CuGenDBv2

Gene ID	Cmc10g0281561
Organism	Cucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Genome location	CMiso1.1chr10:20221077..20222648
RNA-Seq Expression	Cmc10g0281561
Synteny	Cmc10g0281561
Gene Ontology terms	GO:0006278 - RNA-dependent DNA biosynthetic process (biological process) GO:0015074 - DNA integration (biological process) GO:0003676 - nucleic acid binding (molecular function) GO:0003964 - RNA-directed DNA polymerase activity (molecular function) GO:0008270 - zinc ion binding (molecular function)
InterPro domains	IPR000477 - Reverse transcriptase domain IPR012337 - Ribonuclease H-like superfamily IPR036397 - Ribonuclease H superfamily IPR041373 - Reverse transcriptase, RNase H-like domain IPR041588 - Integrase zinc-binding domain IPR043128 - Reverse transcriptase/Diguanylate cyclase domain IPR043502 - DNA/RNA polymerase superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0035455.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]

6.3e-276

92.54

Show/hide

Query:  MPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNW
        MPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNW
Subjt:  MPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNW

Query:  ERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVKFEW--------------------------------------LGLGCVLMQDGNVIAYA
        ERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVKFEW                                      LGLGCVLMQDGNVIAYA
Subjt:  ERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVKFEW--------------------------------------LGLGCVLMQDGNVIAYA

Query:  SRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCG
        SRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCG
Subjt:  SRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCG

Query:  IRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELKNAILEEAHSSAYPM
        IRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELKNAILEEAHSSAY M
Subjt:  IRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELKNAILEEAHSSAYPM

Query:  HPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRLTKTTRFIPIKMTST
        HPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRLTKTTRFIPIKMTST
Subjt:  HPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRLTKTTRFIPIKMTST

Query:  LDQLARLYVDKIVSQYGVPVSIV
        LDQLARLYVDKIVSQYGVPVSIV
Subjt:  LDQLARLYVDKIVSQYGVPVSIV

KAA0050493.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]

6.3e-276

92.54

Show/hide

Query:  MPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNW
        MPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNW
Subjt:  MPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNW

Query:  ERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVKFEW--------------------------------------LGLGCVLMQDGNVIAYA
        ERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVKFEW                                      LGLGCVLMQDGNVIAYA
Subjt:  ERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVKFEW--------------------------------------LGLGCVLMQDGNVIAYA

Query:  SRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCG
        SRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCG
Subjt:  SRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCG

Query:  IRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELKNAILEEAHSSAYPM
        IRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELKNAILEEAHSSAY M
Subjt:  IRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELKNAILEEAHSSAYPM

Query:  HPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRLTKTTRFIPIKMTST
        HPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRLTKTTRFIPIKMTST
Subjt:  HPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRLTKTTRFIPIKMTST

Query:  LDQLARLYVDKIVSQYGVPVSIV
        LDQLARLYVDKIVSQYGVPVSIV
Subjt:  LDQLARLYVDKIVSQYGVPVSIV

KAA0050527.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]

6.3e-276

92.54

Show/hide

Query:  MPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNW
        MPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNW
Subjt:  MPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNW

Query:  ERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVKFEW--------------------------------------LGLGCVLMQDGNVIAYA
        ERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVKFEW                                      LGLGCVLMQDGNVIAYA
Subjt:  ERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVKFEW--------------------------------------LGLGCVLMQDGNVIAYA

Query:  SRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCG
        SRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCG
Subjt:  SRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCG

Query:  IRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELKNAILEEAHSSAYPM
        IRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELKNAILEEAHSSAY M
Subjt:  IRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELKNAILEEAHSSAYPM

Query:  HPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRLTKTTRFIPIKMTST
        HPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRLTKTTRFIPIKMTST
Subjt:  HPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRLTKTTRFIPIKMTST

Query:  LDQLARLYVDKIVSQYGVPVSIV
        LDQLARLYVDKIVSQYGVPVSIV
Subjt:  LDQLARLYVDKIVSQYGVPVSIV

KAA0062270.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]

6.3e-276

92.54

Show/hide

Query:  MPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNW
        MPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNW
Subjt:  MPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNW

Query:  ERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVKFEW--------------------------------------LGLGCVLMQDGNVIAYA
        ERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVKFEW                                      LGLGCVLMQDGNVIAYA
Subjt:  ERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVKFEW--------------------------------------LGLGCVLMQDGNVIAYA

Query:  SRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCG
        SRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCG
Subjt:  SRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCG

Query:  IRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELKNAILEEAHSSAYPM
        IRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELKNAILEEAHSSAY M
Subjt:  IRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELKNAILEEAHSSAYPM

Query:  HPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRLTKTTRFIPIKMTST
        HPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRLTKTTRFIPIKMTST
Subjt:  HPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRLTKTTRFIPIKMTST

Query:  LDQLARLYVDKIVSQYGVPVSIV
        LDQLARLYVDKIVSQYGVPVSIV
Subjt:  LDQLARLYVDKIVSQYGVPVSIV

KAA0066849.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]

6.3e-276

92.54

Show/hide

Query:  MPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNW
        MPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNW
Subjt:  MPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNW

Query:  ERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVKFEW--------------------------------------LGLGCVLMQDGNVIAYA
        ERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVKFEW                                      LGLGCVLMQDGNVIAYA
Subjt:  ERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVKFEW--------------------------------------LGLGCVLMQDGNVIAYA

Query:  SRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCG
        SRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCG
Subjt:  SRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCG

Query:  IRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELKNAILEEAHSSAYPM
        IRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELKNAILEEAHSSAY M
Subjt:  IRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELKNAILEEAHSSAYPM

Query:  HPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRLTKTTRFIPIKMTST
        HPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRLTKTTRFIPIKMTST
Subjt:  HPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRLTKTTRFIPIKMTST

Query:  LDQLARLYVDKIVSQYGVPVSIV
        LDQLARLYVDKIVSQYGVPVSIV
Subjt:  LDQLARLYVDKIVSQYGVPVSIV

TrEMBL top hits

e value

%identity

Alignment

A0A5A7T1Y5 Reverse transcriptase

3.1e-276

92.54

Show/hide

Query:  MPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNW
        MPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNW
Subjt:  MPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNW

Query:  ERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVKFEW--------------------------------------LGLGCVLMQDGNVIAYA
        ERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVKFEW                                      LGLGCVLMQDGNVIAYA
Subjt:  ERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVKFEW--------------------------------------LGLGCVLMQDGNVIAYA

Query:  SRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCG
        SRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCG
Subjt:  SRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCG

Query:  IRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELKNAILEEAHSSAYPM
        IRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELKNAILEEAHSSAY M
Subjt:  IRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELKNAILEEAHSSAYPM

Query:  HPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRLTKTTRFIPIKMTST
        HPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRLTKTTRFIPIKMTST
Subjt:  HPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRLTKTTRFIPIKMTST

Query:  LDQLARLYVDKIVSQYGVPVSIV
        LDQLARLYVDKIVSQYGVPVSIV
Subjt:  LDQLARLYVDKIVSQYGVPVSIV

A0A5A7T3K4 Reverse transcriptase

3.1e-276

92.54

Show/hide

Query:  MPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNW
        MPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNW
Subjt:  MPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNW

Query:  ERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVKFEW--------------------------------------LGLGCVLMQDGNVIAYA
        ERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVKFEW                                      LGLGCVLMQDGNVIAYA
Subjt:  ERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVKFEW--------------------------------------LGLGCVLMQDGNVIAYA

Query:  SRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCG
        SRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCG
Subjt:  SRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCG

Query:  IRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELKNAILEEAHSSAYPM
        IRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELKNAILEEAHSSAY M
Subjt:  IRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELKNAILEEAHSSAYPM

Query:  HPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRLTKTTRFIPIKMTST
        HPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRLTKTTRFIPIKMTST
Subjt:  HPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRLTKTTRFIPIKMTST

Query:  LDQLARLYVDKIVSQYGVPVSIV
        LDQLARLYVDKIVSQYGVPVSIV
Subjt:  LDQLARLYVDKIVSQYGVPVSIV

A0A5A7U2V7 Reverse transcriptase

3.1e-276

92.54

Show/hide

Query:  MPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNW
        MPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNW
Subjt:  MPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNW

Query:  ERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVKFEW--------------------------------------LGLGCVLMQDGNVIAYA
        ERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVKFEW                                      LGLGCVLMQDGNVIAYA
Subjt:  ERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVKFEW--------------------------------------LGLGCVLMQDGNVIAYA

Query:  SRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCG
        SRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCG
Subjt:  SRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCG

Query:  IRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELKNAILEEAHSSAYPM
        IRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELKNAILEEAHSSAY M
Subjt:  IRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELKNAILEEAHSSAYPM

Query:  HPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRLTKTTRFIPIKMTST
        HPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRLTKTTRFIPIKMTST
Subjt:  HPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRLTKTTRFIPIKMTST

Query:  LDQLARLYVDKIVSQYGVPVSIV
        LDQLARLYVDKIVSQYGVPVSIV
Subjt:  LDQLARLYVDKIVSQYGVPVSIV

A0A5A7UUL6 Reverse transcriptase

3.1e-276

92.54

Show/hide

Query:  MPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNW
        MPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNW
Subjt:  MPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNW

Query:  ERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVKFEW--------------------------------------LGLGCVLMQDGNVIAYA
        ERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVKFEW                                      LGLGCVLMQDGNVIAYA
Subjt:  ERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVKFEW--------------------------------------LGLGCVLMQDGNVIAYA

Query:  SRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCG
        SRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCG
Subjt:  SRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCG

Query:  IRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELKNAILEEAHSSAYPM
        IRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELKNAILEEAHSSAY M
Subjt:  IRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELKNAILEEAHSSAYPM

Query:  HPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRLTKTTRFIPIKMTST
        HPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRLTKTTRFIPIKMTST
Subjt:  HPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRLTKTTRFIPIKMTST

Query:  LDQLARLYVDKIVSQYGVPVSIV
        LDQLARLYVDKIVSQYGVPVSIV
Subjt:  LDQLARLYVDKIVSQYGVPVSIV

A0A5D3BHI1 Reverse transcriptase

3.1e-276

92.54

Show/hide

Query:  MPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNW
        MPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNW
Subjt:  MPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNW

Query:  ERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVKFEW--------------------------------------LGLGCVLMQDGNVIAYA
        ERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVKFEW                                      LGLGCVLMQDGNVIAYA
Subjt:  ERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVKFEW--------------------------------------LGLGCVLMQDGNVIAYA

Query:  SRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCG
        SRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCG
Subjt:  SRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCG

Query:  IRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELKNAILEEAHSSAYPM
        IRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELKNAILEEAHSSAY M
Subjt:  IRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELKNAILEEAHSSAYPM

Query:  HPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRLTKTTRFIPIKMTST
        HPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRLTKTTRFIPIKMTST
Subjt:  HPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRLTKTTRFIPIKMTST

Query:  LDQLARLYVDKIVSQYGVPVSIV
        LDQLARLYVDKIVSQYGVPVSIV
Subjt:  LDQLARLYVDKIVSQYGVPVSIV

SwissProt top hits

e value

%identity

Alignment

P0CT34 Transposon Tf2-1 polyprotein

3.1e-68

28.36

Show/hide

Query:  MPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNW
        MP+G++ APA F   +N I     +  V+ ++DDIL++S     H +H++ VLQ L+   L    +KCEF   QV F+G+ +S KG +   + ++ V+ W
Subjt:  MPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNW

Query:  ERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVKFEW--------------------------------------LGLGCVLMQDGN-----
        ++P +  E+R FLG   Y R+FI   S+L  PL  L +K+V+++W                                      + +G VL Q  +     
Subjt:  ERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVKFEW--------------------------------------LGLGCVLMQDGN-----

Query:  VIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFG--EKCHIFTDHKSL--KYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSR--
         + Y S ++ + + NY   D E+ A++ +LK WRHYL    E   I TDH++L  +   + +  N R  RW   ++D++  I Y PG AN +ADALSR  
Subjt:  VIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFG--EKCHIFTDHKSL--KYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSR--

Query:  --KSRLPKSALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELKN
             +PK                     + ++S + + Q  +      ++V   + D+ L        K +E   +L+    I  + ++ +PN ++L  
Subjt:  --KSRLPKSALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELKN

Query:  AILEEAHSSAYPMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRLT
         I+++ H     +HPG   +   + + + W G++++I EYV  C  CQ  K    +P G L P+P  E  WE ++MDF+  LP  SSG++ ++V+VDR +
Subjt:  AILEEAHSSAYPMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRLT

Query:  KTTRFIPIKMTSTLDQLARLYVDKIVSQYGVPVSIV
        K    +P   + T +Q AR++  ++++ +G P  I+
Subjt:  KTTRFIPIKMTSTLDQLARLYVDKIVSQYGVPVSIV

P0CT35 Transposon Tf2-2 polyprotein

3.1e-68

28.36

Show/hide

Query:  MPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNW
        MP+G++ APA F   +N I     +  V+ ++DDIL++S     H +H++ VLQ L+   L    +KCEF   QV F+G+ +S KG +   + ++ V+ W
Subjt:  MPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNW

Query:  ERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVKFEW--------------------------------------LGLGCVLMQDGN-----
        ++P +  E+R FLG   Y R+FI   S+L  PL  L +K+V+++W                                      + +G VL Q  +     
Subjt:  ERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVKFEW--------------------------------------LGLGCVLMQDGN-----

Query:  VIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFG--EKCHIFTDHKSL--KYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSR--
         + Y S ++ + + NY   D E+ A++ +LK WRHYL    E   I TDH++L  +   + +  N R  RW   ++D++  I Y PG AN +ADALSR  
Subjt:  VIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFG--EKCHIFTDHKSL--KYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSR--

Query:  --KSRLPKSALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELKN
             +PK                     + ++S + + Q  +      ++V   + D+ L        K +E   +L+    I  + ++ +PN ++L  
Subjt:  --KSRLPKSALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELKN

Query:  AILEEAHSSAYPMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRLT
         I+++ H     +HPG   +   + + + W G++++I EYV  C  CQ  K    +P G L P+P  E  WE ++MDF+  LP  SSG++ ++V+VDR +
Subjt:  AILEEAHSSAYPMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRLT

Query:  KTTRFIPIKMTSTLDQLARLYVDKIVSQYGVPVSIV
        K    +P   + T +Q AR++  ++++ +G P  I+
Subjt:  KTTRFIPIKMTSTLDQLARLYVDKIVSQYGVPVSIV

P0CT36 Transposon Tf2-3 polyprotein

3.1e-68

28.36

Show/hide

Query:  MPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNW
        MP+G++ APA F   +N I     +  V+ ++DDIL++S     H +H++ VLQ L+   L    +KCEF   QV F+G+ +S KG +   + ++ V+ W
Subjt:  MPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNW

Query:  ERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVKFEW--------------------------------------LGLGCVLMQDGN-----
        ++P +  E+R FLG   Y R+FI   S+L  PL  L +K+V+++W                                      + +G VL Q  +     
Subjt:  ERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVKFEW--------------------------------------LGLGCVLMQDGN-----

Query:  VIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFG--EKCHIFTDHKSL--KYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSR--
         + Y S ++ + + NY   D E+ A++ +LK WRHYL    E   I TDH++L  +   + +  N R  RW   ++D++  I Y PG AN +ADALSR  
Subjt:  VIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFG--EKCHIFTDHKSL--KYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSR--

Query:  --KSRLPKSALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELKN
             +PK                     + ++S + + Q  +      ++V   + D+ L        K +E   +L+    I  + ++ +PN ++L  
Subjt:  --KSRLPKSALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELKN

Query:  AILEEAHSSAYPMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRLT
         I+++ H     +HPG   +   + + + W G++++I EYV  C  CQ  K    +P G L P+P  E  WE ++MDF+  LP  SSG++ ++V+VDR +
Subjt:  AILEEAHSSAYPMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRLT

Query:  KTTRFIPIKMTSTLDQLARLYVDKIVSQYGVPVSIV
        K    +P   + T +Q AR++  ++++ +G P  I+
Subjt:  KTTRFIPIKMTSTLDQLARLYVDKIVSQYGVPVSIV

P0CT37 Transposon Tf2-4 polyprotein

3.1e-68

28.36

Show/hide

Query:  MPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNW
        MP+G++ APA F   +N I     +  V+ ++DDIL++S     H +H++ VLQ L+   L    +KCEF   QV F+G+ +S KG +   + ++ V+ W
Subjt:  MPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNW

Query:  ERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVKFEW--------------------------------------LGLGCVLMQDGN-----
        ++P +  E+R FLG   Y R+FI   S+L  PL  L +K+V+++W                                      + +G VL Q  +     
Subjt:  ERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVKFEW--------------------------------------LGLGCVLMQDGN-----

Query:  VIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFG--EKCHIFTDHKSL--KYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSR--
         + Y S ++ + + NY   D E+ A++ +LK WRHYL    E   I TDH++L  +   + +  N R  RW   ++D++  I Y PG AN +ADALSR  
Subjt:  VIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFG--EKCHIFTDHKSL--KYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSR--

Query:  --KSRLPKSALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELKN
             +PK                     + ++S + + Q  +      ++V   + D+ L        K +E   +L+    I  + ++ +PN ++L  
Subjt:  --KSRLPKSALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELKN

Query:  AILEEAHSSAYPMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRLT
         I+++ H     +HPG   +   + + + W G++++I EYV  C  CQ  K    +P G L P+P  E  WE ++MDF+  LP  SSG++ ++V+VDR +
Subjt:  AILEEAHSSAYPMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRLT

Query:  KTTRFIPIKMTSTLDQLARLYVDKIVSQYGVPVSIV
        K    +P   + T +Q AR++  ++++ +G P  I+
Subjt:  KTTRFIPIKMTSTLDQLARLYVDKIVSQYGVPVSIV

P0CT41 Transposon Tf2-12 polyprotein

3.1e-68

28.36

Show/hide

Query:  MPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNW
        MP+G++ APA F   +N I     +  V+ ++DDIL++S     H +H++ VLQ L+   L    +KCEF   QV F+G+ +S KG +   + ++ V+ W
Subjt:  MPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNW

Query:  ERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVKFEW--------------------------------------LGLGCVLMQDGN-----
        ++P +  E+R FLG   Y R+FI   S+L  PL  L +K+V+++W                                      + +G VL Q  +     
Subjt:  ERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVKFEW--------------------------------------LGLGCVLMQDGN-----

Query:  VIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFG--EKCHIFTDHKSL--KYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSR--
         + Y S ++ + + NY   D E+ A++ +LK WRHYL    E   I TDH++L  +   + +  N R  RW   ++D++  I Y PG AN +ADALSR  
Subjt:  VIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFG--EKCHIFTDHKSL--KYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSR--

Query:  --KSRLPKSALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELKN
             +PK                     + ++S + + Q  +      ++V   + D+ L        K +E   +L+    I  + ++ +PN ++L  
Subjt:  --KSRLPKSALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELKN

Query:  AILEEAHSSAYPMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRLT
         I+++ H     +HPG   +   + + + W G++++I EYV  C  CQ  K    +P G L P+P  E  WE ++MDF+  LP  SSG++ ++V+VDR +
Subjt:  AILEEAHSSAYPMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRLT

Query:  KTTRFIPIKMTSTLDQLARLYVDKIVSQYGVPVSIV
        K    +P   + T +Q AR++  ++++ +G P  I+
Subjt:  KTTRFIPIKMTSTLDQLARLYVDKIVSQYGVPVSIV

Arabidopsis top hits

e value

%identity

Alignment

ATMG00860.1 DNA/RNA polymerases superfamily protein

1.7e-21

48.42

Show/hide

Query:  HLRIVLQTLREKQLYAKFSKCEFWLEQVVFLG--HVVSAKGVSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKN
        HL +VLQ   + Q YA   KC F   Q+ +LG  H++S +GVS DP K+EA+V W  P + TE+R FLGL GYYRRF++++ ++  PLT L +KN
Subjt:  HLRIVLQTLREKQLYAKFSKCEFWLEQVVFLG--HVVSAKGVSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKN

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGCCATTCGGTTTAACGAATGCGCCAGCGGTTTTCATGGATCTCATGAACAGGATCTTCCATCGGTATTTAGATCAGTTTGTGATTGTGTTCATTGATGATATATTAGT
TTACTCAGTTGACAGAGAATCTCATGAGGAACATCTGAGGATTGTTCTACAGACTCTACGTGAAAAACAGTTATACGCTAAGTTCAGCAAATGTGAGTTCTGGTTGGAAC
AAGTAGTATTTTTGGGGCATGTAGTTTCAGCAAAAGGAGTTAGTGTCGATCCACAAAAAGTAGAAGCGGTTGTCAATTGGGAAAGACCAATTAGTGCGACAGAAGTACGT
AGTTTCCTGGGTTTGGCAGGATACTATAGGCGTTTTATTGAGGATTTCTCTCGATTGGCATTGCCTTTGACCGCTTTGACAAGGAAGAATGTTAAGTTTGAGTGGCTAGG
ATTAGGTTGTGTGCTTATGCAAGATGGGAATGTAATAGCTTATGCTTCAAGGCAGTTGAAGGAGCATGAGTGTAATTACCCTACCCATGATCTTGAGCTAGCAGCAGTTG
TTTTAGCACTAAAAATCTGGAGACACTATTTGTTCGGGGAAAAGTGCCATATTTTCACAGATCATAAAAGTCTGAAGTATATTTTTGATCAAAAAGAGCTAAATCTGAGA
CAAAGGCGATGGCTAGAACTGATTAAAGATTATGATTGTACTATAGAGTATCATCCAGGTAAGGCCAACGTAGTAGCAGATGCATTAAGTAGGAAGTCAAGACTTCCGAA
GAGTGCCTTGTGTGGTATTCGAGTAGCTTTGTTGAATGAGTTAAGAGGTTCCAAGGCAGTAGTAACTACAGAGGATTCAGGAAGTCTCTTAGCTCAATTTCAGGTTCGGT
CTTCTCTAGTAACTGAGATTGTAAGAAGACAGTCAGAAGACAGTAATTTACAGAAGAAGTTTGAGAAATCCAAGAAAGGCTTAGAGGTGGAGTTTGAGCTGAGAACAGAT
GGAGCCATTGTTAAACAAGGAAGATTATGTGTTCCGAATATCAGTGAGCTTAAGAATGCTATTCTAGAAGAAGCTCACAGTTCAGCTTACCCTATGCATCCAGGTAGCAC
CAAGATGTACAGAACTTTAAAGAAGACTTATTGGTGGTCTGGAATGAAGCAAGAGATAGCTGAATATGTTGATAGATGTTTGATTTGTCAACAGGTTAAACCAGTAAGAC
AGAGGCCAGGAGGATTTCTTAATCCTTTGCCAGTGCCAGAGTGGAAATGGGAGCATATTACTATGGATTTTCTATTTGGATTACCTCGTACATCCAGTGGACATGATGGT
ATATGGGTAATAGTAGACAGACTCACCAAGACGACACGATTTATACCGATTAAAATGACATCTACGTTAGACCAGCTAGCGAGATTATATGTTGATAAGATTGTGAGTCA
GTATGGAGTACCAGTGTCCATAGTTTAA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNWERPISATEVR
SFLGLAGYYRRFIEDFSRLALPLTALTRKNVKFEWLGLGCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLR
QRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTD
GAIVKQGRLCVPNISELKNAILEEAHSSAYPMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDG
IWVIVDRLTKTTRFIPIKMTSTLDQLARLYVDKIVSQYGVPVSIV

Cmc10g0281561 (gene) of Melon (Charmono) v1.1 genome