CuGenDBv2

Gene ID	Cmc10g0281401
Organism	Cucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Genome location	CMiso1.1chr10:19839274..19840935
RNA-Seq Expression	Cmc10g0281401
Synteny	Cmc10g0281401
Gene Ontology terms	GO:0015074 - DNA integration (biological process) GO:0003676 - nucleic acid binding (molecular function)
InterPro domains	IPR000477 - Reverse transcriptase domain IPR001584 - Integrase, catalytic core IPR012337 - Ribonuclease H-like superfamily IPR036397 - Ribonuclease H superfamily IPR041373 - Reverse transcriptase, RNase H-like domain IPR041588 - Integrase zinc-binding domain IPR043128 - Reverse transcriptase/Diguanylate cyclase domain IPR043502 - DNA/RNA polymerase superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0025998.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

98.55

Show/hide

Query:  MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDLAKIEAVTNW
        MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVD AKIEAVTNW
Subjt:  MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDLAKIEAVTNW

Query:  TRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYA
        TRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYA
Subjt:  TRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYA

Query:  SRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITK
        SRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITK
Subjt:  SRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITK

Query:  QTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLAEKRRMVETEQGEDFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMH
        QTPLLRDFERAEIAVSVGEVTAQLAQL+VQPTLRQKIIAAQL+DPYLAEKRR+VETEQGE FSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMH
Subjt:  QTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLAEKRRMVETEQGEDFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMH

Query:  PGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQMKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTA
        PGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQ+KAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTA
Subjt:  PGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQMKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTA

Query:  SKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHP
        SKWGQLYMTEIVRLHGVPVSI+SDRDARFTSKFWKGLQ+ALGTRLDFSTAFHP
Subjt:  SKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHP

KAA0062342.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

98.55

Show/hide

Query:  MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDLAKIEAVTNW
        MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVD AKIEAVTNW
Subjt:  MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDLAKIEAVTNW

Query:  TRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYA
        TRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYA
Subjt:  TRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYA

Query:  SRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITK
        SRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITK
Subjt:  SRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITK

Query:  QTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLAEKRRMVETEQGEDFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMH
        QTPLLRDFERAEIAVSVGEVTAQLAQL+VQPTLRQKIIAAQL+DPYLAEKRR+VETEQGE FSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMH
Subjt:  QTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLAEKRRMVETEQGEDFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMH

Query:  PGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQMKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTA
        PGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQ+KAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTA
Subjt:  PGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQMKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTA

Query:  SKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHP
        SKWGQLYMTEIVRLHGVPVSI+SDRDARFTSKFWKGLQ+ALGTRLDFSTAFHP
Subjt:  SKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHP

TYK01576.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

98.55

Show/hide

Query:  MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDLAKIEAVTNW
        MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVD AKIEAVTNW
Subjt:  MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDLAKIEAVTNW

Query:  TRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYA
        TRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYA
Subjt:  TRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYA

Query:  SRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITK
        SRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITK
Subjt:  SRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITK

Query:  QTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLAEKRRMVETEQGEDFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMH
        QTPLLRDFERAEIAVSVGEVTAQLAQL+VQPTLRQKIIAAQL+DPYLAEKRR+VETEQGE FSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMH
Subjt:  QTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLAEKRRMVETEQGEDFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMH

Query:  PGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQMKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTA
        PGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQ+KAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTA
Subjt:  PGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQMKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTA

Query:  SKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHP
        SKWGQLYMTEIVRLHGVPVSI+SDRDARFTSKFWKGLQ+ALGTRLDFSTAFHP
Subjt:  SKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHP

TYK06888.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

98.55

Show/hide

Query:  MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDLAKIEAVTNW
        MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVD AKIEAVTNW
Subjt:  MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDLAKIEAVTNW

Query:  TRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYA
        TRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYA
Subjt:  TRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYA

Query:  SRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITK
        SRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITK
Subjt:  SRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITK

Query:  QTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLAEKRRMVETEQGEDFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMH
        QTPLLRDFERAEIAVSVGEVTAQLAQL+VQPTLRQKIIAAQL+DPYLAEKRR+VETEQGE FSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMH
Subjt:  QTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLAEKRRMVETEQGEDFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMH

Query:  PGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQMKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTA
        PGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQ+KAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTA
Subjt:  PGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQMKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTA

Query:  SKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHP
        SKWGQLYMTEIVRLHGVPVSI+SDRDARFTSKFWKGLQ+ALGTRLDFSTAFHP
Subjt:  SKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHP

TYK20443.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

98.55

Show/hide

Query:  MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDLAKIEAVTNW
        MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVD AKIEAVTNW
Subjt:  MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDLAKIEAVTNW

Query:  TRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYA
        TRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYA
Subjt:  TRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYA

Query:  SRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITK
        SRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITK
Subjt:  SRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITK

Query:  QTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLAEKRRMVETEQGEDFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMH
        QTPLLRDFERAEIAVSVGEVTAQLAQL+VQPTLRQKIIAAQL+DPYLAEKRR+VETEQGE FSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMH
Subjt:  QTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLAEKRRMVETEQGEDFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMH

Query:  PGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQMKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTA
        PGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQ+KAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTA
Subjt:  PGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQMKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTA

Query:  SKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHP
        SKWGQLYMTEIVRLHGVPVSI+SDRDARFTSKFWKGLQ+ALGTRLDFSTAFHP
Subjt:  SKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHP

TrEMBL top hits

e value

%identity

Alignment

A0A5A7SIJ5 Reverse transcriptase

0.0e+00

98.55

Show/hide

Query:  MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDLAKIEAVTNW
        MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVD AKIEAVTNW
Subjt:  MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDLAKIEAVTNW

Query:  TRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYA
        TRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYA
Subjt:  TRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYA

Query:  SRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITK
        SRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITK
Subjt:  SRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITK

Query:  QTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLAEKRRMVETEQGEDFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMH
        QTPLLRDFERAEIAVSVGEVTAQLAQL+VQPTLRQKIIAAQL+DPYLAEKRR+VETEQGE FSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMH
Subjt:  QTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLAEKRRMVETEQGEDFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMH

Query:  PGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQMKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTA
        PGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQ+KAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTA
Subjt:  PGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQMKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTA

Query:  SKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHP
        SKWGQLYMTEIVRLHGVPVSI+SDRDARFTSKFWKGLQ+ALGTRLDFSTAFHP
Subjt:  SKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHP

A0A5A7V2A0 Reverse transcriptase

0.0e+00

98.55

Show/hide

Query:  MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDLAKIEAVTNW
        MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVD AKIEAVTNW
Subjt:  MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDLAKIEAVTNW

Query:  TRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYA
        TRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYA
Subjt:  TRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYA

Query:  SRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITK
        SRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITK
Subjt:  SRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITK

Query:  QTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLAEKRRMVETEQGEDFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMH
        QTPLLRDFERAEIAVSVGEVTAQLAQL+VQPTLRQKIIAAQL+DPYLAEKRR+VETEQGE FSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMH
Subjt:  QTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLAEKRRMVETEQGEDFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMH

Query:  PGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQMKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTA
        PGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQ+KAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTA
Subjt:  PGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQMKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTA

Query:  SKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHP
        SKWGQLYMTEIVRLHGVPVSI+SDRDARFTSKFWKGLQ+ALGTRLDFSTAFHP
Subjt:  SKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHP

A0A5D3BTN0 Reverse transcriptase

0.0e+00

98.55

Show/hide

Query:  MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDLAKIEAVTNW
        MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVD AKIEAVTNW
Subjt:  MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDLAKIEAVTNW

Query:  TRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYA
        TRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYA
Subjt:  TRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYA

Query:  SRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITK
        SRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITK
Subjt:  SRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITK

Query:  QTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLAEKRRMVETEQGEDFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMH
        QTPLLRDFERAEIAVSVGEVTAQLAQL+VQPTLRQKIIAAQL+DPYLAEKRR+VETEQGE FSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMH
Subjt:  QTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLAEKRRMVETEQGEDFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMH

Query:  PGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQMKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTA
        PGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQ+KAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTA
Subjt:  PGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQMKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTA

Query:  SKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHP
        SKWGQLYMTEIVRLHGVPVSI+SDRDARFTSKFWKGLQ+ALGTRLDFSTAFHP
Subjt:  SKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHP

A0A5D3C6W3 Reverse transcriptase

0.0e+00

98.55

Show/hide

Query:  MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDLAKIEAVTNW
        MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVD AKIEAVTNW
Subjt:  MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDLAKIEAVTNW

Query:  TRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYA
        TRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYA
Subjt:  TRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYA

Query:  SRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITK
        SRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITK
Subjt:  SRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITK

Query:  QTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLAEKRRMVETEQGEDFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMH
        QTPLLRDFERAEIAVSVGEVTAQLAQL+VQPTLRQKIIAAQL+DPYLAEKRR+VETEQGE FSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMH
Subjt:  QTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLAEKRRMVETEQGEDFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMH

Query:  PGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQMKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTA
        PGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQ+KAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTA
Subjt:  PGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQMKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTA

Query:  SKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHP
        SKWGQLYMTEIVRLHGVPVSI+SDRDARFTSKFWKGLQ+ALGTRLDFSTAFHP
Subjt:  SKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHP

A0A5D3DA59 Reverse transcriptase

0.0e+00

98.55

Show/hide

Query:  MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDLAKIEAVTNW
        MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVD AKIEAVTNW
Subjt:  MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDLAKIEAVTNW

Query:  TRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYA
        TRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYA
Subjt:  TRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYA

Query:  SRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITK
        SRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITK
Subjt:  SRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITK

Query:  QTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLAEKRRMVETEQGEDFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMH
        QTPLLRDFERAEIAVSVGEVTAQLAQL+VQPTLRQKIIAAQL+DPYLAEKRR+VETEQGE FSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMH
Subjt:  QTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLAEKRRMVETEQGEDFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMH

Query:  PGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQMKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTA
        PGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQ+KAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTA
Subjt:  PGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQMKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTA

Query:  SKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHP
        SKWGQLYMTEIVRLHGVPVSI+SDRDARFTSKFWKGLQ+ALGTRLDFSTAFHP
Subjt:  SKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHP

SwissProt top hits

e value

%identity

Alignment

P0CT34 Transposon Tf2-1 polyprotein

8.2e-81

31.38

Show/hide

Query:  MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDLAKIEAVTNW
        M +G++ APA F   +N +  +  +S V+ ++DDILI+SK+E+EH +H+  VL+ L+   L    +KCEF   +V F+G+ +S +G +     I+ V  W
Subjt:  MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDLAKIEAVTNW

Query:  TRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGK-----
         +P    E+R FLG   Y R+F+   S++  PL  L +K   + W+P   ++ + +KQ LV+ PVL   D S   ++ +DAS   +G VL Q+       
Subjt:  TRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGK-----

Query:  VVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIYTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKV
         V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR  
Subjt:  VVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIYTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKV

Query:  AHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLAEKRRMVETEQGEDFSISSDDGLMFEGR--LCVPEDSAVKTELL
             ++ +  P+ +D E   I          + Q+S+    + +++    ND  L       +    E+  +   DGL+   +  + +P D+ +   ++
Subjt:  AHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLAEKRRMVETEQGEDFSISSDDGLMFEGR--LCVPEDSAVKTELL

Query:  TEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQMKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSA
         + H     +HPG   +   +   + W+G+++ + ++V  C  CQ  K+    P G LQP+      WES+SMDFIT LP++  GY  ++VVVDR +K A
Subjt:  TEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQMKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSA

Query:  HFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHP
          VP   + TA +  +++   ++   G P  II+D D  FTS+ WK         + FS  + P
Subjt:  HFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHP

P0CT35 Transposon Tf2-2 polyprotein

8.2e-81

31.38

Show/hide

Query:  MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDLAKIEAVTNW
        M +G++ APA F   +N +  +  +S V+ ++DDILI+SK+E+EH +H+  VL+ L+   L    +KCEF   +V F+G+ +S +G +     I+ V  W
Subjt:  MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDLAKIEAVTNW

Query:  TRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGK-----
         +P    E+R FLG   Y R+F+   S++  PL  L +K   + W+P   ++ + +KQ LV+ PVL   D S   ++ +DAS   +G VL Q+       
Subjt:  TRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGK-----

Query:  VVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIYTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKV
         V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR  
Subjt:  VVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIYTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKV

Query:  AHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLAEKRRMVETEQGEDFSISSDDGLMFEGR--LCVPEDSAVKTELL
             ++ +  P+ +D E   I          + Q+S+    + +++    ND  L       +    E+  +   DGL+   +  + +P D+ +   ++
Subjt:  AHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLAEKRRMVETEQGEDFSISSDDGLMFEGR--LCVPEDSAVKTELL

Query:  TEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQMKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSA
         + H     +HPG   +   +   + W+G+++ + ++V  C  CQ  K+    P G LQP+      WES+SMDFIT LP++  GY  ++VVVDR +K A
Subjt:  TEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQMKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSA

Query:  HFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHP
          VP   + TA +  +++   ++   G P  II+D D  FTS+ WK         + FS  + P
Subjt:  HFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHP

P0CT36 Transposon Tf2-3 polyprotein

8.2e-81

31.38

Show/hide

Query:  MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDLAKIEAVTNW
        M +G++ APA F   +N +  +  +S V+ ++DDILI+SK+E+EH +H+  VL+ L+   L    +KCEF   +V F+G+ +S +G +     I+ V  W
Subjt:  MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDLAKIEAVTNW

Query:  TRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGK-----
         +P    E+R FLG   Y R+F+   S++  PL  L +K   + W+P   ++ + +KQ LV+ PVL   D S   ++ +DAS   +G VL Q+       
Subjt:  TRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGK-----

Query:  VVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIYTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKV
         V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR  
Subjt:  VVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIYTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKV

Query:  AHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLAEKRRMVETEQGEDFSISSDDGLMFEGR--LCVPEDSAVKTELL
             ++ +  P+ +D E   I          + Q+S+    + +++    ND  L       +    E+  +   DGL+   +  + +P D+ +   ++
Subjt:  AHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLAEKRRMVETEQGEDFSISSDDGLMFEGR--LCVPEDSAVKTELL

Query:  TEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQMKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSA
         + H     +HPG   +   +   + W+G+++ + ++V  C  CQ  K+    P G LQP+      WES+SMDFIT LP++  GY  ++VVVDR +K A
Subjt:  TEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQMKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSA

Query:  HFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHP
          VP   + TA +  +++   ++   G P  II+D D  FTS+ WK         + FS  + P
Subjt:  HFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHP

P0CT37 Transposon Tf2-4 polyprotein

8.2e-81

31.38

Show/hide

Query:  MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDLAKIEAVTNW
        M +G++ APA F   +N +  +  +S V+ ++DDILI+SK+E+EH +H+  VL+ L+   L    +KCEF   +V F+G+ +S +G +     I+ V  W
Subjt:  MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDLAKIEAVTNW

Query:  TRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGK-----
         +P    E+R FLG   Y R+F+   S++  PL  L +K   + W+P   ++ + +KQ LV+ PVL   D S   ++ +DAS   +G VL Q+       
Subjt:  TRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGK-----

Query:  VVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIYTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKV
         V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR  
Subjt:  VVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIYTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKV

Query:  AHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLAEKRRMVETEQGEDFSISSDDGLMFEGR--LCVPEDSAVKTELL
             ++ +  P+ +D E   I          + Q+S+    + +++    ND  L       +    E+  +   DGL+   +  + +P D+ +   ++
Subjt:  AHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLAEKRRMVETEQGEDFSISSDDGLMFEGR--LCVPEDSAVKTELL

Query:  TEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQMKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSA
         + H     +HPG   +   +   + W+G+++ + ++V  C  CQ  K+    P G LQP+      WES+SMDFIT LP++  GY  ++VVVDR +K A
Subjt:  TEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQMKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSA

Query:  HFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHP
          VP   + TA +  +++   ++   G P  II+D D  FTS+ WK         + FS  + P
Subjt:  HFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHP

P0CT41 Transposon Tf2-12 polyprotein

8.2e-81

31.38

Show/hide

Query:  MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDLAKIEAVTNW
        M +G++ APA F   +N +  +  +S V+ ++DDILI+SK+E+EH +H+  VL+ L+   L    +KCEF   +V F+G+ +S +G +     I+ V  W
Subjt:  MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDLAKIEAVTNW

Query:  TRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGK-----
         +P    E+R FLG   Y R+F+   S++  PL  L +K   + W+P   ++ + +KQ LV+ PVL   D S   ++ +DAS   +G VL Q+       
Subjt:  TRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGK-----

Query:  VVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIYTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKV
         V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR  
Subjt:  VVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIYTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKV

Query:  AHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLAEKRRMVETEQGEDFSISSDDGLMFEGR--LCVPEDSAVKTELL
             ++ +  P+ +D E   I          + Q+S+    + +++    ND  L       +    E+  +   DGL+   +  + +P D+ +   ++
Subjt:  AHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLAEKRRMVETEQGEDFSISSDDGLMFEGR--LCVPEDSAVKTELL

Query:  TEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQMKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSA
         + H     +HPG   +   +   + W+G+++ + ++V  C  CQ  K+    P G LQP+      WES+SMDFIT LP++  GY  ++VVVDR +K A
Subjt:  TEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQMKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSA

Query:  HFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHP
          VP   + TA +  +++   ++   G P  II+D D  FTS+ WK         + FS  + P
Subjt:  HFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHP

Arabidopsis top hits

e value

%identity

Alignment

ATMG00860.1 DNA/RNA polymerases superfamily protein

1.5e-24

42.4

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Query:  HLHQVLETLRANKLYAKFSKCEFWLRKVTFLG--HVVSSEGVSVDLAKIEAVTNWTRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVW
        HL  VL+    ++ YA   KC F   ++ +LG  H++S EGVS D AK+EA+  W  P   +E+R FLGL GYYRRFV+++ +I  PLT+L +K +   W
Subjt:  HLHQVLETLRANKLYAKFSKCEFWLRKVTFLG--HVVSSEGVSVDLAKIEAVTNWTRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVW

Query:  SPACERSFQELKQKLVTAPVLTVPD
        +     +F+ LK  + T PVL +PD
Subjt:  SPACERSFQELKQKLVTAPVLTVPD

Sequences

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CDS sequence

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ATGTCTTTCGGCTTGACTAACGCTCCTGCAGTATTCATGGATTTGATGAACAGGGTGTTTAAGGACTTTCTAGACTCGTTCGTCATAGTCTTCATTGACGACATC
CTCATTTACTCAAAAACTGAGGCGGAGCACGAGGAGCACTTACACCAGGTTTTGGAGACCCTTCGAGCCAACAAGTTGTATGCCAAGTTCTCCAAGTGTGAATTC
TGGTTAAGGAAGGTGACGTTTCTTGGCCACGTGGTTTCCAGTGAGGGAGTTTCAGTAGATCTCGCAAAGATTGAAGCGGTGACCAACTGGACTCGACCGTCCACG
GTTAGTGAAATTCGAAGTTTTCTGGGCTTGGCAGGTTACTACAGGAGGTTCGTGGAAGACTTCTCACGTATAGCCAGCCCGTTGACCCAGTTGACCAGGAAGGGA
ACCCCTTTTGTCTGGAGCCCAGCTTGCGAGCGTAGCTTTCAGGAGCTCAAACAGAAGCTAGTGACTGCACCAGTCCTGACAGTGCCCGATGGTTCGGGAAACTTT
GTGATCTATAGTGATGCCTCCAAGAAGGGACTGGGCTGTGTCCTGATGCAGCAAGGTAAGGTAGTTGCTTATGCCTCCCGCCAGTTGAAGATTCATGAGCAGAAC
TACCCTACCCACGACTTGGAGTTGGCAGCTGTAGTCTTTGCACTGAAGATATGGAGGCACTATCTGTACGGTGAGAAGATTCAGATTTACACCGACCATAAGAGC
CTGAAGTACTTCTTCACTCAGAAGGAGTTGAACATGAGGCAGAGGAGGTGGCTCGAGTTGGTGAAAGACTACGACTGCGAGATCCTGTACCACCCAGGTAAAGCA
AATGTAGTGGCTGACGCGCTGAGTAGGAAGGTTGCACATTCAGCAGCGCTAATCACCAAGCAGACCCCCTTACTCAGGGATTTTGAGAGAGCCGAGATTGCAGTC
TCAGTAGGTGAGGTTACCGCACAGTTGGCTCAGTTGTCGGTTCAGCCAACCTTGAGGCAAAAGATCATCGCTGCTCAGCTGAATGATCCTTACTTGGCAGAGAAA
CGTCGTATGGTAGAGACAGAGCAAGGTGAAGACTTCTCCATATCCTCTGACGATGGCCTTATGTTTGAGGGACGCCTGTGTGTGCCGGAAGACAGCGCAGTGAAG
ACGGAGCTTTTGACCGAGGCTCACAGTTCCCCGTTTACCATGCACCCTGGAAGTACGAAGATGTACCAGGACTTAAGGAGTGTCTATTGGTGGAGGGGCATGAAG
AGGGATGTGGCAGACTTTGTCAGTAGATGCTTGGTGTGCCAGCAGATGAAGGCACCTAGGCAGCATCCAGCAGGGTTGCTGCAACCCCTGAGTGTGCCAGGGTGG
AAGTGGGAGAGTGTGTCGATGGATTTTATTACGGGACTGCCCAAGACCCTAAAGGGCTACACGGTGATCTGGGTTGTGGTCGACAGACTCACGAAGTCGGCCCAT
TTCGTGCCAGGGAAGTCCACTTACACTGCCAGTAAGTGGGGGCAGTTATATATGACAGAGATTGTGAGACTACATGGAGTACCCGTATCCATCATTTCAGACAGA
GACGCTCGTTTCACATCGAAGTTCTGGAAGGGACTTCAACTTGCATTAGGTACGAGGCTGGACTTCAGCACGGCATTTCACCCCTAG

mRNA sequence

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Protein sequence

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MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDLAKIEAVTNWTRPST
VSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQN
YPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAV
SVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLAEKRRMVETEQGEDFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMK
RDVADFVSRCLVCQQMKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDR
DARFTSKFWKGLQLALGTRLDFSTAFHP

Cmc10g0281401 (gene) of Melon (Charmono) v1.1 genome