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Cmc10g0283721 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc10g0283721
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionReverse transcriptase Ty1/copia-type domain-containing protein
Genome locationCMiso1.1chr10:24133041..24134379
RNA-Seq ExpressionCmc10g0283721
SyntenyCmc10g0283721
Gene Ontology termsNA
InterPro domainsIPR013103 - Reverse transcriptase, RNA-dependent DNA polymerase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0051295.1 putative mitochondrial protein [Cucumis melo var. makuwa]2.2e-1882.46Show/hide
Query:  MDEEYVALLKAQTWHLVPPSPSQNVIGNKWVFRLKRNTNGSIQRYKARLVAKGFLQH
        MDEEY ALLKAQTWHLVPPS SQ V+G KWVFRLKRNT+GSI+ YK RLVAKGF QH
Subjt:  MDEEYVALLKAQTWHLVPPSPSQNVIGNKWVFRLKRNTNGSIQRYKARLVAKGFLQH

KAA0067278.1 putative mitochondrial protein [Cucumis melo var. makuwa]3.8e-1884.48Show/hide
Query:  MDEEYVALLKAQTWHLVPPSPSQNVIGNKWVFRLKRNTNGSIQRYKARLVAKGFLQHP
        MDEEY ALLKAQTWHLVP SPSQNVI NKWVF LK NT+G IQRYKA LVAKGF QHP
Subjt:  MDEEYVALLKAQTWHLVPPSPSQNVIGNKWVFRLKRNTNGSIQRYKARLVAKGFLQHP

TYJ96957.1 putative mitochondrial protein [Cucumis melo var. makuwa]7.6e-1984.21Show/hide
Query:  MDEEYVALLKAQTWHLVPPSPSQNVIGNKWVFRLKRNTNGSIQRYKARLVAKGFLQH
        MDEEY ALLKAQTWHLVPPSPSQ V G KWVFRLKRNT+GSI+ YK RLVAKGF QH
Subjt:  MDEEYVALLKAQTWHLVPPSPSQNVIGNKWVFRLKRNTNGSIQRYKARLVAKGFLQH

XP_016899477.1 PREDICTED: uncharacterized mitochondrial protein AtMg00820-like [Cucumis melo]7.6e-1984.21Show/hide
Query:  MDEEYVALLKAQTWHLVPPSPSQNVIGNKWVFRLKRNTNGSIQRYKARLVAKGFLQH
        MDEEY ALLKAQTWHLVPPSPSQ V G KWVFRLKRNT+GSI+ YK RLVAKGF QH
Subjt:  MDEEYVALLKAQTWHLVPPSPSQNVIGNKWVFRLKRNTNGSIQRYKARLVAKGFLQH

XP_016902198.1 PREDICTED: uncharacterized mitochondrial protein AtMg00810-like isoform X2 [Cucumis melo]1.5e-1982.76Show/hide
Query:  MDEEYVALLKAQTWHLVPPSPSQNVIGNKWVFRLKRNTNGSIQRYKARLVAKGFLQHP
        MDEEY ALLKA TW LVPPSPSQNV+G+KWVFRLKR+T+GSI RYKAR+VAKGF QHP
Subjt:  MDEEYVALLKAQTWHLVPPSPSQNVIGNKWVFRLKRNTNGSIQRYKARLVAKGFLQHP

TrEMBL top hitse value%identityAlignment
A0A1S4DU00 uncharacterized mitochondrial protein AtMg00820-like3.7e-1984.21Show/hide
Query:  MDEEYVALLKAQTWHLVPPSPSQNVIGNKWVFRLKRNTNGSIQRYKARLVAKGFLQH
        MDEEY ALLKAQTWHLVPPSPSQ V G KWVFRLKRNT+GSI+ YK RLVAKGF QH
Subjt:  MDEEYVALLKAQTWHLVPPSPSQNVIGNKWVFRLKRNTNGSIQRYKARLVAKGFLQH

A0A1S4E1U4 uncharacterized mitochondrial protein AtMg00810-like isoform X27.5e-2082.76Show/hide
Query:  MDEEYVALLKAQTWHLVPPSPSQNVIGNKWVFRLKRNTNGSIQRYKARLVAKGFLQHP
        MDEEY ALLKA TW LVPPSPSQNV+G+KWVFRLKR+T+GSI RYKAR+VAKGF QHP
Subjt:  MDEEYVALLKAQTWHLVPPSPSQNVIGNKWVFRLKRNTNGSIQRYKARLVAKGFLQHP

A0A5A7UCD7 Putative mitochondrial protein1.1e-1882.46Show/hide
Query:  MDEEYVALLKAQTWHLVPPSPSQNVIGNKWVFRLKRNTNGSIQRYKARLVAKGFLQH
        MDEEY ALLKAQTWHLVPPS SQ V+G KWVFRLKRNT+GSI+ YK RLVAKGF QH
Subjt:  MDEEYVALLKAQTWHLVPPSPSQNVIGNKWVFRLKRNTNGSIQRYKARLVAKGFLQH

A0A5A7VHR9 Putative mitochondrial protein1.8e-1884.48Show/hide
Query:  MDEEYVALLKAQTWHLVPPSPSQNVIGNKWVFRLKRNTNGSIQRYKARLVAKGFLQHP
        MDEEY ALLKAQTWHLVP SPSQNVI NKWVF LK NT+G IQRYKA LVAKGF QHP
Subjt:  MDEEYVALLKAQTWHLVPPSPSQNVIGNKWVFRLKRNTNGSIQRYKARLVAKGFLQHP

A0A5D3BCV9 Putative mitochondrial protein3.7e-1984.21Show/hide
Query:  MDEEYVALLKAQTWHLVPPSPSQNVIGNKWVFRLKRNTNGSIQRYKARLVAKGFLQH
        MDEEY ALLKAQTWHLVPPSPSQ V G KWVFRLKRNT+GSI+ YK RLVAKGF QH
Subjt:  MDEEYVALLKAQTWHLVPPSPSQNVIGNKWVFRLKRNTNGSIQRYKARLVAKGFLQH

SwissProt top hitse value%identityAlignment
P04146 Copia protein5.0e-0545.45Show/hide
Query:  TWHLVPPSPSQNVIGNKWVFRLKRNTNGSIQRYKARLVAKGFLQ
        TW +     ++N++ ++WVF +K N  G+  RYKARLVA+GF Q
Subjt:  TWHLVPPSPSQNVIGNKWVFRLKRNTNGSIQRYKARLVAKGFLQ

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-943.8e-0544.64Show/hide
Query:  MDEEYVALLKAQTWHLVPPSPSQNVIGNKWVFRLKRNTNGSIQRYKARLVAKGFLQ
        M EE  +L K  T+ LV     +  +  KWVF+LK++ +  + RYKARLV KGF Q
Subjt:  MDEEYVALLKAQTWHLVPPSPSQNVIGNKWVFRLKRNTNGSIQRYKARLVAKGFLQ

P92520 Uncharacterized mitochondrial protein AtMg008203.6e-1155.36Show/hide
Query:  MDEEYVALLKAQTWHLVPPSPSQNVIGNKWVFRLKRNTNGSIQRYKARLVAKGFLQ
        M EE  AL + +TW LVPP  +QN++G KWVF+ K +++G++ R KARLVAKGF Q
Subjt:  MDEEYVALLKAQTWHLVPPSPSQNVIGNKWVFRLKRNTNGSIQRYKARLVAKGFLQ

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE13.9e-1050.85Show/hide
Query:  MDEEYVALLKAQTWHLVPPSPSQ-NVIGNKWVFRLKRNTNGSIQRYKARLVAKGFLQHP
        M  E  A +   TW LVPP PS   ++G +W+F  K N++GS+ RYKARLVAKG+ Q P
Subjt:  MDEEYVALLKAQTWHLVPPSPSQ-NVIGNKWVFRLKRNTNGSIQRYKARLVAKGFLQHP

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE28.8e-1050.85Show/hide
Query:  MDEEYVALLKAQTWHLV-PPSPSQNVIGNKWVFRLKRNTNGSIQRYKARLVAKGFLQHP
        M  E  A +   TW LV PP PS  ++G +W+F  K N++GS+ RYKARLVAKG+ Q P
Subjt:  MDEEYVALLKAQTWHLV-PPSPSQNVIGNKWVFRLKRNTNGSIQRYKARLVAKGFLQHP

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 86.2e-1148.21Show/hide
Query:  MDEEYVALLKAQTWHLVPPSPSQNVIGNKWVFRLKRNTNGSIQRYKARLVAKGFLQ
        MD+E  A+    TW +    P++  IG KWV+++K N++G+I+RYKARLVAKG+ Q
Subjt:  MDEEYVALLKAQTWHLVPPSPSQNVIGNKWVFRLKRNTNGSIQRYKARLVAKGFLQ

ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase)2.5e-1255.36Show/hide
Query:  MDEEYVALLKAQTWHLVPPSPSQNVIGNKWVFRLKRNTNGSIQRYKARLVAKGFLQ
        M EE  AL + +TW LVPP  +QN++G KWVF+ K +++G++ R KARLVAKGF Q
Subjt:  MDEEYVALLKAQTWHLVPPSPSQNVIGNKWVFRLKRNTNGSIQRYKARLVAKGFLQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACGAAGAATATGTTGCTTTACTTAAGGCCCAAACGTGGCATCTTGTGCCACCATCACCCTCTCAAAATGTTATCGGCAACAAGTGGGTGTTCCGTTTAAAGCGCAA
TACCAATGGTTCCATTCAACGATACAAGGCTCGCTTAGTAGCTAAAGGATTTCTTCAACACCCATGA
mRNA sequenceShow/hide mRNA sequence
GGTCCAATCAACTTACCTACCAAACCAAATATCCTTAGTGACCAACAACTATCATTCTATCCTTCATCTTTCCCACTGAAAATAATTCTTACACTCCTAGATCTGAAAAC
TCGTCTCCCTCAGCTCTGGATCTCTTTGTTTTTCCTGCTCACCGAATGATTACTCGAGCAAATTCTAGAATCTTTAAACTCAAAACCTTAATTTCTTCCACAGCTACTGA
TTGGTCTCTCATTGAACCTATTAGAATCACACAAGCTTTAGCCACCCTTCAATAGAAAGAAGCCATGGACGAAGAATATGTTGCTTTACTTAAGGCCCAAACGTGGCATC
TTGTGCCACCATCACCCTCTCAAAATGTTATCGGCAACAAGTGGGTGTTCCGTTTAAAGCGCAATACCAATGGTTCCATTCAACGATACAAGGCTCGCTTAGTAGCTAAA
GGATTTCTTCAACACCCATGAGTTGATTTCTTTGAGACTTTCAGTCTGGTTGTCAAGGCCTCAATAATTCGCATTATTCTTAGCCTTGCTGTGACCAACAGATGACAACT
TCGCCAACTTGACTTCAATAATGCTTTCCTAAATAGTAGCCTAACGAAAACTGTGTATATGCAACAGTCACCCGGGTATGTTCATCCTTTTTTTCCCAATTATGTTTGCA
AGCTTGACAAGGCCATCTATGACTAGAAGTAATCTCCTCGTGCTTGGAATGAAACTTTGTCTAAGAAATTATTTAGTTGAGGCTTTGAGAACTCTAAATCTTACTCATCC
TTGTTTATCCTTCGCCGCCAATGTTCCATAATTTTACTATTGGTATACGTTGATGATGTTGTTGTTACTAGAATGATACTAAGCTAATTAATGAACTTGTTCAATCTCTT
GACAGAAAATTTTCTTTGAAAGACTTGGGGATCTTAACTTATTTTATGGAGTTCCAAGTTCACTATTTTGATTCCAATTTTGGTCTTAATCATCAAACATATGTTGATGA
TTTACTCAGAAATTGTACTTTTAGGACTTAAAACTAGGCCTTCATCGAGTGTTATTGGCAAGCATCTATCTTTTTCCGAAGGTACTCCTCTTGCTGATCCATTCCTATGC
AGAAAGTACAATCGGGGATCTCCAATATTTAACTCAAACTCGACCGGATATCTCATATATAGTAAATCATTTGAGTTAGTTTCTCCAAAGACCCACTTATGCACATTAGC
AAGCTGTAAAACGGGTCCGTCGATACTTGAATGGAACAAAATCATTCGGTTTGTTATTTCAAAGAGATATTGATCTATCTATCTCTACATATTTTAATATCAATTGGGCA
TCCAATATTGATGATAGAA
Protein sequenceShow/hide protein sequence
MDEEYVALLKAQTWHLVPPSPSQNVIGNKWVFRLKRNTNGSIQRYKARLVAKGFLQHP