CuGenDBv2

Gene ID	Cmc10g0281471
Organism	Cucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Genome location	CMiso1.1chr10:20060911..20061831
RNA-Seq Expression	Cmc10g0281471
Synteny	Cmc10g0281471
Gene Ontology terms	GO:0015074 - DNA integration (biological process) GO:0003676 - nucleic acid binding (molecular function)
InterPro domains	IPR001584 - Integrase, catalytic core IPR012337 - Ribonuclease H-like superfamily IPR036397 - Ribonuclease H superfamily IPR041588 - Integrase zinc-binding domain

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0050493.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]

8.6e-170

94.12

Show/hide

Query:  MHPGSTKMYRTLKKTYWWSGMKQEIVEYVDRCLICQQVKPVRQRPEGFLNPLPLPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRLTKTARFIPIKATS
        MHPGSTKMYRTLKKTYWWSGMKQEI EYVDRCLICQQVKPVRQRP GFLNPLP+PEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRLTKT RFIPIK TS
Subjt:  MHPGSTKMYRTLKKTYWWSGMKQEIVEYVDRCLICQQVKPVRQRPEGFLNPLPLPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRLTKTARFIPIKATS

Query:  TLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKTMVTGLKFSTSFHPQTDGQFERTIQTLEDMLRACVLQLKGSWDTHLPLMEFAYNNNYQP
        TLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQK M TGLKFSTSFHPQTDGQ ERTIQTLEDMLRACVLQLKGSWDTHLPLMEFAYNNNYQ 
Subjt:  TLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKTMVTGLKFSTSFHPQTDGQFERTIQTLEDMLRACVLQLKGSWDTHLPLMEFAYNNNYQP

Query:  SIGMTPYEALYGRPCRTPVCWNEVGEQKLVGPKLVQIRTNNIKLIRENLRIAQDRQKSYADKRRRNLEFKVGDQVFLKLSPWRGVIHFGRKGKLSPRYIR
        SIGM PYEALYGRPCRTPVCWNEVGE+KLVGP+LVQI TNNIKLIRENLR AQDRQKSYADKRRRNLEF+VGDQVFLKLSPWRGVI FGRKGKLSPRYI 
Subjt:  SIGMTPYEALYGRPCRTPVCWNEVGEQKLVGPKLVQIRTNNIKLIRENLRIAQDRQKSYADKRRRNLEFKVGDQVFLKLSPWRGVIHFGRKGKLSPRYIR

Query:  PYQIME
        PYQI E
Subjt:  PYQIME

KAA0050527.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]

8.6e-170

94.12

Show/hide

Query:  MHPGSTKMYRTLKKTYWWSGMKQEIVEYVDRCLICQQVKPVRQRPEGFLNPLPLPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRLTKTARFIPIKATS
        MHPGSTKMYRTLKKTYWWSGMKQEI EYVDRCLICQQVKPVRQRP GFLNPLP+PEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRLTKT RFIPIK TS
Subjt:  MHPGSTKMYRTLKKTYWWSGMKQEIVEYVDRCLICQQVKPVRQRPEGFLNPLPLPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRLTKTARFIPIKATS

Query:  TLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKTMVTGLKFSTSFHPQTDGQFERTIQTLEDMLRACVLQLKGSWDTHLPLMEFAYNNNYQP
        TLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQK M TGLKFSTSFHPQTDGQ ERTIQTLEDMLRACVLQLKGSWDTHLPLMEFAYNNNYQ 
Subjt:  TLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKTMVTGLKFSTSFHPQTDGQFERTIQTLEDMLRACVLQLKGSWDTHLPLMEFAYNNNYQP

Query:  SIGMTPYEALYGRPCRTPVCWNEVGEQKLVGPKLVQIRTNNIKLIRENLRIAQDRQKSYADKRRRNLEFKVGDQVFLKLSPWRGVIHFGRKGKLSPRYIR
        SIGM PYEALYGRPCRTPVCWNEVGE+KLVGP+LVQI TNNIKLIRENLR AQDRQKSYADKRRRNLEF+VGDQVFLKLSPWRGVI FGRKGKLSPRYI 
Subjt:  SIGMTPYEALYGRPCRTPVCWNEVGEQKLVGPKLVQIRTNNIKLIRENLRIAQDRQKSYADKRRRNLEFKVGDQVFLKLSPWRGVIHFGRKGKLSPRYIR

Query:  PYQIME
        PYQI E
Subjt:  PYQIME

KAA0053246.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]

8.6e-170

94.12

Show/hide

Query:  MHPGSTKMYRTLKKTYWWSGMKQEIVEYVDRCLICQQVKPVRQRPEGFLNPLPLPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRLTKTARFIPIKATS
        MHPGSTKMYRTLKKTYWWSGMKQEI EYVDRCLICQQVKPVRQRP GFLNPLP+PEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRLTKT RFIPIK TS
Subjt:  MHPGSTKMYRTLKKTYWWSGMKQEIVEYVDRCLICQQVKPVRQRPEGFLNPLPLPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRLTKTARFIPIKATS

Query:  TLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKTMVTGLKFSTSFHPQTDGQFERTIQTLEDMLRACVLQLKGSWDTHLPLMEFAYNNNYQP
        TLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQK M TGLKFSTSFHPQTDGQ ERTIQTLEDMLRACVLQLKGSWDTHLPLMEFAYNNNYQ 
Subjt:  TLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKTMVTGLKFSTSFHPQTDGQFERTIQTLEDMLRACVLQLKGSWDTHLPLMEFAYNNNYQP

Query:  SIGMTPYEALYGRPCRTPVCWNEVGEQKLVGPKLVQIRTNNIKLIRENLRIAQDRQKSYADKRRRNLEFKVGDQVFLKLSPWRGVIHFGRKGKLSPRYIR
        SIGM PYEALYGRPCRTPVCWNEVGE+KLVGP+LVQI TNNIKLIRENLR AQDRQKSYADKRRRNLEF+VGDQVFLKLSPWRGVI FGRKGKLSPRYI 
Subjt:  SIGMTPYEALYGRPCRTPVCWNEVGEQKLVGPKLVQIRTNNIKLIRENLRIAQDRQKSYADKRRRNLEFKVGDQVFLKLSPWRGVIHFGRKGKLSPRYIR

Query:  PYQIME
        PYQI E
Subjt:  PYQIME

KAA0059912.1 reverse transcriptase [Cucumis melo var. makuwa]

8.6e-170

94.12

Show/hide

Query:  MHPGSTKMYRTLKKTYWWSGMKQEIVEYVDRCLICQQVKPVRQRPEGFLNPLPLPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRLTKTARFIPIKATS
        MHPGSTKMYRTLKKTYWWSGMKQEI EYVDRCLICQQVKPVRQRP GFLNPLP+PEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRLTKT RFIPIK TS
Subjt:  MHPGSTKMYRTLKKTYWWSGMKQEIVEYVDRCLICQQVKPVRQRPEGFLNPLPLPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRLTKTARFIPIKATS

Query:  TLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKTMVTGLKFSTSFHPQTDGQFERTIQTLEDMLRACVLQLKGSWDTHLPLMEFAYNNNYQP
        TLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQK M TGLKFSTSFHPQTDGQ ERTIQTLEDMLRACVLQLKGSWDTHLPLMEFAYNNNYQ 
Subjt:  TLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKTMVTGLKFSTSFHPQTDGQFERTIQTLEDMLRACVLQLKGSWDTHLPLMEFAYNNNYQP

Query:  SIGMTPYEALYGRPCRTPVCWNEVGEQKLVGPKLVQIRTNNIKLIRENLRIAQDRQKSYADKRRRNLEFKVGDQVFLKLSPWRGVIHFGRKGKLSPRYIR
        SIGM PYEALYGRPCRTPVCWNEVGE+KLVGP+LVQI TNNIKLIRENLR AQDRQKSYADKRRRNLEF+VGDQVFLKLSPWRGVI FGRKGKLSPRYI 
Subjt:  SIGMTPYEALYGRPCRTPVCWNEVGEQKLVGPKLVQIRTNNIKLIRENLRIAQDRQKSYADKRRRNLEFKVGDQVFLKLSPWRGVIHFGRKGKLSPRYIR

Query:  PYQIME
        PYQI E
Subjt:  PYQIME

KAA0066849.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]

8.6e-170

94.12

Show/hide

Query:  MHPGSTKMYRTLKKTYWWSGMKQEIVEYVDRCLICQQVKPVRQRPEGFLNPLPLPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRLTKTARFIPIKATS
        MHPGSTKMYRTLKKTYWWSGMKQEI EYVDRCLICQQVKPVRQRP GFLNPLP+PEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRLTKT RFIPIK TS
Subjt:  MHPGSTKMYRTLKKTYWWSGMKQEIVEYVDRCLICQQVKPVRQRPEGFLNPLPLPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRLTKTARFIPIKATS

Query:  TLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKTMVTGLKFSTSFHPQTDGQFERTIQTLEDMLRACVLQLKGSWDTHLPLMEFAYNNNYQP
        TLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQK M TGLKFSTSFHPQTDGQ ERTIQTLEDMLRACVLQLKGSWDTHLPLMEFAYNNNYQ 
Subjt:  TLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKTMVTGLKFSTSFHPQTDGQFERTIQTLEDMLRACVLQLKGSWDTHLPLMEFAYNNNYQP

Query:  SIGMTPYEALYGRPCRTPVCWNEVGEQKLVGPKLVQIRTNNIKLIRENLRIAQDRQKSYADKRRRNLEFKVGDQVFLKLSPWRGVIHFGRKGKLSPRYIR
        SIGM PYEALYGRPCRTPVCWNEVGE+KLVGP+LVQI TNNIKLIRENLR AQDRQKSYADKRRRNLEF+VGDQVFLKLSPWRGVI FGRKGKLSPRYI 
Subjt:  SIGMTPYEALYGRPCRTPVCWNEVGEQKLVGPKLVQIRTNNIKLIRENLRIAQDRQKSYADKRRRNLEFKVGDQVFLKLSPWRGVIHFGRKGKLSPRYIR

Query:  PYQIME
        PYQI E
Subjt:  PYQIME

TrEMBL top hits

e value

%identity

Alignment

A0A5A7T1Y5 Reverse transcriptase

4.2e-170

94.12

Show/hide

Query:  MHPGSTKMYRTLKKTYWWSGMKQEIVEYVDRCLICQQVKPVRQRPEGFLNPLPLPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRLTKTARFIPIKATS
        MHPGSTKMYRTLKKTYWWSGMKQEI EYVDRCLICQQVKPVRQRP GFLNPLP+PEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRLTKT RFIPIK TS
Subjt:  MHPGSTKMYRTLKKTYWWSGMKQEIVEYVDRCLICQQVKPVRQRPEGFLNPLPLPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRLTKTARFIPIKATS

Query:  TLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKTMVTGLKFSTSFHPQTDGQFERTIQTLEDMLRACVLQLKGSWDTHLPLMEFAYNNNYQP
        TLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQK M TGLKFSTSFHPQTDGQ ERTIQTLEDMLRACVLQLKGSWDTHLPLMEFAYNNNYQ 
Subjt:  TLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKTMVTGLKFSTSFHPQTDGQFERTIQTLEDMLRACVLQLKGSWDTHLPLMEFAYNNNYQP

Query:  SIGMTPYEALYGRPCRTPVCWNEVGEQKLVGPKLVQIRTNNIKLIRENLRIAQDRQKSYADKRRRNLEFKVGDQVFLKLSPWRGVIHFGRKGKLSPRYIR
        SIGM PYEALYGRPCRTPVCWNEVGE+KLVGP+LVQI TNNIKLIRENLR AQDRQKSYADKRRRNLEF+VGDQVFLKLSPWRGVI FGRKGKLSPRYI 
Subjt:  SIGMTPYEALYGRPCRTPVCWNEVGEQKLVGPKLVQIRTNNIKLIRENLRIAQDRQKSYADKRRRNLEFKVGDQVFLKLSPWRGVIHFGRKGKLSPRYIR

Query:  PYQIME
        PYQI E
Subjt:  PYQIME

A0A5A7U2V7 Reverse transcriptase

4.2e-170

94.12

Show/hide

Query:  MHPGSTKMYRTLKKTYWWSGMKQEIVEYVDRCLICQQVKPVRQRPEGFLNPLPLPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRLTKTARFIPIKATS
        MHPGSTKMYRTLKKTYWWSGMKQEI EYVDRCLICQQVKPVRQRP GFLNPLP+PEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRLTKT RFIPIK TS
Subjt:  MHPGSTKMYRTLKKTYWWSGMKQEIVEYVDRCLICQQVKPVRQRPEGFLNPLPLPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRLTKTARFIPIKATS

Query:  TLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKTMVTGLKFSTSFHPQTDGQFERTIQTLEDMLRACVLQLKGSWDTHLPLMEFAYNNNYQP
        TLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQK M TGLKFSTSFHPQTDGQ ERTIQTLEDMLRACVLQLKGSWDTHLPLMEFAYNNNYQ 
Subjt:  TLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKTMVTGLKFSTSFHPQTDGQFERTIQTLEDMLRACVLQLKGSWDTHLPLMEFAYNNNYQP

Query:  SIGMTPYEALYGRPCRTPVCWNEVGEQKLVGPKLVQIRTNNIKLIRENLRIAQDRQKSYADKRRRNLEFKVGDQVFLKLSPWRGVIHFGRKGKLSPRYIR
        SIGM PYEALYGRPCRTPVCWNEVGE+KLVGP+LVQI TNNIKLIRENLR AQDRQKSYADKRRRNLEF+VGDQVFLKLSPWRGVI FGRKGKLSPRYI 
Subjt:  SIGMTPYEALYGRPCRTPVCWNEVGEQKLVGPKLVQIRTNNIKLIRENLRIAQDRQKSYADKRRRNLEFKVGDQVFLKLSPWRGVIHFGRKGKLSPRYIR

Query:  PYQIME
        PYQI E
Subjt:  PYQIME

A0A5A7UUL6 Reverse transcriptase

4.2e-170

94.12

Show/hide

Query:  MHPGSTKMYRTLKKTYWWSGMKQEIVEYVDRCLICQQVKPVRQRPEGFLNPLPLPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRLTKTARFIPIKATS
        MHPGSTKMYRTLKKTYWWSGMKQEI EYVDRCLICQQVKPVRQRP GFLNPLP+PEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRLTKT RFIPIK TS
Subjt:  MHPGSTKMYRTLKKTYWWSGMKQEIVEYVDRCLICQQVKPVRQRPEGFLNPLPLPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRLTKTARFIPIKATS

Query:  TLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKTMVTGLKFSTSFHPQTDGQFERTIQTLEDMLRACVLQLKGSWDTHLPLMEFAYNNNYQP
        TLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQK M TGLKFSTSFHPQTDGQ ERTIQTLEDMLRACVLQLKGSWDTHLPLMEFAYNNNYQ 
Subjt:  TLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKTMVTGLKFSTSFHPQTDGQFERTIQTLEDMLRACVLQLKGSWDTHLPLMEFAYNNNYQP

Query:  SIGMTPYEALYGRPCRTPVCWNEVGEQKLVGPKLVQIRTNNIKLIRENLRIAQDRQKSYADKRRRNLEFKVGDQVFLKLSPWRGVIHFGRKGKLSPRYIR
        SIGM PYEALYGRPCRTPVCWNEVGE+KLVGP+LVQI TNNIKLIRENLR AQDRQKSYADKRRRNLEF+VGDQVFLKLSPWRGVI FGRKGKLSPRYI 
Subjt:  SIGMTPYEALYGRPCRTPVCWNEVGEQKLVGPKLVQIRTNNIKLIRENLRIAQDRQKSYADKRRRNLEFKVGDQVFLKLSPWRGVIHFGRKGKLSPRYIR

Query:  PYQIME
        PYQI E
Subjt:  PYQIME

A0A5D3BHI1 Reverse transcriptase

4.2e-170

94.12

Show/hide

Query:  MHPGSTKMYRTLKKTYWWSGMKQEIVEYVDRCLICQQVKPVRQRPEGFLNPLPLPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRLTKTARFIPIKATS
        MHPGSTKMYRTLKKTYWWSGMKQEI EYVDRCLICQQVKPVRQRP GFLNPLP+PEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRLTKT RFIPIK TS
Subjt:  MHPGSTKMYRTLKKTYWWSGMKQEIVEYVDRCLICQQVKPVRQRPEGFLNPLPLPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRLTKTARFIPIKATS

Query:  TLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKTMVTGLKFSTSFHPQTDGQFERTIQTLEDMLRACVLQLKGSWDTHLPLMEFAYNNNYQP
        TLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQK M TGLKFSTSFHPQTDGQ ERTIQTLEDMLRACVLQLKGSWDTHLPLMEFAYNNNYQ 
Subjt:  TLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKTMVTGLKFSTSFHPQTDGQFERTIQTLEDMLRACVLQLKGSWDTHLPLMEFAYNNNYQP

Query:  SIGMTPYEALYGRPCRTPVCWNEVGEQKLVGPKLVQIRTNNIKLIRENLRIAQDRQKSYADKRRRNLEFKVGDQVFLKLSPWRGVIHFGRKGKLSPRYIR
        SIGM PYEALYGRPCRTPVCWNEVGE+KLVGP+LVQI TNNIKLIRENLR AQDRQKSYADKRRRNLEF+VGDQVFLKLSPWRGVI FGRKGKLSPRYI 
Subjt:  SIGMTPYEALYGRPCRTPVCWNEVGEQKLVGPKLVQIRTNNIKLIRENLRIAQDRQKSYADKRRRNLEFKVGDQVFLKLSPWRGVIHFGRKGKLSPRYIR

Query:  PYQIME
        PYQI E
Subjt:  PYQIME

A0A5D3BS67 Reverse transcriptase

4.2e-170

94.12

Show/hide

Query:  MHPGSTKMYRTLKKTYWWSGMKQEIVEYVDRCLICQQVKPVRQRPEGFLNPLPLPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRLTKTARFIPIKATS
        MHPGSTKMYRTLKKTYWWSGMKQEI EYVDRCLICQQVKPVRQRP GFLNPLP+PEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRLTKT RFIPIK TS
Subjt:  MHPGSTKMYRTLKKTYWWSGMKQEIVEYVDRCLICQQVKPVRQRPEGFLNPLPLPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRLTKTARFIPIKATS

Query:  TLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKTMVTGLKFSTSFHPQTDGQFERTIQTLEDMLRACVLQLKGSWDTHLPLMEFAYNNNYQP
        TLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQK M TGLKFSTSFHPQTDGQ ERTIQTLEDMLRACVLQLKGSWDTHLPLMEFAYNNNYQ 
Subjt:  TLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKTMVTGLKFSTSFHPQTDGQFERTIQTLEDMLRACVLQLKGSWDTHLPLMEFAYNNNYQP

Query:  SIGMTPYEALYGRPCRTPVCWNEVGEQKLVGPKLVQIRTNNIKLIRENLRIAQDRQKSYADKRRRNLEFKVGDQVFLKLSPWRGVIHFGRKGKLSPRYIR
        SIGM PYEALYGRPCRTPVCWNEVGE+KLVGP+LVQI TNNIKLIRENLR AQDRQKSYADKRRRNLEF+VGDQVFLKLSPWRGVI FGRKGKLSPRYI 
Subjt:  SIGMTPYEALYGRPCRTPVCWNEVGEQKLVGPKLVQIRTNNIKLIRENLRIAQDRQKSYADKRRRNLEFKVGDQVFLKLSPWRGVIHFGRKGKLSPRYIR

Query:  PYQIME
        PYQI E
Subjt:  PYQIME

SwissProt top hits

e value

%identity

Alignment

P0CT34 Transposon Tf2-1 polyprotein

1.7e-43

31.09

Show/hide

Query:  MHPGSTKMYRTLKKTYWWSGMKQEIVEYVDRCLICQQVKPVRQRPEGFLNPLPLPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRLTKTARFIPIKATS
        +HPG   +   + + + W G++++I EYV  C  CQ  K    +P G L P+P  E  WE ++MDF+  LP  SSG++ ++V+VDR +K A  +P   + 
Subjt:  MHPGSTKMYRTLKKTYWWSGMKQEIVEYVDRCLICQQVKPVRQRPEGFLNPLPLPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRLTKTARFIPIKATS

Query:  TLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKTMVTGLKFSTSFHPQTDGQFERTIQTLEDMLRACVLQLKGSWDTHLPLMEFAYNNNYQP
        T +Q AR++  ++++ +G P  I++D D  FTS+ W          +KFS  + PQTDGQ ERT QT+E +LR        +W  H+ L++ +YNN    
Subjt:  TLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKTMVTGLKFSTSFHPQTDGQFERTIQTLEDMLRACVLQLKGSWDTHLPLMEFAYNNNYQP

Query:  SIGMTPYEALYG-----RPCRTPVCWNEVGEQKLVGPKLVQIRTNNIKLIRENLRIAQDRQKSYADKRRRNL-EFKVGDQVFLKLSPWRGVIHFGRKGKL
        +  MTP+E ++       P   P   ++  E      + +Q+     + ++E+L     + K Y D + + + EF+ GD V +K +   G +H  +  KL
Subjt:  SIGMTPYEALYG-----RPCRTPVCWNEVGEQKLVGPKLVQIRTNNIKLIRENLRIAQDRQKSYADKRRRNL-EFKVGDQVFLKLSPWRGVIHFGRKGKL

Query:  SPRYIRPYQIME
        +P +  P+ +++
Subjt:  SPRYIRPYQIME

P0CT35 Transposon Tf2-2 polyprotein

1.7e-43

31.09

Show/hide

Query:  MHPGSTKMYRTLKKTYWWSGMKQEIVEYVDRCLICQQVKPVRQRPEGFLNPLPLPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRLTKTARFIPIKATS
        +HPG   +   + + + W G++++I EYV  C  CQ  K    +P G L P+P  E  WE ++MDF+  LP  SSG++ ++V+VDR +K A  +P   + 
Subjt:  MHPGSTKMYRTLKKTYWWSGMKQEIVEYVDRCLICQQVKPVRQRPEGFLNPLPLPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRLTKTARFIPIKATS

Query:  TLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKTMVTGLKFSTSFHPQTDGQFERTIQTLEDMLRACVLQLKGSWDTHLPLMEFAYNNNYQP
        T +Q AR++  ++++ +G P  I++D D  FTS+ W          +KFS  + PQTDGQ ERT QT+E +LR        +W  H+ L++ +YNN    
Subjt:  TLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKTMVTGLKFSTSFHPQTDGQFERTIQTLEDMLRACVLQLKGSWDTHLPLMEFAYNNNYQP

Query:  SIGMTPYEALYG-----RPCRTPVCWNEVGEQKLVGPKLVQIRTNNIKLIRENLRIAQDRQKSYADKRRRNL-EFKVGDQVFLKLSPWRGVIHFGRKGKL
        +  MTP+E ++       P   P   ++  E      + +Q+     + ++E+L     + K Y D + + + EF+ GD V +K +   G +H  +  KL
Subjt:  SIGMTPYEALYG-----RPCRTPVCWNEVGEQKLVGPKLVQIRTNNIKLIRENLRIAQDRQKSYADKRRRNL-EFKVGDQVFLKLSPWRGVIHFGRKGKL

Query:  SPRYIRPYQIME
        +P +  P+ +++
Subjt:  SPRYIRPYQIME

P0CT36 Transposon Tf2-3 polyprotein

1.7e-43

31.09

Show/hide

Query:  MHPGSTKMYRTLKKTYWWSGMKQEIVEYVDRCLICQQVKPVRQRPEGFLNPLPLPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRLTKTARFIPIKATS
        +HPG   +   + + + W G++++I EYV  C  CQ  K    +P G L P+P  E  WE ++MDF+  LP  SSG++ ++V+VDR +K A  +P   + 
Subjt:  MHPGSTKMYRTLKKTYWWSGMKQEIVEYVDRCLICQQVKPVRQRPEGFLNPLPLPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRLTKTARFIPIKATS

Query:  TLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKTMVTGLKFSTSFHPQTDGQFERTIQTLEDMLRACVLQLKGSWDTHLPLMEFAYNNNYQP
        T +Q AR++  ++++ +G P  I++D D  FTS+ W          +KFS  + PQTDGQ ERT QT+E +LR        +W  H+ L++ +YNN    
Subjt:  TLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKTMVTGLKFSTSFHPQTDGQFERTIQTLEDMLRACVLQLKGSWDTHLPLMEFAYNNNYQP

Query:  SIGMTPYEALYG-----RPCRTPVCWNEVGEQKLVGPKLVQIRTNNIKLIRENLRIAQDRQKSYADKRRRNL-EFKVGDQVFLKLSPWRGVIHFGRKGKL
        +  MTP+E ++       P   P   ++  E      + +Q+     + ++E+L     + K Y D + + + EF+ GD V +K +   G +H  +  KL
Subjt:  SIGMTPYEALYG-----RPCRTPVCWNEVGEQKLVGPKLVQIRTNNIKLIRENLRIAQDRQKSYADKRRRNL-EFKVGDQVFLKLSPWRGVIHFGRKGKL

Query:  SPRYIRPYQIME
        +P +  P+ +++
Subjt:  SPRYIRPYQIME

P0CT41 Transposon Tf2-12 polyprotein

1.7e-43

31.09

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Query:  MHPGSTKMYRTLKKTYWWSGMKQEIVEYVDRCLICQQVKPVRQRPEGFLNPLPLPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRLTKTARFIPIKATS
        +HPG   +   + + + W G++++I EYV  C  CQ  K    +P G L P+P  E  WE ++MDF+  LP  SSG++ ++V+VDR +K A  +P   + 
Subjt:  MHPGSTKMYRTLKKTYWWSGMKQEIVEYVDRCLICQQVKPVRQRPEGFLNPLPLPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRLTKTARFIPIKATS

Query:  TLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKTMVTGLKFSTSFHPQTDGQFERTIQTLEDMLRACVLQLKGSWDTHLPLMEFAYNNNYQP
        T +Q AR++  ++++ +G P  I++D D  FTS+ W          +KFS  + PQTDGQ ERT QT+E +LR        +W  H+ L++ +YNN    
Subjt:  TLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKTMVTGLKFSTSFHPQTDGQFERTIQTLEDMLRACVLQLKGSWDTHLPLMEFAYNNNYQP

Query:  SIGMTPYEALYG-----RPCRTPVCWNEVGEQKLVGPKLVQIRTNNIKLIRENLRIAQDRQKSYADKRRRNL-EFKVGDQVFLKLSPWRGVIHFGRKGKL
        +  MTP+E ++       P   P   ++  E      + +Q+     + ++E+L     + K Y D + + + EF+ GD V +K +   G +H  +  KL
Subjt:  SIGMTPYEALYG-----RPCRTPVCWNEVGEQKLVGPKLVQIRTNNIKLIRENLRIAQDRQKSYADKRRRNL-EFKVGDQVFLKLSPWRGVIHFGRKGKL

Query:  SPRYIRPYQIME
        +P +  P+ +++
Subjt:  SPRYIRPYQIME

Q9UR07 Transposon Tf2-11 polyprotein

1.7e-43

31.09

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Query:  MHPGSTKMYRTLKKTYWWSGMKQEIVEYVDRCLICQQVKPVRQRPEGFLNPLPLPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRLTKTARFIPIKATS
        +HPG   +   + + + W G++++I EYV  C  CQ  K    +P G L P+P  E  WE ++MDF+  LP  SSG++ ++V+VDR +K A  +P   + 
Subjt:  MHPGSTKMYRTLKKTYWWSGMKQEIVEYVDRCLICQQVKPVRQRPEGFLNPLPLPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRLTKTARFIPIKATS

Query:  TLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKTMVTGLKFSTSFHPQTDGQFERTIQTLEDMLRACVLQLKGSWDTHLPLMEFAYNNNYQP
        T +Q AR++  ++++ +G P  I++D D  FTS+ W          +KFS  + PQTDGQ ERT QT+E +LR        +W  H+ L++ +YNN    
Subjt:  TLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKTMVTGLKFSTSFHPQTDGQFERTIQTLEDMLRACVLQLKGSWDTHLPLMEFAYNNNYQP

Query:  SIGMTPYEALYG-----RPCRTPVCWNEVGEQKLVGPKLVQIRTNNIKLIRENLRIAQDRQKSYADKRRRNL-EFKVGDQVFLKLSPWRGVIHFGRKGKL
        +  MTP+E ++       P   P   ++  E      + +Q+     + ++E+L     + K Y D + + + EF+ GD V +K +   G +H  +  KL
Subjt:  SIGMTPYEALYG-----RPCRTPVCWNEVGEQKLVGPKLVQIRTNNIKLIRENLRIAQDRQKSYADKRRRNL-EFKVGDQVFLKLSPWRGVIHFGRKGKL

Query:  SPRYIRPYQIME
        +P +  P+ +++
Subjt:  SPRYIRPYQIME

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

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CDS sequence

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ATGCATCCAGGTAGCACCAAGATGTATAGAACTTTAAAGAAGACTTATTGGTGGTCTGGAATGAAGCAAGAGATAGTTGAATATGTTGATAGATGTTTGATTTGT
CAACAGGTTAAACCAGTAAGACAGAGGCCAGAAGGATTTCTTAATCCTTTGCCACTGCCAGAGTGGAAATGGGAGCATATTACTATGGATTTTCTATTTGGATTA
CCTCGTACATCCAGTGGACATGATGGTATATGGGTAATAGTAGACAGACTCACCAAGACGGCACGATTTATACCGATTAAAGCGACATCTACATTAGACCAGCTA
GCTAGATTATATGTTGATAAGATTGTGAGTCAGTATGGAGTACCAGTGTCCATAGTTTCAGATAGAGATCCGAGGTTTACTTCTAAATTTTGGCCTAGTTTACAG
AAAACAATGGTAACAGGGCTAAAGTTTAGTACATCATTTCATCCCCAAACAGATGGTCAGTTTGAGAGGACCATCCAAACTTTAGAGGACATGTTGAGAGCATGT
GTCCTTCAACTTAAAGGAAGTTGGGATACCCACTTGCCACTTATGGAGTTTGCTTATAATAATAACTATCAGCCTAGTATCGGTATGACACCATATGAAGCCTTA
TATGGGAGACCATGCAGAACTCCTGTGTGCTGGAATGAAGTGGGAGAGCAGAAGTTAGTAGGTCCTAAGTTGGTTCAGATTAGGACAAACAATATTAAGTTGATC
AGAGAAAATCTGAGGATAGCCCAAGATCGACAGAAAAGTTATGCAGATAAGCGACGAAGAAACCTAGAATTCAAAGTTGGAGATCAAGTTTTCTTGAAATTATCT
CCATGGCGAGGTGTTATTCATTTTGGAAGAAAAGGTAAGTTAAGTCCTAGATATATTAGGCCATATCAGATAATGGAATGA

mRNA sequence

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Protein sequence

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MHPGSTKMYRTLKKTYWWSGMKQEIVEYVDRCLICQQVKPVRQRPEGFLNPLPLPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRLTKTARFIPIKATSTLDQL
ARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKTMVTGLKFSTSFHPQTDGQFERTIQTLEDMLRACVLQLKGSWDTHLPLMEFAYNNNYQPSIGMTPYEAL
YGRPCRTPVCWNEVGEQKLVGPKLVQIRTNNIKLIRENLRIAQDRQKSYADKRRRNLEFKVGDQVFLKLSPWRGVIHFGRKGKLSPRYIRPYQIME

Cmc10g0281471 (gene) of Melon (Charmono) v1.1 genome