| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0047979.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 3.2e-173 | 77.48 | Show/hide |
Query: MDVKSAFLNGYLEEEVYLEQPPGYCVKGQEYKVLKLKKTLYGLKQAPRIWNSKINKYFLDNGYLRCPYEHSLYIKVNGHGDIL-----------------
MDVKSAFLNGYL EEVYLEQPPGY VKGQE KVLKLKK LYGLKQAPR+WNS+INKYFLDNGYLRCPYEHSLYIKVNGHGDIL
Subjt: MDVKSAFLNGYLEEEVYLEQPPGYCVKGQEYKVLKLKKTLYGLKQAPRIWNSKINKYFLDNGYLRCPYEHSLYIKVNGHGDIL-----------------
Query: ---------------------------------------------------------PVATPIETGTKLSKHEEGDDVDPSYFKSLVESLRYLTCTRPYI
PVATPIETGTKLSKHEEGDDVDPSYFKSLV SLRYLTCTRP I
Subjt: ---------------------------------------------------------PVATPIETGTKLSKHEEGDDVDPSYFKSLVESLRYLTCTRPYI
Query: LFSVGLVSRFMESPTTTHLKVAKRILRYLRGTLDYGLLYSSSKEFKLEGYCDSDWAGDTNDRKSTSGYVFFIGNTAFTWSSKKQPIVTLSTCEAEYVAAA
LFSVGLVSRFMESPTTTHLKVAKRILRYLRGTLDYGL YSSSKEFKLEGYCDSDWAGDTNDRKSTSGYVFFIGNTAFTWSSKKQPIVTLSTCEAEYVA A
Subjt: LFSVGLVSRFMESPTTTHLKVAKRILRYLRGTLDYGLLYSSSKEFKLEGYCDSDWAGDTNDRKSTSGYVFFIGNTAFTWSSKKQPIVTLSTCEAEYVAAA
Query: SCVCHAVWLRNLLKKVGILQDNPTVIHVDNKSTIALAKNPVFHDRSKQIDTRFHFIRDCISRKEVQVEYVKTQDQIADIFTKPLKVNVFNNLRTLLGVFQ
SCVCHAVWLRNLLK V ILQ++PTVIH+DNKSTIALAKNPVFHDRSK IDTRFHFIRDCISRKEVQVEYVKT+DQIADIFTKPLKVNVFNNLRTLLGVFQ
Subjt: SCVCHAVWLRNLLKKVGILQDNPTVIHVDNKSTIALAKNPVFHDRSKQIDTRFHFIRDCISRKEVQVEYVKTQDQIADIFTKPLKVNVFNNLRTLLGVFQ
Query: KKKKTCLREDVEN
KKTCLREDVEN
Subjt: KKKKTCLREDVEN
|
|
| KAA0051914.1 putative copia-type polyprotein [Cucumis melo var. makuwa] | 2.2e-174 | 77.48 | Show/hide |
Query: MDVKSAFLNGYLEEEVYLEQPPGYCVKGQEYKVLKLKKTLYGLKQAPRIWNSKINKYFLDNGYLRCPYEHSLYIKVNGHGDIL-----------------
MDVKSAFLNGYLEEEVYLEQPPGY VKGQEYKVLKLKKTLYGLKQAPR+WNS+INKYFLDNGYLRCPYEHSLYIKVNGHGDIL
Subjt: MDVKSAFLNGYLEEEVYLEQPPGYCVKGQEYKVLKLKKTLYGLKQAPRIWNSKINKYFLDNGYLRCPYEHSLYIKVNGHGDIL-----------------
Query: ---------------------------------------------------------PVATPIETGTKLSKHEEGDDVDPSYFKSLVESLRYLTCTRPYI
P+AT IETGTKLSKHEEGDDVDPSYFKSLV SLRYLTCTRPYI
Subjt: ---------------------------------------------------------PVATPIETGTKLSKHEEGDDVDPSYFKSLVESLRYLTCTRPYI
Query: LFSVGLVSRFMESPTTTHLKVAKRILRYLRGTLDYGLLYSSSKEFKLEGYCDSDWAGDTNDRKSTSGYVFFIGNTAFTWSSKKQPIVTLSTCEAEYVAAA
LFSVGLVSRF+ESPTTTHLKV KRILRYL+GTLDYGL YSSSKEFKLEGYCDSDWAGDTNDRKSTSGYVFFIGNTAFTWS KKQPIVTLSTCEAEYVAAA
Subjt: LFSVGLVSRFMESPTTTHLKVAKRILRYLRGTLDYGLLYSSSKEFKLEGYCDSDWAGDTNDRKSTSGYVFFIGNTAFTWSSKKQPIVTLSTCEAEYVAAA
Query: SCVCHAVWLRNLLKKVGILQDNPTVIHVDNKSTIALAKNPVFHDRSKQIDTRFHFIRDCISRKEVQVEYVKTQDQIADIFTKPLKVNVFNNLRTLLGVFQ
SCVCHAVWLRNLLK VGILQD+PTVIHVDNKSTIALAKNPVFHDRSK+IDTRFHFIRDCISRKEVQVEYV T+DQIADIFTKPLKVNVFNNLRTLLGVF
Subjt: SCVCHAVWLRNLLKKVGILQDNPTVIHVDNKSTIALAKNPVFHDRSKQIDTRFHFIRDCISRKEVQVEYVKTQDQIADIFTKPLKVNVFNNLRTLLGVFQ
Query: KKKKTCLREDVEN
KKTCLREDVEN
Subjt: KKKKTCLREDVEN
|
|
| KAA0056496.1 putative mitochondrial protein [Cucumis melo var. makuwa] | 1.6e-188 | 97.35 | Show/hide |
Query: MDVKSAFLNGYLEEEVYLEQPPGYCVKGQEYKVLKLKKTLYGLKQAPRIWNSKINKYFLDNGYLRCPYEHSLYIKVNGHGDILPVATPIETGTKLSKHEE
MDVKSAFLNGYLEEEVYLEQPPGYCVKGQEYKVLKLKKTLYGLKQAPRIWNSKINKYFLDNGYLRCPYEHSLYIK PVATPIETGTKLSKHEE
Subjt: MDVKSAFLNGYLEEEVYLEQPPGYCVKGQEYKVLKLKKTLYGLKQAPRIWNSKINKYFLDNGYLRCPYEHSLYIKVNGHGDILPVATPIETGTKLSKHEE
Query: GDDVDPSYFKSLVESLRYLTCTRPYILFSVGLVSRFMESPTTTHLKVAKRILRYLRGTLDYGLLYSSSKEFKLEGYCDSDWAGDTNDRKSTSGYVFFIGN
GDDVDPSYFKSLVESLRYLTCTRPYILFSVGLVSRFMESPTTTHLKVAKRILRYLRGTLDYGLLYSSSKEFKLEGYCDSDWAGDTNDRKSTSGYVFFIGN
Subjt: GDDVDPSYFKSLVESLRYLTCTRPYILFSVGLVSRFMESPTTTHLKVAKRILRYLRGTLDYGLLYSSSKEFKLEGYCDSDWAGDTNDRKSTSGYVFFIGN
Query: TAFTWSSKKQPIVTLSTCEAEYVAAASCVCHAVWLRNLLKKVGILQDNPTVIHVDNKSTIALAKNPVFHDRSKQIDTRFHFIRDCISRKEVQVEYVKTQD
TAFTWSSKKQPIVTLSTCEAEYVAAASCVCHAVWLRNLLKKVGILQDNPTVIHVDNKSTIALAKNPVFHDRSKQIDTRFHFIRDCISRKEVQVEYVKTQD
Subjt: TAFTWSSKKQPIVTLSTCEAEYVAAASCVCHAVWLRNLLKKVGILQDNPTVIHVDNKSTIALAKNPVFHDRSKQIDTRFHFIRDCISRKEVQVEYVKTQD
Query: QIADIFTKPLKVNVFNNLRTLLGVFQKKKKTCLREDVEN
QIADIFTKPLKVNVFNNLRTLLGVFQ KKKTCLREDVEN
Subjt: QIADIFTKPLKVNVFNNLRTLLGVFQKKKKTCLREDVEN
|
|
| TYK12247.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 1.7e-174 | 77.97 | Show/hide |
Query: MDVKSAFLNGYLEEEVYLEQPPGYCVKGQEYKVLKLKKTLYGLKQAPRIWNSKINKYFLDNGYLRCPYEHSLYIKVNGHGDIL-----------------
MDVKSAFLNGYLEEEVYLEQPPGY VKGQE KVLKLKK LYGLKQAPR+WNS+INKYFLDNGYLRCPYEHSLYIKVNGHGDIL
Subjt: MDVKSAFLNGYLEEEVYLEQPPGYCVKGQEYKVLKLKKTLYGLKQAPRIWNSKINKYFLDNGYLRCPYEHSLYIKVNGHGDIL-----------------
Query: ---------------------------------------------------------PVATPIETGTKLSKHEEGDDVDPSYFKSLVESLRYLTCTRPYI
PVATPIETGTKLSKHEEGDDVDPSYFKSLV SLRYLTCTRP I
Subjt: ---------------------------------------------------------PVATPIETGTKLSKHEEGDDVDPSYFKSLVESLRYLTCTRPYI
Query: LFSVGLVSRFMESPTTTHLKVAKRILRYLRGTLDYGLLYSSSKEFKLEGYCDSDWAGDTNDRKSTSGYVFFIGNTAFTWSSKKQPIVTLSTCEAEYVAAA
LFSVGLVSRFMESPTTTHLKVAKRILRYLRGTLDYGL YSSSKEFKLEGYCDSDWAGDTNDRKSTSGYVFFIGNTAFTWSSKKQPIVTLSTCEAEYVAAA
Subjt: LFSVGLVSRFMESPTTTHLKVAKRILRYLRGTLDYGLLYSSSKEFKLEGYCDSDWAGDTNDRKSTSGYVFFIGNTAFTWSSKKQPIVTLSTCEAEYVAAA
Query: SCVCHAVWLRNLLKKVGILQDNPTVIHVDNKSTIALAKNPVFHDRSKQIDTRFHFIRDCISRKEVQVEYVKTQDQIADIFTKPLKVNVFNNLRTLLGVFQ
SCVCHAVWLRNLLK VGILQ++PTVIH+DNKSTIALAKNPVFHDRSK IDTRFHFIRDCISRKEVQVEYVKT+DQIADIFTKPLKVNVFNNLRTLLGVF
Subjt: SCVCHAVWLRNLLKKVGILQDNPTVIHVDNKSTIALAKNPVFHDRSKQIDTRFHFIRDCISRKEVQVEYVKTQDQIADIFTKPLKVNVFNNLRTLLGVFQ
Query: KKKKTCLREDVEN
KKTCLREDVEN
Subjt: KKKKTCLREDVEN
|
|
| TYK21979.1 putative copia-type polyprotein [Cucumis melo var. makuwa] | 2.4e-173 | 77.72 | Show/hide |
Query: MDVKSAFLNGYLEEEVYLEQPPGYCVKGQEYKVLKLKKTLYGLKQAPRIWNSKINKYFLDNGYLRCPYEHSLYIKVNGHGDIL-----------------
MDVKSAFLNGYLEEEVYLEQPPGY VKGQE KVLKLKK LYGLKQAPR+WNS+INKYFLDNGYLRCPYEHSLYIKVNGHGDIL
Subjt: MDVKSAFLNGYLEEEVYLEQPPGYCVKGQEYKVLKLKKTLYGLKQAPRIWNSKINKYFLDNGYLRCPYEHSLYIKVNGHGDIL-----------------
Query: ---------------------------------------------------------PVATPIETGTKLSKHEEGDDVDPSYFKSLVESLRYLTCTRPYI
PVATPIETGTKLSKHE+GDDVDPSYFKSLV SLRYLTCTRP I
Subjt: ---------------------------------------------------------PVATPIETGTKLSKHEEGDDVDPSYFKSLVESLRYLTCTRPYI
Query: LFSVGLVSRFMESPTTTHLKVAKRILRYLRGTLDYGLLYSSSKEFKLEGYCDSDWAGDTNDRKSTSGYVFFIGNTAFTWSSKKQPIVTLSTCEAEYVAAA
LFSVGLVSRFMESPTTTHLKVAKRILRYLRGTLDYGL YSSSKEFKLEGYCDSDWAGDTN RKSTSGYVFFIGNTAFTWSSKKQPIVTLSTCEAEYVAAA
Subjt: LFSVGLVSRFMESPTTTHLKVAKRILRYLRGTLDYGLLYSSSKEFKLEGYCDSDWAGDTNDRKSTSGYVFFIGNTAFTWSSKKQPIVTLSTCEAEYVAAA
Query: SCVCHAVWLRNLLKKVGILQDNPTVIHVDNKSTIALAKNPVFHDRSKQIDTRFHFIRDCISRKEVQVEYVKTQDQIADIFTKPLKVNVFNNLRTLLGVFQ
SCVCHAVWLRNLLK VGILQ++PTVIHVDNKSTIALAKNPVFHDRSK IDTRFHFIRDCISRKEVQVEYVKT+DQIADI TKPLKVNVFNNLRTLLGVFQ
Subjt: SCVCHAVWLRNLLKKVGILQDNPTVIHVDNKSTIALAKNPVFHDRSKQIDTRFHFIRDCISRKEVQVEYVKTQDQIADIFTKPLKVNVFNNLRTLLGVFQ
Query: KKKKTCLREDVEN
KKTCLREDVEN
Subjt: KKKKTCLREDVEN
|
|
| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7U3F3 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.5e-173 | 77.48 | Show/hide |
Query: MDVKSAFLNGYLEEEVYLEQPPGYCVKGQEYKVLKLKKTLYGLKQAPRIWNSKINKYFLDNGYLRCPYEHSLYIKVNGHGDIL-----------------
MDVKSAFLNGYL EEVYLEQPPGY VKGQE KVLKLKK LYGLKQAPR+WNS+INKYFLDNGYLRCPYEHSLYIKVNGHGDIL
Subjt: MDVKSAFLNGYLEEEVYLEQPPGYCVKGQEYKVLKLKKTLYGLKQAPRIWNSKINKYFLDNGYLRCPYEHSLYIKVNGHGDIL-----------------
Query: ---------------------------------------------------------PVATPIETGTKLSKHEEGDDVDPSYFKSLVESLRYLTCTRPYI
PVATPIETGTKLSKHEEGDDVDPSYFKSLV SLRYLTCTRP I
Subjt: ---------------------------------------------------------PVATPIETGTKLSKHEEGDDVDPSYFKSLVESLRYLTCTRPYI
Query: LFSVGLVSRFMESPTTTHLKVAKRILRYLRGTLDYGLLYSSSKEFKLEGYCDSDWAGDTNDRKSTSGYVFFIGNTAFTWSSKKQPIVTLSTCEAEYVAAA
LFSVGLVSRFMESPTTTHLKVAKRILRYLRGTLDYGL YSSSKEFKLEGYCDSDWAGDTNDRKSTSGYVFFIGNTAFTWSSKKQPIVTLSTCEAEYVA A
Subjt: LFSVGLVSRFMESPTTTHLKVAKRILRYLRGTLDYGLLYSSSKEFKLEGYCDSDWAGDTNDRKSTSGYVFFIGNTAFTWSSKKQPIVTLSTCEAEYVAAA
Query: SCVCHAVWLRNLLKKVGILQDNPTVIHVDNKSTIALAKNPVFHDRSKQIDTRFHFIRDCISRKEVQVEYVKTQDQIADIFTKPLKVNVFNNLRTLLGVFQ
SCVCHAVWLRNLLK V ILQ++PTVIH+DNKSTIALAKNPVFHDRSK IDTRFHFIRDCISRKEVQVEYVKT+DQIADIFTKPLKVNVFNNLRTLLGVFQ
Subjt: SCVCHAVWLRNLLKKVGILQDNPTVIHVDNKSTIALAKNPVFHDRSKQIDTRFHFIRDCISRKEVQVEYVKTQDQIADIFTKPLKVNVFNNLRTLLGVFQ
Query: KKKKTCLREDVEN
KKTCLREDVEN
Subjt: KKKKTCLREDVEN
|
|
| A0A5A7U996 Putative copia-type polyprotein | 1.1e-174 | 77.48 | Show/hide |
Query: MDVKSAFLNGYLEEEVYLEQPPGYCVKGQEYKVLKLKKTLYGLKQAPRIWNSKINKYFLDNGYLRCPYEHSLYIKVNGHGDIL-----------------
MDVKSAFLNGYLEEEVYLEQPPGY VKGQEYKVLKLKKTLYGLKQAPR+WNS+INKYFLDNGYLRCPYEHSLYIKVNGHGDIL
Subjt: MDVKSAFLNGYLEEEVYLEQPPGYCVKGQEYKVLKLKKTLYGLKQAPRIWNSKINKYFLDNGYLRCPYEHSLYIKVNGHGDIL-----------------
Query: ---------------------------------------------------------PVATPIETGTKLSKHEEGDDVDPSYFKSLVESLRYLTCTRPYI
P+AT IETGTKLSKHEEGDDVDPSYFKSLV SLRYLTCTRPYI
Subjt: ---------------------------------------------------------PVATPIETGTKLSKHEEGDDVDPSYFKSLVESLRYLTCTRPYI
Query: LFSVGLVSRFMESPTTTHLKVAKRILRYLRGTLDYGLLYSSSKEFKLEGYCDSDWAGDTNDRKSTSGYVFFIGNTAFTWSSKKQPIVTLSTCEAEYVAAA
LFSVGLVSRF+ESPTTTHLKV KRILRYL+GTLDYGL YSSSKEFKLEGYCDSDWAGDTNDRKSTSGYVFFIGNTAFTWS KKQPIVTLSTCEAEYVAAA
Subjt: LFSVGLVSRFMESPTTTHLKVAKRILRYLRGTLDYGLLYSSSKEFKLEGYCDSDWAGDTNDRKSTSGYVFFIGNTAFTWSSKKQPIVTLSTCEAEYVAAA
Query: SCVCHAVWLRNLLKKVGILQDNPTVIHVDNKSTIALAKNPVFHDRSKQIDTRFHFIRDCISRKEVQVEYVKTQDQIADIFTKPLKVNVFNNLRTLLGVFQ
SCVCHAVWLRNLLK VGILQD+PTVIHVDNKSTIALAKNPVFHDRSK+IDTRFHFIRDCISRKEVQVEYV T+DQIADIFTKPLKVNVFNNLRTLLGVF
Subjt: SCVCHAVWLRNLLKKVGILQDNPTVIHVDNKSTIALAKNPVFHDRSKQIDTRFHFIRDCISRKEVQVEYVKTQDQIADIFTKPLKVNVFNNLRTLLGVFQ
Query: KKKKTCLREDVEN
KKTCLREDVEN
Subjt: KKKKTCLREDVEN
|
|
| A0A5A7UQB9 Putative mitochondrial protein | 7.6e-189 | 97.35 | Show/hide |
Query: MDVKSAFLNGYLEEEVYLEQPPGYCVKGQEYKVLKLKKTLYGLKQAPRIWNSKINKYFLDNGYLRCPYEHSLYIKVNGHGDILPVATPIETGTKLSKHEE
MDVKSAFLNGYLEEEVYLEQPPGYCVKGQEYKVLKLKKTLYGLKQAPRIWNSKINKYFLDNGYLRCPYEHSLYIK PVATPIETGTKLSKHEE
Subjt: MDVKSAFLNGYLEEEVYLEQPPGYCVKGQEYKVLKLKKTLYGLKQAPRIWNSKINKYFLDNGYLRCPYEHSLYIKVNGHGDILPVATPIETGTKLSKHEE
Query: GDDVDPSYFKSLVESLRYLTCTRPYILFSVGLVSRFMESPTTTHLKVAKRILRYLRGTLDYGLLYSSSKEFKLEGYCDSDWAGDTNDRKSTSGYVFFIGN
GDDVDPSYFKSLVESLRYLTCTRPYILFSVGLVSRFMESPTTTHLKVAKRILRYLRGTLDYGLLYSSSKEFKLEGYCDSDWAGDTNDRKSTSGYVFFIGN
Subjt: GDDVDPSYFKSLVESLRYLTCTRPYILFSVGLVSRFMESPTTTHLKVAKRILRYLRGTLDYGLLYSSSKEFKLEGYCDSDWAGDTNDRKSTSGYVFFIGN
Query: TAFTWSSKKQPIVTLSTCEAEYVAAASCVCHAVWLRNLLKKVGILQDNPTVIHVDNKSTIALAKNPVFHDRSKQIDTRFHFIRDCISRKEVQVEYVKTQD
TAFTWSSKKQPIVTLSTCEAEYVAAASCVCHAVWLRNLLKKVGILQDNPTVIHVDNKSTIALAKNPVFHDRSKQIDTRFHFIRDCISRKEVQVEYVKTQD
Subjt: TAFTWSSKKQPIVTLSTCEAEYVAAASCVCHAVWLRNLLKKVGILQDNPTVIHVDNKSTIALAKNPVFHDRSKQIDTRFHFIRDCISRKEVQVEYVKTQD
Query: QIADIFTKPLKVNVFNNLRTLLGVFQKKKKTCLREDVEN
QIADIFTKPLKVNVFNNLRTLLGVFQ KKKTCLREDVEN
Subjt: QIADIFTKPLKVNVFNNLRTLLGVFQKKKKTCLREDVEN
|
|
| A0A5D3CJX7 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 8.1e-175 | 77.97 | Show/hide |
Query: MDVKSAFLNGYLEEEVYLEQPPGYCVKGQEYKVLKLKKTLYGLKQAPRIWNSKINKYFLDNGYLRCPYEHSLYIKVNGHGDIL-----------------
MDVKSAFLNGYLEEEVYLEQPPGY VKGQE KVLKLKK LYGLKQAPR+WNS+INKYFLDNGYLRCPYEHSLYIKVNGHGDIL
Subjt: MDVKSAFLNGYLEEEVYLEQPPGYCVKGQEYKVLKLKKTLYGLKQAPRIWNSKINKYFLDNGYLRCPYEHSLYIKVNGHGDIL-----------------
Query: ---------------------------------------------------------PVATPIETGTKLSKHEEGDDVDPSYFKSLVESLRYLTCTRPYI
PVATPIETGTKLSKHEEGDDVDPSYFKSLV SLRYLTCTRP I
Subjt: ---------------------------------------------------------PVATPIETGTKLSKHEEGDDVDPSYFKSLVESLRYLTCTRPYI
Query: LFSVGLVSRFMESPTTTHLKVAKRILRYLRGTLDYGLLYSSSKEFKLEGYCDSDWAGDTNDRKSTSGYVFFIGNTAFTWSSKKQPIVTLSTCEAEYVAAA
LFSVGLVSRFMESPTTTHLKVAKRILRYLRGTLDYGL YSSSKEFKLEGYCDSDWAGDTNDRKSTSGYVFFIGNTAFTWSSKKQPIVTLSTCEAEYVAAA
Subjt: LFSVGLVSRFMESPTTTHLKVAKRILRYLRGTLDYGLLYSSSKEFKLEGYCDSDWAGDTNDRKSTSGYVFFIGNTAFTWSSKKQPIVTLSTCEAEYVAAA
Query: SCVCHAVWLRNLLKKVGILQDNPTVIHVDNKSTIALAKNPVFHDRSKQIDTRFHFIRDCISRKEVQVEYVKTQDQIADIFTKPLKVNVFNNLRTLLGVFQ
SCVCHAVWLRNLLK VGILQ++PTVIH+DNKSTIALAKNPVFHDRSK IDTRFHFIRDCISRKEVQVEYVKT+DQIADIFTKPLKVNVFNNLRTLLGVF
Subjt: SCVCHAVWLRNLLKKVGILQDNPTVIHVDNKSTIALAKNPVFHDRSKQIDTRFHFIRDCISRKEVQVEYVKTQDQIADIFTKPLKVNVFNNLRTLLGVFQ
Query: KKKKTCLREDVEN
KKTCLREDVEN
Subjt: KKKKTCLREDVEN
|
|
| A0A5D3DF53 Putative copia-type polyprotein | 1.2e-173 | 77.72 | Show/hide |
Query: MDVKSAFLNGYLEEEVYLEQPPGYCVKGQEYKVLKLKKTLYGLKQAPRIWNSKINKYFLDNGYLRCPYEHSLYIKVNGHGDIL-----------------
MDVKSAFLNGYLEEEVYLEQPPGY VKGQE KVLKLKK LYGLKQAPR+WNS+INKYFLDNGYLRCPYEHSLYIKVNGHGDIL
Subjt: MDVKSAFLNGYLEEEVYLEQPPGYCVKGQEYKVLKLKKTLYGLKQAPRIWNSKINKYFLDNGYLRCPYEHSLYIKVNGHGDIL-----------------
Query: ---------------------------------------------------------PVATPIETGTKLSKHEEGDDVDPSYFKSLVESLRYLTCTRPYI
PVATPIETGTKLSKHE+GDDVDPSYFKSLV SLRYLTCTRP I
Subjt: ---------------------------------------------------------PVATPIETGTKLSKHEEGDDVDPSYFKSLVESLRYLTCTRPYI
Query: LFSVGLVSRFMESPTTTHLKVAKRILRYLRGTLDYGLLYSSSKEFKLEGYCDSDWAGDTNDRKSTSGYVFFIGNTAFTWSSKKQPIVTLSTCEAEYVAAA
LFSVGLVSRFMESPTTTHLKVAKRILRYLRGTLDYGL YSSSKEFKLEGYCDSDWAGDTN RKSTSGYVFFIGNTAFTWSSKKQPIVTLSTCEAEYVAAA
Subjt: LFSVGLVSRFMESPTTTHLKVAKRILRYLRGTLDYGLLYSSSKEFKLEGYCDSDWAGDTNDRKSTSGYVFFIGNTAFTWSSKKQPIVTLSTCEAEYVAAA
Query: SCVCHAVWLRNLLKKVGILQDNPTVIHVDNKSTIALAKNPVFHDRSKQIDTRFHFIRDCISRKEVQVEYVKTQDQIADIFTKPLKVNVFNNLRTLLGVFQ
SCVCHAVWLRNLLK VGILQ++PTVIHVDNKSTIALAKNPVFHDRSK IDTRFHFIRDCISRKEVQVEYVKT+DQIADI TKPLKVNVFNNLRTLLGVFQ
Subjt: SCVCHAVWLRNLLKKVGILQDNPTVIHVDNKSTIALAKNPVFHDRSKQIDTRFHFIRDCISRKEVQVEYVKTQDQIADIFTKPLKVNVFNNLRTLLGVFQ
Query: KKKKTCLREDVEN
KKTCLREDVEN
Subjt: KKKKTCLREDVEN
|
|
| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 1.7e-49 | 32.84 | Show/hide |
Query: MDVKSAFLNGYLEEEVYLEQPPGYCVKGQEYKVLKLKKTLYGLKQAPRIW--------------NSKINK--YFLDNG----------------------
MDVK+AFLNG L+EE+Y+ P G + V KL K +YGLKQA R W NS +++ Y LD G
Subjt: MDVKSAFLNGYLEEEVYLEQPPGYCVKGQEYKVLKLKKTLYGLKQAPRIW--------------NSKINK--YFLDNG----------------------
Query: --------YLRCPY--------EHSLYIKVNGHGDIL---------------------PVATPIETGTKLSKHEEGDDVDPSYFKSLVESLRY-LTCTRP
YL + +H + I++ D + V+TP+ + +D + + +SL+ L Y + CTRP
Subjt: --------YLRCPY--------EHSLYIKVNGHGDIL---------------------PVATPIETGTKLSKHEEGDDVDPSYFKSLVESLRY-LTCTRP
Query: YILFSVGLVSRFMESPTTTHLKVAKRILRYLRGTLDYGLLYSSSKEF--KLEGYCDSDWAGDTNDRKSTSGYVF-FIGNTAFTWSSKKQPIVTLSTCEAE
+ +V ++SR+ + + KR+LRYL+GT+D L++ + F K+ GY DSDWAG DRKST+GY+F W++K+Q V S+ EAE
Subjt: YILFSVGLVSRFMESPTTTHLKVAKRILRYLRGTLDYGLLYSSSKEF--KLEGYCDSDWAGDTNDRKSTSGYVF-FIGNTAFTWSSKKQPIVTLSTCEAE
Query: YVAAASCVCHAVWLRNLLKKVGILQDNPTVIHVDNKSTIALAKNPVFHDRSKQIDTRFHFIRDCISRKEVQVEYVKTQDQIADIFTKPLKVNVFNNLRTL
Y+A V A+WL+ LL + I +NP I+ DN+ I++A NP H R+K ID ++HF R+ + + +EY+ T++Q+ADIFTKPL F LR
Subjt: YVAAASCVCHAVWLRNLLKKVGILQDNPTVIHVDNKSTIALAKNPVFHDRSKQIDTRFHFIRDCISRKEVQVEYVKTQDQIADIFTKPLKVNVFNNLRTL
Query: LGVFQ
LG+ Q
Subjt: LGVFQ
|
|
| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 4.7e-55 | 33.66 | Show/hide |
Query: MDVKSAFLNGYLEEEVYLEQPPGYCVKGQEYKVLKLKKTLYGLKQAPRIWNSKINKYFLDNGYLRCPYEHSLYIKVNGHGDIL-----------------
+DVK+AFL+G LEEE+Y+EQP G+ V G+++ V KL K+LYGLKQAPR W K + + YL+ + +Y K + +
Subjt: MDVKSAFLNGYLEEEVYLEQPPGYCVKGQEYKVLKLKKTLYGLKQAPRIWNSKINKYFLDNGYLRCPYEHSLYIKVNGHGDIL-----------------
Query: -----------------------------------------------------------PVATPIETGTKLSKH------EEGDDVDPSYFKSLVESLRY
PV+TP+ KLSK EE ++ + S V SL Y
Subjt: -----------------------------------------------------------PVATPIETGTKLSKH------EEGDDVDPSYFKSLVESLRY
Query: -LTCTRPYILFSVGLVSRFMESPTTTHLKVAKRILRYLRGTLDYGLLYSSSKEFKLEGYCDSDWAGDTNDRKSTSGYVFFIGNTAFTWSSKKQPIVTLST
+ CTRP I +VG+VSRF+E+P H + K ILRYLRGT L + S L+GY D+D AGD ++RKS++GY+F A +W SK Q V LST
Subjt: -LTCTRPYILFSVGLVSRFMESPTTTHLKVAKRILRYLRGTLDYGLLYSSSKEFKLEGYCDSDWAGDTNDRKSTSGYVFFIGNTAFTWSSKKQPIVTLST
Query: CEAEYVAAASCVCHAVWLRNLLKKVGILQDNPTVIHVDNKSTIALAKNPVFHDRSKQIDTRFHFIRDCISRKEVQVEYVKTQDQIADIFTKPLKVNVFNN
EAEY+AA +WL+ L+++G L V++ D++S I L+KN ++H R+K ID R+H+IR+ + + ++V + T + AD+ TK + N F
Subjt: CEAEYVAAASCVCHAVWLRNLLKKVGILQDNPTVIHVDNKSTIALAKNPVFHDRSKQIDTRFHFIRDCISRKEVQVEYVKTQDQIADIFTKPLKVNVFNN
Query: LRTLLGV
+ L+G+
Subjt: LRTLLGV
|
|
| P92519 Uncharacterized mitochondrial protein AtMg00810 | 2.1e-26 | 38.96 | Show/hide |
Query: DILPVATPIETGTKLSKHEEGDDVDPSYFKSLVESLRYLTCTRPYILFSVGLVSRFMESPTTTHLKVAKRILRYLRGTLDYGLLYSSSKEFKLEGYCDSD
D P++TP+ S DPS F+S+V +L+YLT TRP I ++V +V + M PT + KR+LRY++GT+ +GL + + ++ +CDSD
Subjt: DILPVATPIETGTKLSKHEEGDDVDPSYFKSLVESLRYLTCTRPYILFSVGLVSRFMESPTTTHLKVAKRILRYLRGTLDYGLLYSSSKEFKLEGYCDSD
Query: WAGDTNDRKSTSGYVFFIGNTAFTWSSKKQPIVTLSTCEAEYVAAASCVCHAVW
WAG T+ R+ST+G+ F+G +WS+K+QP V+ S+ E EY A A W
Subjt: WAGDTNDRKSTSGYVFFIGNTAFTWSSKKQPIVTLSTCEAEYVAAASCVCHAVW
|
|
| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 7.6e-61 | 34.76 | Show/hide |
Query: MDVKSAFLNGYLEEEVYLEQPPGYCVKGQEYKVLKLKKTLYGLKQAPRIWNSKINKYFLDNGYLRCPYEHSLYIKVNGHG---------DIL--------
+DV +AFL G L ++VY+ QPPG+ K + V KL+K LYGLKQAPR W ++ Y L G++ + SL++ G DIL
Subjt: MDVKSAFLNGYLEEEVYLEQPPGYCVKGQEYKVLKLKKTLYGLKQAPRIWNSKINKYFLDNGYLRCPYEHSLYIKVNGHG---------DIL--------
Query: --------------------------------------------------------PVATPIETGTKLSKHEEGDDVDPSYFKSLVESLRYLTCTRPYIL
PV TP+ KLS + DP+ ++ +V SL+YL TRP I
Subjt: --------------------------------------------------------PVATPIETGTKLSKHEEGDDVDPSYFKSLVESLRYLTCTRPYIL
Query: FSVGLVSRFMESPTTTHLKVAKRILRYLRGTLDYGLLYSSSKEFKLEGYCDSDWAGDTNDRKSTSGYVFFIGNTAFTWSSKKQPIVTLSTCEAEYVAAAS
++V +S+FM PT HL+ KRILRYL GT ++G+ L Y D+DWAGD +D ST+GY+ ++G+ +WSSKKQ V S+ EAEY + A+
Subjt: FSVGLVSRFMESPTTTHLKVAKRILRYLRGTLDYGLLYSSSKEFKLEGYCDSDWAGDTNDRKSTSGYVFFIGNTAFTWSSKKQPIVTLSTCEAEYVAAAS
Query: CVCHAVWLRNLLKKVGILQDNPTVIHVDNKSTIALAKNPVFHDRSKQIDTRFHFIRDCISRKEVQVEYVKTQDQIADIFTKPLKVNVFNNLRTLLGV
W+ +LL ++GI P VI+ DN L NPVFH R K I +HFIR+ + ++V +V T DQ+AD TKPL F N + +GV
Subjt: CVCHAVWLRNLLKKVGILQDNPTVIHVDNKSTIALAKNPVFHDRSKQIDTRFHFIRDCISRKEVQVEYVKTQDQIADIFTKPLKVNVFNNLRTLLGV
|
|
| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 2.6e-61 | 34.34 | Show/hide |
Query: MDVKSAFLNGYLEEEVYLEQPPGYCVKGQEYKVLKLKKTLYGLKQAPRIWNSKINKYFLDNGYLRCPYEHSLYIKVNGHG---------DIL--------
+DV +AFL G L +EVY+ QPPG+ K + V +L+K +YGLKQAPR W ++ Y L G++ + SL++ G DIL
Subjt: MDVKSAFLNGYLEEEVYLEQPPGYCVKGQEYKVLKLKKTLYGLKQAPRIWNSKINKYFLDNGYLRCPYEHSLYIKVNGHG---------DIL--------
Query: --------------------------------------------------------PVATPIETGTKLSKHEEGDDVDPSYFKSLVESLRYLTCTRPYIL
PVATP+ T KL+ H DP+ ++ +V SL+YL TRP +
Subjt: --------------------------------------------------------PVATPIETGTKLSKHEEGDDVDPSYFKSLVESLRYLTCTRPYIL
Query: FSVGLVSRFMESPTTTHLKVAKRILRYLRGTLDYGLLYSSSKEFKLEGYCDSDWAGDTNDRKSTSGYVFFIGNTAFTWSSKKQPIVTLSTCEAEYVAAAS
++V +S++M PT H KR+LRYL GT D+G+ L Y D+DWAGDT+D ST+GY+ ++G+ +WSSKKQ V S+ EAEY + A+
Subjt: FSVGLVSRFMESPTTTHLKVAKRILRYLRGTLDYGLLYSSSKEFKLEGYCDSDWAGDTNDRKSTSGYVFFIGNTAFTWSSKKQPIVTLSTCEAEYVAAAS
Query: CVCHAVWLRNLLKKVGILQDNPTVIHVDNKSTIALAKNPVFHDRSKQIDTRFHFIRDCISRKEVQVEYVKTQDQIADIFTKPLKVNVFNNLRTLLGVFQ
W+ +LL ++GI +P VI+ DN L NPVFH R K I +HFIR+ + ++V +V T DQ+AD TKPL F N +GV +
Subjt: CVCHAVWLRNLLKKVGILQDNPTVIHVDNKSTIALAKNPVFHDRSKQIDTRFHFIRDCISRKEVQVEYVKTQDQIADIFTKPLKVNVFNNLRTLLGVFQ
|
|
| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 8 | 3.9e-44 | 28.53 | Show/hide |
Query: MDVKSAFLNGYLEEEVYLEQPPGYCVKGQE----YKVLKLKKTLYGLKQAPRIWNSKINKYFLDNGYLRCPYEHSLYIKVNGH---------GDIL----
+D+ +AFLNG L+EE+Y++ PPGY + + V LKK++YGLKQA R W K + + G+++ +H+ ++K+ DI+
Subjt: MDVKSAFLNGYLEEEVYLEQPPGYCVKGQE----YKVLKLKKTLYGLKQAPRIWNSKINKYFLDNGYLRCPYEHSLYIKVNGH---------GDIL----
Query: ------------------------------------------------------------PVATPIETGTKLSKHEEGDDVDPSYFKSLVESLRYLTCTR
P + P++ S H GD VD ++ L+ L YL TR
Subjt: ------------------------------------------------------------PVATPIETGTKLSKHEEGDDVDPSYFKSLVESLRYLTCTR
Query: PYILFSVGLVSRFMESPTTTHLKVAKRILRYLRGTLDYGLLYSSSKEFKLEGYCDSDWAGDTNDRKSTSGYVFFIGNTAFTWSSKKQPIVTLSTCEAEYV
I F+V +S+F E+P H + +IL Y++GT+ GL YSS E +L+ + D+ + + R+ST+GY F+G + +W SKKQ +V+ S+ EAEY
Subjt: PYILFSVGLVSRFMESPTTTHLKVAKRILRYLRGTLDYGLLYSSSKEFKLEGYCDSDWAGDTNDRKSTSGYVFFIGNTAFTWSSKKQPIVTLSTCEAEYV
Query: AAASCVCHAVWLRNLLKKVGILQDNPTVIHVDNKSTIALAKNPVFHDRSKQIDTRFHFIRD
A + +WL +++ + PT++ DN + I +A N VFH+R+K I++ H +R+
Subjt: AAASCVCHAVWLRNLLKKVGILQDNPTVIHVDNKSTIALAKNPVFHDRSKQIDTRFHFIRD
|
|
| ATMG00240.1 Gag-Pol-related retrotransposon family protein | 1.9e-11 | 36.36 | Show/hide |
Query: YLTCTRPYILFSVGLVSRFMESPTTTHLKVAKRILRYLRGTLDYGLLYSSSKEFKLEGYCDSDWAGDTNDRKSTSGY
YLT TRP + F+V +S+F + T ++ ++L Y++GT+ GL YS++ + +L+ + DSDWA + R+S +G+
Subjt: YLTCTRPYILFSVGLVSRFMESPTTTHLKVAKRILRYLRGTLDYGLLYSSSKEFKLEGYCDSDWAGDTNDRKSTSGY
|
|
| ATMG00810.1 DNA/RNA polymerases superfamily protein | 1.5e-27 | 38.96 | Show/hide |
Query: DILPVATPIETGTKLSKHEEGDDVDPSYFKSLVESLRYLTCTRPYILFSVGLVSRFMESPTTTHLKVAKRILRYLRGTLDYGLLYSSSKEFKLEGYCDSD
D P++TP+ S DPS F+S+V +L+YLT TRP I ++V +V + M PT + KR+LRY++GT+ +GL + + ++ +CDSD
Subjt: DILPVATPIETGTKLSKHEEGDDVDPSYFKSLVESLRYLTCTRPYILFSVGLVSRFMESPTTTHLKVAKRILRYLRGTLDYGLLYSSSKEFKLEGYCDSD
Query: WAGDTNDRKSTSGYVFFIGNTAFTWSSKKQPIVTLSTCEAEYVAAASCVCHAVW
WAG T+ R+ST+G+ F+G +WS+K+QP V+ S+ E EY A A W
Subjt: WAGDTNDRKSTSGYVFFIGNTAFTWSSKKQPIVTLSTCEAEYVAAASCVCHAVW
|
|
