKQ

Query:  STVSCSSTEAEYCSLATTTANLYW
         TVS SSTE EY +LA T A L W
Subjt:  STVSCSSTEAEYCSLATTTANLYW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCAACCTACTGGCTTCCAAGACAAAACATGTCTCAATCATGTGTGTCTCCTCCACAAGAGTTTTTATGGTCTCAAACAGGCCCCTCGCTCTTGGTTTGAA
CGCTTTACATCTTATTTATTCACTTTGGTCGGATCCTCTCTTACTTACTTACTTTTGTATGTAGATGACATCATTGTCACTGGACCTGACTATTTATACATTTCT
GTTCTTAAAAACCAATTGGCCCTGGACTTCAAAATATCCGACCTTGGTCCTTTAAAGTACTTTCTTGGTCTCAAAATCCAATCCTCCATTGATGGCATATTTGTT
AACCAAGCAAAATATCTCAATGATCTCCTCCACACATTGAGAATGACCTCTGTCAAATCTTGTATCACACTAATGTCTACTTCTCTTGATCTTTATACAATTACA
CCACCATTTAATGATCCATCACTTTATCGCAGACTAGTTGGTTCCTTGCAATATCTTACCTTCACTCGTCCTGATATTGCATTCTCTGTAAATCGTGTTAGTCAG
TTCATGCATAAACCAACTGTCATTCACTTTTCAGCCATCAAACGCATCCTCAGATATCTCCGTGGTGATACATCTGATCGACGTTCCACCTCCGGCTTCATCGCC
TTTCTCGGTTCTAATCCAATATCTTGGTCTTCTAAAAAGCAATCTACCGTCTCTTGTTCCTCCACAGAAGCAGAATATTGTTCCCTTGCCACTACTACTGCCAAT
CTTTACTGGATTCGACAGCTTCTATGTGATCTCCATGTTTCCCTTAAGACATCACCAACATTATGGTGTGATAATGTTTCCGCTATATCTCTGGCTCATAATCCA
GTTTTTCATGCTCGCACCAAACACATTGAAATTTATTATCACTTTGTTCGGGAAAAAGTTCTTTGCAAAGACATCTTCATCCATTACATCTCTTCCAACAACCAA
CTTGCTGATATTCTCACAAAGCCACTTCTATCTCCTATATTCCTTCACTTTCGAGACAAACTACTGACTCAACCTGAGTCATCCGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTCAACCTACTGGCTTCCAAGACAAAACATGTCTCAATCATGTGTGTCTCCTCCACAAGAGTTTTTATGGTCTCAAACAGGCCCCTCGCTCTTGGTTTGAA
CGCTTTACATCTTATTTATTCACTTTGGTCGGATCCTCTCTTACTTACTTACTTTTGTATGTAGATGACATCATTGTCACTGGACCTGACTATTTATACATTTCT
GTTCTTAAAAACCAATTGGCCCTGGACTTCAAAATATCCGACCTTGGTCCTTTAAAGTACTTTCTTGGTCTCAAAATCCAATCCTCCATTGATGGCATATTTGTT
AACCAAGCAAAATATCTCAATGATCTCCTCCACACATTGAGAATGACCTCTGTCAAATCTTGTATCACACTAATGTCTACTTCTCTTGATCTTTATACAATTACA
CCACCATTTAATGATCCATCACTTTATCGCAGACTAGTTGGTTCCTTGCAATATCTTACCTTCACTCGTCCTGATATTGCATTCTCTGTAAATCGTGTTAGTCAG
TTCATGCATAAACCAACTGTCATTCACTTTTCAGCCATCAAACGCATCCTCAGATATCTCCGTGGTGATACATCTGATCGACGTTCCACCTCCGGCTTCATCGCC
TTTCTCGGTTCTAATCCAATATCTTGGTCTTCTAAAAAGCAATCTACCGTCTCTTGTTCCTCCACAGAAGCAGAATATTGTTCCCTTGCCACTACTACTGCCAAT
CTTTACTGGATTCGACAGCTTCTATGTGATCTCCATGTTTCCCTTAAGACATCACCAACATTATGGTGTGATAATGTTTCCGCTATATCTCTGGCTCATAATCCA
GTTTTTCATGCTCGCACCAAACACATTGAAATTTATTATCACTTTGTTCGGGAAAAAGTTCTTTGCAAAGACATCTTCATCCATTACATCTCTTCCAACAACCAA
CTTGCTGATATTCTCACAAAGCCACTTCTATCTCCTATATTCCTTCACTTTCGAGACAAACTACTGACTCAACCTGAGTCATCCGTTTGA
Protein sequenceShow/hide protein sequence
MAQPTGFQDKTCLNHVCLLHKSFYGLKQAPRSWFERFTSYLFTLVGSSLTYLLLYVDDIIVTGPDYLYISVLKNQLALDFKISDLGPLKYFLGLKIQSSIDGIFV
NQAKYLNDLLHTLRMTSVKSCITLMSTSLDLYTITPPFNDPSLYRRLVGSLQYLTFTRPDIAFSVNRVSQFMHKPTVIHFSAIKRILRYLRGDTSDRRSTSGFIA
FLGSNPISWSSKKQSTVSCSSTEAEYCSLATTTANLYWIRQLLCDLHVSLKTSPTLWCDNVSAISLAHNPVFHARTKHIEIYYHFVREKVLCKDIFIHYISSNNQ
LADILTKPLLSPIFLHFRDKLLTQPESSV