; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc10g0280701 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc10g0280701
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionTransposon Ty3-G Gag-Pol polyprotein
Genome locationCMiso1.1chr10:18532445..18533335
RNA-Seq ExpressionCmc10g0280701
SyntenyCmc10g0280701
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
InterPro domainsIPR012337 - Ribonuclease H-like superfamily
IPR016197 - Chromo-like domain superfamily
IPR036397 - Ribonuclease H superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032312.1 Transposon Ty3-G Gag-Pol polyprotein [Cucumis melo var. makuwa]5.5e-11366.67Show/hide
Query:  MFRMPDTTLNKSTAYHPQSDGQTEVENKGLERYLRCFCSEKPKEWVAWLPWPEFWYNTTFQRALGVTPFQVVYGWKPP-LLSYGDGDTSNSTLDKKLREK
        MFR+    LN+STAYHPQSDGQTEV N+GLE YL CFCSE+PKEWV+WLPW E+WYNTTF R+LG +PFQV+YG KPP LLSYG+G T+NSTL  +L+E+
Subjt:  MFRMPDTTLNKSTAYHPQSDGQTEVENKGLERYLRCFCSEKPKEWVAWLPWPEFWYNTTFQRALGVTPFQVVYGWKPP-LLSYGDGDTSNSTLDKKLREK

Query:  DIVLAVFCEHLLLAQQQMKQYPNRKRRNVEYQIGELVFLKIRPYRQLTLRRKRNEKFSPKYFGSYKILKKVGSVAYMLDLPVNTSIHPVFHVSQLKKFVG
          VLA   E LLL  QQMKQY ++KRR+VE+ +G+ V LKIRPYRQL+LR+KRN+K SPKYFG Y+I  KV +VAY LDLP +  IHPVFHVSQLK+FVG
Subjt:  DIVLAVFCEHLLLAQQQMKQYPNRKRRNVEYQIGELVFLKIRPYRQLTLRRKRNEKFSPKYFGSYKILKKVGSVAYMLDLPVNTSIHPVFHVSQLKKFVG

Query:  DHSNVQPTIQYVNENFEWKAQPEEIHRYQKNKAGSWKVPICWEGLPGHEASWESYDDMQRLYPNLHLEDKVNLERGSNVR-PPIRFHYSRRKKEKSH
        D + +QPT+Q+VNEN EW+AQPEE+ +YQKNKAG+W+V I W+ LP HEA WESYD++Q+ +P  HLEDKVNLE   NVR PPI+F Y R  K KSH
Subjt:  DHSNVQPTIQYVNENFEWKAQPEEIHRYQKNKAGSWKVPICWEGLPGHEASWESYDDMQRLYPNLHLEDKVNLERGSNVR-PPIRFHYSRRKKEKSH

KAA0040882.1 transposon Ty3-G Gag-Pol polyprotein [Cucumis melo var. makuwa]1.1e-11365.75Show/hide
Query:  MFRMPDTTLNKSTAYHPQSDGQTEVENKGLERYLRCFCSEKPKEWVAWLPWPEFWYNTTFQRALGVTPFQVVYGWKPP-LLSYGDGDTSNSTLDKKLREK
        +FR+  T LN++TAYHPQSDGQTEV N+G+E YL CFC+EKP+EWV WLPW E+WYNTTFQRA+G+TPFQ+VYG +PP ++SYG   + NST+++ L+E+
Subjt:  MFRMPDTTLNKSTAYHPQSDGQTEVENKGLERYLRCFCSEKPKEWVAWLPWPEFWYNTTFQRALGVTPFQVVYGWKPP-LLSYGDGDTSNSTLDKKLREK

Query:  DIVLAVFCEHLLLAQQQMKQYPNRKRRNVEYQIGELVFLKIRPYRQLTLRRKRNEKFSPKYFGSYKILKKVGSVAYMLDLPVNTSIHPVFHVSQLKKFVG
        D VL   CEHL LAQ+QMK Y +RKR NVEY +G+ VFL+IRPYRQ TL RKRNEK SP++FG YKI++KVG VAY L+LP ++ IHPVFH+SQL+K VG
Subjt:  DIVLAVFCEHLLLAQQQMKQYPNRKRRNVEYQIGELVFLKIRPYRQLTLRRKRNEKFSPKYFGSYKILKKVGSVAYMLDLPVNTSIHPVFHVSQLKKFVG

Query:  DHSNVQPTIQYVNENFEWKAQPEEIHRYQKNKAGSWKVPICWEGLPGHEASWESYDDMQRLYPNLHLEDKVNLERGSNVRPPIRFHYSRRKK
         H N+QPTIQ+VNEN+EWK+ PEE   Y+K  AG W+V + WEGLP HEA+WESYD+MQ  YP  HLEDKVNL+ GSNVRP I+  YSRRKK
Subjt:  DHSNVQPTIQYVNENFEWKAQPEEIHRYQKNKAGSWKVPICWEGLPGHEASWESYDDMQRLYPNLHLEDKVNLERGSNVRPPIRFHYSRRKK

KAA0047643.1 putative retroelement pol polyprotein [Cucumis melo var. makuwa]2.1e-11264.73Show/hide
Query:  MFRMPDTTLNKSTAYHPQSDGQTEVENKGLERYLRCFCSEKPKEWVAWLPWPEFWYNTTFQRALGVTPFQVVYGWKPP-LLSYGDGDTSNSTLDKKLREK
        +F+M  T L KSTAYHPQ+DGQTEV N+GLE YLRCFCSE+PKEW+ WLPW E+WYNTT+Q+ALG +PFQVVYG KPP LLSYG+  TSNS++D++L+E+
Subjt:  MFRMPDTTLNKSTAYHPQSDGQTEVENKGLERYLRCFCSEKPKEWVAWLPWPEFWYNTTFQRALGVTPFQVVYGWKPP-LLSYGDGDTSNSTLDKKLREK

Query:  DIVLAVFCEHLLLAQQQMKQYPNRKRRNVEYQIGELVFLKIRPYRQLTLRRKRNEKFSPKYFGSYKILKKVGSVAYMLDLPVNTSIHPVFHVSQLKKFVG
        ++ L    EHLLLAQQQMK Y +RKRR VE+Q+ ELV LKIRPYRQ TLR KRNEK S +YFG YKIL+++G VAY L+LP + +IHPVFHVSQLKKFV 
Subjt:  DIVLAVFCEHLLLAQQQMKQYPNRKRRNVEYQIGELVFLKIRPYRQLTLRRKRNEKFSPKYFGSYKILKKVGSVAYMLDLPVNTSIHPVFHVSQLKKFVG

Query:  DHSNVQPTIQYVNENFEWKAQPEEIHRYQKNKAGSWKVPICWEGLPGHEASWESYDDMQRLYPNLHLEDKVNLERGSNVRPPIRFHYSRRKK
          +N+ PT+Q + E  EW++QPEE   Y+++K G W+V + W+ LP +EASWE YD+M + YPNLHLEDKVNL+ GSNVRPPI+  Y RR K
Subjt:  DHSNVQPTIQYVNENFEWKAQPEEIHRYQKNKAGSWKVPICWEGLPGHEASWESYDDMQRLYPNLHLEDKVNLERGSNVRPPIRFHYSRRKK

KAA0050450.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]9.6e-11872.99Show/hide
Query:  MFRMPDTTLNKSTAYHPQSDGQTEVENKGLERYLRCFCSEKPKEWVAWLPWPEFWYNTTFQRALGVTPFQVVYGWKPP-LLSYGDGDTSNSTLDKKLREK
        MFR+  T LNKSTAYH QSDGQTEV N+GLE YLRCFCSEKPKEWV+WL W EFWYNTTFQR L V+ FQVVYG KPP LLSYG+G+TSNSTLD++LRE+
Subjt:  MFRMPDTTLNKSTAYHPQSDGQTEVENKGLERYLRCFCSEKPKEWVAWLPWPEFWYNTTFQRALGVTPFQVVYGWKPP-LLSYGDGDTSNSTLDKKLREK

Query:  DIVLAVFCEHLLLAQQQMKQYPNRKRRNVEYQIGELVFLKIRPYRQLTLRRKRNEKFSPKYFGSYKILKKVGSVAYMLDLPVNTSIHPVFHVSQLKKFVG
        D++LA   EHL+LAQQQMKQY + KRR VEYQ+G+LVFLKIRP+RQLTLRRKRNEK SPKYFG YKI++++G+V Y LDLP NTSI+ +FHVSQLKK VG
Subjt:  DIVLAVFCEHLLLAQQQMKQYPNRKRRNVEYQIGELVFLKIRPYRQLTLRRKRNEKFSPKYFGSYKILKKVGSVAYMLDLPVNTSIHPVFHVSQLKKFVG

Query:  DHSNVQPTIQYVNENFEWKAQPEEIHRYQKNKAGSWKVPICWEGLPGHEASWESYDDMQRLYPNLHLEDKVNLE
        DH+ VQPTIQY+NEN EW+AQPE+I  Y+KNKA  W+V ICW+G P HEASWE YD++ +LYP+LHLEDK+ L+
Subjt:  DHSNVQPTIQYVNENFEWKAQPEEIHRYQKNKAGSWKVPICWEGLPGHEASWESYDDMQRLYPNLHLEDKVNLE

TYK28980.1 T32E20.30 [Cucumis melo var. makuwa]1.2e-17197.3Show/hide
Query:  MFRMPDTTLNKSTAYHPQSDGQTEVENKGLERYLRCFCSEKPKEWVAWLPWPEFWYNTTFQRALGVTPFQVVYGWKPPLLSYGDGDTSNSTLDKKLREKD
        MFRMPDT LNKST YHPQSDGQTEVENKGLERYLRCFCSEKPKEWVAWLPWPEFWYNTTFQRALGVTPFQVVYGWKPPLLSYGDGDTSNSTLD+KLREKD
Subjt:  MFRMPDTTLNKSTAYHPQSDGQTEVENKGLERYLRCFCSEKPKEWVAWLPWPEFWYNTTFQRALGVTPFQVVYGWKPPLLSYGDGDTSNSTLDKKLREKD

Query:  IVLAVFCEHLLLAQQQMKQYPNRKRRNVEYQIGELVFLKIRPYRQLTLRRKRNEKFSPKYFGSYKILKKVGSVAYMLDLPVNTSIHPVFHVSQLKKFVGD
        IVLAVFCEHLLLAQQQMKQYP+RKRRNVEYQIGELVFLKIRPYRQLTLRRKRN+KFSPKYFGSYKI KKVGSVAYMLDLPVNTSIHPVFHVSQLKKFVGD
Subjt:  IVLAVFCEHLLLAQQQMKQYPNRKRRNVEYQIGELVFLKIRPYRQLTLRRKRNEKFSPKYFGSYKILKKVGSVAYMLDLPVNTSIHPVFHVSQLKKFVGD

Query:  HSNVQPTIQYVNENFEWKAQPEEIHRYQKNKAGSWKVPICWEGLPGHEASWESYDDMQRLYPNLHLEDKVNLERGSNVRPPIRFHYSRRKKEKSHV
        HSNVQPTIQYVNENFEWKAQPEEIHRYQKNKAGSWKVPICWEGLPGHEASWESY+DMQRLYPNLHLEDKVNLER SNVRPPIRFHYSRRKKEKSHV
Subjt:  HSNVQPTIQYVNENFEWKAQPEEIHRYQKNKAGSWKVPICWEGLPGHEASWESYDDMQRLYPNLHLEDKVNLERGSNVRPPIRFHYSRRKKEKSHV

TrEMBL top hitse value%identityAlignment
A0A5A7SMR6 Ty3/gypsy retrotransposon protein1.0e-11263.36Show/hide
Query:  MFRMPDTTLNKSTAYHPQSDGQTEVENKGLERYLRCFCSEKPKEWVAWLPWPEFWYNTTFQRALGVTPFQVVYGWKPP-LLSYGDGDTSNSTLDKKLREK
        +FR+  T LNKSTAYHPQSDGQTEV N+G+E YLRCFC+EKPKEW+ WLPW E+WYNTT+QR++G+TPFQVVYG +PP ++SYG   + NST+++ L+E+
Subjt:  MFRMPDTTLNKSTAYHPQSDGQTEVENKGLERYLRCFCSEKPKEWVAWLPWPEFWYNTTFQRALGVTPFQVVYGWKPP-LLSYGDGDTSNSTLDKKLREK

Query:  DIVLAVFCEHLLLAQQQMKQYPNRKRRNVEYQIGELVFLKIRPYRQLTLRRKRNEKFSPKYFGSYKILKKVGSVAYMLDLPVNTSIHPVFHVSQLKKFVG
        DIVL    EHL LAQ+QMK Y +RKRR+VE+ +GE V L+IRPYRQ+T+R +RNEK +P++FG Y+I++K+G VAY L LP N+ IHPVFHVSQL+K VG
Subjt:  DIVLAVFCEHLLLAQQQMKQYPNRKRRNVEYQIGELVFLKIRPYRQLTLRRKRNEKFSPKYFGSYKILKKVGSVAYMLDLPVNTSIHPVFHVSQLKKFVG

Query:  DHSNVQPTIQYVNENFEWKAQPEEIHRYQKNKAGSWKVPICWEGLPGHEASWESYDDMQRLYPNLHLEDKVNLERGSNVRPPIRFHYSRRKK
         H N+QPTIQ+V+EN+ WK++PEE+  Y+K  A  W+V +CW+GLP HEASWESY++M+  +P LHLEDKVNL+ GSN RP I+  YSRRKK
Subjt:  DHSNVQPTIQYVNENFEWKAQPEEIHRYQKNKAGSWKVPICWEGLPGHEASWESYDDMQRLYPNLHLEDKVNLERGSNVRPPIRFHYSRRKK

A0A5A7TBP9 Transposon Ty3-G Gag-Pol polyprotein5.3e-11465.75Show/hide
Query:  MFRMPDTTLNKSTAYHPQSDGQTEVENKGLERYLRCFCSEKPKEWVAWLPWPEFWYNTTFQRALGVTPFQVVYGWKPP-LLSYGDGDTSNSTLDKKLREK
        +FR+  T LN++TAYHPQSDGQTEV N+G+E YL CFC+EKP+EWV WLPW E+WYNTTFQRA+G+TPFQ+VYG +PP ++SYG   + NST+++ L+E+
Subjt:  MFRMPDTTLNKSTAYHPQSDGQTEVENKGLERYLRCFCSEKPKEWVAWLPWPEFWYNTTFQRALGVTPFQVVYGWKPP-LLSYGDGDTSNSTLDKKLREK

Query:  DIVLAVFCEHLLLAQQQMKQYPNRKRRNVEYQIGELVFLKIRPYRQLTLRRKRNEKFSPKYFGSYKILKKVGSVAYMLDLPVNTSIHPVFHVSQLKKFVG
        D VL   CEHL LAQ+QMK Y +RKR NVEY +G+ VFL+IRPYRQ TL RKRNEK SP++FG YKI++KVG VAY L+LP ++ IHPVFH+SQL+K VG
Subjt:  DIVLAVFCEHLLLAQQQMKQYPNRKRRNVEYQIGELVFLKIRPYRQLTLRRKRNEKFSPKYFGSYKILKKVGSVAYMLDLPVNTSIHPVFHVSQLKKFVG

Query:  DHSNVQPTIQYVNENFEWKAQPEEIHRYQKNKAGSWKVPICWEGLPGHEASWESYDDMQRLYPNLHLEDKVNLERGSNVRPPIRFHYSRRKK
         H N+QPTIQ+VNEN+EWK+ PEE   Y+K  AG W+V + WEGLP HEA+WESYD+MQ  YP  HLEDKVNL+ GSNVRP I+  YSRRKK
Subjt:  DHSNVQPTIQYVNENFEWKAQPEEIHRYQKNKAGSWKVPICWEGLPGHEASWESYDDMQRLYPNLHLEDKVNLERGSNVRPPIRFHYSRRKK

A0A5A7U5F9 Ty3/gypsy retrotransposon protein4.7e-11872.99Show/hide
Query:  MFRMPDTTLNKSTAYHPQSDGQTEVENKGLERYLRCFCSEKPKEWVAWLPWPEFWYNTTFQRALGVTPFQVVYGWKPP-LLSYGDGDTSNSTLDKKLREK
        MFR+  T LNKSTAYH QSDGQTEV N+GLE YLRCFCSEKPKEWV+WL W EFWYNTTFQR L V+ FQVVYG KPP LLSYG+G+TSNSTLD++LRE+
Subjt:  MFRMPDTTLNKSTAYHPQSDGQTEVENKGLERYLRCFCSEKPKEWVAWLPWPEFWYNTTFQRALGVTPFQVVYGWKPP-LLSYGDGDTSNSTLDKKLREK

Query:  DIVLAVFCEHLLLAQQQMKQYPNRKRRNVEYQIGELVFLKIRPYRQLTLRRKRNEKFSPKYFGSYKILKKVGSVAYMLDLPVNTSIHPVFHVSQLKKFVG
        D++LA   EHL+LAQQQMKQY + KRR VEYQ+G+LVFLKIRP+RQLTLRRKRNEK SPKYFG YKI++++G+V Y LDLP NTSI+ +FHVSQLKK VG
Subjt:  DIVLAVFCEHLLLAQQQMKQYPNRKRRNVEYQIGELVFLKIRPYRQLTLRRKRNEKFSPKYFGSYKILKKVGSVAYMLDLPVNTSIHPVFHVSQLKKFVG

Query:  DHSNVQPTIQYVNENFEWKAQPEEIHRYQKNKAGSWKVPICWEGLPGHEASWESYDDMQRLYPNLHLEDKVNLE
        DH+ VQPTIQY+NEN EW+AQPE+I  Y+KNKA  W+V ICW+G P HEASWE YD++ +LYP+LHLEDK+ L+
Subjt:  DHSNVQPTIQYVNENFEWKAQPEEIHRYQKNKAGSWKVPICWEGLPGHEASWESYDDMQRLYPNLHLEDKVNLE

A0A5D3BJH1 Transposon Ty3-G Gag-Pol polyprotein2.7e-11366.67Show/hide
Query:  MFRMPDTTLNKSTAYHPQSDGQTEVENKGLERYLRCFCSEKPKEWVAWLPWPEFWYNTTFQRALGVTPFQVVYGWKPP-LLSYGDGDTSNSTLDKKLREK
        MFR+    LN+STAYHPQSDGQTEV N+GLE YL CFCSE+PKEWV+WLPW E+WYNTTF R+LG +PFQV+YG KPP LLSYG+G T+NSTL  +L+E+
Subjt:  MFRMPDTTLNKSTAYHPQSDGQTEVENKGLERYLRCFCSEKPKEWVAWLPWPEFWYNTTFQRALGVTPFQVVYGWKPP-LLSYGDGDTSNSTLDKKLREK

Query:  DIVLAVFCEHLLLAQQQMKQYPNRKRRNVEYQIGELVFLKIRPYRQLTLRRKRNEKFSPKYFGSYKILKKVGSVAYMLDLPVNTSIHPVFHVSQLKKFVG
          VLA   E LLL  QQMKQY ++KRR+VE+ +G+ V LKIRPYRQL+LR+KRN+K SPKYFG Y+I  KV +VAY LDLP +  IHPVFHVSQLK+FVG
Subjt:  DIVLAVFCEHLLLAQQQMKQYPNRKRRNVEYQIGELVFLKIRPYRQLTLRRKRNEKFSPKYFGSYKILKKVGSVAYMLDLPVNTSIHPVFHVSQLKKFVG

Query:  DHSNVQPTIQYVNENFEWKAQPEEIHRYQKNKAGSWKVPICWEGLPGHEASWESYDDMQRLYPNLHLEDKVNLERGSNVR-PPIRFHYSRRKKEKSH
        D + +QPT+Q+VNEN EW+AQPEE+ +YQKNKAG+W+V I W+ LP HEA WESYD++Q+ +P  HLEDKVNLE   NVR PPI+F Y R  K KSH
Subjt:  DHSNVQPTIQYVNENFEWKAQPEEIHRYQKNKAGSWKVPICWEGLPGHEASWESYDDMQRLYPNLHLEDKVNLERGSNVR-PPIRFHYSRRKKEKSH

A0A5D3E0E2 T32E20.305.6e-17297.3Show/hide
Query:  MFRMPDTTLNKSTAYHPQSDGQTEVENKGLERYLRCFCSEKPKEWVAWLPWPEFWYNTTFQRALGVTPFQVVYGWKPPLLSYGDGDTSNSTLDKKLREKD
        MFRMPDT LNKST YHPQSDGQTEVENKGLERYLRCFCSEKPKEWVAWLPWPEFWYNTTFQRALGVTPFQVVYGWKPPLLSYGDGDTSNSTLD+KLREKD
Subjt:  MFRMPDTTLNKSTAYHPQSDGQTEVENKGLERYLRCFCSEKPKEWVAWLPWPEFWYNTTFQRALGVTPFQVVYGWKPPLLSYGDGDTSNSTLDKKLREKD

Query:  IVLAVFCEHLLLAQQQMKQYPNRKRRNVEYQIGELVFLKIRPYRQLTLRRKRNEKFSPKYFGSYKILKKVGSVAYMLDLPVNTSIHPVFHVSQLKKFVGD
        IVLAVFCEHLLLAQQQMKQYP+RKRRNVEYQIGELVFLKIRPYRQLTLRRKRN+KFSPKYFGSYKI KKVGSVAYMLDLPVNTSIHPVFHVSQLKKFVGD
Subjt:  IVLAVFCEHLLLAQQQMKQYPNRKRRNVEYQIGELVFLKIRPYRQLTLRRKRNEKFSPKYFGSYKILKKVGSVAYMLDLPVNTSIHPVFHVSQLKKFVGD

Query:  HSNVQPTIQYVNENFEWKAQPEEIHRYQKNKAGSWKVPICWEGLPGHEASWESYDDMQRLYPNLHLEDKVNLERGSNVRPPIRFHYSRRKKEKSHV
        HSNVQPTIQYVNENFEWKAQPEEIHRYQKNKAGSWKVPICWEGLPGHEASWESY+DMQRLYPNLHLEDKVNLER SNVRPPIRFHYSRRKKEKSHV
Subjt:  HSNVQPTIQYVNENFEWKAQPEEIHRYQKNKAGSWKVPICWEGLPGHEASWESYDDMQRLYPNLHLEDKVNLERGSNVRPPIRFHYSRRKKEKSHV

SwissProt top hitse value%identityAlignment
P0CT34 Transposon Tf2-1 polyprotein4.3e-2034.39Show/hide
Query:  STAYHPQSDGQTEVENKGLERYLRCFCSEKPKEWVAWLPWPEFWYNTTFQRALGVTPFQVVYGWKPPLLSYGDGDTSNSTLDKKLREKDIVLAVFCEHLL
        S  Y PQ+DGQTE  N+ +E+ LRC CS  P  WV  +   +  YN     A  +TPF++V+ + P L        S+ T D+  +E   V     EHL 
Subjt:  STAYHPQSDGQTEVENKGLERYLRCFCSEKPKEWVAWLPWPEFWYNTTFQRALGVTPFQVVYGWKPPLLSYGDGDTSNSTLDKKLREKDIVLAVFCEHLL

Query:  LAQQQMKQYPNRKRRNV-EYQIGELVFLKIRPYRQLTLRRKRNEKFSPKYFGSYKILKKVGSVAYMLDLP--VNTSIHPVFHVSQLKKF
            +MK+Y + K + + E+Q G+LV +K    R  T    ++ K +P + G + +L+K G   Y LDLP  +       FHVS L+K+
Subjt:  LAQQQMKQYPNRKRRNV-EYQIGELVFLKIRPYRQLTLRRKRNEKFSPKYFGSYKILKKVGSVAYMLDLP--VNTSIHPVFHVSQLKKF

P0CT35 Transposon Tf2-2 polyprotein4.3e-2034.39Show/hide
Query:  STAYHPQSDGQTEVENKGLERYLRCFCSEKPKEWVAWLPWPEFWYNTTFQRALGVTPFQVVYGWKPPLLSYGDGDTSNSTLDKKLREKDIVLAVFCEHLL
        S  Y PQ+DGQTE  N+ +E+ LRC CS  P  WV  +   +  YN     A  +TPF++V+ + P L        S+ T D+  +E   V     EHL 
Subjt:  STAYHPQSDGQTEVENKGLERYLRCFCSEKPKEWVAWLPWPEFWYNTTFQRALGVTPFQVVYGWKPPLLSYGDGDTSNSTLDKKLREKDIVLAVFCEHLL

Query:  LAQQQMKQYPNRKRRNV-EYQIGELVFLKIRPYRQLTLRRKRNEKFSPKYFGSYKILKKVGSVAYMLDLP--VNTSIHPVFHVSQLKKF
            +MK+Y + K + + E+Q G+LV +K    R  T    ++ K +P + G + +L+K G   Y LDLP  +       FHVS L+K+
Subjt:  LAQQQMKQYPNRKRRNV-EYQIGELVFLKIRPYRQLTLRRKRNEKFSPKYFGSYKILKKVGSVAYMLDLP--VNTSIHPVFHVSQLKKF

P0CT36 Transposon Tf2-3 polyprotein4.3e-2034.39Show/hide
Query:  STAYHPQSDGQTEVENKGLERYLRCFCSEKPKEWVAWLPWPEFWYNTTFQRALGVTPFQVVYGWKPPLLSYGDGDTSNSTLDKKLREKDIVLAVFCEHLL
        S  Y PQ+DGQTE  N+ +E+ LRC CS  P  WV  +   +  YN     A  +TPF++V+ + P L        S+ T D+  +E   V     EHL 
Subjt:  STAYHPQSDGQTEVENKGLERYLRCFCSEKPKEWVAWLPWPEFWYNTTFQRALGVTPFQVVYGWKPPLLSYGDGDTSNSTLDKKLREKDIVLAVFCEHLL

Query:  LAQQQMKQYPNRKRRNV-EYQIGELVFLKIRPYRQLTLRRKRNEKFSPKYFGSYKILKKVGSVAYMLDLP--VNTSIHPVFHVSQLKKF
            +MK+Y + K + + E+Q G+LV +K    R  T    ++ K +P + G + +L+K G   Y LDLP  +       FHVS L+K+
Subjt:  LAQQQMKQYPNRKRRNV-EYQIGELVFLKIRPYRQLTLRRKRNEKFSPKYFGSYKILKKVGSVAYMLDLP--VNTSIHPVFHVSQLKKF

P0CT41 Transposon Tf2-12 polyprotein4.3e-2034.39Show/hide
Query:  STAYHPQSDGQTEVENKGLERYLRCFCSEKPKEWVAWLPWPEFWYNTTFQRALGVTPFQVVYGWKPPLLSYGDGDTSNSTLDKKLREKDIVLAVFCEHLL
        S  Y PQ+DGQTE  N+ +E+ LRC CS  P  WV  +   +  YN     A  +TPF++V+ + P L        S+ T D+  +E   V     EHL 
Subjt:  STAYHPQSDGQTEVENKGLERYLRCFCSEKPKEWVAWLPWPEFWYNTTFQRALGVTPFQVVYGWKPPLLSYGDGDTSNSTLDKKLREKDIVLAVFCEHLL

Query:  LAQQQMKQYPNRKRRNV-EYQIGELVFLKIRPYRQLTLRRKRNEKFSPKYFGSYKILKKVGSVAYMLDLP--VNTSIHPVFHVSQLKKF
            +MK+Y + K + + E+Q G+LV +K    R  T    ++ K +P + G + +L+K G   Y LDLP  +       FHVS L+K+
Subjt:  LAQQQMKQYPNRKRRNV-EYQIGELVFLKIRPYRQLTLRRKRNEKFSPKYFGSYKILKKVGSVAYMLDLP--VNTSIHPVFHVSQLKKF

Q9UR07 Transposon Tf2-11 polyprotein4.3e-2034.39Show/hide
Query:  STAYHPQSDGQTEVENKGLERYLRCFCSEKPKEWVAWLPWPEFWYNTTFQRALGVTPFQVVYGWKPPLLSYGDGDTSNSTLDKKLREKDIVLAVFCEHLL
        S  Y PQ+DGQTE  N+ +E+ LRC CS  P  WV  +   +  YN     A  +TPF++V+ + P L        S+ T D+  +E   V     EHL 
Subjt:  STAYHPQSDGQTEVENKGLERYLRCFCSEKPKEWVAWLPWPEFWYNTTFQRALGVTPFQVVYGWKPPLLSYGDGDTSNSTLDKKLREKDIVLAVFCEHLL

Query:  LAQQQMKQYPNRKRRNV-EYQIGELVFLKIRPYRQLTLRRKRNEKFSPKYFGSYKILKKVGSVAYMLDLP--VNTSIHPVFHVSQLKKF
            +MK+Y + K + + E+Q G+LV +K    R  T    ++ K +P + G + +L+K G   Y LDLP  +       FHVS L+K+
Subjt:  LAQQQMKQYPNRKRRNV-EYQIGELVFLKIRPYRQLTLRRKRNEKFSPKYFGSYKILKKVGSVAYMLDLP--VNTSIHPVFHVSQLKKF

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCAGAATGCCCGATACTACATTGAATAAAAGCACTGCCTATCATCCTCAGTCCGATGGCCAAACTGAAGTGGAGAATAAAGGGCTGGAGAGGTATCTTAGATGTTT
CTGCAGTGAAAAGCCTAAAGAATGGGTTGCTTGGTTACCATGGCCTGAATTTTGGTATAATACCACATTTCAAAGAGCCTTGGGTGTAACCCCTTTTCAAGTGGTGTATG
GGTGGAAACCTCCTCTATTATCATATGGTGATGGTGATACTTCTAACTCTACGTTGGACAAAAAGTTGAGGGAAAAGGATATTGTTTTGGCAGTTTTTTGTGAACATCTT
CTTTTGGCCCAACAGCAAATGAAACAATATCCAAACCGCAAGAGAAGGAATGTAGAATATCAGATTGGAGAGTTAGTTTTCTTGAAGATCAGGCCCTATAGACAGTTGAC
ATTAAGGAGAAAAAGGAATGAGAAGTTTTCTCCAAAATATTTTGGGTCTTATAAGATCTTAAAGAAAGTTGGTTCGGTGGCTTATATGTTGGATCTACCAGTAAATACTT
CCATCCATCCTGTTTTCCATGTCTCACAGCTGAAGAAATTTGTGGGAGATCATTCGAATGTGCAACCCACTATACAGTATGTAAATGAGAATTTTGAATGGAAGGCTCAA
CCTGAAGAAATCCACAGGTATCAGAAGAACAAAGCTGGAAGTTGGAAAGTTCCGATTTGCTGGGAAGGGCTACCGGGGCATGAAGCTTCCTGGGAGAGCTATGATGATAT
GCAACGGCTTTACCCTAATCTTCACCTTGAGGACAAGGTGAATTTAGAAAGGGGGAGTAATGTTAGACCTCCTATTAGATTTCATTACAGTAGGAGGAAAAAGGAGAAAT
CCCATGTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTCAGAATGCCCGATACTACATTGAATAAAAGCACTGCCTATCATCCTCAGTCCGATGGCCAAACTGAAGTGGAGAATAAAGGGCTGGAGAGGTATCTTAGATGTTT
CTGCAGTGAAAAGCCTAAAGAATGGGTTGCTTGGTTACCATGGCCTGAATTTTGGTATAATACCACATTTCAAAGAGCCTTGGGTGTAACCCCTTTTCAAGTGGTGTATG
GGTGGAAACCTCCTCTATTATCATATGGTGATGGTGATACTTCTAACTCTACGTTGGACAAAAAGTTGAGGGAAAAGGATATTGTTTTGGCAGTTTTTTGTGAACATCTT
CTTTTGGCCCAACAGCAAATGAAACAATATCCAAACCGCAAGAGAAGGAATGTAGAATATCAGATTGGAGAGTTAGTTTTCTTGAAGATCAGGCCCTATAGACAGTTGAC
ATTAAGGAGAAAAAGGAATGAGAAGTTTTCTCCAAAATATTTTGGGTCTTATAAGATCTTAAAGAAAGTTGGTTCGGTGGCTTATATGTTGGATCTACCAGTAAATACTT
CCATCCATCCTGTTTTCCATGTCTCACAGCTGAAGAAATTTGTGGGAGATCATTCGAATGTGCAACCCACTATACAGTATGTAAATGAGAATTTTGAATGGAAGGCTCAA
CCTGAAGAAATCCACAGGTATCAGAAGAACAAAGCTGGAAGTTGGAAAGTTCCGATTTGCTGGGAAGGGCTACCGGGGCATGAAGCTTCCTGGGAGAGCTATGATGATAT
GCAACGGCTTTACCCTAATCTTCACCTTGAGGACAAGGTGAATTTAGAAAGGGGGAGTAATGTTAGACCTCCTATTAGATTTCATTACAGTAGGAGGAAAAAGGAGAAAT
CCCATGTGTAA
Protein sequenceShow/hide protein sequence
MFRMPDTTLNKSTAYHPQSDGQTEVENKGLERYLRCFCSEKPKEWVAWLPWPEFWYNTTFQRALGVTPFQVVYGWKPPLLSYGDGDTSNSTLDKKLREKDIVLAVFCEHL
LLAQQQMKQYPNRKRRNVEYQIGELVFLKIRPYRQLTLRRKRNEKFSPKYFGSYKILKKVGSVAYMLDLPVNTSIHPVFHVSQLKKFVGDHSNVQPTIQYVNENFEWKAQ
PEEIHRYQKNKAGSWKVPICWEGLPGHEASWESYDDMQRLYPNLHLEDKVNLERGSNVRPPIRFHYSRRKKEKSHV