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Cmc11g0286771 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc11g0286771
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionCLK4-associating serine/arginine rich protein
Genome locationCMiso1.1chr11:1916979..1918089
RNA-Seq ExpressionCmc11g0286771
SyntenyCmc11g0286771
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004149706.3 CLK4-associating serine/arginine rich protein isoform X1 [Cucumis sativus]7.2e-3490.76Show/hide
Query:  MSQQLNKQIKKDTAAEMAKKREQERQRLEKLAETSRLNSRRHRSRSRSYSRSPRRRYRRSRSRSRSRSRGSRRYYSRSRSRSRSRSRSR---------SR
        MSQQLNKQIKKDTAAEMAKKREQERQRLEKLAETSRLNSRRHRSRSRSYSRSPRRRYRRSRSRSRSRSRGSRRYYSRSRSRSRSRSRS          SR
Subjt:  MSQQLNKQIKKDTAAEMAKKREQERQRLEKLAETSRLNSRRHRSRSRSYSRSPRRRYRRSRSRSRSRSRGSRRYYSRSRSRSRSRSRSR---------SR

Query:  SHSRSPYSRSPRVRTRTRY
        SHSRSPYSRSPRVR+RTRY
Subjt:  SHSRSPYSRSPRVRTRTRY

XP_008457790.1 PREDICTED: CLK4-associating serine/arginine rich protein isoform X1 [Cucumis melo]8.5e-3593.97Show/hide
Query:  MSQQLNKQIKKDTAAEMAKKREQERQRLEKLAETSRLNSRRHRSRSRSYSRSPRRRYRRSRSRSRSRSRGSRRYYSRSRSRSRSRSRSR------SRSHS
        MSQQLNKQIKKDTAAEMAKKREQERQRLEKLAETSRLNSRRHRSRSRSYSRSPRRRYRRSRSRSRSRSRGSRRYYSRSRSRSRSRS+SR      SRSHS
Subjt:  MSQQLNKQIKKDTAAEMAKKREQERQRLEKLAETSRLNSRRHRSRSRSYSRSPRRRYRRSRSRSRSRSRGSRRYYSRSRSRSRSRSRSR------SRSHS

Query:  RSPYSRSPRVRTRTRY
        RSPYSRSPRVRTRTRY
Subjt:  RSPYSRSPRVRTRTRY

XP_008457791.1 PREDICTED: CLK4-associating serine/arginine rich protein isoform X2 [Cucumis melo]8.5e-3593.97Show/hide
Query:  MSQQLNKQIKKDTAAEMAKKREQERQRLEKLAETSRLNSRRHRSRSRSYSRSPRRRYRRSRSRSRSRSRGSRRYYSRSRSRSRSRSRSR------SRSHS
        MSQQLNKQIKKDTAAEMAKKREQERQRLEKLAETSRLNSRRHRSRSRSYSRSPRRRYRRSRSRSRSRSRGSRRYYSRSRSRSRSRS+SR      SRSHS
Subjt:  MSQQLNKQIKKDTAAEMAKKREQERQRLEKLAETSRLNSRRHRSRSRSYSRSPRRRYRRSRSRSRSRSRGSRRYYSRSRSRSRSRSRSR------SRSHS

Query:  RSPYSRSPRVRTRTRY
        RSPYSRSPRVRTRTRY
Subjt:  RSPYSRSPRVRTRTRY

XP_031736372.1 CLK4-associating serine/arginine rich protein isoform X2 [Cucumis sativus]7.2e-3490.76Show/hide
Query:  MSQQLNKQIKKDTAAEMAKKREQERQRLEKLAETSRLNSRRHRSRSRSYSRSPRRRYRRSRSRSRSRSRGSRRYYSRSRSRSRSRSRSR---------SR
        MSQQLNKQIKKDTAAEMAKKREQERQRLEKLAETSRLNSRRHRSRSRSYSRSPRRRYRRSRSRSRSRSRGSRRYYSRSRSRSRSRSRS          SR
Subjt:  MSQQLNKQIKKDTAAEMAKKREQERQRLEKLAETSRLNSRRHRSRSRSYSRSPRRRYRRSRSRSRSRSRGSRRYYSRSRSRSRSRSRSR---------SR

Query:  SHSRSPYSRSPRVRTRTRY
        SHSRSPYSRSPRVR+RTRY
Subjt:  SHSRSPYSRSPRVRTRTRY

XP_038901180.1 CLK4-associating serine/arginine rich protein isoform X1 [Benincasa hispida]5.7e-3192.17Show/hide
Query:  MSQQLNKQIKKDTAAEMAKKREQERQRLEKLAETSRLNSRRHRSRSRSYSRSPRRRYRRSRSRSRSRSRGSRRYY----SRSRSRSRSRSRSRSRSHSRS
        MSQQLNKQIKKDTAAEMAKKREQERQRLEKLAETSRLNS RHRSRSRSYSRSPRRRYR  RSRSRSRSRGSRRYY    SRSRSRSRSRSRSRSRSHSRS
Subjt:  MSQQLNKQIKKDTAAEMAKKREQERQRLEKLAETSRLNSRRHRSRSRSYSRSPRRRYRRSRSRSRSRSRGSRRYY----SRSRSRSRSRSRSRSRSHSRS

Query:  P-YSRSPRVRTRTRY
        P YSRSPRVR+RTRY
Subjt:  P-YSRSPRVRTRTRY

TrEMBL top hitse value%identityAlignment
A0A0A0LJB3 DRY_EERY domain-containing protein1.7e-3698.18Show/hide
Query:  MSQQLNKQIKKDTAAEMAKKREQERQRLEKLAETSRLNSRRHRSRSRSYSRSPRRRYRRSRSRSRSRSRGSRRYYSRSRSRSRSRSRSRSRSHSRSPYSR
        MSQQLNKQIKKDTAAEMAKKREQERQRLEKLAETSRLNSRRHRSRSRSYSRSPRRRYRRSRSRSRSRSRGSRRYYSRSRSRSRSRSRS SRSHSRSPYSR
Subjt:  MSQQLNKQIKKDTAAEMAKKREQERQRLEKLAETSRLNSRRHRSRSRSYSRSPRRRYRRSRSRSRSRSRGSRRYYSRSRSRSRSRSRSRSRSHSRSPYSR

Query:  SPRVRTRTRY
        SPRVR+RTRY
Subjt:  SPRVRTRTRY

A0A1S3C6Z9 CLK4-associating serine/arginine rich protein isoform X14.1e-3593.97Show/hide
Query:  MSQQLNKQIKKDTAAEMAKKREQERQRLEKLAETSRLNSRRHRSRSRSYSRSPRRRYRRSRSRSRSRSRGSRRYYSRSRSRSRSRSRSR------SRSHS
        MSQQLNKQIKKDTAAEMAKKREQERQRLEKLAETSRLNSRRHRSRSRSYSRSPRRRYRRSRSRSRSRSRGSRRYYSRSRSRSRSRS+SR      SRSHS
Subjt:  MSQQLNKQIKKDTAAEMAKKREQERQRLEKLAETSRLNSRRHRSRSRSYSRSPRRRYRRSRSRSRSRSRGSRRYYSRSRSRSRSRSRSR------SRSHS

Query:  RSPYSRSPRVRTRTRY
        RSPYSRSPRVRTRTRY
Subjt:  RSPYSRSPRVRTRTRY

A0A1S3C7M4 CLK4-associating serine/arginine rich protein isoform X24.1e-3593.97Show/hide
Query:  MSQQLNKQIKKDTAAEMAKKREQERQRLEKLAETSRLNSRRHRSRSRSYSRSPRRRYRRSRSRSRSRSRGSRRYYSRSRSRSRSRSRSR------SRSHS
        MSQQLNKQIKKDTAAEMAKKREQERQRLEKLAETSRLNSRRHRSRSRSYSRSPRRRYRRSRSRSRSRSRGSRRYYSRSRSRSRSRS+SR      SRSHS
Subjt:  MSQQLNKQIKKDTAAEMAKKREQERQRLEKLAETSRLNSRRHRSRSRSYSRSPRRRYRRSRSRSRSRSRGSRRYYSRSRSRSRSRSRSR------SRSHS

Query:  RSPYSRSPRVRTRTRY
        RSPYSRSPRVRTRTRY
Subjt:  RSPYSRSPRVRTRTRY

A0A6J1G6C5 CLK4-associating serine/arginine rich protein isoform X14.0e-3091.89Show/hide
Query:  MSQQLNKQIKKDTAAEMAKKREQERQRLEKLAETSRLNSRRHRSRSRSYSRSPRRRYRRSRSRSRSRSRGSRRYYSRSRSRSRSRSRSRSRSHSRSP-YS
        MSQQLNKQIKKDTAAEMAKKREQERQRLEKLAETSRLNS R RSRSRSYSRSPRRRYR  RSRSRSRSRGSRRYYSRSRSRSRS SRS SRSHSRSP YS
Subjt:  MSQQLNKQIKKDTAAEMAKKREQERQRLEKLAETSRLNSRRHRSRSRSYSRSPRRRYRRSRSRSRSRSRGSRRYYSRSRSRSRSRSRSRSRSHSRSP-YS

Query:  RSPRVRTRTRY
         SPRVR+RTRY
Subjt:  RSPRVRTRTRY

A0A6J1L1K6 CLK4-associating serine/arginine rich protein isoform X12.2e-2890Show/hide
Query:  MSQQLNKQIKKDTAAEMAKKREQERQRLEKLAETSRLNSRRHRSRSRSYSRSPRRRYRRSRSRSRSRSRGSRRYYSRSRSRSRSRSRSRSRSHSRSPYSR
        MSQQLNKQIKKDTAAEMAKKREQERQRLEKLAETSRLNS R RSRSRSYSRSPRRRY  SRSRSRSRSRGSRRYYSRSRSRSRSRSRS SRSHSRSP   
Subjt:  MSQQLNKQIKKDTAAEMAKKREQERQRLEKLAETSRLNSRRHRSRSRSYSRSPRRRYRRSRSRSRSRSRGSRRYYSRSRSRSRSRSRSRSRSHSRSPYSR

Query:  SPRVRTRTRY
          RVR+RTRY
Subjt:  SPRVRTRTRY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G36980.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Splicing factor, suppressor of white apricot (InterPro:IPR019147); Has 7672 Blast hits to 5479 proteins in 321 species: Archae - 0; Bacteria - 89; Metazoa - 5155; Fungi - 712; Plants - 341; Viruses - 39; Other Eukaryotes - 1336 (source: NCBI BLink).1.2e-1873.91Show/hide
Query:  MSQQLNKQIKKDTAAEMAKKREQERQRLEKLAETSRLNSRRHRSRSRSYSRS-PRRRYRRSRSRSRSRSRGSRRYYSRSRSRSRSRSRSRS--RSHSRSP
        M++QL KQIKKD+A E AKKREQERQRLEKLAETSRL+  R RSRSRS SRS P RR+RRSRSRS SRSR SRR+ SRSRSRS SRS SRS  RS  RSP
Subjt:  MSQQLNKQIKKDTAAEMAKKREQERQRLEKLAETSRLNSRRHRSRSRSYSRS-PRRRYRRSRSRSRSRSRGSRRYYSRSRSRSRSRSRSRS--RSHSRSP

Query:  -YSRSPRVR-TRTRY
         YSRSPR R +R+R+
Subjt:  -YSRSPRVR-TRTRY

AT4G36980.2 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Splicing factor, suppressor of white apricot (InterPro:IPR019147); Has 5391 Blast hits to 4388 proteins in 280 species: Archae - 1; Bacteria - 114; Metazoa - 3014; Fungi - 666; Plants - 308; Viruses - 14; Other Eukaryotes - 1274 (source: NCBI BLink).2.6e-1076.79Show/hide
Query:  MSQQLNKQIKKDTAAEMAKKREQERQRLEKLAETSRLNSRRHRSRSRSYSRSPRRR
        M++QL KQIKKD+A E AKKREQERQRLEKLAETSRL+  R RSRSRS SRSP  R
Subjt:  MSQQLNKQIKKDTAAEMAKKREQERQRLEKLAETSRLNSRRHRSRSRSYSRSPRRR

AT4G36980.3 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Splicing factor, suppressor of white apricot (InterPro:IPR019147).1.2e-1873.91Show/hide
Query:  MSQQLNKQIKKDTAAEMAKKREQERQRLEKLAETSRLNSRRHRSRSRSYSRS-PRRRYRRSRSRSRSRSRGSRRYYSRSRSRSRSRSRSRS--RSHSRSP
        M++QL KQIKKD+A E AKKREQERQRLEKLAETSRL+  R RSRSRS SRS P RR+RRSRSRS SRSR SRR+ SRSRSRS SRS SRS  RS  RSP
Subjt:  MSQQLNKQIKKDTAAEMAKKREQERQRLEKLAETSRLNSRRHRSRSRSYSRS-PRRRYRRSRSRSRSRSRGSRRYYSRSRSRSRSRSRSRS--RSHSRSP

Query:  -YSRSPRVR-TRTRY
         YSRSPR R +R+R+
Subjt:  -YSRSPRVR-TRTRY

AT4G36980.4 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Splicing factor, suppressor of white apricot (InterPro:IPR019147).1.5e-1873.28Show/hide
Query:  MSQQLNKQIKKDTAAEMAKKREQERQRLEKLAETSRLNSRRHRSRSRSYSRS--PRRRYRRSRSRSRSRSRGSRRYYSRSRSRSRSRSRSRS--RSHSRS
        M++QL KQIKKD+A E AKKREQERQRLEKLAETSRL+  R RSRSRS SRS  PR R+RRSRSRS SRSR SRR+ SRSRSRS SRS SRS  RS  RS
Subjt:  MSQQLNKQIKKDTAAEMAKKREQERQRLEKLAETSRLNSRRHRSRSRSYSRS--PRRRYRRSRSRSRSRSRGSRRYYSRSRSRSRSRSRSRS--RSHSRS

Query:  P-YSRSPRVR-TRTRY
        P YSRSPR R +R+R+
Subjt:  P-YSRSPRVR-TRTRY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTCAACAGCTCAATAAACAAATTAAGAAAGATACAGCTGCAGAAATGGCTAAAAAGAGGGAGCAGGAGCGCCAGAGACTGGAAAAGCTAGCAGAAACTAGC
CGATTAAATAGTCGTAGGCATCGGAGCCGCAGCAGAAGCTACAGCCGTTCACCAAGAAGAAGATACCGCCGTAGTAGAAGTAGGAGTAGAAGTAGAAGTAGAGGG
TCACGAAGATATTATTCTCGTTCCCGATCTCGTTCTCGGTCTCGGTCTCGCTCCCGCTCTCGAAGCCATTCTCGTTCACCTTACTCTCGTTCACCAAGGGTCAGA
ACTCGTACAAGATATTAA
mRNA sequenceShow/hide mRNA sequence
GCACTTGCAAAGCTAACGAAGGCAAGTTCTTCCGGAGGGCCTTTAAAGCTGGGGGAAAAGAAAGAAACTCCGCAGGAACGACTTAAGAGGATCATGAGTCAACAG
CTCAATAAACAAATTAAGAAAGATACAGCTGCAGAAATGGCTAAAAAGAGGGAGCAGGAGCGCCAGAGACTGGAAAAGCTAGCAGAAACTAGCCGATTAAATAGT
CGTAGGCATCGGAGCCGCAGCAGAAGCTACAGCCGTTCACCAAGAAGAAGATACCGCCGTAGTAGAAGTAGGAGTAGAAGTAGAAGTAGAGGGTCACGAAGATAT
TATTCTCGTTCCCGATCTCGTTCTCGGTCTCGGTCTCGCTCCCGCTCTCGAAGCCATTCTCGTTCACCTTACTCTCGTTCACCAAGGGTCAGAACTCGTACAAGA
TATTAAGAAGGAGAAATGCTGAATCTTTTGTTGGATATTATTTCATTTTGATCATACTCTACTTCTTAGCGCTGAAAGTATATGTTATGTTTCTAAGCTTGGATG
GATGTATCATAATGCGAGCCTCGAATCAGTTCCTTCCTCGAGTATGTATTCATTTATATATTAGGTAAGAAATTTCAATGGTCTTAACATCTGGTACAAATTAGG
CCTAAGGCCTGGGGAAAAAACATAATTGCTTCGGACGTGCATTTTGTTTTTTCATTTATCTTAGCTCACATTCTAACTTCTTCCTTTCGGTGT
Protein sequenceShow/hide protein sequence
MSQQLNKQIKKDTAAEMAKKREQERQRLEKLAETSRLNSRRHRSRSRSYSRSPRRRYRRSRSRSRSRSRGSRRYYSRSRSRSRSRSRSRSRSHSRSPYSRSPRVR
TRTRY