; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc10g0280681 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc10g0280681
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionIntegrase catalytic domain-containing protein
Genome locationCMiso1.1chr10:18525388..18525951
RNA-Seq ExpressionCmc10g0280681
SyntenyCmc10g0280681
Gene Ontology termsNA
InterPro domainsIPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046354.1 Cysteine-rich RLK (receptor-like protein kinase) 8 [Cucumis melo var. makuwa]1.1e-6982.21Show/hide
Query:  MNAANLLIKYLKGSPGKGIMLPKVQDFPINAFADVDWGSCPDNHRSITGFCVFLGNSLVSWKSKKQQTVARSSAEAEYRTLAVTTCEVIWLRSLLNELQI
        MNA N LIKYLKGSPGKGIMLPKVQDF INAFADVDWG C +   S+TGFCVFLGNSLVSWKSKKQQTVARSS EAEYR LAVTTC+VIWL SL NELQI
Subjt:  MNAANLLIKYLKGSPGKGIMLPKVQDFPINAFADVDWGSCPDNHRSITGFCVFLGNSLVSWKSKKQQTVARSSAEAEYRTLAVTTCEVIWLRSLLNELQI

Query:  KAPSPTLLFYDNQAAIYIANNPMFHERTKHIELDCHFVRDRKTDGSIKLLPVRSSSLLVDVFT
        KA S  LLF DNQA IYI NNPMFHERTKHI+LDCHFVRDR  DGSIKLLP+RSS+ L D+FT
Subjt:  KAPSPTLLFYDNQAAIYIANNPMFHERTKHIELDCHFVRDRKTDGSIKLLPVRSSSLLVDVFT

KAA0068025.1 Cysteine-rich RLK (receptor-like protein kinase) 8 [Cucumis melo var. makuwa]1.2e-7088.24Show/hide
Query:  MNAANLLIKYLKGSPGKGIMLPKVQDFPINAFADVDWGSCPDNHRSITGFCVFLGNSLVSWKSKKQQTVARSSAEAEYRTLAVTTCEVIWLRSLLNELQI
        MNAAN LIKYLKGSPGKGIMLPKVQDF INAFAD +WGS  D  RS+TGFCVFLGNSLVSWKSKKQQTVARSSAEAEY+ L VTTCEVIWLRSLLNEL+I
Subjt:  MNAANLLIKYLKGSPGKGIMLPKVQDFPINAFADVDWGSCPDNHRSITGFCVFLGNSLVSWKSKKQQTVARSSAEAEYRTLAVTTCEVIWLRSLLNELQI

Query:  KAPSPTLLFYDNQAAIYIANNPMFHERTKHIELDCHFVRDRKTDGSIKLLPVR
        KAPSP LLF DNQAAIYIANNPMFHE+TKHIELDCHFVRDR  DGSIKLLPVR
Subjt:  KAPSPTLLFYDNQAAIYIANNPMFHERTKHIELDCHFVRDRKTDGSIKLLPVR

PON99369.1 hypothetical protein TorRG33x02_049120 [Trema orientale]5.6e-6360.75Show/hide
Query:  MNAANLLIKYLKGSPGKGIMLPKVQDFPINAFADVDWGSCPDNHRSITGFCVFLGNSLVSWKSKKQQTVARSSAEAEYRTLAVTTCEVIWLRSLLNELQI
        + AA+ L++YLK  PG+G+         + AF+D DWGSCPD  +S+TGFC+FLG+SLVSWK+KKQ T++RSSAEAEYR LA TT E++ L++LL++ Q+
Subjt:  MNAANLLIKYLKGSPGKGIMLPKVQDFPINAFADVDWGSCPDNHRSITGFCVFLGNSLVSWKSKKQQTVARSSAEAEYRTLAVTTCEVIWLRSLLNELQI

Query:  KAPSPTLLFYDNQAAIYIANNPMFHERTKHIELDCHFVRDRKTDGSIKLLPVRSSSLLVDVFTKPLPASILFHLIDKMSVQDIFAP
           SP LLF DNQAAIYIA+NP FHERTKHIELDCHFVRD+ + GS+KLLP+RS   L D+FTKPL +S+LF L+ KM+V DI++P
Subjt:  KAPSPTLLFYDNQAAIYIANNPMFHERTKHIELDCHFVRDRKTDGSIKLLPVRSSSLLVDVFTKPLPASILFHLIDKMSVQDIFAP

TYK28978.1 putative mitochondrial protein [Cucumis melo var. makuwa]5.2e-6996.4Show/hide
Query:  GFCVFLGNSLVSWKSKKQQTVARSSAEAEYRTLAVTTCEVIWLRSLLNELQIKAPSPTLLFYDNQAAIYIANNPMFHERTKHIELDCHFVRDRKTDGSIK
        GFCVFLGNSLVSWKSKKQQTVARSSAEAEYRTLA TTCEVIWLRSLLNELQIKAPSPTLLFYD+QAAIYIANNPMFHERTKHIELDCHFVRDRKTDGSIK
Subjt:  GFCVFLGNSLVSWKSKKQQTVARSSAEAEYRTLAVTTCEVIWLRSLLNELQIKAPSPTLLFYDNQAAIYIANNPMFHERTKHIELDCHFVRDRKTDGSIK

Query:  LLPVRSSSLLVDVFTKPLPASILFHLIDKMSVQDIFAPP
        LLPV+SSSLLVDVFTKPLPASILFHLI KM VQDIFAPP
Subjt:  LLPVRSSSLLVDVFTKPLPASILFHLIDKMSVQDIFAPP

XP_022887164.1 uncharacterized protein LOC111403045 [Olea europaea var. sylvestris]8.9e-6159.67Show/hide
Query:  LIKYLKGSPGKGIMLPKVQDFPINAFADVDWGSCPDNHRSITGFCVFLGNSLVSWKSKKQQTVARSSAEAEYRTLAVTTCEVIWLRSLLNELQIKAPSPT
        L++YLK +PG+G++        + AFAD DWG+C D+ +S+TGFCVFLG+SL+SWK+KKQQT++RSSAEAEYR LA T  E+ W+  LL + QI +P+  
Subjt:  LIKYLKGSPGKGIMLPKVQDFPINAFADVDWGSCPDNHRSITGFCVFLGNSLVSWKSKKQQTVARSSAEAEYRTLAVTTCEVIWLRSLLNELQIKAPSPT

Query:  LLFYDNQAAIYIANNPMFHERTKHIELDCHFVRDRKTDGSIKLLPVRSSSLLVDVFTKPLPASILFHLIDKMSVQDIFAPP
        L+F DNQAAI+IANNP+FHERTKHIE+DCH++RD+ T+GSIKLLPVR+ + L DVFTK LP++ LF L+ KM+V D+  PP
Subjt:  LLFYDNQAAIYIANNPMFHERTKHIELDCHFVRDRKTDGSIKLLPVRSSSLLVDVFTKPLPASILFHLIDKMSVQDIFAPP

TrEMBL top hitse value%identityAlignment
A0A2P5FNK4 Uncharacterized protein2.7e-6360.75Show/hide
Query:  MNAANLLIKYLKGSPGKGIMLPKVQDFPINAFADVDWGSCPDNHRSITGFCVFLGNSLVSWKSKKQQTVARSSAEAEYRTLAVTTCEVIWLRSLLNELQI
        + AA+ L++YLK  PG+G+         + AF+D DWGSCPD  +S+TGFC+FLG+SLVSWK+KKQ T++RSSAEAEYR LA TT E++ L++LL++ Q+
Subjt:  MNAANLLIKYLKGSPGKGIMLPKVQDFPINAFADVDWGSCPDNHRSITGFCVFLGNSLVSWKSKKQQTVARSSAEAEYRTLAVTTCEVIWLRSLLNELQI

Query:  KAPSPTLLFYDNQAAIYIANNPMFHERTKHIELDCHFVRDRKTDGSIKLLPVRSSSLLVDVFTKPLPASILFHLIDKMSVQDIFAP
           SP LLF DNQAAIYIA+NP FHERTKHIELDCHFVRD+ + GS+KLLP+RS   L D+FTKPL +S+LF L+ KM+V DI++P
Subjt:  KAPSPTLLFYDNQAAIYIANNPMFHERTKHIELDCHFVRDRKTDGSIKLLPVRSSSLLVDVFTKPLPASILFHLIDKMSVQDIFAP

A0A5A7TTG6 Cysteine-rich RLK (Receptor-like protein kinase) 85.1e-7082.21Show/hide
Query:  MNAANLLIKYLKGSPGKGIMLPKVQDFPINAFADVDWGSCPDNHRSITGFCVFLGNSLVSWKSKKQQTVARSSAEAEYRTLAVTTCEVIWLRSLLNELQI
        MNA N LIKYLKGSPGKGIMLPKVQDF INAFADVDWG C +   S+TGFCVFLGNSLVSWKSKKQQTVARSS EAEYR LAVTTC+VIWL SL NELQI
Subjt:  MNAANLLIKYLKGSPGKGIMLPKVQDFPINAFADVDWGSCPDNHRSITGFCVFLGNSLVSWKSKKQQTVARSSAEAEYRTLAVTTCEVIWLRSLLNELQI

Query:  KAPSPTLLFYDNQAAIYIANNPMFHERTKHIELDCHFVRDRKTDGSIKLLPVRSSSLLVDVFT
        KA S  LLF DNQA IYI NNPMFHERTKHI+LDCHFVRDR  DGSIKLLP+RSS+ L D+FT
Subjt:  KAPSPTLLFYDNQAAIYIANNPMFHERTKHIELDCHFVRDRKTDGSIKLLPVRSSSLLVDVFT

A0A5A7VQN7 Cysteine-rich RLK (Receptor-like protein kinase) 86.0e-7188.24Show/hide
Query:  MNAANLLIKYLKGSPGKGIMLPKVQDFPINAFADVDWGSCPDNHRSITGFCVFLGNSLVSWKSKKQQTVARSSAEAEYRTLAVTTCEVIWLRSLLNELQI
        MNAAN LIKYLKGSPGKGIMLPKVQDF INAFAD +WGS  D  RS+TGFCVFLGNSLVSWKSKKQQTVARSSAEAEY+ L VTTCEVIWLRSLLNEL+I
Subjt:  MNAANLLIKYLKGSPGKGIMLPKVQDFPINAFADVDWGSCPDNHRSITGFCVFLGNSLVSWKSKKQQTVARSSAEAEYRTLAVTTCEVIWLRSLLNELQI

Query:  KAPSPTLLFYDNQAAIYIANNPMFHERTKHIELDCHFVRDRKTDGSIKLLPVR
        KAPSP LLF DNQAAIYIANNPMFHE+TKHIELDCHFVRDR  DGSIKLLPVR
Subjt:  KAPSPTLLFYDNQAAIYIANNPMFHERTKHIELDCHFVRDRKTDGSIKLLPVR

A0A5D3DZU4 Putative mitochondrial protein2.5e-6996.4Show/hide
Query:  GFCVFLGNSLVSWKSKKQQTVARSSAEAEYRTLAVTTCEVIWLRSLLNELQIKAPSPTLLFYDNQAAIYIANNPMFHERTKHIELDCHFVRDRKTDGSIK
        GFCVFLGNSLVSWKSKKQQTVARSSAEAEYRTLA TTCEVIWLRSLLNELQIKAPSPTLLFYD+QAAIYIANNPMFHERTKHIELDCHFVRDRKTDGSIK
Subjt:  GFCVFLGNSLVSWKSKKQQTVARSSAEAEYRTLAVTTCEVIWLRSLLNELQIKAPSPTLLFYDNQAAIYIANNPMFHERTKHIELDCHFVRDRKTDGSIK

Query:  LLPVRSSSLLVDVFTKPLPASILFHLIDKMSVQDIFAPP
        LLPV+SSSLLVDVFTKPLPASILFHLI KM VQDIFAPP
Subjt:  LLPVRSSSLLVDVFTKPLPASILFHLIDKMSVQDIFAPP

A0A6J1C0G9 uncharacterized protein LOC1110069441.4e-5960.87Show/hide
Query:  AANLLIKYLKGSPGKGIMLPKVQDFPINAFADVDWGSCPDNHRSITGFCVFLGNSLVSWKSKKQQTVARSSAEAEYRTLAVTTCEVIWLRSLLNELQIKA
        AA  L++YLKGSPG+G+ L     F + AFAD DWGSCPD  RS TGFCVF+G SLVSWKSKKQ T++RSSAEAEYR LA  +CE++WL  LL +LQ+  
Subjt:  AANLLIKYLKGSPGKGIMLPKVQDFPINAFADVDWGSCPDNHRSITGFCVFLGNSLVSWKSKKQQTVARSSAEAEYRTLAVTTCEVIWLRSLLNELQIKA

Query:  PSPTLLFYDNQAAIYIANNPMFHERTKHIELDCHFVRDRKTDGSIKLLPVRSSSLLVDVFTKPLPASILFHLIDKMSVQDIFAP
          P L+F DNQAAI++A NP+FHERTKHIELDC FVRDR  DG ++LLP RS+  L D FTKPL + I   L+ KM + +I+ P
Subjt:  PSPTLLFYDNQAAIYIANNPMFHERTKHIELDCHFVRDRKTDGSIKLLPVRSSSLLVDVFTKPLPASILFHLIDKMSVQDIFAP

SwissProt top hitse value%identityAlignment
P04146 Copia protein3.0e-2736.72Show/hide
Query:  LIKYLKGSPGKGIMLPKVQDF--PINAFADVDWGSCPDNHRSITGFCVFLGN-SLVSWKSKKQQTVARSSAEAEYRTLAVTTCEVIWLRSLLNELQIKAP
        +++YLKG+    ++  K   F   I  + D DW     + +S TG+   + + +L+ W +K+Q +VA SS EAEY  L     E +WL+ LL  + IK  
Subjt:  LIKYLKGSPGKGIMLPKVQDF--PINAFADVDWGSCPDNHRSITGFCVFLGN-SLVSWKSKKQQTVARSSAEAEYRTLAVTTCEVIWLRSLLNELQIKAP

Query:  SPTLLFYDNQAAIYIANNPMFHERTKHIELDCHFVRDRKTDGSIKLLPVRSSSLLVDVFTKPLPASILFHLIDKMSV
        +P  ++ DNQ  I IANNP  H+R KHI++  HF R++  +  I L  + + + L D+FTKPLPA+    L DK+ +
Subjt:  SPTLLFYDNQAAIYIANNPMFHERTKHIELDCHFVRDRKTDGSIKLLPVRSSSLLVDVFTKPLPASILFHLIDKMSV

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-941.9e-2133.33Show/hide
Query:  AANLLIKYLKGSPGKGIMLPKVQDFPINAFADVDWGSCPDNHRSITGFCVFLGNSLVSWKSKKQQTVARSSAEAEYRTLAVTTCEVIWLRSLLNELQIKA
        A   +++YL+G+ G  +      D  +  + D D     DN +S TG+        +SW+SK Q+ VA S+ EAEY     T  E+IWL+  L EL +  
Subjt:  AANLLIKYLKGSPGKGIMLPKVQDFPINAFADVDWGSCPDNHRSITGFCVFLGNSLVSWKSKKQQTVARSSAEAEYRTLAVTTCEVIWLRSLLNELQIKA

Query:  PSPTLLFYDNQAAIYIANNPMFHERTKHIELDCHFVRDRKTDGSIKLLPVRSSSLLVDVFTKPLP
            +++ D+Q+AI ++ N M+H RTKHI++  H++R+   D S+K+L + ++    D+ TK +P
Subjt:  PSPTLLFYDNQAAIYIANNPMFHERTKHIELDCHFVRDRKTDGSIKLLPVRSSSLLVDVFTKPLP

P92519 Uncharacterized mitochondrial protein AtMg008101.3e-1745.24Show/hide
Query:  LIKYLKGSPGKGIMLPKVQDFPINAFADVDWGSCPDNHRSITGFCVFLGNSLVSWKSKKQQTVARSSAEAEYRTLAVTTCEVIW
        +++Y+KG+   G+ + K     + AF D DW  C    RS TGFC FLG +++SW +K+Q TV+RSS E EYR LA+T  E+ W
Subjt:  LIKYLKGSPGKGIMLPKVQDFPINAFADVDWGSCPDNHRSITGFCVFLGNSLVSWKSKKQQTVARSSAEAEYRTLAVTTCEVIW

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE11.6e-3639.04Show/hide
Query:  MNAANLLIKYLKGSPGKGIMLPKVQDFPINAFADVDWGSCPDNHRSITGFCVFLGNSLVSWKSKKQQTVARSSAEAEYRTLAVTTCEVIWLRSLLNELQI
        + A   +++YL G+P  GI L K     ++A++D DW    D++ S  G+ V+LG+  +SW SKKQ+ V RSS EAEYR++A T+ E+ W+ SLL EL I
Subjt:  MNAANLLIKYLKGSPGKGIMLPKVQDFPINAFADVDWGSCPDNHRSITGFCVFLGNSLVSWKSKKQQTVARSSAEAEYRTLAVTTCEVIWLRSLLNELQI

Query:  KAPSPTLLFYDNQAAIYIANNPMFHERTKHIELDCHFVRDRKTDGSIKLLPVRSSSLLVDVFTKPLPASILFHLIDKMSVQDIFAPP
        +   P +++ DN  A Y+  NP+FH R KHI +D HF+R++   G+++++ V +   L D  TKPL  +   +   K+ V  +  PP
Subjt:  KAPSPTLLFYDNQAAIYIANNPMFHERTKHIELDCHFVRDRKTDGSIKLLPVRSSSLLVDVFTKPLPASILFHLIDKMSVQDIFAPP

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE22.7e-3640.86Show/hide
Query:  NAANLLIKYLKGSPGKGIMLPKVQDFPINAFADVDWGSCPDNHRSITGFCVFLGNSLVSWKSKKQQTVARSSAEAEYRTLAVTTCEVIWLRSLLNELQIK
        NA   +++YL G+P  GI L K     ++A++D DW    D++ S  G+ V+LG+  +SW SKKQ+ V RSS EAEYR++A T+ E+ W+ SLL EL I+
Subjt:  NAANLLIKYLKGSPGKGIMLPKVQDFPINAFADVDWGSCPDNHRSITGFCVFLGNSLVSWKSKKQQTVARSSAEAEYRTLAVTTCEVIWLRSLLNELQIK

Query:  APSPTLLFYDNQAAIYIANNPMFHERTKHIELDCHFVRDRKTDGSIKLLPVRSSSLLVDVFTKPLPASILFHLIDKMSVQDIFAPP
           P +++ DN  A Y+  NP+FH R KHI LD HF+R++   G+++++ V +   L D  TKPL      +   K+ V  I  PP
Subjt:  APSPTLLFYDNQAAIYIANNPMFHERTKHIELDCHFVRDRKTDGSIKLLPVRSSSLLVDVFTKPLPASILFHLIDKMSVQDIFAPP

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 82.7e-3953.33Show/hide
Query:  LIKYLKGSPGKGIMLPKVQDFPINAFADVDWGSCPDNHRSITGFCVFLGNSLVSWKSKKQQTVARSSAEAEYRTLAVTTCEVIWLRSLLNELQIKAPSPT
        ++ Y+KG+ G+G+      +  +  F+D  + SC D  RS  G+C+FLG SL+SWKSKKQQ V++SSAEAEYR L+  T E++WL     ELQ+    PT
Subjt:  LIKYLKGSPGKGIMLPKVQDFPINAFADVDWGSCPDNHRSITGFCVFLGNSLVSWKSKKQQTVARSSAEAEYRTLAVTTCEVIWLRSLLNELQIKAPSPT

Query:  LLFYDNQAAIYIANNPMFHERTKHIELDCHFVRDR
        LLF DN AAI+IA N +FHERTKHIE DCH VR+R
Subjt:  LLFYDNQAAIYIANNPMFHERTKHIELDCHFVRDR

ATMG00240.1 Gag-Pol-related retrotransposon family protein4.5e-1047.06Show/hide
Query:  MNAANLLIKYLKGSPGKGIMLPKVQDFPINAFADVDWGSCPDNHRSITGFC
        M A   ++ Y+KG+ G+G+      D  + AFAD DW SCPD  RS+TGFC
Subjt:  MNAANLLIKYLKGSPGKGIMLPKVQDFPINAFADVDWGSCPDNHRSITGFC

ATMG00810.1 DNA/RNA polymerases superfamily protein9.0e-1945.24Show/hide
Query:  LIKYLKGSPGKGIMLPKVQDFPINAFADVDWGSCPDNHRSITGFCVFLGNSLVSWKSKKQQTVARSSAEAEYRTLAVTTCEVIW
        +++Y+KG+   G+ + K     + AF D DW  C    RS TGFC FLG +++SW +K+Q TV+RSS E EYR LA+T  E+ W
Subjt:  LIKYLKGSPGKGIMLPKVQDFPINAFADVDWGSCPDNHRSITGFCVFLGNSLVSWKSKKQQTVARSSAEAEYRTLAVTTCEVIW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATGCAGCCAACCTCCTAATCAAATATCTCAAAGGGTCCCCTGGAAAAGGCATCATGCTACCTAAAGTTCAAGACTTCCCAATAAATGCTTTTGCTGATGTAGATTG
GGGCTCCTGCCCAGACAACCATCGCTCAATCACGGGGTTTTGTGTTTTCCTTGGAAACTCCCTTGTTTCTTGGAAATCAAAGAAGCAACAAACAGTAGCAAGATCATCCG
CAGAAGCTGAATATCGAACTCTAGCTGTCACTACATGTGAAGTCATATGGCTTCGCAGCCTCCTTAATGAACTACAAATTAAAGCTCCATCTCCAACCCTCCTTTTTTAT
GACAATCAAGCCGCCATCTACATTGCAAATAATCCTATGTTCCATGAAAGAACCAAACACATCGAGCTAGATTGCCATTTTGTTCGAGACAGAAAAACAGATGGATCCAT
CAAACTGTTACCAGTTCGGTCTTCCAGTCTGCTTGTAGACGTTTTTACAAAGCCTCTCCCAGCAAGCATCCTGTTTCACTTGATAGACAAGATGAGTGTCCAAGACATAT
TTGCCCCACCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAATGCAGCCAACCTCCTAATCAAATATCTCAAAGGGTCCCCTGGAAAAGGCATCATGCTACCTAAAGTTCAAGACTTCCCAATAAATGCTTTTGCTGATGTAGATTG
GGGCTCCTGCCCAGACAACCATCGCTCAATCACGGGGTTTTGTGTTTTCCTTGGAAACTCCCTTGTTTCTTGGAAATCAAAGAAGCAACAAACAGTAGCAAGATCATCCG
CAGAAGCTGAATATCGAACTCTAGCTGTCACTACATGTGAAGTCATATGGCTTCGCAGCCTCCTTAATGAACTACAAATTAAAGCTCCATCTCCAACCCTCCTTTTTTAT
GACAATCAAGCCGCCATCTACATTGCAAATAATCCTATGTTCCATGAAAGAACCAAACACATCGAGCTAGATTGCCATTTTGTTCGAGACAGAAAAACAGATGGATCCAT
CAAACTGTTACCAGTTCGGTCTTCCAGTCTGCTTGTAGACGTTTTTACAAAGCCTCTCCCAGCAAGCATCCTGTTTCACTTGATAGACAAGATGAGTGTCCAAGACATAT
TTGCCCCACCTTGA
Protein sequenceShow/hide protein sequence
MNAANLLIKYLKGSPGKGIMLPKVQDFPINAFADVDWGSCPDNHRSITGFCVFLGNSLVSWKSKKQQTVARSSAEAEYRTLAVTTCEVIWLRSLLNELQIKAPSPTLLFY
DNQAAIYIANNPMFHERTKHIELDCHFVRDRKTDGSIKLLPVRSSSLLVDVFTKPLPASILFHLIDKMSVQDIFAPP