; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc11g0284231 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc11g0284231
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionRibosome hibernation promotion factor
Genome locationCMiso1.1chr11:42839..47159
RNA-Seq ExpressionCmc11g0284231
SyntenyCmc11g0284231
Gene Ontology termsGO:0044238 - primary metabolic process (biological process)
InterPro domainsIPR003489 - Ribosome hibernation promoting factor/RaiA
IPR032528 - Sigma 54 modulation/S30EA ribosomal protein, C-terminal
IPR034694 - Ribosome hibernation promoting factor, long/plastid
IPR036567 - Ribosome hibernation promotion factor-like
IPR038416 - Sigma 54 modulation/S30EA ribosomal protein, C-terminal domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004147328.1 ribosome-binding factor PSRP1, chloroplastic [Cucumis sativus]2.5e-16197.42Show/hide
Query:  MATLTSSMQANLLSDHSLPPPHPSSSTVSYFPAPFSLHFSALKVHALSSNASAFFNSCKNFGTIETASRNRHASNSFSIRMTWDGHLSSVKLIVQGKNLE
        MATLTSSMQANLLSDHSL PP  SSSTVSYFPA FSLHFSALKVHALSSNASAFFNSCKNFGTIETASRNRHASNSFSIRMTWDG LSSVKLIVQGKNLE
Subjt:  MATLTSSMQANLLSDHSLPPPHPSSSTVSYFPAPFSLHFSALKVHALSSNASAFFNSCKNFGTIETASRNRHASNSFSIRMTWDGHLSSVKLIVQGKNLE

Query:  LTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGQRIRRCEVTLFTKKHGVVRAEEDAETVFASIDLVSSIIQRKLRKIKEKDSDRGRHVKGF
        LTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKG RIRRCEVTLFTKKHGVVRAEEDAETVFASIDLVSSIIQRKLRKIKEKDSDRGRHVKGF
Subjt:  LTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGQRIRRCEVTLFTKKHGVVRAEEDAETVFASIDLVSSIIQRKLRKIKEKDSDRGRHVKGF

Query:  DRSKVREPAPIVVEDEEEEVFQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGTAEKLEPVTV
        DRSKVREPAPIVVEDEEEEVFQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGTAEKLEPVT+
Subjt:  DRSKVREPAPIVVEDEEEEVFQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGTAEKLEPVTV

Query:  EAAREPSLAE
        EA REPSLAE
Subjt:  EAAREPSLAE

XP_008460813.1 PREDICTED: ribosome-binding factor PSRP1, chloroplastic [Cucumis melo]1.1e-167100Show/hide
Query:  MATLTSSMQANLLSDHSLPPPHPSSSTVSYFPAPFSLHFSALKVHALSSNASAFFNSCKNFGTIETASRNRHASNSFSIRMTWDGHLSSVKLIVQGKNLE
        MATLTSSMQANLLSDHSLPPPHPSSSTVSYFPAPFSLHFSALKVHALSSNASAFFNSCKNFGTIETASRNRHASNSFSIRMTWDGHLSSVKLIVQGKNLE
Subjt:  MATLTSSMQANLLSDHSLPPPHPSSSTVSYFPAPFSLHFSALKVHALSSNASAFFNSCKNFGTIETASRNRHASNSFSIRMTWDGHLSSVKLIVQGKNLE

Query:  LTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGQRIRRCEVTLFTKKHGVVRAEEDAETVFASIDLVSSIIQRKLRKIKEKDSDRGRHVKGF
        LTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGQRIRRCEVTLFTKKHGVVRAEEDAETVFASIDLVSSIIQRKLRKIKEKDSDRGRHVKGF
Subjt:  LTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGQRIRRCEVTLFTKKHGVVRAEEDAETVFASIDLVSSIIQRKLRKIKEKDSDRGRHVKGF

Query:  DRSKVREPAPIVVEDEEEEVFQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGTAEKLEPVTV
        DRSKVREPAPIVVEDEEEEVFQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGTAEKLEPVTV
Subjt:  DRSKVREPAPIVVEDEEEEVFQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGTAEKLEPVTV

Query:  EAAREPSLAE
        EAAREPSLAE
Subjt:  EAAREPSLAE

XP_022922607.1 ribosome-binding factor PSRP1, chloroplastic [Cucurbita moschata]2.8e-13684.86Show/hide
Query:  MATLTSSMQANLLSDHSLPP--PHPSSSTVSYFPAPFSL----HFSALKVHALSSNASAFFNSCKN-FGTIETASRNRHASNSFSIRMTWDGHLSSVKLI
        MA LTSSMQ NLLS HSL P     SSSTVS FP  FSL    + + LK HALSS+ASAFFNSC + F TI  A R RHA+ SFSIRM+WDG LSSVKLI
Subjt:  MATLTSSMQANLLSDHSLPP--PHPSSSTVSYFPAPFSL----HFSALKVHALSSNASAFFNSCKN-FGTIETASRNRHASNSFSIRMTWDGHLSSVKLI

Query:  VQGKNLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGQRIRRCEVTLFTKKHGVVRAEEDAETVFASIDLVSSIIQRKLRKIKEKDSDR
        VQGKNLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKG RIRRCEVTLFTKKHGVVRAEEDAETV+ASIDLVSSI+QRKLRKIKEKDSD 
Subjt:  VQGKNLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGQRIRRCEVTLFTKKHGVVRAEEDAETVFASIDLVSSIIQRKLRKIKEKDSDR

Query:  GRHVKGFDRSKVREPAPIVVEDEEEEVFQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGTAE
        GRH+KGFDRSK+REPAPIVVEDEEEEV QEDGGE IDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKE+G AE
Subjt:  GRHVKGFDRSKVREPAPIVVEDEEEEVFQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGTAE

Query:  KLEPVTVEAAREPSLAE
        K+E VTVE ARE SLAE
Subjt:  KLEPVTVEAAREPSLAE

XP_023551717.1 ribosome-binding factor PSRP1, chloroplastic [Cucurbita pepo subsp. pepo]1.1e-13785.08Show/hide
Query:  MATLTSSMQANLLSDHSLPPPHPSSSTVSYFPAPFSL----HFSALKVHALSSNASAFFNSCKN-FGTIETASRNRHASNSFSIRMTWDGHLSSVKLIVQ
        MA LTSSMQ NLLS HSL P   SS+TVS FP  FSL    + + LK+HALSS+ASAFFNSC + F TI  A R RHA+ SFSIRM+WDG LSSVKLIVQ
Subjt:  MATLTSSMQANLLSDHSLPPPHPSSSTVSYFPAPFSL----HFSALKVHALSSNASAFFNSCKN-FGTIETASRNRHASNSFSIRMTWDGHLSSVKLIVQ

Query:  GKNLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGQRIRRCEVTLFTKKHGVVRAEEDAETVFASIDLVSSIIQRKLRKIKEKDSDRGR
        GKNLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKG RIRRCEVTLFTKKHGVVRAEEDAETV+ASIDLVSSI+QRKLRKIKEKDSD GR
Subjt:  GKNLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGQRIRRCEVTLFTKKHGVVRAEEDAETVFASIDLVSSIIQRKLRKIKEKDSDRGR

Query:  HVKGFDRSKVREPAPIVVEDEEEEVFQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGTAEKL
        H+KGFDRSK+REPAPIVVEDEEEEV QEDGGE IDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKE+G AEK+
Subjt:  HVKGFDRSKVREPAPIVVEDEEEEVFQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGTAEKL

Query:  EPVTVEAAREPSLAE
        E VTVE ARE SLAE
Subjt:  EPVTVEAAREPSLAE

XP_038900446.1 ribosome-binding factor PSRP1, chloroplastic [Benincasa hispida]4.1e-14388.18Show/hide
Query:  MATLTSSMQANLLSDHSL-PPPHPSSSTVSYFPAPFSLHFSALKVHAL--SSNASAFFNSCKNFGTIETASRNRHASNSFSIRMTWDGHLSSVKLIVQGK
        MA LTSSM  +LL DHSL      SSST+S+FPA FSLHFSALKVHAL  SS ASAFFNSCK+F T ETASRNRHASNSF++RM+WDG LSSVKLIVQ K
Subjt:  MATLTSSMQANLLSDHSL-PPPHPSSSTVSYFPAPFSLHFSALKVHAL--SSNASAFFNSCKNFGTIETASRNRHASNSFSIRMTWDGHLSSVKLIVQGK

Query:  NLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGQRIRRCEVTLFTKKHGVVRAEEDAETVFASIDLVSSIIQRKLRKIKEKDSDRGRHV
        NLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKG RIRRCEVTLFTKKHGVVRAEEDAETV+ASIDLVSSIIQRKLRKIKEKDSDRGRH+
Subjt:  NLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGQRIRRCEVTLFTKKHGVVRAEEDAETVFASIDLVSSIIQRKLRKIKEKDSDRGRHV

Query:  KGFDRSKVREPAPIVVEDEEEEVFQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGTAEKLEP
        KGFDRSKVREPAPIVVEDE+EEVF+ED GEVIDEIVR KYFDMPPLT+EEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENG AEKLE 
Subjt:  KGFDRSKVREPAPIVVEDEEEEVFQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGTAEKLEP

Query:  VTVEAAREPSLAE
        VT++AAREPSLAE
Subjt:  VTVEAAREPSLAE

TrEMBL top hitse value%identityAlignment
A0A1S3CCT7 ribosome-binding factor PSRP1, chloroplastic5.2e-168100Show/hide
Query:  MATLTSSMQANLLSDHSLPPPHPSSSTVSYFPAPFSLHFSALKVHALSSNASAFFNSCKNFGTIETASRNRHASNSFSIRMTWDGHLSSVKLIVQGKNLE
        MATLTSSMQANLLSDHSLPPPHPSSSTVSYFPAPFSLHFSALKVHALSSNASAFFNSCKNFGTIETASRNRHASNSFSIRMTWDGHLSSVKLIVQGKNLE
Subjt:  MATLTSSMQANLLSDHSLPPPHPSSSTVSYFPAPFSLHFSALKVHALSSNASAFFNSCKNFGTIETASRNRHASNSFSIRMTWDGHLSSVKLIVQGKNLE

Query:  LTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGQRIRRCEVTLFTKKHGVVRAEEDAETVFASIDLVSSIIQRKLRKIKEKDSDRGRHVKGF
        LTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGQRIRRCEVTLFTKKHGVVRAEEDAETVFASIDLVSSIIQRKLRKIKEKDSDRGRHVKGF
Subjt:  LTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGQRIRRCEVTLFTKKHGVVRAEEDAETVFASIDLVSSIIQRKLRKIKEKDSDRGRHVKGF

Query:  DRSKVREPAPIVVEDEEEEVFQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGTAEKLEPVTV
        DRSKVREPAPIVVEDEEEEVFQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGTAEKLEPVTV
Subjt:  DRSKVREPAPIVVEDEEEEVFQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGTAEKLEPVTV

Query:  EAAREPSLAE
        EAAREPSLAE
Subjt:  EAAREPSLAE

A0A5D3BQR1 Ribosome-binding factor PSRP15.2e-168100Show/hide
Query:  MATLTSSMQANLLSDHSLPPPHPSSSTVSYFPAPFSLHFSALKVHALSSNASAFFNSCKNFGTIETASRNRHASNSFSIRMTWDGHLSSVKLIVQGKNLE
        MATLTSSMQANLLSDHSLPPPHPSSSTVSYFPAPFSLHFSALKVHALSSNASAFFNSCKNFGTIETASRNRHASNSFSIRMTWDGHLSSVKLIVQGKNLE
Subjt:  MATLTSSMQANLLSDHSLPPPHPSSSTVSYFPAPFSLHFSALKVHALSSNASAFFNSCKNFGTIETASRNRHASNSFSIRMTWDGHLSSVKLIVQGKNLE

Query:  LTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGQRIRRCEVTLFTKKHGVVRAEEDAETVFASIDLVSSIIQRKLRKIKEKDSDRGRHVKGF
        LTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGQRIRRCEVTLFTKKHGVVRAEEDAETVFASIDLVSSIIQRKLRKIKEKDSDRGRHVKGF
Subjt:  LTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGQRIRRCEVTLFTKKHGVVRAEEDAETVFASIDLVSSIIQRKLRKIKEKDSDRGRHVKGF

Query:  DRSKVREPAPIVVEDEEEEVFQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGTAEKLEPVTV
        DRSKVREPAPIVVEDEEEEVFQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGTAEKLEPVTV
Subjt:  DRSKVREPAPIVVEDEEEEVFQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGTAEKLEPVTV

Query:  EAAREPSLAE
        EAAREPSLAE
Subjt:  EAAREPSLAE

A0A6J1CJG5 ribosome-binding factor PSRP1, chloroplastic5.2e-13685.44Show/hide
Query:  MATLTSSMQANLLSDHSLPPPHPSSSTVSYFPAPFSL----HFSALKVHALSSNASAFFNSCKNFGTIETASRNRHASNSFSIRMTWDGHLSSVKLIVQG
        MATLTSSM  NLLS  S      SSST S FPA FSL    + SALK+H LSS+ S FFNSC  F TI+ A RNRHA+NSF+IRM+WDG LSSVKLIVQG
Subjt:  MATLTSSMQANLLSDHSLPPPHPSSSTVSYFPAPFSL----HFSALKVHALSSNASAFFNSCKNFGTIETASRNRHASNSFSIRMTWDGHLSSVKLIVQG

Query:  KNLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGQRIRRCEVTLFTKKHGVVRAEEDAETVFASIDLVSSIIQRKLRKIKEKDSDRGRH
        KNLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKG RIRRCEVTLFTKKHGVVR EEDAETV+ASIDLVSSIIQRKLRKIKEKDSDRGRH
Subjt:  KNLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGQRIRRCEVTLFTKKHGVVRAEEDAETVFASIDLVSSIIQRKLRKIKEKDSDRGRH

Query:  VKGFDRSKVREPAPIVVED--EEEEVFQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGTAEK
        +KGFDR KVREPAPIVVED  EEEEV  ED GEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENG AEK
Subjt:  VKGFDRSKVREPAPIVVED--EEEEVFQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGTAEK

Query:  LEPVTVEAAREPSLAE
        LEPVTVE AREPSLAE
Subjt:  LEPVTVEAAREPSLAE

A0A6J1E3S3 ribosome-binding factor PSRP1, chloroplastic1.4e-13684.86Show/hide
Query:  MATLTSSMQANLLSDHSLPP--PHPSSSTVSYFPAPFSL----HFSALKVHALSSNASAFFNSCKN-FGTIETASRNRHASNSFSIRMTWDGHLSSVKLI
        MA LTSSMQ NLLS HSL P     SSSTVS FP  FSL    + + LK HALSS+ASAFFNSC + F TI  A R RHA+ SFSIRM+WDG LSSVKLI
Subjt:  MATLTSSMQANLLSDHSLPP--PHPSSSTVSYFPAPFSL----HFSALKVHALSSNASAFFNSCKN-FGTIETASRNRHASNSFSIRMTWDGHLSSVKLI

Query:  VQGKNLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGQRIRRCEVTLFTKKHGVVRAEEDAETVFASIDLVSSIIQRKLRKIKEKDSDR
        VQGKNLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKG RIRRCEVTLFTKKHGVVRAEEDAETV+ASIDLVSSI+QRKLRKIKEKDSD 
Subjt:  VQGKNLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGQRIRRCEVTLFTKKHGVVRAEEDAETVFASIDLVSSIIQRKLRKIKEKDSDR

Query:  GRHVKGFDRSKVREPAPIVVEDEEEEVFQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGTAE
        GRH+KGFDRSK+REPAPIVVEDEEEEV QEDGGE IDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKE+G AE
Subjt:  GRHVKGFDRSKVREPAPIVVEDEEEEVFQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGTAE

Query:  KLEPVTVEAAREPSLAE
        K+E VTVE ARE SLAE
Subjt:  KLEPVTVEAAREPSLAE

A0A6J1J523 ribosome-binding factor PSRP1, chloroplastic2.3e-13186.99Show/hide
Query:  SSSTVSYFPAPFSL----HFSALKVHALSSNASAFFNSCKN-FGTIETASRNRHASNSFSIRMTWDGHLSSVKLIVQGKNLELTEAVKKHVEEKVGKAVQ
        SSSTVS FP  FSL    + + LK+HALSS+ASAFFNSC + F TI  A R RHA+ SFSIRM+WDG LSSVKLIVQGKNLELTEAVKKHVEEKVGKAVQ
Subjt:  SSSTVSYFPAPFSL----HFSALKVHALSSNASAFFNSCKN-FGTIETASRNRHASNSFSIRMTWDGHLSSVKLIVQGKNLELTEAVKKHVEEKVGKAVQ

Query:  KHSHLVREVDVRLSVRGGEFGKGQRIRRCEVTLFTKKHGVVRAEEDAETVFASIDLVSSIIQRKLRKIKEKDSDRGRHVKGFDRSKVREPAPIVVEDEEE
        KHSHLVREVDVRLSVRGGEFGKG RIRRCEVTLFTKKHGVVRAEEDAETV+ASIDLVSSI+QRKLRKIKEKDSD GRH+KGFDRSK+REPAPIVVEDEEE
Subjt:  KHSHLVREVDVRLSVRGGEFGKGQRIRRCEVTLFTKKHGVVRAEEDAETVFASIDLVSSIIQRKLRKIKEKDSDRGRHVKGFDRSKVREPAPIVVEDEEE

Query:  EVFQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGTAEKLEPVTVEAAREPSLAE
        EV QEDGGE IDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENG AEK+E VTVE ARE SLAE
Subjt:  EVFQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGTAEKLEPVTVEAAREPSLAE

SwissProt top hitse value%identityAlignment
P19954 Ribosome-binding factor PSRP1, chloroplastic2.5e-8762.5Show/hide
Query:  LSSNASAFFNSCKNFGTIETASRNRHASNSFSIRMTWDGHLSSVKLIVQGKNLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGQRIRR
        LSS  S F NSC     +   S     +    + M+WDG LSSVKLI+QG+NLE+++ V+ HVE+KVGK+V KHSHLVREVDVRLS RGG+  KG ++RR
Subjt:  LSSNASAFFNSCKNFGTIETASRNRHASNSFSIRMTWDGHLSSVKLIVQGKNLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGQRIRR

Query:  CEVTLFTKKHGVVRAEEDAETVFASIDLVSSIIQRKLRKIKEKDSDRGRHVKGFDRSKVREPAPIVVEDEE--EEV------FQEDGGEVIDEIVRTKYF
        CEVTLFTK+HGV+RAEEDAE++++SIDLVSSIIQRKLRKIK+K SD GRH+KGF+RSKVR+P P+ +  EE  EEV         +  + I+E+VRTKYF
Subjt:  CEVTLFTKKHGVVRAEEDAETVFASIDLVSSIIQRKLRKIKEKDSDRGRHVKGFDRSKVREPAPIVVEDEE--EEV------FQEDGGEVIDEIVRTKYF

Query:  DMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGTAEKLEPVTVEAAREPSLAE
        DMPPLT+ EA+EQL+N+DHDFY FRNEETG+INILYKRK+GGYGLIIPK+ G  EKLE + V+  ++PS AE
Subjt:  DMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGTAEKLEPVTVEAAREPSLAE

P47908 Ribosome hibernation promotion factor3.3e-3140.4Show/hide
Query:  VKLIVQGKNLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGQRIRRCEVTLFTKKHGVVRAEEDAETVFASIDLVSSIIQRKLRKIKEK
        +KL++QG N+ +TE++  +VE K+ KA +       +VDV LSV      +     + EVT++     V+RA+E +E ++ASIDLVS  I R+LRK KEK
Subjt:  VKLIVQGKNLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGQRIRRCEVTLFTKKHGVVRAEEDAETVFASIDLVSSIIQRKLRKIKEK

Query:  DSDRGRHVKGFDRSKVREPAPIVVEDEEEEVFQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPK
        +  +  HV    + K  E  P   +   + +  +   E+  E+VR KYF MPP+T++EA+EQL+ +DHDFY F N++T  IN++Y R  GGYG+I P+
Subjt:  DSDRGRHVKGFDRSKVREPAPIVVEDEEEEVFQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPK

P74518 Ribosome hibernation promotion factor4.2e-3442.86Show/hide
Query:  VKLIVQGKNLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGQRI---RRCEVTLFTKKHGVVRAEEDAETVFASIDLVSSIIQRKLRKI
        +KL++QG N+ +TEA+  +VEEKV +AV+   +L  +VDV LSV      +  RI    + EVT++     V+RA+E +E ++ASIDLV+  I R+LRK 
Subjt:  VKLIVQGKNLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGQRI---RRCEVTLFTKKHGVVRAEEDAETVFASIDLVSSIIQRKLRKI

Query:  KEKDSDRGR-HVKGFDRSKVREPAPIVVEDEEEEVFQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLII
        KE+  D+   +VK    S++ E  P+     EE +  +   E+  E++R KYF MPP+ +E+A+EQL+ +DHDFY FRN++T EIN++Y R  GGYG+I 
Subjt:  KEKDSDRGR-HVKGFDRSKVREPAPIVVEDEEEEVFQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLII

Query:  PKE
        P +
Subjt:  PKE

Q49VV1 Ribosome hibernation promotion factor3.8e-1932.99Show/hide
Query:  VKLIVQGKNLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGQRIRRCEVTLFTKKHGVVRAEEDAETVFASIDLVSSIIQRKLRKIKEK
        ++  + G+NL +T+A++ ++EEK+GK ++++ + V      + V+  +        + EVT+  KK   +RAEE  + ++A IDL+++ ++R++RK K +
Subjt:  VKLIVQGKNLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGQRIRRCEVTLFTKKHGVVRAEEDAETVFASIDLVSSIIQRKLRKIKEK

Query:  DSDRGRHVKGFDRSKVREPAPIVVEDEEEEVFQEDGGEVID--EIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLI
         + R R+ +G   +    P     E++E    Q D  E  +  EI+R K F + P+  EEA+ Q+  + HDF+ F + ET   +I+YKRKDG YGLI
Subjt:  DSDRGRHVKGFDRSKVREPAPIVVEDEEEEVFQEDGGEVID--EIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLI

Q9RVE7 Ribosome hibernation promotion factor2.2e-1932.99Show/hide
Query:  VQGKNLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGQRIRRCEVTLFTKKHGVVRAEEDAETVFASIDLVSSIIQRKLRKIKE---KD
        + G+N+E+TE ++++VEEK+ + + +++  + +  V L+VR  +    +R  R EV L     G++RAEE    ++A+ID  S +++R+LRK K    K 
Subjt:  VQGKNLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGQRIRRCEVTLFTKKHGVVRAEEDAETVFASIDLVSSIIQRKLRKIKE---KD

Query:  SDRGRHVKGFDRSKVREPAPIVVEDEEEEVFQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLI
           GR         +  PA   V  +      +D  E   EIVR K F++ P++ E+A+ Q++ + HDFY F++ + G+  ++Y+R+DG YGLI
Subjt:  SDRGRHVKGFDRSKVREPAPIVVEDEEEEVFQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLI

Arabidopsis top hitse value%identityAlignment
AT5G24490.1 30S ribosomal protein, putative2.2e-9471.37Show/hide
Query:  RNRHASNSFSIRMTWDGHLSSVKLIVQGKNLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGQRIRRCEVTLFTKKHGVVRAEEDAETV
        R+ +  +S +++M+WDG L+SVKLI+QGKNLEL+E +K+HVEEKVGK+VQKHSHLVREVDVRLSVRGGEFGKG RIRRCEVTLFTKKHGVVRAEEDAETV
Subjt:  RNRHASNSFSIRMTWDGHLSSVKLIVQGKNLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGQRIRRCEVTLFTKKHGVVRAEEDAETV

Query:  FASIDLVSSIIQRKLRKIKEKDSDRGRHVKGFDRSKVREPA-PIVVEDEEEEV-----FQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGF
        +A IDLVS+IIQRKLRKIKEKDSD GRH+KGF+R KVREP    VVED E+        +E+  ++I EIVRTK F+MPPLTV EA+EQL+ + HDFYGF
Subjt:  FASIDLVSSIIQRKLRKIKEKDSDRGRHVKGFDRSKVREPA-PIVVEDEEEEV-----FQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGF

Query:  RNEETGEINILYKRKDGGYGLIIPKENGTAEKLEPVTVEAAREPSLAE
        +NEETGEINI+YKRK+GGYGLIIPK++G AEK+EP+  E   E S AE
Subjt:  RNEETGEINILYKRKDGGYGLIIPKENGTAEKLEPVTVEAAREPSLAE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGACTCTCACCTCTTCCATGCAGGCCAATCTTCTTTCTGATCACTCCTTACCTCCTCCTCACCCTTCTTCTTCTACCGTTTCTTACTTTCCCGCTCCCTTCTCTCT
TCACTTCTCTGCGCTCAAAGTTCATGCTCTTTCTTCCAATGCTTCTGCTTTCTTCAACTCTTGCAAGAACTTTGGAACCATTGAGACTGCATCCCGTAACCGTCATGCCT
CAAACTCTTTCAGTATTCGGATGACCTGGGACGGCCACCTCTCCTCTGTTAAATTAATTGTCCAAGGCAAAAATTTGGAGTTGACTGAAGCAGTTAAGAAGCACGTGGAA
GAGAAGGTGGGCAAGGCAGTCCAGAAGCACAGTCACTTAGTTAGAGAAGTAGATGTCAGACTTTCAGTTAGAGGCGGGGAGTTTGGGAAGGGTCAAAGGATTAGAAGATG
CGAGGTTACTTTATTCACAAAGAAGCATGGAGTTGTACGGGCAGAGGAAGATGCTGAGACCGTCTTTGCAAGCATTGATTTGGTATCCTCCATCATACAGAGGAAGTTGA
GGAAGATTAAAGAGAAAGATTCTGACCGTGGCCGACATGTGAAAGGATTTGACAGATCAAAAGTAAGAGAACCTGCACCCATAGTAGTTGAAGATGAGGAAGAGGAAGTT
TTTCAGGAAGATGGTGGAGAAGTTATTGACGAGATTGTTCGGACAAAATACTTTGATATGCCACCTTTGACAGTTGAAGAAGCAATCGAACAACTCAAGAATATTGACCA
TGATTTCTATGGTTTCCGGAATGAAGAAACTGGTGAGATTAACATCTTATATAAAAGAAAGGATGGAGGATATGGACTTATTATCCCAAAAGAAAATGGCACAGCTGAGA
AATTAGAGCCTGTGACAGTTGAAGCAGCGAGAGAACCATCCTTGGCGGAATGA
mRNA sequenceShow/hide mRNA sequence
CACCCTCTTGCTTAAAAAAAAAAGTTACATACCCTCTTGCTTAAAAAAAAAAGTTATATACCCTCTTTGACAAATATCAAAGGAGAAAAAGACAAAAACTGACATTGGCT
TCCCATCATCCAGAGAAAAGAAAGAAAAGCCGCGCGGGTTGTTTATCCACTTGTTTCCCTTATTATCCTCATCGATTCCAAGTTTTGAACTCAACAATGGCGACTCTCAC
CTCTTCCATGCAGGCCAATCTTCTTTCTGATCACTCCTTACCTCCTCCTCACCCTTCTTCTTCTACCGTTTCTTACTTTCCCGCTCCCTTCTCTCTTCACTTCTCTGCGC
TCAAAGTTCATGCTCTTTCTTCCAATGCTTCTGCTTTCTTCAACTCTTGCAAGAACTTTGGAACCATTGAGACTGCATCCCGTAACCGTCATGCCTCAAACTCTTTCAGT
ATTCGGATGACCTGGGACGGCCACCTCTCCTCTGTTAAATTAATTGTCCAAGGCAAAAATTTGGAGTTGACTGAAGCAGTTAAGAAGCACGTGGAAGAGAAGGTGGGCAA
GGCAGTCCAGAAGCACAGTCACTTAGTTAGAGAAGTAGATGTCAGACTTTCAGTTAGAGGCGGGGAGTTTGGGAAGGGTCAAAGGATTAGAAGATGCGAGGTTACTTTAT
TCACAAAGAAGCATGGAGTTGTACGGGCAGAGGAAGATGCTGAGACCGTCTTTGCAAGCATTGATTTGGTATCCTCCATCATACAGAGGAAGTTGAGGAAGATTAAAGAG
AAAGATTCTGACCGTGGCCGACATGTGAAAGGATTTGACAGATCAAAAGTAAGAGAACCTGCACCCATAGTAGTTGAAGATGAGGAAGAGGAAGTTTTTCAGGAAGATGG
TGGAGAAGTTATTGACGAGATTGTTCGGACAAAATACTTTGATATGCCACCTTTGACAGTTGAAGAAGCAATCGAACAACTCAAGAATATTGACCATGATTTCTATGGTT
TCCGGAATGAAGAAACTGGTGAGATTAACATCTTATATAAAAGAAAGGATGGAGGATATGGACTTATTATCCCAAAAGAAAATGGCACAGCTGAGAAATTAGAGCCTGTG
ACAGTTGAAGCAGCGAGAGAACCATCCTTGGCGGAATGATGGGCCTTGGCGGAATGATGGGAATTGACGGAGGAAGTTTCACGTTCAGGATAGTTTACCACTGTTACCTT
TGCTTAAAACTTCAAAACTTCAACTTCAACATGCATCTGAAGGCGTTTCTTGTAGAGTATATAGATTTAGATTTGAGGCTATTTGGTGATGAAGATAATATTGGAACAAG
AAATGAGTAATAAGTAAAATAAGATGCAAAATATTCTAACGAATGAATGATTCAGCTTGCTGGGGTGTTACCATGAAAGTATATTCTAATGAAGAAATGATTCAACATTC
ATCTGAAATCTATTACCATCAACGGCCAGAAACCAAAAACTGACGAGGATCACCCCTAGTTTCTTAGTTATTATGAGATAATTTTCAAAAACTAAAGTTATTATTTTTAT
ATTTGTTTTAGTTTTCAAAATATGTATTGTTAAACGAGAAATGTTGAATC
Protein sequenceShow/hide protein sequence
MATLTSSMQANLLSDHSLPPPHPSSSTVSYFPAPFSLHFSALKVHALSSNASAFFNSCKNFGTIETASRNRHASNSFSIRMTWDGHLSSVKLIVQGKNLELTEAVKKHVE
EKVGKAVQKHSHLVREVDVRLSVRGGEFGKGQRIRRCEVTLFTKKHGVVRAEEDAETVFASIDLVSSIIQRKLRKIKEKDSDRGRHVKGFDRSKVREPAPIVVEDEEEEV
FQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGTAEKLEPVTVEAAREPSLAE