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Cmc10g0283701 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc10g0283701
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationCMiso1.1chr10:24115546..24117615
RNA-Seq ExpressionCmc10g0283701
SyntenyCmc10g0283701
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040613.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]2.3e-0856.45Show/hide
Query:  KGYFRHNVRSQGQHVGIGELPTSGSDVANRLLPTLSSMSVNMNHRRGIDRPSNHTVLSERPF
        KGY R  +   GQHV  GELP S +D+ANRLL T S  S  MNHR  IDRPSN     ER F
Subjt:  KGYFRHNVRSQGQHVGIGELPTSGSDVANRLLPTLSSMSVNMNHRRGIDRPSNHTVLSERPF
KAA0052854.1 transcription factor bHLH35 [Cucumis melo var. makuwa]2.4e-0580.56Show/hide
Query:  IGELPTSGSDVANRLLPTLSSMSVNMNHRRGIDRPS
        IGEL TSGSDV NRLLP   SMS  MNHRRGIDRPS
Subjt:  IGELPTSGSDVANRLLPTLSSMSVNMNHRRGIDRPS
TrEMBL top hitse value%identityAlignment
A0A5A7TC06 Retrovirus-related Pol polyprotein from transposon TNT 1-941.1e-0856.45Show/hide
Query:  KGYFRHNVRSQGQHVGIGELPTSGSDVANRLLPTLSSMSVNMNHRRGIDRPSNHTVLSERPF
        KGY R  +   GQHV  GELP S +D+ANRLL T S  S  MNHR  IDRPSN     ER F
Subjt:  KGYFRHNVRSQGQHVGIGELPTSGSDVANRLLPTLSSMSVNMNHRRGIDRPSNHTVLSERPF
A0A5A7UC12 Transcription factor bHLH351.2e-0580.56Show/hide
Query:  IGELPTSGSDVANRLLPTLSSMSVNMNHRRGIDRPS
        IGEL TSGSDV NRLLP   SMS  MNHRRGIDRPS
Subjt:  IGELPTSGSDVANRLLPTLSSMSVNMNHRRGIDRPS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGTCGGTAAAGGGTTACTTCCGACACAATGTTCGTTCACAAGGTCAACACGTCGGCATTGGGGAACTACCAACGTCTGGTAGCGACGTCGCAAACAGGTTACTACC
GACATTGTCAAGTATGTCGGTGAACATGAACCACCGACGCGGCATCGACAGACCTTCTAACCACACCGTGTTGTCAGAACGACCATTTGCGATGCATAATGTGCGTAGCG
AAATCCTTATAATAATAATAATATATATATATATATATATATATATATATTTAGTTTTCTTTTATTTAATCTTAATTTTTCTTTACAAATCGAAATTGAATTCGATTTAA
mRNA sequenceShow/hide mRNA sequence
TGGTTTAAGAAAGATGGGGAAATTAAGGTTATTTACAAAATAACCCTAATCCCAAAACCTTCTCAACTATCATTTCTGTGCACAGTTCACCACTCCCCTTCCCTCCTTCT
CATACTTCACCCCCTCTCTTCTTCCCTCCCCTTCGATTTCCCTTCTCTGAATCCCTCCATCTCCCTGATCACCTTGAATGTTTTGTGTCCATTCGCTTCTCTGAGACCAT
TCGTCTCCGTCACCCTCCTCAGATCCGTAGTGTCGAAAACTTGACCCTCCCTCTCCATTTTCCTTATATTTGTTTTGGTTTGGCGAGTTCTTGTGTCAATTCCCTTATCC
GAAAGTCTCTGTTTCCTTCATTTCGTAGCTTGGAAACATTATGAAACCCTTTTTGTCTTCGTCTCCCTCATTCTCCAAAACCCTCCTTTGTTTCCTTGAATGTTCGATTT
GGTTGTGTTTTAGGGTTCTGTCATTTTTTCCCTTGCTGCTCATTACGTCTCCTTCTCGGTTGATGTTCTTCTTGTCGCTCCTATGGAAACCCCAAAATGTTAGAACCAAT
TTTTGAGTCCATTCGGTTGATGTTCGTACCGTGGTAGATTCATCTCTTTTTCATTTAGAGAATGGTAGGGGTTCGGGATTAGGTATGAGCAAGGTTCGGGAGAAGAGAGC
ATGGTAGGGACATATGCTCGCCCCTTCACTTCTCAATTTGTACCGTTTGCCGATAATGAGGTGGAGACACCACAAGAAGAAGGGGGTCTTCTGATGTAGAGATACGTTGG
CAAAAGCGCGTTAGGAGAGGCTACGTTGATGTAGAAATGGACGTCGGTAAGAACGTTGTGAGAAAAGTGTCGTGAAAGGCACTCTCGACACGTGAATAGGATGACGTCGG
TAAAGGGTTACTTCCGACACAATGTTCGTTCACAAGGTCAACACGTCGGCATTGGGGAACTACCAACGTCTGGTAGCGACGTCGCAAACAGGTTACTACCGACATTGTCA
AGTATGTCGGTGAACATGAACCACCGACGCGGCATCGACAGACCTTCTAACCACACCGTGTTGTCAGAACGACCATTTGCGATGCATAATGTGCGTAGCGAAATCCTTAT
AATAATAATAATATATATATATATATATATATATATATATTTAGTTTTCTTTTATTTAATCTTAATTTTTCTTTACAAATCGAAATTGAATTCGATTTAAATTCATTCAA
ATACTAAAAAAAAATAAACGTAAATATAGTAGCCGTCTCCTCTTCAACACCACTATTGAACGACATGTCATTCTCCAAACCTGCTTCCTCCACTGTTTCTTCGTCATGTT
TGGTCGAATCTTGTAAATCATGTAACATTCCTAACATTTCATTATCTTCAAAAAACAGATTACTACTAGTTCCTTTAATATTG
Protein sequenceShow/hide protein sequence
MTSVKGYFRHNVRSQGQHVGIGELPTSGSDVANRLLPTLSSMSVNMNHRRGIDRPSNHTVLSERPFAMHNVRSEILIIIIIYIYIYIYIYLVFFYLILIFLYKSKLNSI