CuGenDBv2

Gene ID	Cmc10g0281241
Organism	Cucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Retrovirus-related Pol polyprotein from transposon 17.6
Genome location	CMiso1.1chr10:19464131..19464748
RNA-Seq Expression	Cmc10g0281241
Synteny	Cmc10g0281241
Gene Ontology terms	GO:0005488 - binding (molecular function)
InterPro domains	IPR041577 - Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain IPR043128 - Reverse transcriptase/Diguanylate cyclase domain IPR043502 - DNA/RNA polymerase superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0037939.1 Retrovirus-related Pol polyprotein from transposon 17.6 [Cucumis melo var. makuwa]

1.7e-68

71.36

Show/hide

Query:  MPFGLSNAPS--------------------IFDDILVFSRTLDEYHVHLQQLFKALANSKLYINLKKCLFFGEEIALLGFIIRKNHILMDEKKVEAIKNW
        MPFGLSNAPS                     FDDILVFSRTLDE+HVHLQQLF+ALA ++LYINLKKC+F  EEIA LGFIIRKNHILMDEKKV+AIKNW
Subjt:  MPFGLSNAPS--------------------IFDDILVFSRTLDEYHVHLQQLFKALANSKLYINLKKCLFFGEEIALLGFIIRKNHILMDEKKVEAIKNW

Query:  LIPTSIKEVQAFVSLASFCSKFIHNFSTITTPITDCLEKVTFLLRNKQQDNFQSLKEKLSNKLVLKLPNFFQPFKVVVDACGTGIGVVLSQLGHLIEYF
         I TS+KEVQAFV LASF  KFIHNF+TI  PITDCL+K TFL  N+QQD+F+ LKE LSN  VLKLP+F QPF V VDACGTGIGVVLSQ GH IEYF
Subjt:  LIPTSIKEVQAFVSLASFCSKFIHNFSTITTPITDCLEKVTFLLRNKQQDNFQSLKEKLSNKLVLKLPNFFQPFKVVVDACGTGIGVVLSQLGHLIEYF

KAA0051933.1 putative gag-pol polyprotein [Cucumis melo var. makuwa]

5.2e-78

70.22

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Query:  MPFGLSNAPS--------------------IFDDILVFSRTLDEYHVHLQQLFKALANSKLYINLKKCLFFGEEIALLGFIIRKNHILMDEKKVEAIKNW
        MPFGLSNAPS                     FDDIL FSRTLDE+H+HLQQLF+ALA ++LYINLKKC+F  EEIA LGFIIRKNHILMDEKKVEAIKNW
Subjt:  MPFGLSNAPS--------------------IFDDILVFSRTLDEYHVHLQQLFKALANSKLYINLKKCLFFGEEIALLGFIIRKNHILMDEKKVEAIKNW

Query:  LIPTSIKEVQAFVSLASFCSKFIHNFSTITTPITDCLEKVTFLLRNKQQDNFQSLKEKLSNKLVLKLPNFFQPFKVVVDACGTGIGVVLSQLGHLIEYFS
         IPTS+KEVQAFV LASF  KFIHNF TI  PI DCL+K +FL  NK+QD+F+ LKEKLSN  +L+LP+F QPF+V VDACGTGIG  LSQ GH IE+FS
Subjt:  LIPTSIKEVQAFVSLASFCSKFIHNFSTITTPITDCLEKVTFLLRNKQQDNFQSLKEKLSNKLVLKLPNFFQPFKVVVDACGTGIGVVLSQLGHLIEYFS

Query:  LKLSPSRQTWSTYKQEMYALVCALK
         KL PSRQTWSTY+QEMYALV ALK
Subjt:  LKLSPSRQTWSTYKQEMYALVCALK

KAA0054966.1 transposon Ty3-I Gag-Pol polyprotein isoform X1 [Cucumis melo var. makuwa]

2.9e-65

60.89

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Query:  MPFGLSNAPS--------------------IFDDILVFSRTLDEYHVHLQQLFKALANSKLYINLKKCLFFGEEIALLGFIIRKNHILMDEKKVEAIKNW
        MPF LSNAPS                     FDDILVFS+T D++  H+ QLF+ L +++LY+NLKKC+F   EIA LGFIIRK+H+LMDEKKVEAIKNW
Subjt:  MPFGLSNAPS--------------------IFDDILVFSRTLDEYHVHLQQLFKALANSKLYINLKKCLFFGEEIALLGFIIRKNHILMDEKKVEAIKNW

Query:  LIPTSIKEVQAFVSLASFCSKFIHNFSTITTPITDCLEKVTFLLRNKQQDNFQSLKEKLSNKLVLKLPNFFQPFKVVVDACGTGIGVVLSQLGHLIEYFS
          PT++ +VQAF+ LASF  KFI N S+I  PITDCL+K  F    KQQD+F  LKE L N LVLKLP+FFQ F+V VD CGTGIG VLSQ  H IEYFS
Subjt:  LIPTSIKEVQAFVSLASFCSKFIHNFSTITTPITDCLEKVTFLLRNKQQDNFQSLKEKLSNKLVLKLPNFFQPFKVVVDACGTGIGVVLSQLGHLIEYFS

Query:  LKLSPSRQTWSTYKQEMYALVCALK
         +LS SRQ+WSTY+QE+YALV ALK
Subjt:  LKLSPSRQTWSTYKQEMYALVCALK

KAA0057262.1 putative gag-pol polyprotein [Cucumis melo var. makuwa]

2.9e-60

59.81

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Query:  MPFGLSNAPS--------------------IFDDILVFSRTLDEYHVHLQQLFKALANSKLYINLKKCLFFGEEIALLGFIIRKNHILMDEKKVEAIKNW
        M FGLSNAPS                     FDDILVFS+T D++  H+ QLF+ L +++LY+NLKKC+F   EIA LGFIIRK+H+LMDEKKVEAIKNW
Subjt:  MPFGLSNAPS--------------------IFDDILVFSRTLDEYHVHLQQLFKALANSKLYINLKKCLFFGEEIALLGFIIRKNHILMDEKKVEAIKNW

Query:  LIPTSIKEVQAFVSLASFCSKFIHNFSTITTPITDCLEKVTFLLRNKQQDNFQSLKEKLSNKLVLKLPNFFQPFKVVVDACGTGIGVVLSQLGHLIEYFS
           T++K+VQAF+ LASF  KFI NFS+I  PITDCL+K  F    KQQ +F  LKE LSN  VLKL +F Q F+V VDACGTGIGVV+SQ GH I YFS
Subjt:  LIPTSIKEVQAFVSLASFCSKFIHNFSTITTPITDCLEKVTFLLRNKQQDNFQSLKEKLSNKLVLKLPNFFQPFKVVVDACGTGIGVVLSQLGHLIEYFS

Query:  LKLSPSRQTWSTYK
         KLS SRQ+WSTY+
Subjt:  LKLSPSRQTWSTYK

TYK06567.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]

3.4e-69

66.22

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Query:  MPFGLSNAPS--------------------IFDDILVFSRTLDEYHVHLQQLFKALANSKLYINLKKCLFFGEEIALLGFIIRKNHILMDEKKVEAIKNW
        MPFGLSNAPS                     FDDILVFSR L E++ HL Q+F+ LA ++LYINLKKC F  EEIA LGFII+KNHILMDEKKVEAI+NW
Subjt:  MPFGLSNAPS--------------------IFDDILVFSRTLDEYHVHLQQLFKALANSKLYINLKKCLFFGEEIALLGFIIRKNHILMDEKKVEAIKNW

Query:  LIPTSIKEVQAFVSLASFCSKFIHNFSTITTPITDCLEKVTFLLRNKQQDNFQSLKEKLSNKLVLKLPNFFQPFKVVVDACGTGIGVVLSQLGHLIEYFS
         IP SIKEVQAF+ LASF  KFI+NFSTI   ITDCL+K  FL   KQQD+F++LK+KLSNK VLKLP F QPF+VVVDA  TG G VLSQ GH IEYFS
Subjt:  LIPTSIKEVQAFVSLASFCSKFIHNFSTITTPITDCLEKVTFLLRNKQQDNFQSLKEKLSNKLVLKLPNFFQPFKVVVDACGTGIGVVLSQLGHLIEYFS

Query:  LKLSPSRQTWSTYKQEMYALVCALK
         KL+ SRQ  STY+QEMYALV ALK
Subjt:  LKLSPSRQTWSTYKQEMYALVCALK

TrEMBL top hits

e value

%identity

Alignment

A0A5D3C402 DNA/RNA polymerases superfamily protein

1.6e-69

66.22

Show/hide

Query:  MPFGLSNAPS--------------------IFDDILVFSRTLDEYHVHLQQLFKALANSKLYINLKKCLFFGEEIALLGFIIRKNHILMDEKKVEAIKNW
        MPFGLSNAPS                     FDDILVFSR L E++ HL Q+F+ LA ++LYINLKKC F  EEIA LGFII+KNHILMDEKKVEAI+NW
Subjt:  MPFGLSNAPS--------------------IFDDILVFSRTLDEYHVHLQQLFKALANSKLYINLKKCLFFGEEIALLGFIIRKNHILMDEKKVEAIKNW

Query:  LIPTSIKEVQAFVSLASFCSKFIHNFSTITTPITDCLEKVTFLLRNKQQDNFQSLKEKLSNKLVLKLPNFFQPFKVVVDACGTGIGVVLSQLGHLIEYFS
         IP SIKEVQAF+ LASF  KFI+NFSTI   ITDCL+K  FL   KQQD+F++LK+KLSNK VLKLP F QPF+VVVDA  TG G VLSQ GH IEYFS
Subjt:  LIPTSIKEVQAFVSLASFCSKFIHNFSTITTPITDCLEKVTFLLRNKQQDNFQSLKEKLSNKLVLKLPNFFQPFKVVVDACGTGIGVVLSQLGHLIEYFS

Query:  LKLSPSRQTWSTYKQEMYALVCALK
         KL+ SRQ  STY+QEMYALV ALK
Subjt:  LKLSPSRQTWSTYKQEMYALVCALK

A0A5D3CPI6 Putative gag-pol polyprotein

2.5e-78

70.22

Show/hide

Query:  MPFGLSNAPS--------------------IFDDILVFSRTLDEYHVHLQQLFKALANSKLYINLKKCLFFGEEIALLGFIIRKNHILMDEKKVEAIKNW
        MPFGLSNAPS                     FDDIL FSRTLDE+H+HLQQLF+ALA ++LYINLKKC+F  EEIA LGFIIRKNHILMDEKKVEAIKNW
Subjt:  MPFGLSNAPS--------------------IFDDILVFSRTLDEYHVHLQQLFKALANSKLYINLKKCLFFGEEIALLGFIIRKNHILMDEKKVEAIKNW

Query:  LIPTSIKEVQAFVSLASFCSKFIHNFSTITTPITDCLEKVTFLLRNKQQDNFQSLKEKLSNKLVLKLPNFFQPFKVVVDACGTGIGVVLSQLGHLIEYFS
         IPTS+KEVQAFV LASF  KFIHNF TI  PI DCL+K +FL  NK+QD+F+ LKEKLSN  +L+LP+F QPF+V VDACGTGIG  LSQ GH IE+FS
Subjt:  LIPTSIKEVQAFVSLASFCSKFIHNFSTITTPITDCLEKVTFLLRNKQQDNFQSLKEKLSNKLVLKLPNFFQPFKVVVDACGTGIGVVLSQLGHLIEYFS

Query:  LKLSPSRQTWSTYKQEMYALVCALK
         KL PSRQTWSTY+QEMYALV ALK
Subjt:  LKLSPSRQTWSTYKQEMYALVCALK

A0A5D3D575 Putative gag-pol polyprotein

1.4e-60

59.81

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Query:  MPFGLSNAPS--------------------IFDDILVFSRTLDEYHVHLQQLFKALANSKLYINLKKCLFFGEEIALLGFIIRKNHILMDEKKVEAIKNW
        M FGLSNAPS                     FDDILVFS+T D++  H+ QLF+ L +++LY+NLKKC+F   EIA LGFIIRK+H+LMDEKKVEAIKNW
Subjt:  MPFGLSNAPS--------------------IFDDILVFSRTLDEYHVHLQQLFKALANSKLYINLKKCLFFGEEIALLGFIIRKNHILMDEKKVEAIKNW

Query:  LIPTSIKEVQAFVSLASFCSKFIHNFSTITTPITDCLEKVTFLLRNKQQDNFQSLKEKLSNKLVLKLPNFFQPFKVVVDACGTGIGVVLSQLGHLIEYFS
           T++K+VQAF+ LASF  KFI NFS+I  PITDCL+K  F    KQQ +F  LKE LSN  VLKL +F Q F+V VDACGTGIGVV+SQ GH I YFS
Subjt:  LIPTSIKEVQAFVSLASFCSKFIHNFSTITTPITDCLEKVTFLLRNKQQDNFQSLKEKLSNKLVLKLPNFFQPFKVVVDACGTGIGVVLSQLGHLIEYFS

Query:  LKLSPSRQTWSTYK
         KLS SRQ+WSTY+
Subjt:  LKLSPSRQTWSTYK

A0A5D3D668 Retrovirus-related Pol polyprotein from transposon 17.6

8.1e-69

71.36

Show/hide

Query:  MPFGLSNAPS--------------------IFDDILVFSRTLDEYHVHLQQLFKALANSKLYINLKKCLFFGEEIALLGFIIRKNHILMDEKKVEAIKNW
        MPFGLSNAPS                     FDDILVFSRTLDE+HVHLQQLF+ALA ++LYINLKKC+F  EEIA LGFIIRKNHILMDEKKV+AIKNW
Subjt:  MPFGLSNAPS--------------------IFDDILVFSRTLDEYHVHLQQLFKALANSKLYINLKKCLFFGEEIALLGFIIRKNHILMDEKKVEAIKNW

Query:  LIPTSIKEVQAFVSLASFCSKFIHNFSTITTPITDCLEKVTFLLRNKQQDNFQSLKEKLSNKLVLKLPNFFQPFKVVVDACGTGIGVVLSQLGHLIEYF
         I TS+KEVQAFV LASF  KFIHNF+TI  PITDCL+K TFL  N+QQD+F+ LKE LSN  VLKLP+F QPF V VDACGTGIGVVLSQ GH IEYF
Subjt:  LIPTSIKEVQAFVSLASFCSKFIHNFSTITTPITDCLEKVTFLLRNKQQDNFQSLKEKLSNKLVLKLPNFFQPFKVVVDACGTGIGVVLSQLGHLIEYF

A0A5D3DGR0 Reverse transcriptase

1.4e-65

60.89

Show/hide

Query:  MPFGLSNAPS--------------------IFDDILVFSRTLDEYHVHLQQLFKALANSKLYINLKKCLFFGEEIALLGFIIRKNHILMDEKKVEAIKNW
        MPF LSNAPS                     FDDILVFS+T D++  H+ QLF+ L +++LY+NLKKC+F   EIA LGFIIRK+H+LMDEKKVEAIKNW
Subjt:  MPFGLSNAPS--------------------IFDDILVFSRTLDEYHVHLQQLFKALANSKLYINLKKCLFFGEEIALLGFIIRKNHILMDEKKVEAIKNW

Query:  LIPTSIKEVQAFVSLASFCSKFIHNFSTITTPITDCLEKVTFLLRNKQQDNFQSLKEKLSNKLVLKLPNFFQPFKVVVDACGTGIGVVLSQLGHLIEYFS
          PT++ +VQAF+ LASF  KFI N S+I  PITDCL+K  F    KQQD+F  LKE L N LVLKLP+FFQ F+V VD CGTGIG VLSQ  H IEYFS
Subjt:  LIPTSIKEVQAFVSLASFCSKFIHNFSTITTPITDCLEKVTFLLRNKQQDNFQSLKEKLSNKLVLKLPNFFQPFKVVVDACGTGIGVVLSQLGHLIEYFS

Query:  LKLSPSRQTWSTYKQEMYALVCALK
         +LS SRQ+WSTY+QE+YALV ALK
Subjt:  LKLSPSRQTWSTYKQEMYALVCALK

SwissProt top hits

e value

%identity

Alignment

P04323 Retrovirus-related Pol polyprotein from transposon 17.6

4.5e-32

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Query:  MPFGLSNAPSIF--------------------DDILVFSRTLDEYHVHLQQLFKALANSKLYINLKKCLFFGEEIALLGFIIRKNHILMDEKKVEAIKNW
        MPFGL NAP+ F                    DDI+VFS +LDE+   L  +F+ LA + L + L KC F  +E   LG ++  + I  + +K+EAI+ +
Subjt:  MPFGLSNAPSIF--------------------DDILVFSRTLDEYHVHLQQLFKALANSKLYINLKKCLFFGEEIALLGFIIRKNHILMDEKKVEAIKNW

Query:  LIPTSIKEVQAFVSLASFCSKFIHNFSTITTPITDCLEK-VTFLLRNKQQDN-FQSLKEKLSNKLVLKLPNFFQPFKVVVDACGTGIGVVLSQLGHLIEY
         IPT  KE++AF+ L  +  KFI NF+ I  P+T CL+K +     N + D+ F+ LK  +S   +LK+P+F + F +  DA    +G VLSQ GH + Y
Subjt:  LIPTSIKEVQAFVSLASFCSKFIHNFSTITTPITDCLEK-VTFLLRNKQQDN-FQSLKEKLSNKLVLKLPNFFQPFKVVVDACGTGIGVVLSQLGHLIEY

Query:  FSLKLSPSRQTWSTYKQEMYALVCALK
         S  L+     +ST ++E+ A+V A K
Subjt:  FSLKLSPSRQTWSTYKQEMYALVCALK

P10401 Retrovirus-related Pol polyprotein from transposon gypsy

1.5e-27

32.91

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Query:  MPFGLSNAPSIF--------------------DDILVFSRTLDEYHVHLQQLFKALANSKLYINLKKCLFFGEEIALLGFIIRKNHILMDEKKVEAIKNW
        +PFGL NA SIF                    DD+++FS    ++  H+  + K L ++ + ++ +K  FF E +  LGFI+ K+    D +KV+AI+ +
Subjt:  MPFGLSNAPSIF--------------------DDILVFSRTLDEYHVHLQQLFKALANSKLYINLKKCLFFGEEIALLGFIIRKNHILMDEKKVEAIKNW

Query:  LIPTSIKEVQAFVSLASFCSKFIHNFSTITTPITDCL------------EKVTFLLRNKQQDNFQSLKEKL-SNKLVLKLPNFFQPFKVVVDACGTGIGV
          P  + +V++F+ LAS+   FI +F+ I  PITD L            +K+       Q++ FQ L+  L S  ++LK P+F +PF +  DA  +GIG 
Subjt:  LIPTSIKEVQAFVSLASFCSKFIHNFSTITTPITDCL------------EKVTFLLRNKQQDNFQSLKEKL-SNKLVLKLPNFFQPFKVVVDACGTGIGV

Query:  VLSQLGHLIEYFSLKLSPSRQTWSTYKQEMYALVCAL
        VLSQ G  I   S  L    Q ++T ++E+ A+V AL
Subjt:  VLSQLGHLIEYFSLKLSPSRQTWSTYKQEMYALVCAL

P20825 Retrovirus-related Pol polyprotein from transposon 297

3.5e-29

35.24

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Query:  MPFGLSNAPSIF--------------------DDILVFSRTLDEYHVHLQQLFKALANSKLYINLKKCLFFGEEIALLGFIIRKNHILMDEKKVEAIKNW
        MPFGL NAP+ F                    DDI++FS +L E+   +Q +F  LA++ L + L KC F  +E   LG I+  + I  +  KV+AI ++
Subjt:  MPFGLSNAPSIF--------------------DDILVFSRTLDEYHVHLQQLFKALANSKLYINLKKCLFFGEEIALLGFIIRKNHILMDEKKVEAIKNW

Query:  LIPTSIKEVQAFVSLASFCSKFIHNFSTITTPITDCLEKVTFLLRNKQQ--DNFQSLKEKLSNKLVLKLPNFFQPFKVVVDACGTGIGVVLSQLGHLIEY
         IPT  KE++AF+ L  +  KFI N++ I  P+T CL+K T +   K +  + F+ LK  +    +L+LP+F + F +  DA    +G VLSQ GH I +
Subjt:  LIPTSIKEVQAFVSLASFCSKFIHNFSTITTPITDCLEKVTFLLRNKQQ--DNFQSLKEKLSNKLVLKLPNFFQPFKVVVDACGTGIGVVLSQLGHLIEY

Query:  FSLKLSPSRQTWSTYKQEMYALVCALK
         S  L+     +S  ++E+ A+V A K
Subjt:  FSLKLSPSRQTWSTYKQEMYALVCALK

Q8I7P9 Retrovirus-related Pol polyprotein from transposon opus

3.1e-25

30.83

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Query:  MPFGLSNAPSIF--------------------DDILVFSRTLDEYHVHLQQLFKALANSKLYINLKKCLFFGEEIALLGFIIRKNHILMDEKKVEAIKNW
        +PFGL NAP+IF                    DDI+VFS   D +  +L+ +  +L+ + L +NL+K  F   ++  LG+I+  + I  D KKV AI   
Subjt:  MPFGLSNAPSIF--------------------DDILVFSRTLDEYHVHLQQLFKALANSKLYINLKKCLFFGEEIALLGFIIRKNHILMDEKKVEAIKNW

Query:  LIPTSIKEVQAFVSLASFCSKFIHNFSTITTPITDCL------------EKVTFLLRNKQQDNFQSLKEKLSNKLVLKLPNFFQPFKVVVDACGTGIGVV
          PTS+KE++ F+ + S+  KFI +++ +  P+T+               KV   L      +F  LK  L +  +L  P F +PF +  DA    IG V
Subjt:  LIPTSIKEVQAFVSLASFCSKFIHNFSTITTPITDCL------------EKVTFLLRNKQQDNFQSLKEKLSNKLVLKLPNFFQPFKVVVDACGTGIGVV

Query:  LSQ----LGHLIEYFSLKLSPSRQTWSTYKQEMYALVCAL
        LSQ        I Y S  L+ + + ++T ++EM A++ +L
Subjt:  LSQ----LGHLIEYFSLKLSPSRQTWSTYKQEMYALVCAL

Q99315 Transposon Ty3-G Gag-Pol polyprotein

1.9e-19

30.57

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Query:  MPFGLSNAPSIF------------------DDILVFSRTLDEYHVHLQQLFKALANSKLYINLKKCLFFGEEIALLGFIIRKNHILMDEKKVEAIKNWLI
        MPFGL NAPS F                  DDIL+FS + +E+  HL  + + L N  L +  KKC F  EE   LG+ I    I   + K  AI+++  
Subjt:  MPFGLSNAPSIF------------------DDILVFSRTLDEYHVHLQQLFKALANSKLYINLKKCLFFGEEIALLGFIIRKNHILMDEKKVEAIKNWLI

Query:  PTSIKEVQAFVSLASFCSKFIHNFSTITTPITDCL-EKVTFLLRNKQQDNFQSLKEKLSNKLVLKLPNFFQPFKVVVDACGTGIGVVLSQLGH------L
        P ++K+ Q F+ + ++  +FI N S I  PI   + +K  +    KQ      LK+ L N  VL   N    +++  DA   GIG VL ++ +      +
Subjt:  PTSIKEVQAFVSLASFCSKFIHNFSTITTPITDCL-EKVTFLLRNKQQDNFQSLKEKLSNKLVLKLPNFFQPFKVVVDACGTGIGVVLSQLGH------L

Query:  IEYFSLKLSPSRQTWSTYKQEMYALVCAL
        + YFS  L  +++ +   + E+  ++ AL
Subjt:  IEYFSLKLSPSRQTWSTYKQEMYALVCAL

Arabidopsis top hits

e value

%identity

Alignment

ATMG00860.1 DNA/RNA polymerases superfamily protein

3.8e-10

30.23

Show/hide

Query:  HLQQLFKALANSKLYINLKKCLFFGEEIALLG--FIIRKNHILMDEKKVEAIKNWLIPTSIKEVQAFVSLASFCSKFIHNFSTITTPITDCLEKVTFLLR
        HL  + +     + Y N KKC F   +IA LG   II    +  D  K+EA+  W  P +  E++ F+ L  +  +F+ N+  I  P+T+ L+K +    
Subjt:  HLQQLFKALANSKLYINLKKCLFFGEEIALLG--FIIRKNHILMDEKKVEAIKNWLIPTSIKEVQAFVSLASFCSKFIHNFSTITTPITDCLEKVTFLLR

Query:  NKQQDNFQSLKEKLSNKLVLKLPNFFQPF
              F++LK  ++   VL LP+   PF
Subjt:  NKQQDNFQSLKEKLSNKLVLKLPNFFQPF

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGCCATTTGGACTCTCTAATGCTCCTAGCATATTTGATGACATTTTGGTTTTTAGCAGAACACTAGATGAATATCATGTGCATCTACAACAATTGTTCAAAGCT
TTAGCCAATAGTAAATTATATATCAACCTTAAGAAATGCCTCTTTTTTGGGGAAGAAATAGCATTATTGGGATTCATCATTAGGAAGAATCATATCCTAATGGAT
GAAAAGAAAGTTGAAGCTATAAAAAACTGGCTTATACCTACTTCAATAAAAGAAGTTCAAGCATTTGTTAGTTTAGCATCATTCTGCAGCAAATTTATTCATAAC
TTCAGCACCATTACTACACCTATTACTGATTGCTTGGAGAAAGTAACCTTCCTATTGAGAAATAAACAACAAGACAACTTTCAATCATTGAAGGAAAAGCTGAGT
AACAAACTAGTTTTGAAGCTCCCAAATTTTTTCCAACCATTTAAGGTTGTTGTAGATGCTTGTGGAACCGGTATTGGAGTTGTCTTATCTCAATTAGGCCATCTT
ATTGAATATTTCAGTTTGAAACTCAGTCCATCAAGGCAGACATGGAGTACCTATAAACAAGAGATGTATGCCCTCGTTTGTGCATTAAAATAG

mRNA sequence

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Protein sequence

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MPFGLSNAPSIFDDILVFSRTLDEYHVHLQQLFKALANSKLYINLKKCLFFGEEIALLGFIIRKNHILMDEKKVEAIKNWLIPTSIKEVQAFVSLASFCSKFIHN
FSTITTPITDCLEKVTFLLRNKQQDNFQSLKEKLSNKLVLKLPNFFQPFKVVVDACGTGIGVVLSQLGHLIEYFSLKLSPSRQTWSTYKQEMYALVCALK

Cmc10g0281241 (gene) of Melon (Charmono) v1.1 genome