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Cmc11g0286701 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc11g0286701
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionC2H2-type domain-containing protein
Genome locationCMiso1.1chr11:1892590..1893253
RNA-Seq ExpressionCmc11g0286701
SyntenyCmc11g0286701
Gene Ontology termsNA
InterPro domainsIPR013087 - Zinc finger C2H2-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8651931.1 hypothetical protein Csa_006531, partial [Cucumis sativus]4.3e-4791.59Show/hide
Query:  MDDKSLPYNLRLRKDHKSSSPTEHSKAHKQDTDFQEKAS-DEIYVSHLIVDYRCDKCGCSFDIESSLSSHHCKNKNEREAMEIEGHEILGENKSFRKRSR
        MDDKSLPYNLRLRKDHKSSSPTEHSK HK D DFQEKAS D+IYVSHLIVDYRC+KCGCSFDIESSLSSHHCKNKNEREAMEIEGH ILGENKSFRK+SR
Subjt:  MDDKSLPYNLRLRKDHKSSSPTEHSKAHKQDTDFQEKAS-DEIYVSHLIVDYRCDKCGCSFDIESSLSSHHCKNKNEREAMEIEGHEILGENKSFRKRSR

Query:  KGIPRRA
        KG+PRRA
Subjt:  KGIPRRA

KAG6571418.1 hypothetical protein SDJN03_30333, partial [Cucurbita argyrosperma subsp. sororia]3.2e-2663.06Show/hide
Query:  MDDKSLPYNLRLRKDHKSSSPTEHSKAHKQ-DTDFQEKASDEIYVSHLIVDYRCDKCGCSFDIESSLSSHHCK--NKNEREAMEIEGHEILGENKSFRKR
        MDDKS+PYNLRLRKDHK+S+ TE SK  KQ + +FQEK  +E+     +  Y CDKCGCSFD++ SL SHHCK  NK+E+EAME E  E LG++KS RKR
Subjt:  MDDKSLPYNLRLRKDHKSSSPTEHSKAHKQ-DTDFQEKASDEIYVSHLIVDYRCDKCGCSFDIESSLSSHHCK--NKNEREAMEIEGHEILGENKSFRKR

Query:  SRKGIPRRAPF
        +RKGIP RAPF
Subjt:  SRKGIPRRAPF

KAG7011182.1 hypothetical protein SDJN02_27980, partial [Cucurbita argyrosperma subsp. argyrosperma]9.3e-2662.16Show/hide
Query:  MDDKSLPYNLRLRKDHKSSSPTEHSKAHKQ-DTDFQEKASDEIYVSHLIVDYRCDKCGCSFDIESSLSSHHCK--NKNEREAMEIEGHEILGENKSFRKR
        MD+KS+PYNLRLRKDHK+S+ TE SK  KQ + +FQEK  +E+     +  Y CDKCGCSFD++ SL SHHCK  NK+E+EAME E  E LG++KS RKR
Subjt:  MDDKSLPYNLRLRKDHKSSSPTEHSKAHKQ-DTDFQEKASDEIYVSHLIVDYRCDKCGCSFDIESSLSSHHCK--NKNEREAMEIEGHEILGENKSFRKR

Query:  SRKGIPRRAPF
        +RKGIP RAPF
Subjt:  SRKGIPRRAPF

XP_022928048.1 uncharacterized protein LOC111434950 [Cucurbita moschata]1.9e-2662.5Show/hide
Query:  MDDKSLPYNLRLRKDHKSSSPTEHSKAHKQ-DTDFQEKASDEIYVSHLIVDYRCDKCGCSFDIESSLSSHHCK--NKNEREAMEIEGHEILGENKSFRKR
        MD+KS+PYNLRLRKDHK+S+ TE SK  KQ + +FQEK  +E+     +  Y CDKCGCSFD++ SL SHHCK  NK+EREA E E  E LG++KS RKR
Subjt:  MDDKSLPYNLRLRKDHKSSSPTEHSKAHKQ-DTDFQEKASDEIYVSHLIVDYRCDKCGCSFDIESSLSSHHCK--NKNEREAMEIEGHEILGENKSFRKR

Query:  SRKGIPRRAPFF
        +RKGIP RAPFF
Subjt:  SRKGIPRRAPFF

XP_023511836.1 uncharacterized protein LOC111776737 [Cucurbita pepo subsp. pepo]8.4e-2763.39Show/hide
Query:  MDDKSLPYNLRLRKDHKSSSPTEHSKAHKQ-DTDFQEKASDEIYVSHLIVDYRCDKCGCSFDIESSLSSHHCK--NKNEREAMEIEGHEILGENKSFRKR
        MDDKS+PYNLRLRKDHK+S+ TE SK  KQ + +FQEK  +E+     +  Y CDKCGCSFD++ SL SHHCK  NK+E+EAME E  E LG++KS RKR
Subjt:  MDDKSLPYNLRLRKDHKSSSPTEHSKAHKQ-DTDFQEKASDEIYVSHLIVDYRCDKCGCSFDIESSLSSHHCK--NKNEREAMEIEGHEILGENKSFRKR

Query:  SRKGIPRRAPFF
        +RKGIP RAPFF
Subjt:  SRKGIPRRAPFF

TrEMBL top hitse value%identityAlignment
A0A0A0LQ06 C2H2-type domain-containing protein1.3e-4991.82Show/hide
Query:  MDDKSLPYNLRLRKDHKSSSPTEHSKAHKQDTDFQEKAS-DEIYVSHLIVDYRCDKCGCSFDIESSLSSHHCKNKNEREAMEIEGHEILGENKSFRKRSR
        MDDKSLPYNLRLRKDHKSSSPTEHSK HK D DFQEKAS D+IYVSHLIVDYRC+KCGCSFDIESSLSSHHCKNKNEREAMEIEGH ILGENKSFRK+SR
Subjt:  MDDKSLPYNLRLRKDHKSSSPTEHSKAHKQDTDFQEKAS-DEIYVSHLIVDYRCDKCGCSFDIESSLSSHHCKNKNEREAMEIEGHEILGENKSFRKRSR

Query:  KGIPRRAPFF
        KG+PRRAPFF
Subjt:  KGIPRRAPFF

A0A6J1D739 uncharacterized protein LOC1110179591.4e-1956.41Show/hide
Query:  MDDKSLPYNLRLRKDHKSSSPTEHSKAH-KQDTDFQEKASDEIYVSHLIVDYRCDKCGCSFDIESSLSSHHCKNKNEREAMEIEGH---EILGEN----K
        MDDKSLPYNLRLR   K+S+PTE SK + K + DFQEK  +EI      ++ RC+KCGC F IE SL SHHCK KN+     +E     E+L +N    K
Subjt:  MDDKSLPYNLRLRKDHKSSSPTEHSKAH-KQDTDFQEKASDEIYVSHLIVDYRCDKCGCSFDIESSLSSHHCKNKNEREAMEIEGH---EILGEN----K

Query:  SFRKRSRKGIPRRAPFF
        SFRKRSRKGIP RAP F
Subjt:  SFRKRSRKGIPRRAPFF

A0A6J1EMR9 uncharacterized protein LOC1114349509.1e-2762.5Show/hide
Query:  MDDKSLPYNLRLRKDHKSSSPTEHSKAHKQ-DTDFQEKASDEIYVSHLIVDYRCDKCGCSFDIESSLSSHHCK--NKNEREAMEIEGHEILGENKSFRKR
        MD+KS+PYNLRLRKDHK+S+ TE SK  KQ + +FQEK  +E+     +  Y CDKCGCSFD++ SL SHHCK  NK+EREA E E  E LG++KS RKR
Subjt:  MDDKSLPYNLRLRKDHKSSSPTEHSKAHKQ-DTDFQEKASDEIYVSHLIVDYRCDKCGCSFDIESSLSSHHCK--NKNEREAMEIEGHEILGENKSFRKR

Query:  SRKGIPRRAPFF
        +RKGIP RAPFF
Subjt:  SRKGIPRRAPFF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGACAAATCTCTTCCTTATAATCTTCGACTTAGGAAAGATCACAAGTCTTCTTCTCCAACAGAACATTCCAAAGCTCATAAACAAGACACAGACTTTCAGGAAAA
GGCAAGTGATGAAATATATGTAAGTCATTTAATTGTGGATTATCGATGTGATAAATGTGGATGCTCTTTTGATATTGAATCCTCTCTTAGTTCACACCATTGTAAAAATA
AAAATGAGAGAGAGGCAATGGAAATTGAAGGACATGAAATTTTGGGAGAGAACAAATCATTCAGAAAAAGAAGCAGGAAGGGGATACCAAGAAGAGCACCTTTCTTTTAG
mRNA sequenceShow/hide mRNA sequence
TTATGAAAAAGATATCCATTTATTTTGATTTAGATTTATTGTGTTTGTAGAGATGAATTGAAACTTCAAAAAATGGATGACAAATCTCTTCCTTATAATCTTCGACTTAG
GAAAGATCACAAGTCTTCTTCTCCAACAGAACATTCCAAAGCTCATAAACAAGACACAGACTTTCAGGAAAAGGCAAGTGATGAAATATATGTAAGTCATTTAATTGTGG
ATTATCGATGTGATAAATGTGGATGCTCTTTTGATATTGAATCCTCTCTTAGTTCACACCATTGTAAAAATAAAAATGAGAGAGAGGCAATGGAAATTGAAGGACATGAA
ATTTTGGGAGAGAACAAATCATTCAGAAAAAGAAGCAGGAAGGGGATACCAAGAAGAGCACCTTTCTTTTAGATCAATTTTACTCTAATATTATTGATATTGAAATTCAT
TTTAGGTTTTTTAGATTTTGTGAATCTAAAATTTCATATTTAGAGT
Protein sequenceShow/hide protein sequence
MDDKSLPYNLRLRKDHKSSSPTEHSKAHKQDTDFQEKASDEIYVSHLIVDYRCDKCGCSFDIESSLSSHHCKNKNEREAMEIEGHEILGENKSFRKRSRKGIPRRAPFF